Query 011689
Match_columns 479
No_of_seqs 309 out of 1684
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 04:09:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011689.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011689hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02813 pfkB-type carbohydrat 100.0 6.5E-57 1.4E-61 470.8 41.1 369 110-479 57-426 (426)
2 PLN02379 pfkB-type carbohydrat 100.0 4.9E-48 1.1E-52 397.4 36.8 329 120-461 17-358 (367)
3 PRK15074 inosine/guanosine kin 100.0 4.7E-48 1E-52 402.2 36.0 322 120-453 31-425 (434)
4 PLN02543 pfkB-type carbohydrat 100.0 1.1E-45 2.4E-50 389.1 35.9 328 113-465 118-494 (496)
5 PLN02967 kinase 100.0 2.7E-45 5.8E-50 389.6 37.0 334 99-457 175-544 (581)
6 cd01168 adenosine_kinase Adeno 100.0 8.8E-45 1.9E-49 365.6 36.1 309 123-446 2-311 (312)
7 PTZ00247 adenosine kinase; Pro 100.0 1.1E-44 2.3E-49 370.5 35.0 317 120-446 3-336 (345)
8 PRK11142 ribokinase; Provision 100.0 3.1E-43 6.6E-48 353.1 32.8 297 123-460 3-305 (306)
9 PLN02323 probable fructokinase 100.0 5E-43 1.1E-47 355.8 34.3 308 121-461 9-328 (330)
10 PTZ00292 ribokinase; Provision 100.0 3.4E-42 7.3E-47 349.1 34.0 303 121-459 14-325 (326)
11 PLN02341 pfkB-type carbohydrat 100.0 1.2E-41 2.6E-46 360.4 35.9 319 120-464 70-413 (470)
12 cd01944 YegV_kinase_like YegV- 100.0 1.4E-41 3E-46 338.5 31.9 287 124-443 1-289 (289)
13 cd01174 ribokinase Ribokinase 100.0 3.1E-41 6.6E-46 336.0 33.0 286 124-450 1-292 (292)
14 COG0524 RbsK Sugar kinases, ri 100.0 3.1E-41 6.6E-46 339.6 31.8 303 124-461 1-310 (311)
15 PLN02548 adenosine kinase 100.0 7.4E-41 1.6E-45 340.2 34.3 307 128-447 1-326 (332)
16 PRK09434 aminoimidazole ribosi 100.0 1.8E-40 3.8E-45 333.0 33.4 287 123-454 3-303 (304)
17 PRK09850 pseudouridine kinase; 100.0 3E-40 6.4E-45 333.1 32.7 300 119-460 1-308 (313)
18 cd01166 KdgK 2-keto-3-deoxyglu 100.0 3.3E-40 7.2E-45 328.7 31.1 286 124-444 1-293 (294)
19 KOG2855 Ribokinase [Carbohydra 100.0 1.2E-40 2.6E-45 327.0 26.7 310 121-462 8-328 (330)
20 cd01945 ribokinase_group_B Rib 100.0 4.2E-40 9E-45 326.7 30.4 282 124-450 1-284 (284)
21 cd01167 bac_FRK Fructokinases 100.0 6.8E-40 1.5E-44 326.7 30.7 282 124-444 1-294 (295)
22 cd01942 ribokinase_group_A Rib 100.0 8.9E-40 1.9E-44 323.4 30.8 274 124-445 1-279 (279)
23 KOG2854 Possible pfkB family c 100.0 4.6E-40 9.9E-45 318.9 27.8 312 125-446 9-336 (343)
24 PF00294 PfkB: pfkB family car 100.0 1E-39 2.2E-44 325.8 25.2 292 122-450 1-300 (301)
25 TIGR02152 D_ribokin_bact ribok 100.0 1.6E-38 3.5E-43 316.9 31.9 286 129-454 1-292 (293)
26 cd01940 Fructoselysine_kinase_ 100.0 1.1E-38 2.4E-43 313.4 30.2 262 124-445 1-264 (264)
27 cd01947 Guanosine_kinase_like 100.0 1.3E-38 2.8E-43 313.2 30.2 265 124-445 1-265 (265)
28 TIGR03828 pfkB 1-phosphofructo 100.0 7.1E-38 1.5E-42 313.7 33.3 289 127-460 4-301 (304)
29 cd01939 Ketohexokinase Ketohex 100.0 1.8E-38 3.9E-43 316.5 28.7 275 124-444 1-289 (290)
30 cd01172 RfaE_like RfaE encodes 100.0 2.1E-38 4.6E-43 317.5 28.8 287 124-449 1-299 (304)
31 PRK13508 tagatose-6-phosphate 100.0 3.9E-37 8.5E-42 309.8 34.3 291 125-460 3-303 (309)
32 PRK09954 putative kinase; Prov 100.0 2.6E-37 5.6E-42 317.9 33.1 299 118-459 53-360 (362)
33 cd01943 MAK32 MAK32 kinase. M 100.0 2.4E-38 5.2E-43 321.3 25.0 279 124-444 1-304 (328)
34 PRK10294 6-phosphofructokinase 100.0 9.4E-37 2E-41 307.0 33.5 292 125-459 4-305 (309)
35 TIGR02198 rfaE_dom_I rfaE bifu 100.0 5.5E-37 1.2E-41 309.1 31.6 295 122-459 7-315 (315)
36 PRK09513 fruK 1-phosphofructok 100.0 1.7E-36 3.6E-41 305.6 34.9 291 125-460 5-305 (312)
37 PRK09813 fructoselysine 6-kina 100.0 3.7E-37 8.1E-42 302.4 27.9 257 123-444 1-259 (260)
38 TIGR01231 lacC tagatose-6-phos 100.0 2.6E-36 5.6E-41 303.8 33.9 293 126-460 3-303 (309)
39 TIGR03168 1-PFK hexose kinase, 100.0 2.7E-36 5.8E-41 302.6 31.0 287 129-460 6-301 (303)
40 cd01941 YeiC_kinase_like YeiC- 100.0 2.1E-36 4.6E-41 300.6 29.5 276 125-440 2-287 (288)
41 cd01164 FruK_PfkB_like 1-phosp 100.0 1.5E-35 3.2E-40 295.2 29.8 277 125-444 3-288 (289)
42 PRK11316 bifunctional heptose 100.0 1.8E-35 3.8E-40 314.7 29.7 299 121-460 9-314 (473)
43 PLN02630 pfkB-type carbohydrat 100.0 6.6E-34 1.4E-38 288.5 31.7 270 122-460 11-291 (335)
44 COG1105 FruK Fructose-1-phosph 100.0 1.4E-33 3E-38 277.2 29.9 287 129-460 7-303 (310)
45 cd01937 ribokinase_group_D Rib 100.0 8.8E-34 1.9E-38 277.1 28.1 252 124-440 1-254 (254)
46 cd01946 ribokinase_group_C Rib 100.0 3.1E-33 6.8E-38 277.0 28.0 266 125-445 2-276 (277)
47 COG2870 RfaE ADP-heptose synth 100.0 8.4E-30 1.8E-34 252.2 24.5 300 121-461 9-314 (467)
48 KOG2947 Carbohydrate kinase [C 99.9 1.7E-26 3.7E-31 214.3 20.8 282 121-444 3-298 (308)
49 cd00287 ribokinase_pfkB_like r 99.9 9.5E-26 2.1E-30 210.9 20.9 192 124-418 1-196 (196)
50 PRK12412 pyridoxal kinase; Rev 99.7 2.7E-16 5.8E-21 155.4 21.7 221 206-441 4-246 (268)
51 PRK05756 pyridoxamine kinase; 99.7 1.7E-16 3.8E-21 158.2 17.9 164 275-441 72-255 (286)
52 cd01173 pyridoxal_pyridoxamine 99.7 1.8E-16 3.8E-21 155.3 17.3 162 276-440 71-250 (254)
53 TIGR00687 pyridox_kin pyridoxa 99.7 2.2E-16 4.8E-21 157.4 18.2 162 275-439 72-254 (286)
54 cd01169 HMPP_kinase 4-amino-5- 99.7 1.2E-15 2.7E-20 148.0 19.7 158 277-440 68-240 (242)
55 PRK06427 bifunctional hydroxy- 99.7 9.2E-16 2E-20 151.3 18.3 160 277-442 73-249 (266)
56 TIGR00097 HMP-P_kinase phospho 99.7 1.5E-15 3.2E-20 148.9 19.4 159 277-441 67-240 (254)
57 PRK08176 pdxK pyridoxal-pyrido 99.7 1.7E-15 3.7E-20 150.7 18.2 163 275-441 86-266 (281)
58 PRK07105 pyridoxamine kinase; 99.7 8.6E-16 1.9E-20 153.1 15.8 163 277-443 75-257 (284)
59 PRK12413 phosphomethylpyrimidi 99.7 7.7E-16 1.7E-20 150.7 14.8 221 204-442 4-243 (253)
60 PRK08573 phosphomethylpyrimidi 99.6 3.4E-15 7.4E-20 157.8 17.8 146 294-440 83-243 (448)
61 PRK12616 pyridoxal kinase; Rev 99.6 9.4E-15 2E-19 144.6 17.0 159 277-441 74-249 (270)
62 PTZ00344 pyridoxal kinase; Pro 99.5 2.1E-12 4.6E-17 129.5 18.5 159 280-442 79-259 (296)
63 KOG3009 Predicted carbohydrate 99.5 7.5E-13 1.6E-17 133.5 13.9 235 125-439 343-598 (614)
64 PLN02898 HMP-P kinase/thiamin- 99.5 2.5E-12 5.4E-17 138.1 19.0 160 277-442 78-254 (502)
65 PTZ00347 phosphomethylpyrimidi 99.4 1.5E-12 3.3E-17 139.8 16.7 162 273-441 293-478 (504)
66 cd01171 YXKO-related B.subtili 99.4 2.4E-12 5.1E-17 126.1 16.2 160 273-442 73-236 (254)
67 PF08543 Phos_pyr_kin: Phospho 99.3 2.6E-11 5.6E-16 118.4 16.0 158 277-440 60-233 (246)
68 PRK09517 multifunctional thiam 99.3 1.7E-11 3.7E-16 137.3 16.4 159 277-441 310-484 (755)
69 PLN02978 pyridoxal kinase 99.3 6.1E-11 1.3E-15 119.5 18.3 160 278-441 87-267 (308)
70 cd01170 THZ_kinase 4-methyl-5- 99.3 6.8E-11 1.5E-15 115.1 17.3 167 269-440 41-221 (242)
71 PRK14713 multifunctional hydro 99.3 5.4E-11 1.2E-15 128.5 17.9 158 277-439 98-270 (530)
72 TIGR00196 yjeF_cterm yjeF C-te 99.3 9.4E-11 2E-15 116.2 17.5 176 273-462 88-270 (272)
73 COG0351 ThiD Hydroxymethylpyri 99.3 1.2E-10 2.5E-15 112.8 15.8 157 278-440 73-244 (263)
74 COG2240 PdxK Pyridoxal/pyridox 99.1 2.1E-09 4.5E-14 104.7 15.2 163 274-441 70-250 (281)
75 PRK09355 hydroxyethylthiazole 98.9 3.8E-08 8.1E-13 97.1 17.4 164 271-439 48-224 (263)
76 PTZ00493 phosphomethylpyrimidi 98.9 2.2E-08 4.7E-13 100.8 15.5 158 278-441 74-285 (321)
77 TIGR00694 thiM hydroxyethylthi 98.8 1.1E-07 2.4E-12 93.1 16.5 163 271-438 43-218 (249)
78 KOG2599 Pyridoxal/pyridoxine/p 98.3 6.7E-06 1.5E-10 78.9 12.5 159 275-436 79-258 (308)
79 PRK14039 ADP-dependent glucoki 98.0 0.0011 2.4E-08 69.5 21.8 168 173-352 85-295 (453)
80 PRK03979 ADP-specific phosphof 98.0 0.0011 2.5E-08 69.6 21.2 215 123-351 13-306 (463)
81 PF02110 HK: Hydroxyethylthiaz 97.9 0.00063 1.4E-08 66.1 16.9 154 272-432 44-212 (246)
82 TIGR02045 P_fruct_ADP ADP-spec 97.8 0.0019 4.1E-08 67.6 20.2 162 176-350 86-291 (446)
83 KOG2598 Phosphomethylpyrimidin 97.8 0.0006 1.3E-08 69.7 14.3 159 277-440 92-282 (523)
84 PF01256 Carb_kinase: Carbohyd 97.6 0.0028 6.1E-08 61.7 16.4 151 272-434 62-215 (242)
85 PRK10565 putative carbohydrate 97.6 0.0022 4.9E-08 69.1 17.0 146 274-433 317-467 (508)
86 COG2145 ThiM Hydroxyethylthiaz 97.5 0.0058 1.3E-07 59.1 16.5 148 272-422 50-209 (265)
87 KOG3974 Predicted sugar kinase 97.2 0.006 1.3E-07 58.8 12.3 171 269-443 93-269 (306)
88 PF04587 ADP_PFK_GK: ADP-speci 96.6 0.017 3.7E-07 61.3 10.9 162 177-351 93-292 (444)
89 PRK14038 ADP-dependent glucoki 96.1 0.51 1.1E-05 49.8 18.7 164 175-351 106-300 (453)
90 COG0063 Predicted sugar kinase 95.9 0.34 7.3E-06 48.3 15.5 174 274-462 98-281 (284)
91 cd01938 ADPGK_ADPPFK ADP-depen 94.0 0.85 1.8E-05 48.3 13.1 167 173-351 100-286 (445)
92 PF09026 CENP-B_dimeris: Centr 88.3 0.14 3.1E-06 41.7 0.0 20 80-99 8-27 (101)
93 PRK10076 pyruvate formate lyas 83.0 9 0.0002 36.5 9.4 70 277-353 38-112 (213)
94 KOG4184 Predicted sugar kinase 74.9 10 0.00022 38.6 7.1 164 172-352 136-318 (478)
95 KOG1832 HIV-1 Vpr-binding prot 66.0 2.9 6.2E-05 47.2 1.2 17 86-102 1401-1417(1516)
96 PF09026 CENP-B_dimeris: Centr 62.4 2.5 5.4E-05 34.6 0.0 18 85-102 9-26 (101)
97 COG1180 PflA Pyruvate-formate 62.0 71 0.0015 31.4 10.2 71 277-354 83-158 (260)
98 COG4809 Archaeal ADP-dependent 53.3 2.9E+02 0.0063 28.9 14.9 81 272-353 220-310 (466)
99 COG0269 SgbH 3-hexulose-6-phos 50.6 1.1E+02 0.0025 29.2 8.9 91 276-377 79-172 (217)
100 PRK15447 putative protease; Pr 49.9 2.4E+02 0.0053 28.2 11.9 74 277-350 28-104 (301)
101 PF06524 NOA36: NOA36 protein; 49.6 21 0.00046 34.8 3.9 23 24-46 216-238 (314)
102 COG1618 Predicted nucleotide k 46.4 2E+02 0.0042 26.6 9.3 111 203-315 7-137 (179)
103 PRK00278 trpC indole-3-glycero 42.5 3.4E+02 0.0073 26.6 11.8 67 269-346 125-191 (260)
104 PF02084 Bindin: Bindin; Inte 41.5 4.4 9.5E-05 38.4 -2.0 32 187-226 132-163 (238)
105 PF01118 Semialdhyde_dh: Semia 39.5 47 0.001 28.2 4.3 40 271-318 60-99 (121)
106 PF02044 Bombesin: Bombesin-li 36.3 9.9 0.00022 19.8 -0.3 9 47-55 5-13 (14)
107 KOG0943 Predicted ubiquitin-pr 34.5 24 0.00053 41.4 2.0 11 400-410 2106-2116(3015)
108 PRK05967 cystathionine beta-ly 32.8 4.1E+02 0.0088 27.8 10.8 40 276-316 148-187 (395)
109 PRK08133 O-succinylhomoserine 31.7 3.2E+02 0.007 28.3 9.9 20 297-316 165-184 (390)
110 PF00919 UPF0004: Uncharacteri 31.7 1.6E+02 0.0034 24.3 6.1 60 276-340 35-97 (98)
111 PRK06702 O-acetylhomoserine am 30.3 3.7E+02 0.0081 28.5 10.1 104 173-316 78-185 (432)
112 PRK09028 cystathionine beta-ly 29.9 4.7E+02 0.01 27.3 10.7 39 276-316 145-184 (394)
113 PRK07050 cystathionine beta-ly 28.9 5.9E+02 0.013 26.4 11.2 103 173-316 82-188 (394)
114 TIGR02494 PFLE_PFLC glycyl-rad 27.9 4.2E+02 0.0092 26.0 9.6 67 279-352 127-198 (295)
115 cd00614 CGS_like CGS_like: Cys 27.5 4.1E+02 0.0088 27.2 9.7 39 277-316 125-163 (369)
116 PRK04169 geranylgeranylglycery 27.3 2.5E+02 0.0054 27.1 7.5 41 275-318 30-70 (232)
117 PRK05968 hypothetical protein; 26.8 7.2E+02 0.016 25.7 11.9 41 275-316 145-185 (389)
118 cd01483 E1_enzyme_family Super 26.4 4E+02 0.0088 22.9 8.2 18 177-194 6-23 (143)
119 PHA00438 hypothetical protein 26.3 48 0.001 26.2 1.8 17 402-418 46-62 (81)
120 PF04131 NanE: Putative N-acet 26.2 5.5E+02 0.012 24.1 10.8 57 276-342 63-119 (192)
121 PF04230 PS_pyruv_trans: Polys 26.0 1.5E+02 0.0033 27.7 5.9 128 210-344 2-136 (286)
122 PRK06444 prephenate dehydrogen 25.8 2.6E+02 0.0057 26.2 7.2 26 203-230 2-27 (197)
123 PRK07582 cystathionine gamma-l 25.6 3.8E+02 0.0083 27.4 9.1 19 297-315 151-169 (366)
124 PRK06728 aspartate-semialdehyd 24.4 4.6E+02 0.0099 27.0 9.1 92 202-317 6-100 (347)
125 TIGR00334 5S_RNA_mat_M5 ribonu 24.1 2.8E+02 0.006 25.7 6.7 64 277-347 22-85 (174)
126 PRK08134 O-acetylhomoserine am 23.8 5.9E+02 0.013 26.9 10.2 59 276-342 148-207 (433)
127 cd01485 E1-1_like Ubiquitin ac 23.8 5.9E+02 0.013 23.6 10.0 37 272-314 108-144 (198)
128 PF01212 Beta_elim_lyase: Beta 23.3 2.1E+02 0.0046 28.5 6.4 41 277-317 124-167 (290)
129 PRK05671 aspartate-semialdehyd 22.7 4.8E+02 0.01 26.6 9.0 91 203-317 6-98 (336)
130 PF05756 S-antigen: S-antigen 22.5 41 0.00089 26.5 0.9 30 82-111 54-84 (94)
131 COG1646 Predicted phosphate-bi 22.5 3.4E+02 0.0073 26.4 7.1 63 275-351 39-106 (240)
132 KOG3375 Phosphoprotein/predict 22.3 35 0.00075 30.3 0.5 17 48-64 3-19 (174)
133 PF04931 DNA_pol_phi: DNA poly 22.2 55 0.0012 37.6 2.2 11 31-41 607-617 (784)
134 PF10911 DUF2717: Protein of u 22.2 64 0.0014 25.4 1.8 19 401-419 45-63 (77)
135 TIGR01325 O_suc_HS_sulf O-succ 22.0 6.5E+02 0.014 25.8 10.0 39 277-316 139-177 (380)
136 PRK15452 putative protease; Pr 21.9 8.5E+02 0.018 26.0 10.9 45 272-316 18-67 (443)
137 cd00757 ThiF_MoeB_HesA_family 21.8 6.9E+02 0.015 23.6 9.6 22 173-194 24-45 (228)
138 PF04016 DUF364: Domain of unk 21.8 1.3E+02 0.0029 26.7 4.1 45 269-317 54-98 (147)
139 PF00070 Pyr_redox: Pyridine n 21.8 1.9E+02 0.0041 22.2 4.6 44 181-232 10-59 (80)
140 PLN02383 aspartate semialdehyd 21.6 5E+02 0.011 26.6 8.9 92 203-318 9-102 (344)
141 TIGR01328 met_gam_lyase methio 21.4 6.3E+02 0.014 26.1 9.8 39 277-316 144-182 (391)
142 PRK14874 aspartate-semialdehyd 21.4 5.6E+02 0.012 25.9 9.2 90 203-317 3-95 (334)
143 PRK08248 O-acetylhomoserine am 21.0 6.2E+02 0.013 26.7 9.7 38 277-316 149-187 (431)
144 PF04587 ADP_PFK_GK: ADP-speci 20.7 1E+02 0.0022 32.9 3.7 29 389-417 414-443 (444)
145 TIGR02491 NrdG anaerobic ribon 20.6 2.1E+02 0.0045 25.5 5.2 63 279-341 65-128 (154)
146 PRK08249 cystathionine gamma-s 20.1 5.3E+02 0.012 26.8 8.9 38 277-316 149-187 (398)
147 COG2518 Pcm Protein-L-isoaspar 20.1 7.6E+02 0.017 23.5 9.5 91 177-313 78-168 (209)
No 1
>PLN02813 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=6.5e-57 Score=470.77 Aligned_cols=369 Identities=77% Similarity=1.226 Sum_probs=330.2
Q ss_pred ccccCCCCCCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHH
Q 011689 110 EEISGSASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVAL 189 (479)
Q Consensus 110 ~~~~~~~~~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~al 189 (479)
+....+....+++++|+++|++++|++..++.+|++++.+++++.++++.++..++.+++.+..+...+||++.|+|++|
T Consensus 57 ~~~~~~~~~~~~~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~Aval 136 (426)
T PLN02813 57 GFGPIPEKAVPERWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVAL 136 (426)
T ss_pred ccCCCCcccCCCcceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHH
Confidence 45567777778999999999999999999999999999999999999999999999888888889999999999999999
Q ss_pred HHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCCh
Q 011689 190 ARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDP 269 (479)
Q Consensus 190 a~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~ 269 (479)
++||.+++.+++.++.|+|.||+|.+|+++++.|++.||++.++.+.+.+|+.++++++++|+|+++.++|++..+++++
T Consensus 137 arLG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~~~~Tg~~~ilv~~~gertii~~~Ga~~~l~~~~ 216 (426)
T PLN02813 137 ARLGSQSAAGPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDS 216 (426)
T ss_pred HHhccccccCCCCcEEEEEEeCCChHHHHHHHHHHHcCCcccceecCCCCceEEEEEEcCCCCceeeeccCchhhCCccc
Confidence 99994222223338999999999999999999999999999887766779999999999999999999999887777766
Q ss_pred hhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 270 CLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 270 ~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
...+.+++++++|++|+.+..+...+.+.++++.++++|+++++|+++.......+..+++.+++++|++++|++|+..|
T Consensus 217 ~~~~~i~~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll~~vDil~~Ne~Ea~~l 296 (426)
T PLN02813 217 CLASAISKSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARAL 296 (426)
T ss_pred cCHHHHhcCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHHhcCCEEEeCHHHHHHH
Confidence 66677899999999998766665567888999999999999999998765444444556667778999999999999999
Q ss_pred hCCCCCCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC-ChHHHHH
Q 011689 350 CHFSSKESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV-SDLKGMG 428 (479)
Q Consensus 350 ~g~~~~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~-~~l~eAl 428 (479)
++....++.+.+.+.+.++++.||||+|++|++++.+++.+++|++++++||||||||+|+|||++++++|+ + +++|+
T Consensus 297 ~g~~~~~~~~~a~~~L~~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v~vVDTtGAGDAF~Agfl~~l~~G~~~-l~~al 375 (426)
T PLN02813 297 CGLGSEESPESATRYLSHFCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGILYGLLRGVSD-LRGMG 375 (426)
T ss_pred hCCCCCCCHHHHHHHHHcCCCEEEEEeCCCCeEEEECCEEEEeCCCCCCcccCCChHHHHHHHHHHHHHcCCCC-HHHHH
Confidence 986544566777777778899999999999999999999999999999999999999999999999999999 8 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHccccccccCCCcccccccCC
Q 011689 429 ALAARIAATVVGQQGTRLSVRHASELAESFAYRIKSSTVGSDISSDHISSL 479 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~~~~~~~~~~~~~~~~~~ 479 (479)
++|+++|+.+|++.|++.++|+++++.+.++.+++.+++++|++|+||||+
T Consensus 376 ~~A~a~Aa~~v~~~Ga~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (426)
T PLN02813 376 ELAARVAATVVGQQGTRLRVEDAVELAESFALHLDGSDMRSDVGSGHISNF 426 (426)
T ss_pred HHHHHHHHHHHcccCCCcCHHHHHHHHHHHHHHhccCcccccccCCccCCC
Confidence 999999999999999999999999999999999999999999999999986
No 2
>PLN02379 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=4.9e-48 Score=397.43 Aligned_cols=329 Identities=25% Similarity=0.394 Sum_probs=284.4
Q ss_pred CCCccEEEEc-CceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCC---------CceeecCchHHHHHHHH
Q 011689 120 PERWDVLGLG-QAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGC---------SYKAAAGGSLSNSLVAL 189 (479)
Q Consensus 120 ~~~~~IlviG-~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~---------~~~~~~GG~a~NvA~al 189 (479)
+++++|++|| ++++|+...++.+|++++++++|.+.+++.++..+++..+... .....+||++.|+|++|
T Consensus 17 ~~~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~l 96 (367)
T PLN02379 17 PRPPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGL 96 (367)
T ss_pred CCCCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHH
Confidence 5678899999 9999999999999999999999999999999999888877531 36788999999999999
Q ss_pred HH-hCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCC
Q 011689 190 AR-LGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD 268 (479)
Q Consensus 190 a~-LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~ 268 (479)
++ ||. ++.|+|+||+|.+|+++++.|++.||++..++..+.+|+.++++++++|+|++..+.++...++.+
T Consensus 97 a~~LG~--------~~~~ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~~~~Tg~~~v~v~~dgert~~~~lg~~~~l~~~ 168 (367)
T PLN02379 97 SAGFGV--------STGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGPTAQCVCLVDALGNRTMRPCLSSAVKLQAD 168 (367)
T ss_pred HHhcCC--------CEEEEEEeCCChhHHHHHHHHHHcCCCccCcccCCCCCceEEEEECCCCCccccCCccccccCChh
Confidence 96 999 899999999999999999999999999887766667899999999999999998888877777777
Q ss_pred hhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhc-ccCcEEEcCHHHHH
Q 011689 269 PCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVG-NYADIVFANSDEAR 347 (479)
Q Consensus 269 ~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll-~~~Dvl~~N~~Ea~ 347 (479)
++..+.+++++++|++ +.. .+ .+.+.++++.++++|+++++|+++.....+++..+++.+. .++|++++|++|+.
T Consensus 169 ~~~~~~~~~~~~v~v~-~~~-~~--~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r~~l~~ll~~~~vDilf~Ne~Ea~ 244 (367)
T PLN02379 169 ELTKEDFKGSKWLVLR-YGF-YN--LEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEAR 244 (367)
T ss_pred HCCHHHHhcCCEEEEE-ccc-CC--HHHHHHHHHHHHHcCCEEEEeccchhhhhhhhHHHHHHhhcCCccEEEcCHHHHH
Confidence 7777778999999998 533 33 5788899999999999999999876554444444444332 48999999999999
Q ss_pred HhhCCCCCCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCC-CCCCCccchhHHHHHHHHHHHHcCCChHHH
Q 011689 348 AFCHFSSKESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSP-CVPVDTCGAGDAYASGILYGILRGVSDLKG 426 (479)
Q Consensus 348 ~L~g~~~~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~l~e 426 (479)
.+++....++.+.+.+++..+++.+|||+|++|++++.+++.+++|+++ +++||||||||+|+|||++++++|++ +++
T Consensus 245 ~l~~~~~~~~~~~~~~~l~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~~~vVDTtGAGDaFaagfl~gl~~G~~-l~~ 323 (367)
T PLN02379 245 ELLRGEQESDPEAALEFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNAVDATGAGDLFASGFLYGLIKGLS-LEE 323 (367)
T ss_pred HHhcCCCCCCHHHHHHHHHhcCCEEEEEECCCCeEEEECCEEEEecCCCCCCcccCCChhHHHHHHHHHHHHCCCC-HHH
Confidence 9987543456777788888899999999999999999998889999987 47999999999999999999999998 999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 427 MGALAARIAATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 427 Al~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
|+++|+++|+.+|++.|++...+.++++.++++.+
T Consensus 324 a~~~g~~aAa~vi~~~G~~~~~~~~~~~~~~~~~~ 358 (367)
T PLN02379 324 CCKVGACSGGSVVRALGGEVTPENWQWMYKQMQLK 358 (367)
T ss_pred HHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHc
Confidence 99999999999999999987666666666666543
No 3
>PRK15074 inosine/guanosine kinase; Provisional
Probab=100.00 E-value=4.7e-48 Score=402.22 Aligned_cols=322 Identities=24% Similarity=0.332 Sum_probs=272.8
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCC--ceeecCchHHHHHHHHHHhC-CCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCS--YKAAAGGSLSNSLVALARLG-GKP 196 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~--~~~~~GG~a~NvA~ala~LG-~~~ 196 (479)
+++.+|++|||+++|+...++.+|++++++++|...+++.++...+.+.+.... ....+||++.|+|++|++|| .
T Consensus 31 ~~~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~l~~~l~~~~~~~~~~~GGsaaNtA~~lArLGG~-- 108 (434)
T PRK15074 31 TSRTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNNLITHEFAGGTIGNTLHNYSVLADD-- 108 (434)
T ss_pred CCCCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHHHHHHHhhccccccccCCCHHHHHHHHHHHcCCC--
Confidence 678899999999999999999999999999999999999988888887775333 46679999999999999996 7
Q ss_pred CCCCCccEEEEEEeCCC-chHHHHHHHHH--hcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhh
Q 011689 197 IGGPALNVAMTGSVGSD-PLGGFYRAKLR--RANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVN 273 (479)
Q Consensus 197 ~~~~~~~v~~ig~VG~D-~~G~~i~~~L~--~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~ 273 (479)
++.|+|+||+| .+|+++++.|+ +.||++.++...+.+|+.|+++++++|+|+++.++|++..++++++...
T Consensus 109 ------~~~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~dGeRt~~t~~GA~~~Lt~edld~~ 182 (434)
T PRK15074 109 ------RSVLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISEDGERTFAISPGHMNQLRPESIPED 182 (434)
T ss_pred ------CeEEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECCCCCEEEEEecChhhcCChhHCCHh
Confidence 89999999999 79999999997 6899999887666789999999999999999999999888988888777
Q ss_pred hccCCcEEEEeccccCCc---chHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 274 LISKTNIFIVEGYLFELP---DTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 274 ~l~~ad~v~i~g~~~~~~---~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.+++++++|++|+.+..+ ...+.+.++++.|++.|++|++|++...........+.+.+++++||+++|++|+..|+
T Consensus 183 ~i~~a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~~vDILf~NeeEa~~Lt 262 (434)
T PRK15074 183 VIAGASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKEHVSILAMNEDEAEALT 262 (434)
T ss_pred HhccCCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHhcCCEEEcCHHHHHHHh
Confidence 899999999999976421 23678889999999999999999986543222222233456679999999999999999
Q ss_pred CCCCCCcHHHHHHHHhcCCCEEEEeecCCCeEEEECC-------eE--------------------------------EE
Q 011689 351 HFSSKESPESTTRYLSHFVPLVSVTDGARGSYIGVKG-------EA--------------------------------VY 391 (479)
Q Consensus 351 g~~~~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~-------~~--------------------------------~~ 391 (479)
+. ++++.+.+.+..+++.||||+|++|++++..+ .. ++
T Consensus 263 G~---~d~eea~~~L~~~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (434)
T PRK15074 263 GE---SDPLLASDKALDWVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPLRVYSH 339 (434)
T ss_pred CC---CCHHHHHHHHHcCCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccchhccccccccccccc
Confidence 84 35666666666678999999999999997521 22 27
Q ss_pred eCCC---CCCCCCccchhHHHHHHHHHHHHcCC--------------------ChHHHHHHHHHHHHHHHhcccCCC--C
Q 011689 392 IPPS---PCVPVDTCGAGDAYASGILYGILRGV--------------------SDLKGMGALAARIAATVVGQQGTR--L 446 (479)
Q Consensus 392 vpa~---~v~vvDttGAGDaF~Agfl~~l~~g~--------------------~~l~eAl~~A~a~Aa~~v~~~G~~--~ 446 (479)
+|++ ++++||||||||+|+|||+|+|++|+ + +.+|+++|+++|+.++++.|++ .
T Consensus 340 ~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~a~~vi~~~G~~~~~ 418 (434)
T PRK15074 340 IAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKRTYLTYSS-LAQVCKYANRVSYEVLNQHSPRLSR 418 (434)
T ss_pred cCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccccccccCC-HHHHHHHHHHHHHHHHhhcCCCCCC
Confidence 8888 78999999999999999999999997 6 9999999999999999999995 3
Q ss_pred CCCCHHH
Q 011689 447 SVRHASE 453 (479)
Q Consensus 447 ~~p~~~e 453 (479)
++|+.++
T Consensus 419 ~~p~~~~ 425 (434)
T PRK15074 419 GLPERED 425 (434)
T ss_pred CCCCccc
Confidence 5666543
No 4
>PLN02543 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=1.1e-45 Score=389.08 Aligned_cols=328 Identities=16% Similarity=0.132 Sum_probs=249.2
Q ss_pred cCCCCCCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHh
Q 011689 113 SGSASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL 192 (479)
Q Consensus 113 ~~~~~~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~L 192 (479)
+-.++.++++ |+|||++++|++...........|--...++.. ......+...+||+++|+|++|+||
T Consensus 118 ~~~~~~~~~~--v~~~Ge~liDf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~f~~~~GGa~aNVAvaLARL 185 (496)
T PLN02543 118 IDFPYDDPPL--VCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKML----------QWDPPEFARAPGGPPSNVAISHVRL 185 (496)
T ss_pred ccccCCCCCe--EEEeChhhhhhcCCCcccccccccccccccccc----------cccCCeeEeccCcHHHHHHHHHHHC
Confidence 3445666555 999999999999864210000000000011111 0112368899999999999999999
Q ss_pred CCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEEC--CCCCeEEE-E-ecCCCCCCCC
Q 011689 193 GGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTT--PDAQRAML-A-YQGTSSTINY 267 (479)
Q Consensus 193 G~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~--~~G~rt~~-~-~~ga~~~l~~ 267 (479)
|. ++.|+|+||+|.+|+++++.|++.||+++++++. +.+|+.+++.++ .+| |.++ . ..+++..+..
T Consensus 186 G~--------~vafIG~VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~g-r~~~~~~~~gA~~~L~~ 256 (496)
T PLN02543 186 GG--------RAAFMGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGG-KMVAETVKEAAEDSLLA 256 (496)
T ss_pred CC--------CEEEEEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCC-CEEEEecCCCHHHhCCh
Confidence 99 8999999999999999999999999999998765 458999998874 445 4443 2 3355567777
Q ss_pred ChhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhh------HHHHHHhcccCcEEEc
Q 011689 268 DPCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHY------DDFWEIVGNYADIVFA 341 (479)
Q Consensus 268 ~~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~------~~~~~~ll~~~Dvl~~ 341 (479)
+++....+.++++||++++.+..+.....+.++++.++++|++|+||++- +..+| .+.+..+++++|||++
T Consensus 257 ~di~~~~l~~a~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~---R~~LW~~~~~~~~~i~~~l~~aDIl~~ 333 (496)
T PLN02543 257 SELNLAVLKEARMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNL---PLPLWRSRDETRELIKKAWNEADIIEV 333 (496)
T ss_pred hhcCHhHhCCCceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCC---CccccCCHHHHHHHHHHHHHhCCEEEe
Confidence 77777788999999999886544445688899999999999999999862 22222 3445667899999999
Q ss_pred CHHHHHHhhCCCC--------C------------------CcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCC
Q 011689 342 NSDEARAFCHFSS--------K------------------ESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPS 395 (479)
Q Consensus 342 N~~Ea~~L~g~~~--------~------------------~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~ 395 (479)
|++|++.|+|... . .+.+.+..++..+++.||||+|++|+++++++....++..
T Consensus 334 SeeEa~~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~ 413 (496)
T PLN02543 334 SRQELEFLLDEDYYERKRNYPPQYYAESFEQTKNWRDYYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGT 413 (496)
T ss_pred cHHHHHHHhCCCcccccccccchhhhhhhhhhhcccccccCCHHHHHHHHHCCCCEEEEEcCCCcEEEEECCCccccccc
Confidence 9999999998531 0 1334556667788999999999999999875322122111
Q ss_pred -----CCCCCCccchhHHHHHHHHHHHHc-------CCChHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHcccc
Q 011689 396 -----PCVPVDTCGAGDAYASGILYGILR-------GVSDLKGMGALAARIAATVVGQQGTRLSVRHASELAESFAYRIK 463 (479)
Q Consensus 396 -----~v~vvDttGAGDaF~Agfl~~l~~-------g~~~l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~~ 463 (479)
+..+||||||||+|+|||+++|++ +++ +++|++||+++||++|++.|+..++|+++++++++++.|.
T Consensus 414 ~~~~v~~~~VDTTGAGDAF~AGfL~~Ll~~~~~~~~g~~-l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev~~~~~~~~~ 492 (496)
T PLN02543 414 EDVLITPFTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDV-LERQLRFAVAAGIISQWTIGAVRGFPTESATQNLKEQVYV 492 (496)
T ss_pred ccccCCCCCcCCCchHHHHHHHHHHHHHhcccccccccc-HHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhhcc
Confidence 122489999999999999999995 666 9999999999999999999999999999999999998876
Q ss_pred cc
Q 011689 464 SS 465 (479)
Q Consensus 464 ~~ 465 (479)
.+
T Consensus 493 ~~ 494 (496)
T PLN02543 493 PS 494 (496)
T ss_pred cc
Confidence 53
No 5
>PLN02967 kinase
Probab=100.00 E-value=2.7e-45 Score=389.62 Aligned_cols=334 Identities=19% Similarity=0.188 Sum_probs=261.8
Q ss_pred CccCCCCCCccccccCCCCCCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhh-ccCCCceee
Q 011689 99 SEADDDGDEYDEEISGSASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRA-MDGCSYKAA 177 (479)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~-~~~~~~~~~ 177 (479)
++.+.|.+.++.|++..++.+++. |+|||++++|++..... ...++..+....+... .....+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~--V~~iGe~l~D~~p~g~~-----------~~~l~~~~~~~~~~~~~s~~~~~~~~ 241 (581)
T PLN02967 175 SEEELDLEKDDGEDISHTYGWPPL--VCCFGAAQHAFVPSGRP-----------ANRLLDYEIHERMKDAFWAPEKFVRA 241 (581)
T ss_pred ccccccccccccccccCcCCCCCe--EEEECchhheecccCcc-----------chhhhhccccccccccccCccceeee
Confidence 444555677777889888888775 99999999999874211 0111111111111100 012367889
Q ss_pred cCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEE
Q 011689 178 AGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAML 256 (479)
Q Consensus 178 ~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~ 256 (479)
+||+++|+|++|++||. ++.|+|+||+|.+|+++++.|+++||+++++++. +.+|+.+++.++++|+++++
T Consensus 242 ~GGa~aNVAvaLARLG~--------~v~fIg~VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~ 313 (581)
T PLN02967 242 PGGSAGGVAIALASLGG--------KVAFMGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTT 313 (581)
T ss_pred cCcHHHHHHHHHHHCCC--------CEEEEEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEE
Confidence 99999999999999999 8999999999999999999999999999988764 45899999999989997765
Q ss_pred -EecCCCCCCCCChhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhh------HHHH
Q 011689 257 -AYQGTSSTINYDPCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHY------DDFW 329 (479)
Q Consensus 257 -~~~ga~~~l~~~~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~------~~~~ 329 (479)
.+++++..+..+++....+.++++||++++.+..+.....+.++++.+++.|++|+||++- +..+| .+.+
T Consensus 314 ~~~~gAd~~L~~~di~~~~l~~A~i~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNl---R~~lw~~~e~~~e~i 390 (581)
T PLN02967 314 CVKPCAEDSLSKSEINIDVLKEAKMFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNL---PLPLWSSSEETKSFI 390 (581)
T ss_pred EecCChhhhCChhhcCHhHhcCCCEEEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCC---CcccccchHHHHHHH
Confidence 4577877788777777778999999999875433334688999999999999999999862 22222 3345
Q ss_pred HHhcccCcEEEcCHHHHHHhhCCCCCC---------------cHHHHHHHHhcCCCEEEEeecCCCeEEEECCe---EEE
Q 011689 330 EIVGNYADIVFANSDEARAFCHFSSKE---------------SPESTTRYLSHFVPLVSVTDGARGSYIGVKGE---AVY 391 (479)
Q Consensus 330 ~~ll~~~Dvl~~N~~Ea~~L~g~~~~~---------------~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~---~~~ 391 (479)
..+++++|||++|++|+..|+|..... ..+.+..++..+++.||||+|++|++++.++. ...
T Consensus 391 ~elL~~aDILk~NeeEl~~LtG~~~~~e~~~~~~~~~~~~~~~~e~a~~l~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~ 470 (581)
T PLN02967 391 QEAWNLADIIEVTKQELEFLCGIEPTEEFDTKDNDKSKFVHYSPEVVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHG 470 (581)
T ss_pred HHHHHhCCEEEECHHHHHHHhCCCccccccccccchhccccchHHHHHHHHhCCCCEEEEEECccceEEEECCCceeEee
Confidence 678899999999999999999853211 12334556667899999999999999988644 444
Q ss_pred eCCCCCC--CCCccchhHHHHHHHHHHHHcC-------CChHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 011689 392 IPPSPCV--PVDTCGAGDAYASGILYGILRG-------VSDLKGMGALAARIAATVVGQQGTRLSVRHASELAES 457 (479)
Q Consensus 392 vpa~~v~--vvDttGAGDaF~Agfl~~l~~g-------~~~l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~ 457 (479)
+++++++ +||||||||+|+|||+++|+++ ++ +++|++||+++||++++..|+..++|+.+++++-
T Consensus 471 ~~a~~V~V~vVDTTGAGDAF~AGfL~~Ll~g~~~~~g~~~-LeeaLrfAnAaAAL~vt~~GA~~glPt~~eV~~~ 544 (581)
T PLN02967 471 MEDAPITPFTSDMSASGDGIVAGLMRMLTVQPHLITDKGY-LEKTIKYAIDCGVIDQWLLARTRGFPPKEDMEDE 544 (581)
T ss_pred ccCCCCCCCCCCCCchhHHHHHHHHHHHHhccCccccccc-HHHHHHHHHHHHHHHhccCCCccCCCCHHHHhhh
Confidence 5666666 5999999999999999999984 55 9999999999999999999999999999999754
No 6
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.
Probab=100.00 E-value=8.8e-45 Score=365.64 Aligned_cols=309 Identities=39% Similarity=0.581 Sum_probs=256.2
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
.+|+|+|++++|+++.++....+...+.+|...+.+.+......+ .......+||+++|+|++|++||.
T Consensus 2 ~~v~~vG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~GG~~~N~A~~la~LG~-------- 70 (312)
T cd01168 2 YDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLA---KLPVKYIAGGSAANTIRGAAALGG-------- 70 (312)
T ss_pred ceEEEECCCeEEEEEecCHHHHHHcCCCCCceeecCHHHHHHHHH---hcCccccCCCHHHHHHHHHHHhcC--------
Confidence 469999999999999998744444444455554442111111111 114678899999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFI 282 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~ 282 (479)
++.++|.||+|.+|+.+++.|+++||++.++...+.+|+.++++++++|+|+++.+++++..++.+++....+++++++|
T Consensus 71 ~~~~i~~vG~D~~g~~i~~~l~~~GV~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 150 (312)
T cd01168 71 SAAFIGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDAERTMCTYLGAANELSPDDLDWSLLAKAKYLY 150 (312)
T ss_pred CeEEEEEeccChhHHHHHHHHHHCCCccccccCCCCCceEEEEEEcCCCceeeecccchhhcCChhHCCHHHHccCCEEE
Confidence 89999999999999999999999999999887666789999999998999999988888878888777777789999999
Q ss_pred EeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHHHH
Q 011689 283 VEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPESTT 362 (479)
Q Consensus 283 i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~a~ 362 (479)
++++.+..+ .+.+..+++.+++.|.++++|+++...... +.+.++.+++++|++++|++|++.|++....+..+.+.
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~-~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~~~~~~a~ 227 (312)
T cd01168 151 LEGYLLTVP--PEAILLAAEHAKENGVKIALNLSAPFIVQR-FKEALLELLPYVDILFGNEEEAEALAEAETTDDLEAAL 227 (312)
T ss_pred EEEEecCCC--HHHHHHHHHHHHHcCCEEEEeCCcHHHHHH-HHHHHHHHHhhCCEEEeCHHHHHHHhCCCCCChHHHHH
Confidence 999865555 378889999999999999999975432222 22345667799999999999999999853223445567
Q ss_pred HHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCC-CCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 363 RYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSP-CVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 363 ~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
+++..+++.||||+|++|++++++++.+++|+++ +++||||||||+|+|||++++++|++ +++|+++|+++|+++|++
T Consensus 228 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~l~~l~~g~~-~~~a~~~a~~~Aa~~v~~ 306 (312)
T cd01168 228 KLLALRCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEP-LEECIRLGSYAAAEVIQQ 306 (312)
T ss_pred HHHhcCCCEEEEecCCCCeEEEECCEEEeCCCCCCCCcccCCchHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHhc
Confidence 7888899999999999999999988889999998 89999999999999999999999998 999999999999999999
Q ss_pred cCCCC
Q 011689 442 QGTRL 446 (479)
Q Consensus 442 ~G~~~ 446 (479)
.|+++
T Consensus 307 ~G~~~ 311 (312)
T cd01168 307 LGPRL 311 (312)
T ss_pred cCCCC
Confidence 99864
No 7
>PTZ00247 adenosine kinase; Provisional
Probab=100.00 E-value=1.1e-44 Score=370.47 Aligned_cols=317 Identities=23% Similarity=0.328 Sum_probs=257.6
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+++++|+|||++++|+++.++.+|++++...+|...+.++......-+......+...+||+++|+|+++++||.
T Consensus 3 ~~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~----- 77 (345)
T PTZ00247 3 SAPKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQ----- 77 (345)
T ss_pred CCCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhc-----
Confidence 456789999999999999999999999866788877776433333333333456789999999999999998862
Q ss_pred CCc-cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh----hh
Q 011689 200 PAL-NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV----NL 274 (479)
Q Consensus 200 ~~~-~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~----~~ 274 (479)
... ++.|+|.||+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..++.+++.. +.
T Consensus 78 ~g~~~v~~ig~vG~D~~G~~i~~~l~~~GVd~~~~~~~~~~Tg~~~i~v~-~~~r~~~~~~ga~~~l~~~~i~~~~~~~~ 156 (345)
T PTZ00247 78 APKGFVCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVC-GKERSLVANLGAANHLSAEHMQSHAVQEA 156 (345)
T ss_pred CCCCcEEEEEEeccchhHHHHHHHHHHcCCeeeccccCCCCcEEEEEEEc-CCCcccccCcchhhcCChHHcCcHHHHHH
Confidence 000 5999999999999999999999999999877656678999999887 47999999999888887766543 36
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC-
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFS- 353 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~- 353 (479)
+++++++|++++.+..+ .+.+..+++.++++|+++++|++...+.... .+.+..+++++|++++|++|++.|+|..
T Consensus 157 l~~~~~v~~~g~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~-~~~~~~~l~~~Dil~~N~~Ea~~l~g~~~ 233 (345)
T PTZ00247 157 IKTAQLYYLEGFFLTVS--PNNVLQVAKHARESGKLFCLNLSAPFISQFF-FERLLQVLPYVDILFGNEEEAKTFAKAMK 233 (345)
T ss_pred HhhCCEEEEEEEEeccc--HHHHHHHHHHHHHcCCEEEEECCcHHHHHHH-HHHHHHHHhhCCEEEeCHHHHHHHhhccC
Confidence 78999999999865444 5788999999999999999998654322121 2335667889999999999999999832
Q ss_pred -CCCcHHHHHHHHh-------cCCCEEEEeecCCCeEEEECCeEEEeCCCCC---CCCCccchhHHHHHHHHHHHHcCCC
Q 011689 354 -SKESPESTTRYLS-------HFVPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYASGILYGILRGVS 422 (479)
Q Consensus 354 -~~~~~~~a~~~l~-------~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~l~~g~~ 422 (479)
..++.+++.+.+. .+.+.||||+|++|++++++++.+++|++++ ++||||||||+|+|||++++++|++
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~~ 313 (345)
T PTZ00247 234 WDTEDLKEIAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKD 313 (345)
T ss_pred CCccCHHHHHHHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCCC
Confidence 1234555444332 2478999999999999999998888998887 5899999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCC
Q 011689 423 DLKGMGALAARIAATVVGQQGTRL 446 (479)
Q Consensus 423 ~l~eAl~~A~a~Aa~~v~~~G~~~ 446 (479)
+++|+++|+++|+++|++.|+..
T Consensus 314 -~~~al~~a~~aAa~~v~~~Ga~~ 336 (345)
T PTZ00247 314 -IDRCVEAGHYSAQVIIQHNGCTY 336 (345)
T ss_pred -HHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999884
No 8
>PRK11142 ribokinase; Provisional
Probab=100.00 E-value=3.1e-43 Score=353.06 Aligned_cols=297 Identities=22% Similarity=0.339 Sum_probs=246.9
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
.+|+|+|++++|++..++. +|. ++ .. .....+...+||++.|+|++|++||.
T Consensus 3 ~~i~~iG~~~~D~~~~~~~-----~p~-~~-----------~~---~~~~~~~~~~GG~~~Nva~~la~lG~-------- 54 (306)
T PRK11142 3 GKLVVLGSINADHVLNLES-----FPR-PG-----------ET---LTGRHYQVAFGGKGANQAVAAARLGA-------- 54 (306)
T ss_pred CcEEEECCceeeEEEEeCC-----CCC-CC-----------Ce---eEeccceecCCCcHHHHHHHHHhcCC--------
Confidence 3699999999999998765 221 11 11 12236778899999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh--hhhccCCc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--VNLISKTN 279 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~--~~~l~~ad 279 (479)
++.++|.||+|.+|+.+++.|++.||+++++.. ++.+|+.++++++.+|+|+++.++++...++++++. .+.+.+++
T Consensus 55 ~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 134 (306)
T PRK11142 55 DIAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHRELIANAD 134 (306)
T ss_pred cEEEEEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeCCccccCCHHHHHHHHhhhccCC
Confidence 899999999999999999999999999998864 456899999999888999999999887777766543 35578999
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC--Cc
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK--ES 357 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~--~~ 357 (479)
++|+++. .+ .+.+.++++.++++|.++++|++... . +...+++++|++++|++|++.+++.... ++
T Consensus 135 ~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~d~~~~~---~----~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~ 202 (306)
T PRK11142 135 ALLMQLE---TP--LETVLAAAKIAKQHGTKVILNPAPAR---E----LPDELLALVDIITPNETEAEKLTGIRVEDDDD 202 (306)
T ss_pred EEEEeCC---CC--HHHHHHHHHHHHHcCCEEEEECCCCc---c----cCHHHHhhCCEEcCCHHHHHHHhCCCCCChHH
Confidence 9999843 23 56788899999999999999986421 1 1234668999999999999999986422 22
Q ss_pred HHHH-HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011689 358 PEST-TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAA 436 (479)
Q Consensus 358 ~~~a-~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa 436 (479)
...+ ..+.+.+++.+|||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+
T Consensus 203 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g~~-~~~al~~a~~~Aa 281 (306)
T PRK11142 203 AAKAAQVLHQKGIETVLITLGSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKP-LPEAIRFAHAAAA 281 (306)
T ss_pred HHHHHHHHHHhCCCeEEEEECCCcEEEEeCCcceeccCCCcccccCCCchhHHHHHHHHHHHCCCC-HHHHHHHHHHHHH
Confidence 3333 3455678999999999999999888888899999999999999999999999999999998 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHHc
Q 011689 437 TVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 437 ~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
.+|++.|+...+|+.+++++++++
T Consensus 282 ~~~~~~G~~~~~~~~~~~~~~~~~ 305 (306)
T PRK11142 282 IAVTRKGAQPSIPWREEIDAFLQE 305 (306)
T ss_pred HHcCCCcccccCCCHHHHHHHHhc
Confidence 999999999888999999888763
No 9
>PLN02323 probable fructokinase
Probab=100.00 E-value=5e-43 Score=355.83 Aligned_cols=308 Identities=21% Similarity=0.275 Sum_probs=250.9
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
+.++|++||++++|++..++. +|.. ....+...+||++.|+|++|++||.
T Consensus 9 ~~~~i~~iG~~~vD~~~~~~~-----~~~~-------------------~~~~~~~~~GG~~~NvA~~la~LG~------ 58 (330)
T PLN02323 9 ESSLVVCFGEMLIDFVPTVSG-----VSLA-------------------EAPAFKKAPGGAPANVAVGISRLGG------ 58 (330)
T ss_pred CCCcEEEechhhhhhccCCCC-----CCcc-------------------cccceeecCCChHHHHHHHHHhcCC------
Confidence 456799999999999987543 1110 1235678999999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEEEECCCCCeEEEEec--CCCCCCCCChhhhhhccC
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLISK 277 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~~~~~G~rt~~~~~--ga~~~l~~~~~~~~~l~~ 277 (479)
++.++|.||+|.+|+++++.|++.||+++++.+.+ .+|+.+++.++++|+|+++.+. +++..++.+++..+.++.
T Consensus 59 --~~~~i~~vG~D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (330)
T PLN02323 59 --SSAFIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLDLIRK 136 (330)
T ss_pred --ceeEEEEecCChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCChHHHcc
Confidence 89999999999999999999999999999887554 5899999988888999988775 444466666666667889
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh--h-hhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--C-IERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~-~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
++++|++++.+........+..+++.+++.|.++++|++... + ......+.++.+++++|++++|++|+..++|...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~~ 216 (330)
T PLN02323 137 AKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDD 216 (330)
T ss_pred CCEEEEechhccCchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCC
Confidence 999999876543232245677889999999999999986311 1 0111234455677899999999999999998643
Q ss_pred CCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCC------hHHHHH
Q 011689 355 KESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVS------DLKGMG 428 (479)
Q Consensus 355 ~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~------~l~eAl 428 (479)
. ..+.+.+++..+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ ++++|+
T Consensus 217 ~-~~~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al 295 (330)
T PLN02323 217 P-DDDTVVKLWHPNLKLLLVTEGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREAL 295 (330)
T ss_pred c-cHHHHHHHHhcCCCEEEEecCCCceEEEeCCCceEeCCccCCCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHH
Confidence 2 233444666678999999999999999988877889999999999999999999999999999974 389999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 429 ALAARIAATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
++|+++|+++|++.|+...+|+.+++++++++.
T Consensus 296 ~~a~a~Aa~~v~~~g~~~~~~~~~~v~~~l~~~ 328 (330)
T PLN02323 296 RFANACGAITTTERGAIPALPTKEAVLKLLKKA 328 (330)
T ss_pred HHHHHHHHHHHhccCCccCCCCHHHHHHHHHHh
Confidence 999999999999999988899999999988764
No 10
>PTZ00292 ribokinase; Provisional
Probab=100.00 E-value=3.4e-42 Score=349.07 Aligned_cols=303 Identities=25% Similarity=0.334 Sum_probs=246.6
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
.+++|+|+|.+++|+++.++. +|. ++ +. .....+...+||++.|+|++|++||.
T Consensus 14 ~~~~vlviG~~~vD~~~~~~~-----~~~-~~-----------~~---~~~~~~~~~~GG~~~NvA~~la~lG~------ 67 (326)
T PTZ00292 14 AEPDVVVVGSSNTDLIGYVDR-----MPQ-VG-----------ET---LHGTSFHKGFGGKGANQAVMASKLGA------ 67 (326)
T ss_pred CCCCEEEEccceeeEEEecCC-----CCC-CC-----------Cc---eeecCceeCCCCcHHHHHHHHHHcCC------
Confidence 356799999999999998765 221 11 11 12235678899999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeee-eCCCCceEEEEEEC-CCCCeEEEEecCCCCCCCCChhhh--hhcc
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEP-IKDGTTGTVIVLTT-PDAQRAMLAYQGTSSTINYDPCLV--NLIS 276 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~-~~~~~T~~~~v~~~-~~G~rt~~~~~ga~~~l~~~~~~~--~~l~ 276 (479)
++.++|.||+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ .+|+|+++.+++++..++++++.. ..+.
T Consensus 68 --~~~~is~vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~ 145 (326)
T PTZ00292 68 --KVAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDAQTDNIQ 145 (326)
T ss_pred --CeEEEEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHHHHHHhh
Confidence 89999999999999999999999999999885 45578999999988 789999999988877776654432 3466
Q ss_pred C-CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC-
Q 011689 277 K-TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS- 354 (479)
Q Consensus 277 ~-ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~- 354 (479)
. ++++++++. .+ .+.+.++++.+++.|.++++|++.... ....+.++.+++++|++++|++|++.+++...
T Consensus 146 ~~~~~~~~~~~---~~--~~~~~~~~~~a~~~g~~v~~D~~~~~~--~~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~ 218 (326)
T PTZ00292 146 NICKYLICQNE---IP--LETTLDALKEAKERGCYTVFNPAPAPK--LAEVEIIKPFLKYVSLFCVNEVEAALITGMEVT 218 (326)
T ss_pred hhCCEEEECCC---CC--HHHHHHHHHHHHHcCCEEEEECCCCcc--ccccccHHHHHhcCCEEcCCHHHHHHHhCCCCC
Confidence 7 899998742 23 467778899999999999999974211 01113456677899999999999999988542
Q ss_pred -CCcHHHHH-HHHhcCCCEEEEeecCCCeEEEECCe-EEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHH
Q 011689 355 -KESPESTT-RYLSHFVPLVSVTDGARGSYIGVKGE-AVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALA 431 (479)
Q Consensus 355 -~~~~~~a~-~~l~~g~~~VVVT~G~~Ga~~~~~~~-~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A 431 (479)
.+....+. .++..+++.||||+|++|+++++++. .+++|+++++++|||||||+|+|||++++++|++ +++|+++|
T Consensus 219 ~~~~~~~~~~~l~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-~~~al~~a 297 (326)
T PTZ00292 219 DTESAFKASKELQQLGVENVIITLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKD-LKESCKRA 297 (326)
T ss_pred ChhHHHHHHHHHHHcCCCeEEEEeCCCcEEEEeCCCceEEccCCccccCCCcchHHHHHHHHHHHHHCCCC-HHHHHHHH
Confidence 22233333 45567899999999999999988654 5889999999999999999999999999999998 99999999
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011689 432 ARIAATVVGQQGTRLSVRHASELAESFA 459 (479)
Q Consensus 432 ~a~Aa~~v~~~G~~~~~p~~~el~~~l~ 459 (479)
+++|++++++.|+...+|+.+++++.++
T Consensus 298 ~a~Aa~~v~~~G~~~~~~~~~~~~~~~~ 325 (326)
T PTZ00292 298 NRIAAISVTRHGTQSSYPHPSELPADVK 325 (326)
T ss_pred HHHHHHHcCCCCccccCCCHHHHHHHhc
Confidence 9999999999999988999999988765
No 11
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=1.2e-41 Score=360.36 Aligned_cols=319 Identities=21% Similarity=0.210 Sum_probs=246.7
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhh---ccCCCceeecCchHHHHHHHHHHhCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRA---MDGCSYKAAAGGSLSNSLVALARLGGKP 196 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~---~~~~~~~~~~GG~a~NvA~ala~LG~~~ 196 (479)
.++++|+++|++++|+++.++. +|. ++.... ...... .........+|| ++|+|++|++||.
T Consensus 70 ~~~~~vl~lG~~~vD~i~~V~~-----lP~-~~~~~~------~~~~~~~~~~~~~~~~~~~GG-~~NvAvaLarLG~-- 134 (470)
T PLN02341 70 GKEIDVATLGNLCVDIVLPVPE-----LPP-PSREER------KAYMEELAASPPDKKSWEAGG-NCNFAIAAARLGL-- 134 (470)
T ss_pred cccccEEEECCcceeEEEecCC-----CCC-CCHHHH------HHHHHhhcccccccceecCCh-HHHHHHHHHHcCC--
Confidence 4556899999999999999875 332 111000 000000 001234556788 6899999999999
Q ss_pred CCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC---------CCceEEEEEECCCCCeEEEEecCCCCCCC-
Q 011689 197 IGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD---------GTTGTVIVLTTPDAQRAMLAYQGTSSTIN- 266 (479)
Q Consensus 197 ~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~---------~~T~~~~v~~~~~G~rt~~~~~ga~~~l~- 266 (479)
++.++|.||+|.+|+++++.|++.||++.++...+ .+|+.++++++++|+|+++...+......
T Consensus 135 ------~v~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~~~ 208 (470)
T PLN02341 135 ------RCSTIGHVGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAF 208 (470)
T ss_pred ------CeEEEEEecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeeccccccccch
Confidence 89999999999999999999999999999886432 46999999999889887664433221111
Q ss_pred -----CChhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh--h-h-hhhhHHHHHHhcccCc
Q 011689 267 -----YDPCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--C-I-ERHYDDFWEIVGNYAD 337 (479)
Q Consensus 267 -----~~~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~-~-~~~~~~~~~~ll~~~D 337 (479)
..+...+.++++++||++++.+.. ...+.+..+++.+++.|.+|++|++... + . .....+.++.+++++|
T Consensus 209 ~~~~~l~~~~~~~l~~adiv~lsg~~~~~-~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~D 287 (470)
T PLN02341 209 SWISKLSAEAKMAIRQSKALFCNGYVFDE-LSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSD 287 (470)
T ss_pred hhhhcccHHHHhhhhcCCEEEEeceeCCc-CCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCC
Confidence 112234567899999999986431 1267788999999999999999996421 0 0 0011234567889999
Q ss_pred EEEcCHHHHHHhhCCCCCCcHHHH-HHHHhcC--CCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHH
Q 011689 338 IVFANSDEARAFCHFSSKESPEST-TRYLSHF--VPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGIL 414 (479)
Q Consensus 338 vl~~N~~Ea~~L~g~~~~~~~~~a-~~~l~~g--~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl 414 (479)
++++|++|++.++|.. +.+++ ..++..+ .+.||||+|++|++++++++.+++|++++++||||||||+|+|||+
T Consensus 288 il~~Ne~Ea~~l~g~~---~~~~a~~~l~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v~vVDTtGAGDaF~Agfl 364 (470)
T PLN02341 288 VLLLTSEEAEALTGIR---NPILAGQELLRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIA 364 (470)
T ss_pred EEEecHHHHHHHhCCC---CHHHHHHHHHhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCcCCCCCcCccHHHHHHHH
Confidence 9999999999999853 34444 4455555 5899999999999999998899999999999999999999999999
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHccccc
Q 011689 415 YGILRGVSDLKGMGALAARIAATVVGQQGTRLSVRHASELAESFAYRIKS 464 (479)
Q Consensus 415 ~~l~~g~~~l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~~~ 464 (479)
+++++|++ +++|+++|+++||++|++.|+..++|++++++++|++....
T Consensus 365 ~gll~G~~-l~eal~~A~a~aA~~v~~~Ga~~~~p~~~ev~~~l~~~~~~ 413 (470)
T PLN02341 365 LGYIHNLP-LVNTLTLANAVGAATAMGCGAGRNVATLEKVLELLRASNLN 413 (470)
T ss_pred HHHHcCCC-HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHHhcCCC
Confidence 99999998 99999999999999999999999999999999999866543
No 12
>cd01944 YegV_kinase_like YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=1.4e-41 Score=338.54 Aligned_cols=287 Identities=25% Similarity=0.324 Sum_probs=231.4
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|||++++|++..+++ +|. .+. . .....+...+|| +.|+|++|++||. +
T Consensus 1 ~i~~iG~~~~D~i~~~~~-----~~~-~~~-----------~---~~~~~~~~~~GG-~~Nva~~l~~lG~--------~ 51 (289)
T cd01944 1 KVLVIGAAVVDIVLDVDK-----LPA-SGG-----------D---IEAKSKSYVIGG-GFNVMVAASRLGI--------P 51 (289)
T ss_pred CeEEEcceeEEEEeeccc-----CCC-CCC-----------c---cccceeeeccCc-HHHHHHHHHHcCC--------C
Confidence 489999999999998764 211 111 1 122367899999 9999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIV 283 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i 283 (479)
+.++|.||+|.+|+++++.|++.||+++++...+..|+.++++++++|+|+++.+++++..++++++....+.+++++|+
T Consensus 52 ~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (289)
T cd01944 52 TVNAGPLGNGNWADQIRQAMRDEGIEILLPPRGGDDGGCLVALVEPDGERSFISISGAEQDWSTEWFATLTVAPYDYVYL 131 (289)
T ss_pred eEEEEEecCChHHHHHHHHHHHcCCccccccccCCCCeEEEEEEcCCCceEEEEeCCccCCCCHHHhccccCCCCCEEEE
Confidence 99999999999999999999999999998877667888888888888999999998887666655444334678999999
Q ss_pred eccccCCcc-hHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHHHH
Q 011689 284 EGYLFELPD-TIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPESTT 362 (479)
Q Consensus 284 ~g~~~~~~~-~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~a~ 362 (479)
+++.+..+. ....+.++++.++ .+.++++|++... .....+.++.+++++|++++|++|++.|+|....+....+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~D~~~~~--~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~~~~~~~~~~ 208 (289)
T cd01944 132 SGYTLASENASKVILLEWLEALP-AGTTLVFDPGPRI--SDIPDTILQALMAKRPIWSCNREEAAIFAERGDPAAEASAL 208 (289)
T ss_pred eCccccCcchhHHHHHHHHHhcc-CCCEEEEcCcccc--cccCHHHHHHHHhcCCEEccCHHHHHHHhCCCCcchHHHHH
Confidence 998654332 2456666666644 5789999986321 11124556778899999999999999999865332222245
Q ss_pred HHHhcCCCEEEEeecCCCeEEEE-CCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 363 RYLSHFVPLVSVTDGARGSYIGV-KGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 363 ~~l~~g~~~VVVT~G~~Ga~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
++...+.+.||||+|++|++++. ++..+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+.+|++
T Consensus 209 ~~~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~~~~g~~-~~~a~~~a~a~aa~~~~~ 287 (289)
T cd01944 209 RIYAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMS-LADAVLLANAAAAIVVTR 287 (289)
T ss_pred HHHhccCCeEEEEECCCcEEEEecCCCeEEecCCCCCCccCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHhhhcc
Confidence 56677889999999999999988 5667888999999999999999999999999999998 999999999999999998
Q ss_pred cC
Q 011689 442 QG 443 (479)
Q Consensus 442 ~G 443 (479)
.|
T Consensus 288 ~G 289 (289)
T cd01944 288 SG 289 (289)
T ss_pred CC
Confidence 76
No 13
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.
Probab=100.00 E-value=3.1e-41 Score=335.99 Aligned_cols=286 Identities=27% Similarity=0.387 Sum_probs=237.8
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|+|++++|++..+++ +|. .+ +. .....+..++||++.|+|++|++||. +
T Consensus 1 ~il~iG~~~~D~~~~~~~-----~~~-~~-----------~~---~~~~~~~~~~GG~~~NvA~~l~~lG~--------~ 52 (292)
T cd01174 1 KVVVVGSINVDLVTRVDR-----LPK-PG-----------ET---VLGSSFETGPGGKGANQAVAAARLGA--------R 52 (292)
T ss_pred CEEEEeeceeEEEEEecC-----CCC-CC-----------Cc---EEeccceecCCCcHHHHHHHHHHcCC--------c
Confidence 499999999999998764 221 11 11 12236678999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeee-eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh--hhhccCCcE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEP-IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--VNLISKTNI 280 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~-~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~--~~~l~~ad~ 280 (479)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++.+|+|+++.++++...++++++. .+.++.+++
T Consensus 53 ~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T cd01174 53 VAMIGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPADVDAALELIAAADV 132 (292)
T ss_pred eEEEEEEcCCccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcCCCceEEEEeCCCCCCCCHHHHHHHHHhcccCCE
Confidence 9999999999999999999999999999985 4556899999999888999999898887666654433 255789999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC--cH
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE--SP 358 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~--~~ 358 (479)
+++++. .+ .+.+..+++.++++|.++++|+++.. ..++.+++++|++++|++|++.|++....+ +.
T Consensus 133 v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~D~~~~~-------~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~ 200 (292)
T cd01174 133 LLLQLE---IP--LETVLAALRAARRAGVTVILNPAPAR-------PLPAELLALVDILVPNETEAALLTGIEVTDEEDA 200 (292)
T ss_pred EEEeCC---CC--HHHHHHHHHHHHhcCCEEEEeCCCcC-------cCcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHH
Confidence 999853 23 56788899999999999999987431 112456789999999999999999865332 22
Q ss_pred HH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 011689 359 ES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAAT 437 (479)
Q Consensus 359 ~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~ 437 (479)
+. +..+++.+++.||||+|++|++++++++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+.
T Consensus 201 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGD~F~ag~l~~l~~g~~-~~~al~~a~~~Aa~ 279 (292)
T cd01174 201 EKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAFKVKAVDTTGAGDTFIGALAAALARGLS-LEEAIRFANAAAAL 279 (292)
T ss_pred HHHHHHHHHcCCCEEEEEeCCCceEEEeCCceEEecCCCcccCCCCCcHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHH
Confidence 33 34456778999999999999999998888899999999999999999999999999999998 99999999999999
Q ss_pred HhcccCCCCCCCC
Q 011689 438 VVGQQGTRLSVRH 450 (479)
Q Consensus 438 ~v~~~G~~~~~p~ 450 (479)
++++.|+...+|+
T Consensus 280 ~~~~~G~~~~~~~ 292 (292)
T cd01174 280 SVTRPGAQPSIPT 292 (292)
T ss_pred HhcCcCCCCCCCC
Confidence 9999999988774
No 14
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-41 Score=339.61 Aligned_cols=303 Identities=31% Similarity=0.428 Sum_probs=251.4
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+++|++++|++......++ . .+ . ..........+||++.|+|+++++||. +
T Consensus 1 ~v~~iG~~~vD~~~~~~~~~~----~-~~-----------~---~~~~~~~~~~~GG~~~N~A~~~a~lG~--------~ 53 (311)
T COG0524 1 DVVVIGEANVDLIAQVVDRLP----E-PG-----------E---TVLGDFFKVAGGGKGANVAVALARLGA--------K 53 (311)
T ss_pred CEEEECchhhheehhhccCCC----C-Cc-----------c---cccccceeecCCchHHHHHHHHHHcCC--------c
Confidence 489999999999997433111 1 11 1 011224678899999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCC-CceEEEEEECCCCCeEEEEecCC-CCCCCCChhhhhhccCCcEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDG-TTGTVIVLTTPDAQRAMLAYQGT-SSTINYDPCLVNLISKTNIF 281 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~-~T~~~~v~~~~~G~rt~~~~~ga-~~~l~~~~~~~~~l~~ad~v 281 (479)
+.|+|+||+|.+|+.+++.|++.||+++++...+. +|+.+++.++++|+|.+..+++. ...++++++....+..++++
T Consensus 54 ~~~~~~vG~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 133 (311)
T COG0524 54 VALIGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGAAALLLTPEDLDEDELAGADVL 133 (311)
T ss_pred eEEEEEecCcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcCCCceeEEEECCcccccCChHHcChHHHhhcCee
Confidence 99999999999999999999999999998876555 89999999998899999999984 55566666665677899999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhh-HHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHH
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHY-DDFWEIVGNYADIVFANSDEARAFCHFSSKESPES 360 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~-~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~ 360 (479)
|++++.+..+ .+.+.++++.+++.|.++++|++... ..+ .+.+..+++++|++++|++|++.+++. ..+...
T Consensus 134 ~~~~~~l~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~---~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~--~~~~~~ 206 (311)
T COG0524 134 HISGIQLEIP--PEALLAALELAKAAGVTVSFDLNPRP---ALWDRELLEELLALADILFPNEEEAELLTGL--EEDAEA 206 (311)
T ss_pred eEEEeecCCC--hHHHHHHHHHHHHcCCeEEEecCCCc---cccchhhHHHHHhhCCEEeCCHHHHHHHhCC--CccHHH
Confidence 9999887665 38889999999999999999987432 222 355667889999999999999999985 223333
Q ss_pred H-HHHHhcCCCEEEEeecCCCeEEEECCe---EEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011689 361 T-TRYLSHFVPLVSVTDGARGSYIGVKGE---AVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAA 436 (479)
Q Consensus 361 a-~~~l~~g~~~VVVT~G~~Ga~~~~~~~---~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa 436 (479)
+ ..++..+++.+|||+|++|+++++.+. ....+++++++||||||||+|+|||++++++|++ +++|+++|+++|+
T Consensus 207 ~~~~~~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~-~~~a~~~a~a~aa 285 (311)
T COG0524 207 AAALLLAKGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-LEEALRFANAAAA 285 (311)
T ss_pred HHHHHhhcCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHhh
Confidence 3 345667899999999999999998743 3334477889999999999999999999999998 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 437 TVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 437 ~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
+++++.|+...+|+.++++.++++.
T Consensus 286 ~~~~~~g~~~~~p~~~~~~~~~~~~ 310 (311)
T COG0524 286 LAVTRPGARPSLPTREEVEAFLEEL 310 (311)
T ss_pred hhhccCCCCCCCCCHHHHHHHHhcc
Confidence 9999999999999999999998754
No 15
>PLN02548 adenosine kinase
Probab=100.00 E-value=7.4e-41 Score=340.17 Aligned_cols=307 Identities=21% Similarity=0.318 Sum_probs=247.7
Q ss_pred EcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHH---HHhCCCCCCCCCccE
Q 011689 128 LGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVAL---ARLGGKPIGGPALNV 204 (479)
Q Consensus 128 iG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~al---a~LG~~~~~~~~~~v 204 (479)
+|++++|++..++..|++++++++|.+++...+.....-+.+........+||++.|+|.++ ++||. ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~a~~l~~lg~--------~~ 72 (332)
T PLN02548 1 MGNPLLDISAVVDQDFLDKYDVKLNNAILAEEKHLPMYDELASKYNVEYIAGGATQNSIRVAQWMLQIPG--------AT 72 (332)
T ss_pred CCCceeEEEEecCHHHHHHcCCCCCceeechHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHHhcCCC--------cE
Confidence 69999999999999999999999999998776665554555566788999999999986555 55688 89
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChh----hhhhccCCcE
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPC----LVNLISKTNI 280 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~----~~~~l~~ad~ 280 (479)
.|+|.||+|.+|+++++.|++.||+++++...+.+|+.++++++ +|+|+++.+.++...++.++. ..+.+..+++
T Consensus 73 ~~ig~vG~D~~g~~i~~~L~~~gVd~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (332)
T PLN02548 73 SYMGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVV-GGERSLVANLSAANCYKVEHLKKPENWALVEKAKF 151 (332)
T ss_pred EEEEEEcCChhHHHHHHHHHHcCCceeeeccCCCCCceEEEEEe-cCCceeeeccchhhcCCHHHhcChhhHhHHhhCCE
Confidence 99999999999999999999999999987666678999998886 799998888776555544332 2345678999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC--CCcH
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS--KESP 358 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~--~~~~ 358 (479)
+|++|+.+..+ .+.+..+++.+++++.++.+|++...+... ..+.++.+++++|++++|++|++.+++... .++.
T Consensus 152 v~~~g~~~~~~--~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~-~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~ 228 (332)
T PLN02548 152 YYIAGFFLTVS--PESIMLVAEHAAANNKTFMMNLSAPFICEF-FKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDV 228 (332)
T ss_pred EEEEEEEccCC--HHHHHHHHHHHHHcCCEEEEECCChhHHHH-hHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccH
Confidence 99999866544 467788888999999999998864322211 233456677899999999999999987532 1234
Q ss_pred HHHH-HHHh----c--CCCEEEEeecCCCeEEEECCeEEEeCCC---CCCCCCccchhHHHHHHHHHHHHcCCChHHHHH
Q 011689 359 ESTT-RYLS----H--FVPLVSVTDGARGSYIGVKGEAVYIPPS---PCVPVDTCGAGDAYASGILYGILRGVSDLKGMG 428 (479)
Q Consensus 359 ~~a~-~~l~----~--g~~~VVVT~G~~Ga~~~~~~~~~~vpa~---~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl 428 (479)
+.+. ++.. . +++.||||+|++|++++.+++.+++|++ +++++|||||||+|+|||++++++|++ +++|+
T Consensus 229 ~~~~~~l~~~~~~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-l~eal 307 (332)
T PLN02548 229 EEIALKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKD-IEECV 307 (332)
T ss_pred HHHHHHHHHhhhhccccCCEEEEEeCCCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCC-HHHHH
Confidence 3332 2322 1 5789999999999999988888888764 357899999999999999999999998 99999
Q ss_pred HHHHHHHHHHhcccCCCCC
Q 011689 429 ALAARIAATVVGQQGTRLS 447 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~~ 447 (479)
++|+++|+++|++.|+..+
T Consensus 308 ~~a~aaAa~~v~~~G~~~~ 326 (332)
T PLN02548 308 RAGNYAANVIIQRSGCTYP 326 (332)
T ss_pred HHHHHHHHHHHhccCCCCC
Confidence 9999999999999998854
No 16
>PRK09434 aminoimidazole riboside kinase; Provisional
Probab=100.00 E-value=1.8e-40 Score=333.03 Aligned_cols=287 Identities=24% Similarity=0.289 Sum_probs=232.5
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
.+|+++|++++|++.... ......+||++.|+|++|++||.
T Consensus 3 ~~il~iG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~N~a~~l~~LG~-------- 43 (304)
T PRK09434 3 NKVWVLGDAVVDLIPEGE-------------------------------NRYLKCPGGAPANVAVGIARLGG-------- 43 (304)
T ss_pred CcEEEecchheeeecCCC-------------------------------CceeeCCCChHHHHHHHHHHcCC--------
Confidence 379999999999984310 13456799999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecC--CCCCCCCChhhhhhccCCc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQG--TSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~g--a~~~l~~~~~~~~~l~~ad 279 (479)
++.+++.||+|.+|+++++.|+++||++.++.. ++.+|+.+++.++++|+|++..+.. +...++..++ ..+.+++
T Consensus 44 ~~~~v~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~ 121 (304)
T PRK09434 44 ESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDL--PPFRQGE 121 (304)
T ss_pred CceEEEEecCchHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHh--hhhcCCC
Confidence 899999999999999999999999999988765 4568999999988789998754433 2223333333 2367899
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh--hh-hhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE 356 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~-~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~ 356 (479)
++|++++.+..+.......++++.+++++.++++|++... +. ...+.+.++.+++++|++++|++|+..+++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~~--- 198 (304)
T PRK09434 122 WLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGTS--- 198 (304)
T ss_pred EEEEccccccCchHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCCC---
Confidence 9999987654443356677889999999999999986321 10 01123445667899999999999999998853
Q ss_pred cHHHHHH-HHh-cCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC------ChHHHHH
Q 011689 357 SPESTTR-YLS-HFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV------SDLKGMG 428 (479)
Q Consensus 357 ~~~~a~~-~l~-~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~------~~l~eAl 428 (479)
+.+.+.+ +.+ .+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+ + +++|+
T Consensus 199 ~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~f~ag~~~~l~~g~~~~~~~~-~~~a~ 277 (304)
T PRK09434 199 QLEDAIYALADRYPIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAGLSQAGLWTDEAE-LAEII 277 (304)
T ss_pred CHHHHHHHHHhhcCCcEEEEEecCCceEEEeCCceeEeCCCCCCCCcCCCchHHHHHHHHHHHHcCCCccchHH-HHHHH
Confidence 4555554 444 4789999999999999999888899999999999999999999999999999997 6 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHH
Q 011689 429 ALAARIAATVVGQQGTRLSVRHASEL 454 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~~~p~~~el 454 (479)
++|+++|++++++.|+...+|+.+++
T Consensus 278 ~~a~~~Aa~~v~~~g~~~~~~~~~~~ 303 (304)
T PRK09434 278 AQAQACGALATTAKGAMTALPNRQEL 303 (304)
T ss_pred HHHHHHHHHHHcccCCcCCCCChHHc
Confidence 99999999999999999888888765
No 17
>PRK09850 pseudouridine kinase; Provisional
Probab=100.00 E-value=3e-40 Score=333.13 Aligned_cols=300 Identities=17% Similarity=0.156 Sum_probs=236.7
Q ss_pred CCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCC
Q 011689 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (479)
Q Consensus 119 ~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~ 198 (479)
|+++..|+|+|++++|++..++. |.+.++.. .......+||+++|+|++|++||.
T Consensus 1 ~~~~~~i~~iG~~~vD~~~~~~~------~~~~~~~~---------------~~~~~~~~GG~~~NvA~~l~~lG~---- 55 (313)
T PRK09850 1 MREKDYVVIIGSANIDVAGYSHE------SLNYADSN---------------PGKIKFTPGGVGRNIAQNLALLGN---- 55 (313)
T ss_pred CCCCCcEEEECcEEEeeeccCCC------cCcCCCCC---------------ceEEEEeCCcHHHHHHHHHHHcCC----
Confidence 46777899999999999987542 22222110 124678899999999999999999
Q ss_pred CCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEe-cCCCCCCCCChh--hhhh
Q 011689 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAY-QGTSSTINYDPC--LVNL 274 (479)
Q Consensus 199 ~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~-~ga~~~l~~~~~--~~~~ 274 (479)
++.++|.||+|.+|+++++.|++.||+++++.. ++.+|+.++++++++|+|++..+ .++...++...+ ..+.
T Consensus 56 ----~~~~ig~vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (313)
T PRK09850 56 ----KAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHREF 131 (313)
T ss_pred ----CeEEEEEecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecCCCCEEEEecCchHhhhCCHHHHHHHHHH
Confidence 899999999999999999999999999988754 45579999999998899987654 244444443322 2345
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
+++++++++++. .+ .+.+..+++.+ .+.++++|+++.+. ...+..+++++|++++|++|++.|++...
T Consensus 132 ~~~~~~v~~~~~---~~--~~~~~~~~~~~--~g~~v~~D~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 199 (313)
T PRK09850 132 IQRAKVIVADCN---IS--EEALAWILDNA--ANVPVFVDPVSAWK-----CVKVRDRLNQIHTLKPNRLEAETLSGIAL 199 (313)
T ss_pred HhcCCEEEEeCC---CC--HHHHHHHHHhc--cCCCEEEEcCCHHH-----HHHHHhhhccceEEccCHHHHHHHhCCCC
Confidence 788999999753 23 35555555543 57899999875321 12234566899999999999999988542
Q ss_pred --CCcHHHHHH-HHhcCCCEEEEeecCCCeEEEEC-CeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 355 --KESPESTTR-YLSHFVPLVSVTDGARGSYIGVK-GEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 355 --~~~~~~a~~-~l~~g~~~VVVT~G~~Ga~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
.++.+.+.+ +.+.+++.||||+|++|++++.+ ++..++|++++++||||||||+|+|||+++|++|++ +++|+++
T Consensus 200 ~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfi~~l~~g~~-~~eal~~ 278 (313)
T PRK09850 200 SGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMP-FAESVRF 278 (313)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCceEEEEcCCCCeEecCCCCcccccCCCcHHHHHHHHHHHHHcCCC-HHHHHHH
Confidence 123444444 44678899999999999999874 456678888999999999999999999999999998 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 431 AARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 431 A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+++|+.+++..++....|+.++++.+++.
T Consensus 279 a~a~aa~~~~~~~~~~~~~~~~~~~~~~~~ 308 (313)
T PRK09850 279 AQGCSSMALSCEYTNNPDLSIANVISLVEN 308 (313)
T ss_pred HHHHHHHHhcCCCCCCcccCHHHHHHHHHH
Confidence 999999999999999999999999988873
No 18
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.
Probab=100.00 E-value=3.3e-40 Score=328.66 Aligned_cols=286 Identities=29% Similarity=0.394 Sum_probs=231.8
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|||++++|++...+.+. .........+||++.|+|++|++||. +
T Consensus 1 ~i~~iG~~~iD~~~~~~~~~-------------------------~~~~~~~~~~GG~~~N~a~~la~lg~--------~ 47 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGGRL-------------------------EQADSFRKFFGGAEANVAVGLARLGH--------R 47 (294)
T ss_pred CeEEechhheeeecCCCCcc-------------------------chhhccccccCChHHHHHHHHHhcCC--------c
Confidence 58999999999997654200 01235677899999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecC--CCCCCCCChhhhhhccCCcE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQG--TSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~g--a~~~l~~~~~~~~~l~~ad~ 280 (479)
+.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|+.+++.++.+|+|+++.+.+ +...++.+++....++++++
T Consensus 48 ~~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (294)
T cd01166 48 VALVTAVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEAALAGADH 127 (294)
T ss_pred eEEEEecCCCHHHHHHHHHHHHcCCCCceEEEeCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCCHHHHhCCCE
Confidence 99999999999999999999999999998854 5568999999998778998887754 33455555555566789999
Q ss_pred EEEeccccCCcc-hHHHHHHHHHHHHhcCCEEEEeCCChhhh--hhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCc
Q 011689 281 FIVEGYLFELPD-TIRTITKACEVAHRSGALVAVTASDVTCI--ERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKES 357 (479)
Q Consensus 281 v~i~g~~~~~~~-~~~~~~~~l~~ak~~g~~v~~D~~~~~~~--~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~ 357 (479)
||++++.+.... ..+.+.++++.+++.+.++++|++..... .....+.++.+++++|++++|+.|++.+++....++
T Consensus 128 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~ 207 (294)
T cd01166 128 LHLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTD 207 (294)
T ss_pred EEEcCcchhhCHHHHHHHHHHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCchh
Confidence 999988654332 14778889999999999999998742210 111223455678999999999999999988643222
Q ss_pred HHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011689 358 PES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAA 436 (479)
Q Consensus 358 ~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa 436 (479)
... +.++ ..+++.||||+|++|+++++++..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 208 ~~~~~~~l-~~g~~~viit~G~~G~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-~~~a~~~a~~~aa 285 (294)
T cd01166 208 AAERALAL-ALGVKAVVVKLGAEGALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-LEEALRFANAAAA 285 (294)
T ss_pred HHHHHHhh-cCCccEEEEEEcCCceEEEECCceEEeCCCCcccccCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHH
Confidence 222 2233 568999999999999999998888999999999999999999999999999999998 9999999999999
Q ss_pred HHhcccCC
Q 011689 437 TVVGQQGT 444 (479)
Q Consensus 437 ~~v~~~G~ 444 (479)
.+|++.|+
T Consensus 286 ~~i~~~G~ 293 (294)
T cd01166 286 LVVTRPGD 293 (294)
T ss_pred HHHhcCCC
Confidence 99999986
No 19
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=326.98 Aligned_cols=310 Identities=21% Similarity=0.266 Sum_probs=252.0
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
+++.|+|+|++++|++..+.. +| .+++ ++.+..+...+||+++|+|++++|||.
T Consensus 8 ~~~~vv~fGs~~~D~V~~~~~-----~p------------~~ge---~~~~~~f~~~~GG~~aN~AvaaarLG~------ 61 (330)
T KOG2855|consen 8 EPPLVVVFGSMLIDFVPSTRR-----LP------------NAGE---TWEPPGFKTAPGGKGANQAVAAARLGG------ 61 (330)
T ss_pred CCceEEEeccceeeeeecccc-----CC------------Cccc---cccCCcceecCCCcchhhhhHHHhcCc------
Confidence 456799999999999998764 22 1222 233458999999999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCC--ChhhhhhccC
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINY--DPCLVNLISK 277 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~--~~~~~~~l~~ 277 (479)
++.|||+||+|.||+.+++.|++.+|+++++... +.+|+++.+++..+|++.++.+.+++....+ .+++.+.++.
T Consensus 62 --~~afiGkvGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~~~~~i~~ 139 (330)
T KOG2855|consen 62 --RVAFIGKVGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSELNLEVIKE 139 (330)
T ss_pred --ceeeeecccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccccHHHHhh
Confidence 8999999999999999999999999999999754 5699999999999999999999998866554 4677888999
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhh-h--hhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTC-I--ERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~-~--~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
++++|+....+............++.+++.+..+++||....- . .......+..++..+|++.+..+|++.++|..+
T Consensus 140 ak~~~~q~ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~ 219 (330)
T KOG2855|consen 140 AKVFHCQSEILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIED 219 (330)
T ss_pred ccEEEEeeecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCcc
Confidence 9999998665433323333344466788888888888763210 0 011123356677899999999999999998732
Q ss_pred CCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEE-EeCCCCCCCCCccchhHHHHHHHHHHHHcC--CC--hHHHHHH
Q 011689 355 KESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAV-YIPPSPCVPVDTCGAGDAYASGILYGILRG--VS--DLKGMGA 429 (479)
Q Consensus 355 ~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~-~vpa~~v~vvDttGAGDaF~Agfl~~l~~g--~~--~l~eAl~ 429 (479)
.+. .++++.+.+.||||+|++|+.+|+++..- ++|+++|++||||||||+|+|||+.+|.+| .+ .++++++
T Consensus 220 ---~~~-~~L~~~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V~~VDtTGAGDsFvgal~~~L~~~~~~~~~~L~~~l~ 295 (330)
T KOG2855|consen 220 ---DKI-LKLWHMKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKVKAVDTTGAGDSFVGALAVQLVRGSLLPELSLEEALR 295 (330)
T ss_pred ---chH-HHHhccCCCEEEEEeCCCceEEEecCCCCCCCCCcccccccCCCchHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 122 47888888999999999999999876544 899999999999999999999999999998 31 3899999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHccc
Q 011689 430 LAARIAATVVGQQGTRLSVRHASELAESFAYRI 462 (479)
Q Consensus 430 ~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~ 462 (479)
+|+++|+.++++.|+.+++|+.++++..+....
T Consensus 296 ~A~a~~ai~v~~~Ga~~s~p~~~~~~~~~~~~~ 328 (330)
T KOG2855|consen 296 FANACGAITVQRKGAIPSMPTEKEVQSLLKSSV 328 (330)
T ss_pred HHHHhhhHHhhccCCCccCccHHHHHHHhhhcc
Confidence 999999999999999999999999998887543
No 20
>cd01945 ribokinase_group_B Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .
Probab=100.00 E-value=4.2e-40 Score=326.73 Aligned_cols=282 Identities=23% Similarity=0.278 Sum_probs=230.2
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|+|++++|++..++. +|.+ + +. .....+...+||+++|+|.+|++||. +
T Consensus 1 ~i~~iG~~~iD~~~~~~~-----~p~~-~-----------~~---~~~~~~~~~~GG~~~NvA~~l~~lG~--------~ 52 (284)
T cd01945 1 RVLGVGLAVLDLIYLVAS-----FPGG-D-----------GK---IVATDYAVIGGGNAANAAVAVARLGG--------Q 52 (284)
T ss_pred CEEEECcceeEEEEEecc-----CCCC-C-----------Ce---EEEeEEEEecCCHHHHHHHHHHHcCC--------C
Confidence 589999999999998754 2211 1 11 12236788999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFI 282 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~ 282 (479)
+.++|.||+|.+|+++++.|++.||++.++...+ .+|+.+++ ...+|++++..+.+....+..+++....+++++++|
T Consensus 53 ~~~~~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 131 (284)
T cd01945 53 ARLIGVVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSI-TDITGDRATISITAIDTQAAPDSLPDAILGGADAVL 131 (284)
T ss_pred eEEEEEecCchHHHHHHHHHHHcCCCccceeecCCCCCccEEE-EccCCCceEEEecCCCCCCCcccCCHHHhCcCCEEE
Confidence 9999999999999999999999999999987654 57888776 445777777777776666666666666689999999
Q ss_pred EeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHHHH
Q 011689 283 VEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPESTT 362 (479)
Q Consensus 283 i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~a~ 362 (479)
++++. .+...++++.++++|.++++|+..... .. ++.+++++|++++|++|++.+++.. ..+.+.
T Consensus 132 i~~~~------~~~~~~~~~~~~~~g~~v~~~~~~~~~-----~~-~~~~~~~~dil~~n~~e~~~l~~~~---~~~~~~ 196 (284)
T cd01945 132 VDGRQ------PEAALHLAQEARARGIPIPLDLDGGGL-----RV-LEELLPLADHAICSENFLRPNTGSA---DDEALE 196 (284)
T ss_pred EcCCC------HHHHHHHHHHHHHcCCCeeEeccCCcc-----cc-hHHHhccCCEEEeChhHHhhhcCCC---HHHHHH
Confidence 98753 356778889999999876666543211 11 4567789999999999999998753 223344
Q ss_pred HHHhcCCCEEEEeecCCCeEEEE-CCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 363 RYLSHFVPLVSVTDGARGSYIGV-KGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 363 ~~l~~g~~~VVVT~G~~Ga~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
.+.+.+++.||||+|++|+++++ +++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++|++
T Consensus 197 ~l~~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~l~~g~~-~~~al~~a~~~Aa~~~~~ 275 (284)
T cd01945 197 LLASLGIPFVAVTLGEAGCLWLERDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMP-LREALRFASAAAALKCRG 275 (284)
T ss_pred HHHhcCCcEEEEEECCCCeEEEcCCCCEEecCCCccccccCCCcHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHhc
Confidence 45567899999999999999998 6778899999999999999999999999999999998 999999999999999999
Q ss_pred cCCCCCCCC
Q 011689 442 QGTRLSVRH 450 (479)
Q Consensus 442 ~G~~~~~p~ 450 (479)
.|+..++|+
T Consensus 276 ~G~~~~~~~ 284 (284)
T cd01945 276 LGGRAGLPT 284 (284)
T ss_pred cCCcccCCC
Confidence 999987774
No 21
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.
Probab=100.00 E-value=6.8e-40 Score=326.75 Aligned_cols=282 Identities=27% Similarity=0.346 Sum_probs=230.9
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|+|++++|++...+. . .......+||++.|+|+++++||. +
T Consensus 1 ~ilviG~~~~D~~~~~~~---------~-------------------~~~~~~~~GG~~~n~a~~l~~lg~--------~ 44 (295)
T cd01167 1 KVVCFGEALIDFIPEGSG---------A-------------------PETFTKAPGGAPANVAVALARLGG--------K 44 (295)
T ss_pred CEEEEcceeEEEecCCCC---------C-------------------CccccccCCCcHHHHHHHHHhcCC--------C
Confidence 599999999999986542 0 125677899999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeee-eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCCh-hhhhhccCCcEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEP-IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDP-CLVNLISKTNIF 281 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~-~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~-~~~~~l~~ad~v 281 (479)
+.+++.+|+|.+|+.+++.|++.||++.++. ..+.+|+.++++++++|+|++..+.+......... +....+++++++
T Consensus 45 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 124 (295)
T cd01167 45 AAFIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTELNPDLLSEADIL 124 (295)
T ss_pred eEEEEeecCcHHHHHHHHHHHHcCCCchheeecCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCccCChhHhccCCEE
Confidence 9999999999999999999999999999886 45679999999998889999888877653332222 345567899999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh--hh-hhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcH
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESP 358 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~-~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~ 358 (479)
|++++.+..+...+.+.++++.+++.|.++++|++... +. .....+.++.+++++|++++|++|+..+++... ..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~--~~ 202 (295)
T cd01167 125 HFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEED--PE 202 (295)
T ss_pred EEechhhccchHHHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCC--HH
Confidence 99876332232356788899999999999999986321 10 111233456678999999999999999988532 12
Q ss_pred HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC-------ChHHHHHHHH
Q 011689 359 ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV-------SDLKGMGALA 431 (479)
Q Consensus 359 ~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~-------~~l~eAl~~A 431 (479)
+.+..+++.+++.+|||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+ + +++|+++|
T Consensus 203 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~a~~~~vvDttGAGD~f~a~~~~~l~~g~~~~~~~~~-~~~a~~~a 281 (295)
T cd01167 203 EIAALLLLFGLKLVLVTRGADGALLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDE-LAEALRFA 281 (295)
T ss_pred HHHHHHhhcCCCEEEEecCCcceEEEECCcceeeCCCCcceeeCCCccHHHHHHHHHHHHhCCcccccHHH-HHHHHHHH
Confidence 233446678999999999999999999888899999999999999999999999999999999 7 99999999
Q ss_pred HHHHHHHhcccCC
Q 011689 432 ARIAATVVGQQGT 444 (479)
Q Consensus 432 ~a~Aa~~v~~~G~ 444 (479)
+++|+.+|++.|+
T Consensus 282 ~~~aa~~~~~~G~ 294 (295)
T cd01167 282 NAVGALTCTKAGA 294 (295)
T ss_pred HHhhHHHhcccCC
Confidence 9999999999986
No 22
>cd01942 ribokinase_group_A Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=8.9e-40 Score=323.35 Aligned_cols=274 Identities=27% Similarity=0.339 Sum_probs=225.3
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|+|++++|++..++. +|.. +. ..........+||++.|+|++|++||. +
T Consensus 1 ~v~~iG~~~~D~~~~v~~-----~p~~-~~--------------~~~~~~~~~~~GG~~~Nva~~l~~lg~--------~ 52 (279)
T cd01942 1 DVAVVGHLNYDIILKVES-----FPGP-FE--------------SVLVKDLRREFGGSAGNTAVALAKLGL--------S 52 (279)
T ss_pred CEEEEecceeeeEeeccc-----CCCC-Cc--------------eEecceeeecCCcHHHHHHHHHHHcCC--------C
Confidence 599999999999998765 2211 11 012236789999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeee-eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEP-IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFI 282 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~-~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~ 282 (479)
+.++|.||+|.+|+++++.|++.||+++++. ..+.+|+.++++++.+|+|+++.++++...+++++ ....+++++++|
T Consensus 53 ~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 131 (279)
T cd01942 53 PGLVAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYPGAMDELEPND-EADPDGLADIVH 131 (279)
T ss_pred ceEEEEecCCcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcCCCCEEEEecCCcccccccCC-chhhhcccCEEE
Confidence 9999999999999999999999999999885 45568999999998889998887888776666655 455678999999
Q ss_pred EeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHH---HhhCCCCCCcHH
Q 011689 283 VEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEAR---AFCHFSSKESPE 359 (479)
Q Consensus 283 i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~---~L~g~~~~~~~~ 359 (479)
++++. .+.++++.+++.|.++++|++... .....+.++.+++++|++++|++|+. .+++.. ...
T Consensus 132 ~~~~~--------~~~~~~~~~~~~g~~v~~D~~~~~--~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~---~~~ 198 (279)
T cd01942 132 LSSGP--------GLIELARELAAGGITVSFDPGQEL--PRLSGEELEEILERADILFVNDYEAELLKERTGLS---EAE 198 (279)
T ss_pred eCCch--------HHHHHHHHHHHcCCeEEEcchhhh--hhccHHHHHHHHhhCCEEecCHHHHHHHHhhcCCC---hHH
Confidence 98652 356777788888999999987421 11223445667899999999999994 444432 211
Q ss_pred HHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCC-CCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 011689 360 STTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPS-PCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATV 438 (479)
Q Consensus 360 ~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~-~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~ 438 (479)
...+.+.||||+|++|++++.+++.+++|++ +++++|||||||+|+|||+++|++|++ +++|+++|+++|+++
T Consensus 199 -----~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-l~~al~~a~~~Aa~~ 272 (279)
T cd01942 199 -----LASGVRVVVVTLGPKGAIVFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYD-LEESLRLGNLAASLK 272 (279)
T ss_pred -----HhcCCCEEEEEECCCceEEEECCceEEccCcCcCCCcCCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHH
Confidence 1278899999999999999998888999987 889999999999999999999999998 999999999999999
Q ss_pred hcccCCC
Q 011689 439 VGQQGTR 445 (479)
Q Consensus 439 v~~~G~~ 445 (479)
+++.|++
T Consensus 273 ~~~~G~~ 279 (279)
T cd01942 273 VERRGAQ 279 (279)
T ss_pred HcccCCC
Confidence 9999863
No 23
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-40 Score=318.88 Aligned_cols=312 Identities=30% Similarity=0.461 Sum_probs=271.2
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
.+.+|++++|+...++.+|+++|+++.++..++++++.+...+.+........+||++-|+++++++++.. |. ++
T Consensus 9 l~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~----p~-~~ 83 (343)
T KOG2854|consen 9 LVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQ----PG-AT 83 (343)
T ss_pred eeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccC----CC-ce
Confidence 67789999999999999999999999999999999988888887778899999999999999999999873 22 79
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChh----hhhhccCCcE
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPC----LVNLISKTNI 280 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~----~~~~l~~ad~ 280 (479)
.|+|.||.|.+|+++++.+++.||+..+...++.+||+|.++++.++ |+++.+.|+...++.+++ ++..++++.+
T Consensus 84 ~f~GsvG~Dk~ge~l~~~~~~aGv~~~yq~~~d~~TGtCavli~~~n-RSL~anLgAAn~f~~dhl~~~~~~~lveka~v 162 (343)
T KOG2854|consen 84 VFFGSVGKDKFGELLKSKARAAGVNVHYQVKEDGPTGTCAVLITGDN-RSLCANLGAANCFKVDHLDKEENWALVEKAKV 162 (343)
T ss_pred EEEeeccCchHHHHHHHHHHhcCceEEEEeccCCCCceEEEEEeCCC-cchhhccchhhccCHHHhcchhhhhhhhheeE
Confidence 99999999999999999999999999998888999999999999766 999999999988887765 4457899999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC---CCCc
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFS---SKES 357 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~---~~~~ 357 (479)
+|+.|+++... ++++..+.+.+.+.+.+..++++. .++.+.+.+.+..+++++||++.|++|++.++... ..+.
T Consensus 163 ~yv~Gffltv~--p~ai~~v~qh~~e~~r~~~lnlsa-pfI~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~dv 239 (343)
T KOG2854|consen 163 FYVAGFFLTVS--PDAIRKVAQHAAENNRVFTLNLSA-PFISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKDV 239 (343)
T ss_pred EEEEEEEEEeC--hHHHHHHHHHHHHhcchhheeccc-hhHHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccch
Confidence 99999988764 688999999999988888888864 46778888999999999999999999999987533 2222
Q ss_pred HHHHHHHHh------cCCCEEEEeecCCCeEEEECCeEEEeCCCCC---CCCCccchhHHHHHHHHHHHHcCCChHHHHH
Q 011689 358 PESTTRYLS------HFVPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYASGILYGILRGVSDLKGMG 428 (479)
Q Consensus 358 ~~~a~~~l~------~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl 428 (479)
.+.+.+... ...++++||.|.+++++..++.....|..++ +++||+||||+|++||+++|.+|++ +++|+
T Consensus 240 ~eia~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~-l~~ci 318 (343)
T KOG2854|consen 240 KEIALKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKS-LEECI 318 (343)
T ss_pred HHHhhHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCC-HHHHH
Confidence 233333221 3467999999999999998887666665543 5899999999999999999999998 99999
Q ss_pred HHHHHHHHHHhcccCCCC
Q 011689 429 ALAARIAATVVGQQGTRL 446 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~ 446 (479)
+.|+.+|+.++...|+..
T Consensus 319 r~g~~aa~~vi~~~G~~~ 336 (343)
T KOG2854|consen 319 RAGSYAASHVIRRVGCTV 336 (343)
T ss_pred HHHHHHhhheeeccCCCC
Confidence 999999999999999873
No 24
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases. The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B ....
Probab=100.00 E-value=1e-39 Score=325.82 Aligned_cols=292 Identities=30% Similarity=0.409 Sum_probs=237.4
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
|.+|+|+|++++|++..++.. .+.. .........+||++.|+|++|++||.
T Consensus 1 m~~v~~iG~~~iD~~~~~~~~--------~~~~--------------~~~~~~~~~~GG~~~n~a~~l~~LG~------- 51 (301)
T PF00294_consen 1 MKKVLVIGEVNIDIIGYVDRF--------KGDL--------------VRVSSVKRSPGGAGANVAIALARLGA------- 51 (301)
T ss_dssp EEEEEEESEEEEEEEEESSSH--------TTSE--------------EEESEEEEEEESHHHHHHHHHHHTTS-------
T ss_pred CCcEEEECccceEEEeecCCc--------CCcc--------------eecceEEEecCcHHHHHHHHHHhccC-------
Confidence 357999999999999987641 1110 12247889999999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcE
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~ 280 (479)
++.+++.||+|.+|+.+++.|++.||+++++.+. +.+|+.++++++++|+|+++.+.+....++.+++....+.++++
T Consensus 52 -~v~~i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (301)
T PF00294_consen 52 -DVALIGKVGDDFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDPDGERTFVFSPGANSDLTPDELDEEAIDEADI 130 (301)
T ss_dssp -EEEEEEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEETTSEEEEEEEEGGGGGGGHHHHHHHHHHTESE
T ss_pred -cceEEeeccCcchhhhhhhccccccccccccccccccccceeEeeecccccceeeeccccccccccccccccccccccc
Confidence 8999999999999999999999999999988754 46999999999988999999999877777666666778889999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcC--CEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcH
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESP 358 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g--~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~ 358 (479)
+++++..+........+..+.+.+++.+ .+++.++.... +.+.+..+++++|++++|++|+..+++... ++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~dil~~n~~E~~~l~~~~~-~~~ 204 (301)
T PF00294_consen 131 LHLSGVSLPEGIPEDLLEALAKAAKKNGPFDPVFRDPSWDD-----LREDLKELLPYADILKPNEEEAEALTGSKI-DDP 204 (301)
T ss_dssp EEEESGHCSTTSHHHHHHHHHHHHHHTTEEEEEEEGGGSHH-----HHHHHHHHHHTSSEEEEEHHHHHHHHTCST-SSH
T ss_pred eeecccccccccccceeeecccccccccccccccccccccc-----cchhhhhhccccchhccccccccccccccc-cch
Confidence 9999922222222466666666666666 34444433211 234555667999999999999999998753 234
Q ss_pred HHHH----HHHhcCCCEEEEeecCCCeEEEECCeEEEeCC-CCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 011689 359 ESTT----RYLSHFVPLVSVTDGARGSYIGVKGEAVYIPP-SPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAAR 433 (479)
Q Consensus 359 ~~a~----~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa-~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a 433 (479)
+.+. +++..+++.+|||+|++|++++++++.+++++ ++++++|||||||+|+|||++++++|++ +++|+++|++
T Consensus 205 ~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~A~~i~~l~~~~~-~~~a~~~a~~ 283 (301)
T PF00294_consen 205 EDALAALRELQARGVKIVIVTLGEDGALYYTNDESYHVPPVPPVNVVDTTGAGDAFAAGFIYGLLSGMS-LEEALKFANA 283 (301)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEEGGGEEEEEETTEEEEEEEESSSSSSSCTTHHHHHHHHHHHHHHTTHH-HHHHHHHHHH
T ss_pred hhhhccccccchhhhhhhhccccccCcccccccccccccccccccccceeccchhhhHHHHHHHHcCCC-HHHHHHHHHH
Confidence 4433 34457999999999999999999999999988 5689999999999999999999999998 9999999999
Q ss_pred HHHHHhcccCCCCCCCC
Q 011689 434 IAATVVGQQGTRLSVRH 450 (479)
Q Consensus 434 ~Aa~~v~~~G~~~~~p~ 450 (479)
+|+.+|++.|+..++|+
T Consensus 284 ~aa~~v~~~g~~~~~p~ 300 (301)
T PF00294_consen 284 AAALKVQQPGPRSPLPT 300 (301)
T ss_dssp HHHHHHTSSSSSGGTT-
T ss_pred HHHHHhCCCCCcCCCCC
Confidence 99999999999998887
No 25
>TIGR02152 D_ribokin_bact ribokinase. This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not.
Probab=100.00 E-value=1.6e-38 Score=316.91 Aligned_cols=286 Identities=25% Similarity=0.361 Sum_probs=236.2
Q ss_pred cCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEE
Q 011689 129 GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTG 208 (479)
Q Consensus 129 G~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig 208 (479)
|.+++|++..+++ +|. +++. +....+..++||++.|+|++|++||. ++.+++
T Consensus 1 G~~~~D~~~~~~~-----~p~------------~~~~---~~~~~~~~~~GG~~~Nva~~l~~lg~--------~~~~~~ 52 (293)
T TIGR02152 1 GSINMDLVLRTDR-----LPK------------PGET---VHGHSFQIGPGGKGANQAVAAARLGA--------EVSMIG 52 (293)
T ss_pred CCceEeEEEEeCC-----CCC------------CCCc---EecCCceecCCCcHHHHHHHHHHCCC--------CEEEEE
Confidence 7899999998875 221 1111 12346789999999999999999999 899999
Q ss_pred EeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEEEECCCCCeEEEEecCCCCCCCCChhh--hhhccCCcEEEEec
Q 011689 209 SVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--VNLISKTNIFIVEG 285 (479)
Q Consensus 209 ~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~--~~~l~~ad~v~i~g 285 (479)
.||+|.+|+.+++.|++.||++.++...+ .+|+.++++++++|+|+++.++++...+.++++. .+.+..++++++++
T Consensus 53 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (293)
T TIGR02152 53 KVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDAAEALIAESDIVLLQL 132 (293)
T ss_pred EecCCccHHHHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcCCCCEEEEEECCcCCcCCHHHHHHHHhhhccCCEEEEec
Confidence 99999999999999999999999887554 5899999999888999998888877666665544 34578999999874
Q ss_pred cccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC--CCcHHH-HH
Q 011689 286 YLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS--KESPES-TT 362 (479)
Q Consensus 286 ~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~--~~~~~~-a~ 362 (479)
. .+ .+.+.++++.+++++.++++|++... . ...+.+++++|++++|++|++.+++... .++.+. +.
T Consensus 133 ~---~~--~~~~~~~~~~~~~~~~~v~~D~~~~~--~----~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~ 201 (293)
T TIGR02152 133 E---IP--LETVLEAAKIAKKHGVKVILNPAPAI--K----DLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAE 201 (293)
T ss_pred C---CC--HHHHHHHHHHHHHcCCEEEEECCcCc--c----cchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHH
Confidence 2 23 56788899999999999999986431 1 1124566899999999999999988642 223333 34
Q ss_pred HHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhccc
Q 011689 363 RYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 363 ~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
.+.+.+++.+|||+|++|+++++++..+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+.++++.
T Consensus 202 ~l~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~vdt~GAGDaf~Ag~l~~l~~g~~-~~~al~~a~~~Aa~~~~~~ 280 (293)
T TIGR02152 202 KLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKS-LEDAIRFANAAAAISVTRK 280 (293)
T ss_pred HHHHcCCCeEEEEeCCCceEEEeCCceeEccCCCCceeCCCCcHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHccc
Confidence 455678999999999999999998888889999999999999999999999999999998 9999999999999999999
Q ss_pred CCCCCCCCHHHH
Q 011689 443 GTRLSVRHASEL 454 (479)
Q Consensus 443 G~~~~~p~~~el 454 (479)
|+...+|+.+++
T Consensus 281 G~~~~~~~~~~~ 292 (293)
T TIGR02152 281 GAQSSIPYLEEV 292 (293)
T ss_pred CcccCCCChHHc
Confidence 999888887765
No 26
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.
Probab=100.00 E-value=1.1e-38 Score=313.42 Aligned_cols=262 Identities=26% Similarity=0.319 Sum_probs=215.4
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|+|++++|++.. .....+||++.|+|.+|++||. +
T Consensus 1 ~v~~iG~~~~D~~~~----------------------------------~~~~~~GG~~~Nva~~la~lG~--------~ 38 (264)
T cd01940 1 RLAAIGDNVVDKYLH----------------------------------LGKMYPGGNALNVAVYAKRLGH--------E 38 (264)
T ss_pred CeEEEcceEEEEecc----------------------------------CceecCCCcHHHHHHHHHHcCC--------C
Confidence 589999999999864 1346799999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEec-CCCCCCCCChhhhhhccCCcEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ-GTSSTINYDPCLVNLISKTNIFI 282 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~-ga~~~l~~~~~~~~~l~~ad~v~ 282 (479)
+.+++.||+|.+|+.+++.|++.||+++++...+.+|+.+++. .++|+|+++.+. ++.....+.+.....+++++++|
T Consensus 39 ~~~~~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~-~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 117 (264)
T cd01940 39 SAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVE-LVDGDRIFGLSNKGGVAREHPFEADLEYLSQFDLVH 117 (264)
T ss_pred eeEEecccCchhHHHHHHHHHHcCCChhheEEcCCCCceEEEE-ecCCceEEEeecCCcHHhcccCcccHhHHhcCCEEE
Confidence 9999999999999999999999999999887766788888855 467889877664 44333322233334578999999
Q ss_pred EeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHH-HH
Q 011689 283 VEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPE-ST 361 (479)
Q Consensus 283 i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~-~a 361 (479)
++++.. .+.+.++++.+++++++|++|++... ..+.++.+++++|++++|++|... ...+ .+
T Consensus 118 ~~~~~~-----~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~-------~~~~~~~ 180 (264)
T cd01940 118 TGIYSH-----EGHLEKALQALVGAGALISFDFSDRW-----DDDYLQLVCPYVDFAFFSASDLSD-------EEVKAKL 180 (264)
T ss_pred Eccccc-----HHHHHHHHHHHHHcCCEEEEcCcccC-----CHHHHHhhcccCCEEEechhhcCc-------chHHHHH
Confidence 997542 45688899999999999999997532 123355678999999999877531 2233 34
Q ss_pred HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 362 TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 362 ~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
.++++.+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++++++|+++|+++|++++++
T Consensus 181 ~~l~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~~~~~al~~a~~~aa~~~~~ 260 (264)
T cd01940 181 KEAVSRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAGGTAIAEAMRQGAQFAAKTCGH 260 (264)
T ss_pred HHHHHcCCCEEEEEECCCCeEEEeCCeEEecCCcCCCCCCCCCchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcc
Confidence 55667899999999999999999988888999999999999999999999999999999843999999999999999999
Q ss_pred cCCC
Q 011689 442 QGTR 445 (479)
Q Consensus 442 ~G~~ 445 (479)
.|+.
T Consensus 261 ~G~~ 264 (264)
T cd01940 261 EGAF 264 (264)
T ss_pred cCCC
Confidence 9963
No 27
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=1.3e-38 Score=313.24 Aligned_cols=265 Identities=20% Similarity=0.256 Sum_probs=215.8
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|+|++++|++..++. +| .++.. .....+...+||++.|+|++|++||. +
T Consensus 1 ~il~iG~~~iD~~~~~~~-----~~-~~~~~--------------~~~~~~~~~~GG~~~Nva~~l~~lG~--------~ 52 (265)
T cd01947 1 KIAVVGHVEWDIFLSLDA-----PP-QPGGI--------------SHSSDSRESPGGGGANVAVQLAKLGN--------D 52 (265)
T ss_pred CEEEEeeeeEEEEEEecC-----CC-CCCce--------------eecccceeecCchHHHHHHHHHHcCC--------c
Confidence 589999999999998764 11 11111 12236789999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIV 283 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i 283 (479)
+.++|.||+|.+|+.+++.|++ ++++..++..+..|+.++++++++|+|+++.+.+.. +.+.....+.+++++|+
T Consensus 53 ~~~i~~vG~D~~g~~i~~~l~~-~~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~----~~~~~~~~~~~~~~~~~ 127 (265)
T cd01947 53 VRFFSNLGRDEIGIQSLEELES-GGDKHTVAWRDKPTRKTLSFIDPNGERTITVPGERL----EDDLKWPILDEGDGVFI 127 (265)
T ss_pred eEEEEEecCChHHHHHHHHHHh-cCCcceEEecCCCCceEEEEECCCCcceEEecCCCC----cccCCHhHhccCCEEEE
Confidence 9999999999999999999999 999887776667899999999988999887655432 23334456788999999
Q ss_pred eccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHHHHH
Q 011689 284 EGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPESTTR 363 (479)
Q Consensus 284 ~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~a~~ 363 (479)
+++. + ..++++.+++.+ .+++|+.... . ...++.+++++|++++|++|+..+++ +..
T Consensus 128 ~~~~---~-----~~~~~~~a~~~~-~~~~d~~~~~---~--~~~~~~~~~~~d~~~~n~~e~~~l~~---------~~~ 184 (265)
T cd01947 128 TAAA---V-----DKEAIRKCRETK-LVILQVTPRV---R--VDELNQALIPLDILIGSRLDPGELVV---------AEK 184 (265)
T ss_pred eccc---c-----cHHHHHHHHHhC-CeEeccCccc---c--chhHHHHhhhCCEEEeCHHHHHHhhh---------HHH
Confidence 9763 1 235566677665 5677875321 1 12345677899999999999998753 445
Q ss_pred HHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcccC
Q 011689 364 YLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQQG 443 (479)
Q Consensus 364 ~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~~G 443 (479)
++..+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+.++++.|
T Consensus 185 ~~~~~~~~viit~G~~Ga~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-~~~al~~a~~~Aa~~v~~~G 263 (265)
T cd01947 185 IAGPFPRYLIVTEGELGAILYPGGRYNHVPAKKAKVPDSTGAGDSFAAGFIYGLLKGWS-IEEALELGAQCGAICVSHFG 263 (265)
T ss_pred HHhccCCEEEEEeCCCCeEEEECCeeEECCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHhccC
Confidence 66778999999999999999998888999999999999999999999999999999998 99999999999999999998
Q ss_pred CC
Q 011689 444 TR 445 (479)
Q Consensus 444 ~~ 445 (479)
++
T Consensus 264 ~~ 265 (265)
T cd01947 264 PY 265 (265)
T ss_pred CC
Confidence 63
No 28
>TIGR03828 pfkB 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).
Probab=100.00 E-value=7.1e-38 Score=313.72 Aligned_cols=289 Identities=21% Similarity=0.227 Sum_probs=232.0
Q ss_pred EEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccEEE
Q 011689 127 GLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAM 206 (479)
Q Consensus 127 viG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ 206 (479)
|.=++.+|+++.+++ +| +|... .......++||++.|+|++|++||. ++.+
T Consensus 4 ~~~~~~~D~~~~~~~-----~~--~g~~~--------------~~~~~~~~~GG~~~NvA~~la~lG~--------~v~~ 54 (304)
T TIGR03828 4 VTLNPAIDLTIELDG-----LT--LGEVN--------------RVESTRIDAGGKGINVSRVLKNLGV--------DVVA 54 (304)
T ss_pred EEcchHHeEEEEccc-----cc--cCcee--------------ecccccccCCccHHHHHHHHHHcCC--------CeEE
Confidence 445889999999876 22 22211 2236788999999999999999999 8999
Q ss_pred EEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh------hhhccCCcE
Q 011689 207 TGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL------VNLISKTNI 280 (479)
Q Consensus 207 ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~------~~~l~~ad~ 280 (479)
+|.||+| +|+.+++.|++.||+++++... ..|++++++++.+|+++++.+.+.. ++..++. .+.++++++
T Consensus 55 is~vG~D-~g~~~~~~L~~~gId~~~~~~~-~~t~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~ 130 (304)
T TIGR03828 55 LGFLGGF-TGDFIEALLREEGIKTDFVRVP-GETRINVKIKEPSGTETKLNGPGPE--ISEEELEALLEKLRAQLAEGDW 130 (304)
T ss_pred EEEecCc-hhHHHHHHHHHCCCcceEEECC-CCCeeeEEEEeCCCCEEEEECCCCC--CCHHHHHHHHHHHHHhccCCCE
Confidence 9999999 6999999999999999988765 4678888888878888888776643 4333221 235789999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC--CcH
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK--ESP 358 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~--~~~ 358 (479)
+|++++..... ..+.+..+++.+++.+.++++|++... +++.+...+|++++|++|++.+++.... ++.
T Consensus 131 v~~~g~~~~~~-~~~~~~~~~~~~~~~~~~v~~D~~~~~--------~~~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~ 201 (304)
T TIGR03828 131 LVLSGSLPPGV-PPDFYAELIALAREKGAKVILDTSGEA--------LRDGLKAKPFLIKPNDEELEELFGRELKTLEEI 201 (304)
T ss_pred EEEECCCCCCC-CHHHHHHHHHHHHHcCCEEEEECChHH--------HHHHHhcCCcEECcCHHHHHHHhCCCCCCHHHH
Confidence 99998754321 256788899999999999999986421 1222334689999999999999986422 223
Q ss_pred HH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 011689 359 ES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAAT 437 (479)
Q Consensus 359 ~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~ 437 (479)
.+ +..+++.+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.
T Consensus 202 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a~~l~~l~~g~~-~~~a~~~a~~~Aa~ 280 (304)
T TIGR03828 202 IEAARELLDLGAENVLISLGADGALLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESGLS-LEEALRLAVAAGSA 280 (304)
T ss_pred HHHHHHHHHcCCCEEEEccCCCCcEEEcCCceEEEeCCCccccCCcChHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHH
Confidence 33 34466778999999999999999988877889998899999999999999999999999998 99999999999999
Q ss_pred HhcccCCCCCCCCHHHHHHHHHc
Q 011689 438 VVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 438 ~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+|++.|+. +|+++++++++..
T Consensus 281 ~~~~~G~~--~p~~~~~~~~~~~ 301 (304)
T TIGR03828 281 AAFSEGTG--LPDPEDIEELLPQ 301 (304)
T ss_pred HhcCcCCC--CCCHHHHHHHHhc
Confidence 99999975 7899999887763
No 29
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose. KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism.
Probab=100.00 E-value=1.8e-38 Score=316.53 Aligned_cols=275 Identities=20% Similarity=0.264 Sum_probs=216.2
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
.|+|+|++++|++..++. +|. .+... ........+||+++|+|++|++||. +
T Consensus 1 ~v~~iG~~~vD~~~~v~~-----~p~-~~~~~--------------~~~~~~~~~GG~a~NvA~~la~lG~--------~ 52 (290)
T cd01939 1 AVLCVGLTVLDFITTVDK-----YPF-EDSDQ--------------RTTNGRWQRGGNASNSCTVLRLLGL--------S 52 (290)
T ss_pred CEEEEeeeeeEEEeeecC-----CCC-CCcce--------------EeeeeeEecCCCHHHHHHHHHHcCC--------c
Confidence 489999999999998875 222 11111 1124567899999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFI 282 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~ 282 (479)
+.++|.||+|++|+++++.|++.||++.++...+ ..+..++++++++|+|+++.+.++...++.+++....+++++++|
T Consensus 53 ~~~~~~vG~D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
T cd01939 53 CEFLGVLSRGPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSRAGGRTTIVNDNNLPEVTYDDFSKIDLTQYGWIH 132 (290)
T ss_pred eEEEEeecCCHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcCCCCeEEEEeCCCCCCCCHHHHhhhhhccCCEEE
Confidence 9999999999999999999999999999875444 456667777777899999888887777776666555568999999
Q ss_pred EeccccCCcchHHHHHHHHHHHHhcC-------CEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC
Q 011689 283 VEGYLFELPDTIRTITKACEVAHRSG-------ALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK 355 (479)
Q Consensus 283 i~g~~~~~~~~~~~~~~~l~~ak~~g-------~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~ 355 (479)
++++.+ ....++++.+++.+ .++++|+... .++ +..+++++|++++|++|++.+ +..
T Consensus 133 ~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~------~~~-~~~~l~~~di~~~n~~~~~~~-~~~-- 196 (290)
T cd01939 133 FEGRNP------DETLRMMQHIEEHNNRRPEIRITISVEVEKP------REE-LLELAAYCDVVFVSKDWAQSR-GYK-- 196 (290)
T ss_pred EeccCH------HHHHHHHHHHHHhcCcCCCcceEEEEEeccC------chh-hhhHHhhCCEEEEEhHHHHhc-CcC--
Confidence 998642 33456666777665 6788887521 122 235778999999999998864 532
Q ss_pred CcHHHHHHH---HhcCCCEEEEeecCCCeEEEEC-CeEEEeCCCCC-CCCCccchhHHHHHHHHHHHHcCC-ChHHHHHH
Q 011689 356 ESPESTTRY---LSHFVPLVSVTDGARGSYIGVK-GEAVYIPPSPC-VPVDTCGAGDAYASGILYGILRGV-SDLKGMGA 429 (479)
Q Consensus 356 ~~~~~a~~~---l~~g~~~VVVT~G~~Ga~~~~~-~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~-~~l~eAl~ 429 (479)
+.+.+.+. ...+++.||||+|++|++++.+ ++.+++|+++. ++||||||||+|+|||++++++|+ + +++|++
T Consensus 197 -~~~~~~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvDt~GAGDsf~agfl~~l~~g~~~-~~~a~~ 274 (290)
T cd01939 197 -SPEECLRGEGPRAKKAALLVCTWGDQGAGALGPDGEYVHSPAHKPIRVVDTLGAGDTFNAAVIYALNKGPDD-LSEALD 274 (290)
T ss_pred -CHHHHHHhhhhhccCCcEEEEEcccCCeEEEcCCCCEEEecCCCCCCcccCCCchHHHHHHHHHHHHcCCcc-HHHHHH
Confidence 23333222 2347889999999999998875 56778998875 699999999999999999999999 6 999999
Q ss_pred HHHHHHHHHhcccCC
Q 011689 430 LAARIAATVVGQQGT 444 (479)
Q Consensus 430 ~A~a~Aa~~v~~~G~ 444 (479)
+|+++|++++++.|.
T Consensus 275 ~a~a~aa~~i~~~G~ 289 (290)
T cd01939 275 FGNRVASQKCTGVGF 289 (290)
T ss_pred HHHHHHHHHHhhhcC
Confidence 999999999999884
No 30
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.
Probab=100.00 E-value=2.1e-38 Score=317.48 Aligned_cols=287 Identities=23% Similarity=0.226 Sum_probs=222.5
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|||+.++|+++.++.. +++.+.. ... .........+|| ++|+|.+|++||. +
T Consensus 1 ~vl~iG~~~~D~~~~~~~~---~~~~~~~----------~~~---~~~~~~~~~~GG-~~NvA~~la~LG~--------~ 55 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVE---RISPEAP----------VPV---VKVEREEIRLGG-AANVANNLASLGA--------K 55 (304)
T ss_pred CEEEEcceeEEeeEeeccc---cccCCCC----------cce---EEeeeEEecCcH-HHHHHHHHHHhCC--------C
Confidence 5899999999999875310 0111100 000 011246678999 5899999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCC------hhhhhhccC
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD------PCLVNLISK 277 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~------~~~~~~l~~ 277 (479)
+.++|.||+|.+|+++++.|++.||++.+++.++.+|+.+++++++ +++.+..+.+....++.. +.....+++
T Consensus 56 ~~~i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (304)
T cd01172 56 VTLLGVVGDDEAGDLLRKLLEKEGIDTDGIVDEGRPTTTKTRVIAR-NQQLLRVDREDDSPLSAEEEQRLIERIAERLPE 134 (304)
T ss_pred eEEEEEEcCCccHHHHHHHHHhCCCCcceEecCCCCceEEEEEecC-CcEEEEEecCCCCCCCHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999998865555678888887764 566555554443334322 222345789
Q ss_pred CcEEEEeccccC-CcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC--
Q 011689 278 TNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS-- 354 (479)
Q Consensus 278 ad~v~i~g~~~~-~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~-- 354 (479)
++++|++++... ++ .+.+.++++.+++.+.++++|++...+ .+++++|++++|++|++.+++...
T Consensus 135 ~~~v~~s~~~~~~~~--~~~~~~~~~~a~~~~~~v~~D~~~~~~----------~~~~~~d~l~~n~~E~~~l~~~~~~~ 202 (304)
T cd01172 135 ADVVILSDYGKGVLT--PRVIEALIAAARELGIPVLVDPKGRDY----------SKYRGATLLTPNEKEAREALGDEIND 202 (304)
T ss_pred CCEEEEEcCCCCccC--HHHHHHHHHHHHhcCCCEEEeCCCcch----------hhccCCcEeCCCHHHHHHHhCCCCCC
Confidence 999999876532 23 467888999999999999999875321 245789999999999999988632
Q ss_pred CCcHHHHHH-HH-hcCCCEEEEeecCCCeEEEE-CCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHH
Q 011689 355 KESPESTTR-YL-SHFVPLVSVTDGARGSYIGV-KGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALA 431 (479)
Q Consensus 355 ~~~~~~a~~-~l-~~g~~~VVVT~G~~Ga~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A 431 (479)
.++.+++.+ ++ ..+++.||||+|++|+++++ +++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|
T Consensus 203 ~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~ag~i~~l~~g~~-~~~al~~a 281 (304)
T cd01172 203 DDELEAAGEKLLELLNLEALLVTLGEEGMTLFERDGEVQHIPALAKEVYDVTGAGDTVIATLALALAAGAD-LEEAAFLA 281 (304)
T ss_pred hHHHHHHHHHHHHHhCCCeEEEEcCCCccEEEcCCCcEEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-HHHHHHHH
Confidence 123344433 44 35899999999999999998 7778999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHhcccCCCCCCC
Q 011689 432 ARIAATVVGQQGTRLSVR 449 (479)
Q Consensus 432 ~a~Aa~~v~~~G~~~~~p 449 (479)
+++|+.+|++.|+....|
T Consensus 282 ~a~Aa~~~~~~g~~~~~~ 299 (304)
T cd01172 282 NAAAGVVVGKVGTAPVTP 299 (304)
T ss_pred HHHhheeeecCCCCCcCH
Confidence 999999999999886643
No 31
>PRK13508 tagatose-6-phosphate kinase; Provisional
Probab=100.00 E-value=3.9e-37 Score=309.79 Aligned_cols=291 Identities=19% Similarity=0.210 Sum_probs=229.1
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
+.+..++++|++..++. + +.++... ...+...+||++.|+|++|++||. ++
T Consensus 3 ~~~t~np~~D~~~~~~~-----~--~~~~~~~--------------~~~~~~~~GG~~~NvA~~la~LG~--------~~ 53 (309)
T PRK13508 3 LTVTLNPSIDISYPLDE-----L--KLDTVNR--------------VVDVSKTAGGKGLNVTRVLSEFGE--------NV 53 (309)
T ss_pred EEEecChHHeEEEEeCC-----e--eeCCeEE--------------ecceeecCCchHHHHHHHHHHcCC--------Ce
Confidence 45668999999999875 2 2222211 235778899999999999999999 89
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChh------hhhhccCC
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPC------LVNLISKT 278 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~------~~~~l~~a 278 (479)
.++|.||+ .+|+++++.|++ ||++.+++. +..|+.++++++ +|+|+++.++++. +..++. ..+.+.++
T Consensus 54 ~~~~~vGd-~~G~~i~~~l~~-gI~~~~~~~-~~~t~~~~~~~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 127 (309)
T PRK13508 54 LATGLIGG-ELGQFIAEHLDD-QIKHAFYKI-KGETRNCIAILH-EGQQTEILEKGPE--ISVQEADGFLHHFKQLLESV 127 (309)
T ss_pred EEEEEecC-hhHHHHHHHHHc-CCCceEEEC-CCCCeeeEEEEe-CCCEEEEECCCCC--CCHHHHHHHHHHHHHhccCC
Confidence 99999996 689999999999 999987654 346788887776 7899988777753 333221 13457899
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcH
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESP 358 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~ 358 (479)
+++|++|+.+... ..+.+.++++.+++.|.++++|++.... ... ...+..+|++++|++|++.+++....++.
T Consensus 128 ~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~~-----~~~-~~~~~~~dii~~n~~E~~~l~g~~~~~~~ 200 (309)
T PRK13508 128 EVVAISGSLPAGL-PVDYYAQLIELANQAGKPVVLDCSGAAL-----QAV-LESPYKPTVIKPNIEELSQLLGKEVSEDL 200 (309)
T ss_pred CEEEEeCCCCCCc-CHHHHHHHHHHHHHCCCEEEEECCcHHH-----HHH-HhccCCceEEccCHHHHHHHhCCCCCCCH
Confidence 9999998764332 2466788999999999999999975321 111 12246899999999999999986432233
Q ss_pred HHH----HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 359 EST----TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 359 ~~a----~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
+.+ .+++..+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 201 ~~~~~~~~~~~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Agfi~~l~~g~~-~~~al~~a~a~ 279 (309)
T PRK13508 201 DELKEVLQQPLFEGIEWIIVSLGADGAFAKHNDTFYKVDIPKIEVVNPVGSGDSTVAGIASGLLHQED-DADLLKKANVL 279 (309)
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCceEEEeCCceEEEeCCCccccCCcChhHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 222 2344568999999999999999888888889999999999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|++++++.+.. ..+..++++++++
T Consensus 280 aa~~~~~~~~~--~~~~~~~~~~~~~ 303 (309)
T PRK13508 280 GMLNAQEKQTG--HVNMANYDELYNQ 303 (309)
T ss_pred HHHHhcCcCcC--CCCHHHHHHHHhc
Confidence 99999999876 4577777777654
No 32
>PRK09954 putative kinase; Provisional
Probab=100.00 E-value=2.6e-37 Score=317.95 Aligned_cols=299 Identities=18% Similarity=0.182 Sum_probs=225.1
Q ss_pred CCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCC
Q 011689 118 VLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPI 197 (479)
Q Consensus 118 ~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~ 197 (479)
.+.+...|+|+|.+++|++..++.. +| .++. ........+||++.|+|++++|||.
T Consensus 53 ~l~~~~~v~viG~~~vD~~~~~~~~----~p--~~~~---------------~~~~~~~~~GG~~~NvA~~larLG~--- 108 (362)
T PRK09954 53 ILTEQEYCVVVGAINMDIRGMADIR----YP--QAAS---------------HPGTIHCSAGGVGRNIAHNLALLGR--- 108 (362)
T ss_pred EEcCCccEEEEEEEEEEEEEeeCCc----Cc--CCCC---------------CCceEEEecCcHHHHHHHHHHHcCC---
Confidence 3344557999999999999887521 11 1111 1125678899999999999999999
Q ss_pred CCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecC--CCCCCCCChhh--h
Q 011689 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQG--TSSTINYDPCL--V 272 (479)
Q Consensus 198 ~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~g--a~~~l~~~~~~--~ 272 (479)
++.|+|.||+|.+|+++++.|++.||+++++.. ++.+|+.++++.++++ ++++.+.+ ....++++.+. .
T Consensus 109 -----~v~~ig~VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 182 (362)
T PRK09954 109 -----DVHLLSAIGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANRQD-ETVLAINDTHILQQLTPQLLNGSR 182 (362)
T ss_pred -----CeEEEEEECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcCCC-CEEEEEcCchhhhcCCHHHHHHHH
Confidence 899999999999999999999999999988765 4457888888877554 44454543 23345443322 2
Q ss_pred hhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 273 NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
..+..++++++++. .+ .+.+..+++.+ +++++++|+.+... ...++.+++++|++++|++|++.++|.
T Consensus 183 ~~~~~~~~v~~~~~---~~--~~~~~~~~~~a--~~~~v~~D~~~~~~-----~~~~~~~l~~~dil~~n~~Ea~~l~g~ 250 (362)
T PRK09954 183 DLIRHAGVVLADCN---LT--AEALEWVFTLA--DEIPVFVDTVSEFK-----AGKIKHWLAHIHTLKPTQPELEILWGQ 250 (362)
T ss_pred HHHhcCCEEEEECC---CC--HHHHHHHHHhC--CCCcEEEECCCHHH-----hhhhhhhhccccEEecCHHHHHHHcCC
Confidence 44678999998753 33 34455555554 47899999875321 122345678999999999999999986
Q ss_pred CCCC--cHHHHH-HHHhcCCCEEEEeecCCCeEEEEC-CeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHH
Q 011689 353 SSKE--SPESTT-RYLSHFVPLVSVTDGARGSYIGVK-GEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMG 428 (479)
Q Consensus 353 ~~~~--~~~~a~-~~l~~g~~~VVVT~G~~Ga~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl 428 (479)
...+ +.+.+. .+++.|++.||||+|++|++++.. ++.+++|++++++||||||||+|+|||++++++|++ +++|+
T Consensus 251 ~~~~~~~~~~~~~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Ag~l~~l~~g~~-~~eal 329 (362)
T PRK09954 251 AITSDADRNAAVNALHQQGVQQIFVYLPDESVFCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYS-FRDSA 329 (362)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEEeCCccEEEEeCCCceEeccCCCcccccccchHHHHHHHHHHHHHcCCC-HHHHH
Confidence 4221 233444 455789999999999999988874 456778999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011689 429 ALAARIAATVVGQQGTRLSVRHASELAESFA 459 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~ 459 (479)
++|+++|++++....+..+-.+.+.++++++
T Consensus 330 ~~a~a~Aal~~~s~~~~~~~~~~~~~~~~~~ 360 (362)
T PRK09954 330 RFAMACAAISRASGSLNNPTLSADNALSLVP 360 (362)
T ss_pred HHHHHHHHHHhcCCCcCCCcCCHHHHHHHhc
Confidence 9999999999775555545577888877764
No 33
>cd01943 MAK32 MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.
Probab=100.00 E-value=2.4e-38 Score=321.33 Aligned_cols=279 Identities=14% Similarity=0.106 Sum_probs=224.7
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhC-CCCCCCCCc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLG-GKPIGGPAL 202 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG-~~~~~~~~~ 202 (479)
+|+++|++++|++...+. ..+...+||+++|+|+++++|| .+ .
T Consensus 1 ~~~~~G~~~~d~i~~~~~------------------------------~~~~~~~GG~~~N~A~~~~~l~g~~------~ 44 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------------------------------EPVTNVLGGAGTYAILGARLFLPPP------L 44 (328)
T ss_pred CccccCcEEeeccccCCC------------------------------CccccccCCchhhHhhceeeecCCc------c
Confidence 489999999999987431 1456789999999999999994 20 0
Q ss_pred cE--EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcE
Q 011689 203 NV--AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 203 ~v--~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~ 280 (479)
++ .+++.+|+| +|+++++.|++.||++++.+..+.+|+.++++++++|+|.++.+.+.+..++.+++....+..+++
T Consensus 45 ~~~~~~~~~vG~D-~G~~l~~~L~~~GVd~~~~~~~~~~Tg~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~~~~a~~ 123 (328)
T cd01943 45 SRSISWIVDKGSD-FPKSVEDELESWGTGMVFRRDPGRLTTRGLNIYDGNDRRFFKYLTPKKRIDVSDDLNSTPLIRSSC 123 (328)
T ss_pred ccceeeEEecCCC-CCHHHHHHHHhcCCceEEEeCCCCcchhhhhhcCCCCcceeeecCcccccccccccccccccCCCe
Confidence 35 889999999 999999999999999988334556899999988888899988888877777777776666789999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHh------cCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHR------SGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~------~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
+|+++.... ..+...++++.+++ .+..+++|+++...... ..+.+..+++++|++++|++|++.|++...
T Consensus 124 ~hl~~~~~~---~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~~~~-~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~ 199 (328)
T cd01943 124 IHLICSPER---CASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSCDPE-NLEDLLQALPRVDVFSPNLEEAARLLGLPT 199 (328)
T ss_pred EEEECCHHH---HHHHHHHHHHHHHhhccccCCccEEEEecCCcccChh-hHHHHHHHhccCCEECCCHHHHHHHhCCCC
Confidence 999875321 23677888888888 88999999864322111 123456788999999999999999998653
Q ss_pred CCc--HHH-H-----H---HHHhcCCCEEEEeecCCCeEEEE--CCeEEEeCCCCC---CCCCccchhHHHHHHHHHHHH
Q 011689 355 KES--PES-T-----T---RYLSHFVPLVSVTDGARGSYIGV--KGEAVYIPPSPC---VPVDTCGAGDAYASGILYGIL 418 (479)
Q Consensus 355 ~~~--~~~-a-----~---~~l~~g~~~VVVT~G~~Ga~~~~--~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~l~ 418 (479)
.+. .+. . . ++...+.+.||||+|++|++++. +++.+++|++++ +++|||||||+|+|||+++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~ 279 (328)
T cd01943 200 SEPSSDEEKEAVLQALLFSGILQDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLA 279 (328)
T ss_pred CCccchhhhhhhHHHHHHHhhhccCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHH
Confidence 211 111 1 1 12346889999999999999988 466888999988 899999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHhcccCC
Q 011689 419 RGVSDLKGMGALAARIAATVVGQQGT 444 (479)
Q Consensus 419 ~g~~~l~eAl~~A~a~Aa~~v~~~G~ 444 (479)
+|++ +++|+++|+++|++++++.|.
T Consensus 280 ~g~~-~~~al~~a~a~Aa~~v~~~G~ 304 (328)
T cd01943 280 LTKS-IDEACIYGSVAASFAIEQVGL 304 (328)
T ss_pred cCCC-HHHHHHHHHHHHHHHHccCCC
Confidence 9998 999999999999999999995
No 34
>PRK10294 6-phosphofructokinase 2; Provisional
Probab=100.00 E-value=9.4e-37 Score=307.01 Aligned_cols=292 Identities=18% Similarity=0.210 Sum_probs=230.3
Q ss_pred EEEE-cCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 125 VLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 125 Ilvi-G~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
|++| =++.+|.++.+++ + ++|+... .......+||+++|+|++|++||. +
T Consensus 4 i~~~~~~p~~d~~~~~~~-----~--~~~~~~~--------------~~~~~~~~GG~~~NvA~~l~~lG~--------~ 54 (309)
T PRK10294 4 IYTLTLAPSLDSATITPQ-----I--YPEGKLR--------------CSAPVFEPGGGGINVARAIAHLGG--------S 54 (309)
T ss_pred EEEEecChHHeEEEEeCc-----e--eeCCeEE--------------eccceecCCccHHHHHHHHHHcCC--------C
Confidence 4544 6999999999875 2 3443332 235677899999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh-----hhccCC
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV-----NLISKT 278 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~-----~~l~~a 278 (479)
+.+++.+|+ .+|+++++.|++.||++.+++..+..++.+++..+++|+++++.+++.. ++.+++.. ..++++
T Consensus 55 ~~~i~~vG~-~~g~~i~~~l~~~gv~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~ 131 (309)
T PRK10294 55 ATAIFPAGG-ATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIESG 131 (309)
T ss_pred eEEEEEecC-ccHHHHHHHHHHcCCCceEEECCCCCeeeEEEEEcCCCcEEEEECCCCC--CCHHHHHHHHHHHHhcCCC
Confidence 999999996 7999999999999999998876555555556667778888888776653 44332221 236789
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC--C
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK--E 356 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~--~ 356 (479)
++++++|+.+. ....+.+.++++.+++.|.++++|++.... ... ..++++|++++|++|+..|++.... +
T Consensus 132 ~~~~i~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-----~~~--~~~~~~~~i~~n~~E~~~l~g~~~~~~~ 203 (309)
T PRK10294 132 AILVISGSLPP-GVKLEKLTQLISAAQKQGIRCIIDSSGDAL-----SAA--LAIGNIELVKPNQKELSALVNRDLTQPD 203 (309)
T ss_pred CEEEEeCCCCC-CCCHHHHHHHHHHHHHcCCeEEEeCCCHHH-----HHH--HhcCCCeEECCCHHHHHHHhCCCCCCHH
Confidence 99999997642 123578889999999999999999874321 111 1236899999999999999986432 2
Q ss_pred cHHHH-HHHHhcC-CCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 357 SPEST-TRYLSHF-VPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 357 ~~~~a-~~~l~~g-~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
+.+.+ .+++..+ ++.||||+|++|++++.+++.+++++++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 204 ~~~~a~~~l~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~ag~l~~l~~g~~-~~~al~~a~a~ 282 (309)
T PRK10294 204 DVRKAAQELVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-LEEMVRFGVAA 282 (309)
T ss_pred HHHHHHHHHHHcCCCCEEEEecCCCceEEEcCCccEEEeCCCcccCCCcchHHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 23344 4455666 799999999999999988777888988999999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHH
Q 011689 435 AATVVGQQGTRLSVRHASELAESFA 459 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~ 459 (479)
|+++|++.|++. ...++++++++
T Consensus 283 aa~~v~~~G~~~--~~~~~~~~~~~ 305 (309)
T PRK10294 283 GSAATLNQGTRL--CSHDDTQKIYA 305 (309)
T ss_pred HHHHhcCCCCCC--CCHHHHHHHHH
Confidence 999999999984 47777777776
No 35
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=100.00 E-value=5.5e-37 Score=309.12 Aligned_cols=295 Identities=22% Similarity=0.238 Sum_probs=224.1
Q ss_pred CccEEEEcCceeeeeec--cChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGM--VDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~--v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+.+|+++|++++|++.. ++. +.+.. +.+.. ........+|| ++|+|.+|++||.
T Consensus 7 ~~~il~iG~~~iD~~~~~~~~~-~~~~~------------~~~~~-----~~~~~~~~~GG-a~NvA~~l~~lg~----- 62 (315)
T TIGR02198 7 GAKVLVVGDVMLDRYWYGKVSR-ISPEA------------PVPVV-----KVEREEDRLGG-AANVARNIASLGA----- 62 (315)
T ss_pred CCcEEEECceeEeeeeeecccc-cCCCC------------CCceE-----EEEEEEecCcH-HHHHHHHHHhcCC-----
Confidence 56799999999999986 222 00000 00110 11245678899 7999999999999
Q ss_pred CCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCC------hhhh
Q 011689 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD------PCLV 272 (479)
Q Consensus 200 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~------~~~~ 272 (479)
++.++|.||+|.+|+++++.|++.||++.++.. ++.+|+.++++++.++ +...........++.. +...
T Consensus 63 ---~v~~i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (315)
T TIGR02198 63 ---RVFLVGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLARNQ-QLLRVDFEERDPINAELEARLLAAIR 138 (315)
T ss_pred ---ceEEEEEEecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcCCe-EEEEecCCCCCCCCHHHHHHHHHHHH
Confidence 899999999999999999999999999988765 4568999988887532 2222222211123321 1123
Q ss_pred hhccCCcEEEEeccccC-CcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 273 NLISKTNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~-~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
..++++++++++++... ++ .+.+..+++.++++|.++++|+++.. + ..++++|++++|++|++.|++
T Consensus 139 ~~l~~~~~v~~~~~~~~~~~--~~~~~~~~~~a~~~g~~v~~D~~~~~-----~-----~~~~~~d~l~~n~~E~~~l~~ 206 (315)
T TIGR02198 139 EQLASADAVVLSDYAKGVLT--PRVVQEVIAAARKHGKPVLVDPKGKD-----F-----SRYRGATLITPNRKEAEAAVG 206 (315)
T ss_pred hhhhhCCEEEEecCCCCccC--HHHHHHHHHHHHhcCCCEEEeCCCcc-----h-----hhcCCCcEECCCHHHHHHHhC
Confidence 45789999999887432 22 56788899999999999999987431 1 135789999999999999988
Q ss_pred CCC-CCcHHH-HHHHHh-cCCCEEEEeecCCCeEEEEC-CeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHH
Q 011689 352 FSS-KESPES-TTRYLS-HFVPLVSVTDGARGSYIGVK-GEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGM 427 (479)
Q Consensus 352 ~~~-~~~~~~-a~~~l~-~g~~~VVVT~G~~Ga~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eA 427 (479)
... .++.+. +.+++. .|++.||||+|++|++++.+ ++.+++|+++++++|||||||+|+|||++++++|++ +++|
T Consensus 207 ~~~~~~~~~~~~~~l~~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~ag~~~~l~~g~~-~~~a 285 (315)
T TIGR02198 207 ACDTEAELVQAAEKLLEELDLEALLVTRSEKGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALAAGAS-LEEA 285 (315)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCEEEEEcCCCCeEEEecCCCeEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-HHHH
Confidence 321 122333 344443 58999999999999999884 678889999999999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011689 428 GALAARIAATVVGQQGTRLSVRHASELAESFA 459 (479)
Q Consensus 428 l~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~ 459 (479)
+++|+++|+++|++.|+.. ++.+++++.++
T Consensus 286 l~~A~~~aa~~~~~~G~~~--~~~~~~~~~~~ 315 (315)
T TIGR02198 286 CRLANAAAGVVVGKLGTAT--VSPAELANALQ 315 (315)
T ss_pred HHHHHHHhhhhhccCCCCC--CCHHHHHHHhC
Confidence 9999999999999999874 68889887653
No 36
>PRK09513 fruK 1-phosphofructokinase; Provisional
Probab=100.00 E-value=1.7e-36 Score=305.64 Aligned_cols=291 Identities=20% Similarity=0.218 Sum_probs=231.9
Q ss_pred EEEE-cCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 125 VLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 125 Ilvi-G~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
|+++ =++++|++..+++ +| .|... ......+++||++.|+|++|++||. +
T Consensus 5 ~~~~~~~p~~D~~~~~~~-----~~--~~~~~--------------~~~~~~~~~GG~~~Nva~~la~lG~--------~ 55 (312)
T PRK09513 5 VATITLNPAYDLVGFCPE-----IE--RGEVN--------------LVKTTGLHAAGKGINVAKVLKDLGI--------D 55 (312)
T ss_pred EEEEecChHHeEEEEcCc-----ee--cCCee--------------eecceeecCCchHHHHHHHHHHcCC--------C
Confidence 6644 5999999999876 22 23211 1236789999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChh------hhhhccC
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPC------LVNLISK 277 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~------~~~~l~~ 277 (479)
+.++|.||+|.+|++ ++.|+++||++.+++. +++|+.++.+++.+|+++.+.+.+. .++..+. ....+++
T Consensus 56 ~~~i~~vG~D~~~~~-~~~l~~~gv~~~~~~~-~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 131 (312)
T PRK09513 56 VTVGGFLGKDNQDGF-QQLFSELGIANRFQVV-QGRTRINVKLTEKDGEVTDFNFSGF--EVTPADWERFVTDSLSWLGQ 131 (312)
T ss_pred eEEEEEecCccHHHH-HHHHHHcCCCccEEEC-CCCCEEEEEEEeCCCcEEEEeCCCC--CCCHHHHHHHHHHHHhhcCC
Confidence 999999999999986 6899999999877644 4578888888888899987777664 2332221 1345789
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC-
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE- 356 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~- 356 (479)
++++|++|+.+. ....+.+.++++.++++|.++++|++... +++.+...++++++|++|+..+++....+
T Consensus 132 ~d~v~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~~~~~~~~l~~n~~E~~~l~g~~~~~~ 202 (312)
T PRK09513 132 FDMVAVSGSLPR-GVSPEAFTDWMTRLRSQCPCIIFDSSREA--------LVAGLKAAPWLVKPNRRELEIWAGRKLPEL 202 (312)
T ss_pred CCEEEEECCCCC-CCCHHHHHHHHHHHHhcCCEEEEECChHH--------HHHHhccCCeEEcCCHHHHHHHhCCCCCCH
Confidence 999999998643 22357788889999999999999987421 22334467899999999999999864321
Q ss_pred -cHHHH-HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 357 -SPEST-TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 357 -~~~~a-~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
+...+ ..+.+.+++.||||+|++|++++.+++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++
T Consensus 203 ~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~-~~~a~~~A~a~ 281 (312)
T PRK09513 203 KDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRES-SEHTLRLATAV 281 (312)
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCCCCcEEEeCCceEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 22233 3455678999999999999999888777788888899999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|++++++.| .++|+.+|+++++.+
T Consensus 282 Aa~~~~~~~--~~~~~~~e~~~~l~~ 305 (312)
T PRK09513 282 SALAVSQSN--VGITDRPQLAAMMAR 305 (312)
T ss_pred HHHHhhCCC--CCCCCHHHHHHHHhc
Confidence 999999997 468899999998743
No 37
>PRK09813 fructoselysine 6-kinase; Provisional
Probab=100.00 E-value=3.7e-37 Score=302.37 Aligned_cols=257 Identities=25% Similarity=0.279 Sum_probs=212.0
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
++|++||++++|++.... +.++||++.|+|++|++||.
T Consensus 1 ~~v~~iG~~~~D~~~~~~----------------------------------~~~~GG~~~NvA~~l~~lG~-------- 38 (260)
T PRK09813 1 KKLATIGDNCVDIYPQLG----------------------------------KAFSGGNAVNVAVYCTRYGI-------- 38 (260)
T ss_pred CeEEEeccceeeecccCC----------------------------------ccccCccHHHHHHHHHHcCC--------
Confidence 479999999999987521 15799999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEec-CCCCCCCCChhhhhhccCCcEE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ-GTSSTINYDPCLVNLISKTNIF 281 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~-ga~~~l~~~~~~~~~l~~ad~v 281 (479)
++.++|.||+|.+|+++++.|++.||+++++.+.+.+|+.+++.++ +++|++..+. +....+...+...+.+.+++++
T Consensus 39 ~~~~is~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 117 (260)
T PRK09813 39 QPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELH-DNDRVFGDYTEGVMADFALSEEDYAWLAQYDIV 117 (260)
T ss_pred cceEEEEecCcHHHHHHHHHHHHcCCcchheeeecCCCceEEEEEe-CCcEEeeccCCCcccccccCHHHHHHHHhCCEE
Confidence 8999999999999999999999999999988776678888888775 6889887664 5555555555555667899999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHH-
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPES- 360 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~- 360 (479)
|++.+. ....+++.++++++++++|++... ....++.+++++|+++.|+++.. .+.+.
T Consensus 118 ~~~~~~--------~~~~~~~~~~~~~~~v~~D~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~--------~~~~~~ 176 (260)
T PRK09813 118 HAAIWG--------HAEDAFPQLHAAGKLTAFDFSDKW-----DSPLWQTLVPHLDYAFASAPQED--------EFLRLK 176 (260)
T ss_pred EEeccc--------hHHHHHHHHHHcCCeEEEEcCCCc-----cHHHHHHhCCceeEEEecCCcch--------HHHHHH
Confidence 997421 124567778889999999997432 12345667899999998865311 12333
Q ss_pred HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhc
Q 011689 361 TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVG 440 (479)
Q Consensus 361 a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~ 440 (479)
+.++++.+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+.+++
T Consensus 177 ~~~~~~~g~~~viit~G~~Ga~~~~~~~~~~~~~~~~~~vDttGAGDaF~ag~i~~~~~g~~-~~~al~~a~~~aa~~~~ 255 (260)
T PRK09813 177 MKAIVARGAGVVIVTLGENGSIAWDGAQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMT-LPQAMAQGTACAAKTIQ 255 (260)
T ss_pred HHHHHHcCCCEEEEEECCCceEEEECCEEEecCCcccCCCCCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHh
Confidence 44456788999999999999999998888999999999999999999999999999999998 99999999999999999
Q ss_pred ccCC
Q 011689 441 QQGT 444 (479)
Q Consensus 441 ~~G~ 444 (479)
+.|+
T Consensus 256 ~~G~ 259 (260)
T PRK09813 256 YHGA 259 (260)
T ss_pred ccCC
Confidence 9986
No 38
>TIGR01231 lacC tagatose-6-phosphate kinase. This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation.
Probab=100.00 E-value=2.6e-36 Score=303.83 Aligned_cols=293 Identities=19% Similarity=0.180 Sum_probs=228.3
Q ss_pred EEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccEE
Q 011689 126 LGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVA 205 (479)
Q Consensus 126 lviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~ 205 (479)
.|.=++.+|+++.+++ ++.++... ..++...+||+++|+|++|++||. ++.
T Consensus 3 ~~~~~p~~d~~~~~~~-------~~~~~~~~--------------~~~~~~~~GG~~~NvA~~la~LG~--------~v~ 53 (309)
T TIGR01231 3 TVTLNPSVDISYPLTA-------LKLDTVNR--------------VQEVSKTAGGKGLNVTRVLAQVGD--------PVL 53 (309)
T ss_pred EEEcchHHeEEEEcCC-------eeeCceEe--------------eceeeecCCccHHHHHHHHHHcCC--------CeE
Confidence 3445889999888765 12332221 236788999999999999999999 899
Q ss_pred EEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCC----hhhhhhccCCcEE
Q 011689 206 MTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD----PCLVNLISKTNIF 281 (479)
Q Consensus 206 ~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~----~~~~~~l~~ad~v 281 (479)
++|.+|+| +|+++++.|++.||++.++... ..|+.++.++. +|+|+++.++++....... +.....+++++++
T Consensus 54 ~i~~vG~~-~G~~i~~~l~~~GV~~~~~~~~-~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 130 (309)
T TIGR01231 54 ASGFLGGK-LGEFIEKELDHSDIKHAFYKIS-GETRNCIAILH-EGQQTEILEQGPEISNQEAAGFLKHFEQLLEKVEVV 130 (309)
T ss_pred EEEEecCh-hHHHHHHHHHHcCCceeEEECC-CCCEEeEEEEe-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHhccCCEE
Confidence 99999974 9999999999999999887753 46777777765 6899988887764221111 1223457899999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHH-
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPES- 360 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~- 360 (479)
|++|+.+... ....+.++++.++++|.++++|++.... ... ...+.++|++++|.+|++.+++.....+.+.
T Consensus 131 ~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~~-----~~~-~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~ 203 (309)
T TIGR01231 131 AISGSLPKGL-PQDYYAQIIERCQNKGVPVVLDCSGATL-----QTV-LENPAKPTVIKPNIEELSQLLNQELTEDLESL 203 (309)
T ss_pred EEECCCCCCc-CHHHHHHHHHHHHhCCCeEEEECChHHH-----HHH-HhccCCCeEEcCCHHHHHHHhCCCCCCCHHHH
Confidence 9999854321 2567889999999999999999875321 111 2234689999999999999998643223332
Q ss_pred ---HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 011689 361 ---TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAAT 437 (479)
Q Consensus 361 ---a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~ 437 (479)
+.+++..+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++
T Consensus 204 ~~~~~~~~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~agfl~~l~~g~~-~~~a~~~a~a~aa~ 282 (309)
T TIGR01231 204 KQALSQPLFSGIEWIIVSLGAQGAFAKHGHTFYKVNIPTISVVNPVGSGDSTVAGITSALLNHES-DHDLLKKANTLGML 282 (309)
T ss_pred HHHHHHHHHcCCCEEEEccCCCceEEEeCCeeEEeeCCccCcCCCcchHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHH
Confidence 23344578999999999999999988888889999999999999999999999999999998 99999999999999
Q ss_pred HhcccCCCCCCCCHHHHHHHHHc
Q 011689 438 VVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 438 ~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
++++.++. ..+.+++++++++
T Consensus 283 ~~~~~~~~--~~~~~~~~~~~~~ 303 (309)
T TIGR01231 283 NAQEAQTG--HVNLNNYDDLFNQ 303 (309)
T ss_pred HhcCcccC--CCCHHHHHHHHhc
Confidence 99988766 3477777777664
No 39
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.
Probab=100.00 E-value=2.7e-36 Score=302.59 Aligned_cols=287 Identities=23% Similarity=0.263 Sum_probs=228.4
Q ss_pred cCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEE
Q 011689 129 GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTG 208 (479)
Q Consensus 129 G~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig 208 (479)
=++.+|++..+++ + ..|.. .........+||++.|+|+++++||. ++.++|
T Consensus 6 ~~~~~D~~~~~~~-~------~~~~~--------------~~~~~~~~~~GG~~~N~a~~l~~lg~--------~~~~i~ 56 (303)
T TIGR03168 6 LNPAIDLTIEVDG-L------TPGEV--------------NRVAAVRKDAGGKGINVARVLARLGA--------EVVATG 56 (303)
T ss_pred cchHHeEEEEcCc-c------ccCce--------------eecCcccccCCcchhhHHHHHHHcCC--------CeEEEE
Confidence 3677899988775 1 12211 12235678999999999999999999 899999
Q ss_pred EeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh------hhhccCCcEEE
Q 011689 209 SVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL------VNLISKTNIFI 282 (479)
Q Consensus 209 ~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~------~~~l~~ad~v~ 282 (479)
.||+| +|+.+++.|++.||++.++... ..|++++++.+.+|+++.+.+.+. .++..++. .+.+++++++|
T Consensus 57 ~vG~D-~g~~i~~~l~~~gI~~~~i~~~-~~t~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~ 132 (303)
T TIGR03168 57 FLGGF-TGEFIEALLAEEGIKNDFVEVK-GETRINVKIKESSGEETELNEPGP--EISEEELEQLLEKLRELLASGDIVV 132 (303)
T ss_pred EeCCc-hhHHHHHHHHHcCCCceEEECC-CCCEEeEEEEeCCCCEEEEeCcCC--CCCHHHHHHHHHHHHHhccCCCEEE
Confidence 99998 7999999999999999988764 467778887777888877766554 34443321 13478999999
Q ss_pred EeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC--cHHH
Q 011689 283 VEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE--SPES 360 (479)
Q Consensus 283 i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~--~~~~ 360 (479)
++++.... ...+.+..+++.++++|.++++|++... +++.+..++|++++|++|+..+++....+ +.++
T Consensus 133 i~~~~~~~-~~~~~~~~~~~~~~~~g~~v~~D~~~~~--------~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~ 203 (303)
T TIGR03168 133 ISGSLPPG-VPPDFYAQLIAIARKRGAKVILDTSGEA--------LREALAAKPFLIKPNHEELEELFGRELKTEEEIIE 203 (303)
T ss_pred EeCCCCCC-CCHHHHHHHHHHHHHCCCEEEEECCcHH--------HHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHH
Confidence 99874321 1256778889999999999999987531 12233358999999999999999864321 2333
Q ss_pred H-HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Q 011689 361 T-TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVV 439 (479)
Q Consensus 361 a-~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v 439 (479)
+ ..++..+++.+|||+|.+|++++.+++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+.+|
T Consensus 204 ~~~~l~~~g~~~vviT~g~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~F~a~~~~~l~~g~~-i~~a~~~A~~~aa~~~ 282 (303)
T TIGR03168 204 AARELLDRGAENVLVSLGADGALLVTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLS-LEEALRFAVAAGSAAA 282 (303)
T ss_pred HHHHHHHcCCCEEEEeecCCCcEEEeCCceEEeeCCcceeecCcCHHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHh
Confidence 3 3455678899999999999999998888899999999999999999999999999999998 9999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHHc
Q 011689 440 GQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 440 ~~~G~~~~~p~~~el~~~l~~ 460 (479)
++.|+. .|+.+++++++.+
T Consensus 283 ~~~G~~--~~~~~~~~~~~~~ 301 (303)
T TIGR03168 283 FSPGTG--LPDPEDVEELLDQ 301 (303)
T ss_pred cCCCcC--CCCHHHHHHHHhh
Confidence 999985 5899999887654
No 40
>cd01941 YeiC_kinase_like YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=2.1e-36 Score=300.55 Aligned_cols=276 Identities=22% Similarity=0.283 Sum_probs=217.7
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
|+++|++++|++..++. .|. ++ +.. .......+||+++|+|++|++||. ++
T Consensus 2 v~~~G~~~~D~~~~~~~-----~~~-~~-----------~~~----~~~~~~~~GG~~~Nva~~l~~lG~--------~~ 52 (288)
T cd01941 2 IVVIGAANIDLRGKVSG-----SLV-PG-----------TSN----PGHVKQSPGGVGRNIAENLARLGV--------SV 52 (288)
T ss_pred eEEEEeEEEeeeecccC-----ccc-cC-----------CCC----CeeEEEccCcHHHHHHHHHHHhCC--------Cc
Confidence 89999999999988765 111 11 110 114568899999999999999999 89
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEE-ecCCCCCCCCC--hhhhhhccCCcEE
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLA-YQGTSSTINYD--PCLVNLISKTNIF 281 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~-~~ga~~~l~~~--~~~~~~l~~ad~v 281 (479)
.++|.||+|.+|+.+++.|++.||++..+...+.+|+.++++++.+|+|++.. .++....++.. +.....+.+++++
T Consensus 53 ~~~~~lG~D~~g~~i~~~L~~~gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 132 (288)
T cd01941 53 ALLSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLRKIREALKEAKPI 132 (288)
T ss_pred EEEEEEecCccHHHHHHHHHHcCCccceeeeCCCCcceEEEEECCCCCEEEEEechHhhhhCCHHHHHHHHHHHhcCCEE
Confidence 99999999999999999999999999988766678999999998889988632 33333333322 2234567899999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCc--HH
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKES--PE 359 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~--~~ 359 (479)
++++.. + ...+..+++.+++.+.++++|+..... +.+.+ .+++++|++++|++|+..+++....+. ..
T Consensus 133 ~~~~~~---~--~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~-~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~ 202 (288)
T cd01941 133 VVDANL---P--EEALEYLLALAAKHGVPVAFEPTSAPK----LKKLF-YLLHAIDLLTPNRAELEALAGALIENNEDEN 202 (288)
T ss_pred EEeCCC---C--HHHHHHHHHhhhhcCCcEEEEccchHH----hccch-hhcccceEEeCCHHHHHHHhCcccCCchhHH
Confidence 997532 2 456778888899999999999864321 11111 467899999999999999988653221 22
Q ss_pred H-HHHHHhcCCCEEEEeecCCCeEEEEC---CeEEEeCC-CCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 360 S-TTRYLSHFVPLVSVTDGARGSYIGVK---GEAVYIPP-SPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 360 ~-a~~~l~~g~~~VVVT~G~~Ga~~~~~---~~~~~vpa-~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
. +..++..+++.||||+|++|++++.+ +..+++|+ ++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 203 ~~~~~~~~~~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~~~~~~vDttGAGDaf~a~~~~~l~~g~~-~~~al~~a~~~ 281 (288)
T cd01941 203 KAAKILLLPGIKNVIVTLGAKGVLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMS-LDDSLRFAQAA 281 (288)
T ss_pred HHHHHHHHcCCcEEEEEeCCCcEEEEecCCCceeEEecCCCCccceeCCCcHHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 2 34455678999999999999999886 56788898 5889999999999999999999999998 99999999999
Q ss_pred HHHHhc
Q 011689 435 AATVVG 440 (479)
Q Consensus 435 Aa~~v~ 440 (479)
|+.+|+
T Consensus 282 Aa~~~~ 287 (288)
T cd01941 282 AALTLE 287 (288)
T ss_pred HHHHhc
Confidence 999986
No 41
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.
Probab=100.00 E-value=1.5e-35 Score=295.24 Aligned_cols=277 Identities=21% Similarity=0.237 Sum_probs=220.7
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
..++|++++|+++.+++ + +.+.. .........+||+++|+|.+|++||. ++
T Consensus 3 ~~~~~~~~~D~~~~~~~-----~--~~~~~--------------~~~~~~~~~~GG~~~Nva~~la~lG~--------~v 53 (289)
T cd01164 3 YTVTLNPAIDLTIELDQ-----L--QPGEV--------------NRVSSTRKDAGGKGINVARVLKDLGV--------EV 53 (289)
T ss_pred EEEecChHHeEEEEcCc-----c--cCCce--------------eecccccccCCcchhHHHHHHHHcCC--------Ce
Confidence 46789999999999986 2 12211 12236778999999999999999999 89
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh------hhhccCC
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL------VNLISKT 278 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~------~~~l~~a 278 (479)
.++|.||+| +|+.+++.|++.||++.++... ..|++++++.+.+|+++.+.+.+.. ++.++.. .+.++++
T Consensus 54 ~~is~vG~D-~g~~i~~~l~~~gi~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 129 (289)
T cd01164 54 TALGFLGGF-TGDFFEALLKEEGIPDDFVEVA-GETRINVKIKEEDGTETEINEPGPE--ISEEELEALLEKLKALLKKG 129 (289)
T ss_pred EEEEEccCc-hhHHHHHHHHHcCCCceEEECC-CCCEEEEEEEeCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHhcCCC
Confidence 999999998 8999999999999999987654 4578888888766777777655542 4433221 1346789
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC--C
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK--E 356 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~--~ 356 (479)
+++|++++.+.. .....+..+++.+++.+.++++|++... ..+.+.+++|++++|++|++.+++.... +
T Consensus 130 ~~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~i~~D~~~~~--------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~ 200 (289)
T cd01164 130 DIVVLSGSLPPG-VPADFYAELVRLAREKGARVILDTSGEA--------LLAALAAKPFLIKPNREELEELFGRPLGDEE 200 (289)
T ss_pred CEEEEeCCCCCC-cCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHhcCCcEECCCHHHHHHHhCCCCCCHH
Confidence 999999875421 1246778888889999999999986421 1122227999999999999999985422 2
Q ss_pred cHHHH-HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 011689 357 SPEST-TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIA 435 (479)
Q Consensus 357 ~~~~a-~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~A 435 (479)
+..++ ..+.+.+++.||||+|++|++++.+++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++|
T Consensus 201 ~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-~~~a~~~A~~~A 279 (289)
T cd01164 201 DVIAAARKLIERGAENVLVSLGADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLS-LEEALRLAVAAG 279 (289)
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCEEEcCCcEEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHHHH
Confidence 23333 4466778999999999999999988888889999999999999999999999999999998 999999999999
Q ss_pred HHHhcccCC
Q 011689 436 ATVVGQQGT 444 (479)
Q Consensus 436 a~~v~~~G~ 444 (479)
+.+|++.|+
T Consensus 280 a~~~~~~G~ 288 (289)
T cd01164 280 SATAFSPGT 288 (289)
T ss_pred HHHhcCccC
Confidence 999999985
No 42
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=100.00 E-value=1.8e-35 Score=314.73 Aligned_cols=299 Identities=20% Similarity=0.219 Sum_probs=227.3
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
.+.+|+|+|++++|++..++.. +++ .+.+.+. +........+|| ++|+|++|++||.
T Consensus 9 ~~~~ilviG~~~lD~~~~~~~~---~~~----------~~~~~~~---~~~~~~~~~~GG-a~NvA~~la~LG~------ 65 (473)
T PRK11316 9 ERAGVLVVGDVMLDRYWYGPTS---RIS----------PEAPVPV---VKVNQIEERPGG-AANVAMNIASLGA------ 65 (473)
T ss_pred CCCcEEEECccEEeeeeecccc---eeC----------CCCCCCE---EEeeeEEecCcH-HHHHHHHHHHcCC------
Confidence 4457999999999999875320 010 0011111 112367788999 5999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChh---hhhhccC
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPC---LVNLISK 277 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~---~~~~l~~ 277 (479)
++.++|.||+|.+|+++++.|++.||+++.+...+.+|+.++++++.+++............+..+++ ....+++
T Consensus 66 --~v~~i~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 143 (473)
T PRK11316 66 --QARLVGLTGIDEAARALSKLLAAVGVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLLERIEQALPS 143 (473)
T ss_pred --cEEEEEEEcCCHHHHHHHHHHHHcCCceeEEEcCCCCCCeeEEEEeCCceEEecccccCCCchhHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999887766689998888875443222211111112222221 2355789
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC-C
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK-E 356 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~-~ 356 (479)
++++|++++... ..+.+..+++.++++|.++++|+....+ ..++.+|++++|.+|++.+++.... +
T Consensus 144 ~~~v~is~~~~~---~~~~~~~~~~~~k~~g~~vv~Dp~~~~~----------~~~~~~dil~pN~~Ea~~l~g~~~~~~ 210 (473)
T PRK11316 144 IGALVLSDYAKG---ALASVQAMIQLARKAGVPVLIDPKGTDF----------ERYRGATLLTPNLSEFEAVVGKCKDEA 210 (473)
T ss_pred CCEEEEecCCcc---chhHHHHHHHHHHhcCCeEEEeCCCCCc----------cccCCCeEECcCHHHHHHHhCCCCCHH
Confidence 999999876432 1356778888999999999999964311 1246899999999999999985211 1
Q ss_pred cH-HHHHHHH-hcCCCEEEEeecCCCeEEEECCe-EEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 011689 357 SP-ESTTRYL-SHFVPLVSVTDGARGSYIGVKGE-AVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAAR 433 (479)
Q Consensus 357 ~~-~~a~~~l-~~g~~~VVVT~G~~Ga~~~~~~~-~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a 433 (479)
.. +.+.+++ ..+++.|+||+|.+|+++++++. .+++|+++++++||+||||+|+|||+++|++|++ +++|+++|++
T Consensus 211 ~~~~~~~~l~~~~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~aa~~~~l~~g~~-~~~al~~A~a 289 (473)
T PRK11316 211 ELVEKGMKLIADYDLSALLVTRSEQGMTLLQPGKAPLHLPTQAREVYDVTGAGDTVISVLAAALAAGNS-LEEACALANA 289 (473)
T ss_pred HHHHHHHHHHHhcCCCEEEEEecCCCcEEEecCCceEEecCcCCCCCCCCCCcHHHHHHHHHHHHcCCC-HHHHHHHHHH
Confidence 11 2345555 46889999999999998887665 5789999999999999999999999999999998 9999999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 434 IAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 434 ~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+|++++++.|+.. ++.++++++++.
T Consensus 290 ~Aa~~v~~~G~~~--~~~~~l~~~l~~ 314 (473)
T PRK11316 290 AAGVVVGKLGTST--VSPIELENALRG 314 (473)
T ss_pred HHHhhcccCCCcc--CCHHHHHHHHhc
Confidence 9999999999874 688999998885
No 43
>PLN02630 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=6.6e-34 Score=288.55 Aligned_cols=270 Identities=20% Similarity=0.168 Sum_probs=216.2
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
.++|+|||++++|++..+.. .....+||+++|+|.+|++||.
T Consensus 11 ~~~vlvvG~~~~D~i~~~g~-------------------------------~~~~~~GG~a~N~A~alarLG~------- 52 (335)
T PLN02630 11 QRRVLIVGNYCHDVLIQNGS-------------------------------VTAESLGGAASFISNVLDALSV------- 52 (335)
T ss_pred CCCEEEEeeeeeeEEEeCCc-------------------------------EEEEecCcHHHHHHHHHHHcCC-------
Confidence 45699999999999986321 1356899999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECC-----CCCeEEEEecCCCCCCCCChhhhhhcc
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTP-----DAQRAMLAYQGTSSTINYDPCLVNLIS 276 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~-----~G~rt~~~~~ga~~~l~~~~~~~~~l~ 276 (479)
++.++|+||+|.. .+|+...+..++.+|+.+++++++ +|+++++.+.+++..+++.++....+.
T Consensus 53 -~~~lis~VG~D~~----------~~v~~~~~~~~~~~T~~~~~~~~~g~~~~~~e~~i~~~~ga~~~l~~~di~~~~~~ 121 (335)
T PLN02630 53 -ECELVSKVGPDFL----------YQVSHPPIVIPDSKTTEFHADFDQGIDGNGHEDRVLKRVCACDPIEPSDIPDMRYE 121 (335)
T ss_pred -ceEEEEEecCCcc----------ccccccceecCCCCceEEEEEEcCCcccCCCCeEEEEeccccCCCChHHCCHHHhc
Confidence 8999999999952 377765554556689999988876 568899999999999988877654577
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHh-----cCCEEEEeCCChhhh-hhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHR-----SGALVAVTASDVTCI-ERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~-----~g~~v~~D~~~~~~~-~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.++++++.+. .+ .+....+++.++. +|..+++|+.+.... .+.....+..+++++|++++|++|+..+
T Consensus 122 ~~~~~~l~~e---i~--~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~~~~~~~~L~~iDil~~ne~Ea~~l- 195 (335)
T PLN02630 122 FGMAVGVAGE---IL--PETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEETGFYDMLPRIGFLKASSEEALFI- 195 (335)
T ss_pred ccceeeecCC---Cc--HHHHHHHHHHhhhheeccCceEEecCCcccccccchhhHHHHHHHHHhCCEEEecHHHHhhc-
Confidence 7888888654 22 4678888888887 789999998753100 0111123456789999999999999876
Q ss_pred CCCCCCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 351 HFSSKESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 351 g~~~~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
+.+.+. + ...||||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++
T Consensus 196 ------~~~~~~---~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vDttGAGDaF~agfi~~l~~g~~-~~~a~~~ 263 (335)
T PLN02630 196 ------DVEEVR---Q--KCCVIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-VPDAALL 263 (335)
T ss_pred ------CHHHHc---c--CCEEEEEECCCceEEEECCeeEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCC-HHHHHHH
Confidence 122222 1 248999999999999998888899999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 431 AARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 431 A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+++|++++++.|.. ..+.+++++.+++
T Consensus 264 A~a~aa~~v~~~G~~--~~~~~~l~~~~~~ 291 (335)
T PLN02630 264 GNYFGSLAVEQVGIP--KFDLRQLQRVKDE 291 (335)
T ss_pred HHHHHHHHhCcCCCC--CCCHHHHHHHhhc
Confidence 999999999999953 4578888888664
No 44
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=277.24 Aligned_cols=287 Identities=22% Similarity=0.286 Sum_probs=237.8
Q ss_pred cCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEE
Q 011689 129 GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTG 208 (479)
Q Consensus 129 G~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig 208 (479)
=++.+|+++.++. ++.|... +.......+||+|.|||+.|+.||. ++..+|
T Consensus 7 LNPaiD~~~~l~~-------l~~g~vN--------------r~~~~~~~aGGKGINVa~vL~~lG~--------~~~a~G 57 (310)
T COG1105 7 LNPALDYTVFLDE-------LELGEVN--------------RVRAVTKTAGGKGINVARVLKDLGI--------PVTALG 57 (310)
T ss_pred cChhHhheeeccc-------cccccee--------------eeccceecCCCCceeHHHHHHHcCC--------CceEEE
Confidence 5899999998864 2233222 2236788999999999999999999 799999
Q ss_pred EeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECC-CCCeEEEEecCCCCCCCCChh------hhhhccCCcEE
Q 011689 209 SVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTP-DAQRAMLAYQGTSSTINYDPC------LVNLISKTNIF 281 (479)
Q Consensus 209 ~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~-~G~rt~~~~~ga~~~l~~~~~------~~~~l~~ad~v 281 (479)
.+|.+ .|+++.+.|++.||...++++ ++.|+.++.+.+. +|+.|.+..+|+. ++.++. ....+.+.|+|
T Consensus 58 flGg~-tg~~~~~~l~~~gi~~~fv~v-~g~TRinvki~~~~~~~~Tein~~Gp~--is~~~~~~~l~~~~~~l~~~d~V 133 (310)
T COG1105 58 FLGGF-TGEFFVALLKDEGIPDAFVEV-KGDTRINVKILDEEDGEETEINFPGPE--ISEAELEQFLEQLKALLESDDIV 133 (310)
T ss_pred ecCCc-cHHHHHHHHHhcCCCceEEEc-cCCCeeeEEEEecCCCcEEEecCCCCC--CCHHHHHHHHHHHHHhcccCCEE
Confidence 99997 899999999999999998875 4579999988876 5668888888874 444322 33447789999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC---cH
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE---SP 358 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~---~~ 358 (479)
+++|+.+..- ..+.+.++++.++++|.++++|.++..+ .+.+-....+|+||.+|++.++|.+..+ ..
T Consensus 134 vlsGSlP~g~-~~d~y~~li~~~~~~g~~vilD~Sg~~L--------~~~L~~~P~lIKPN~~EL~~~~g~~~~~~~d~i 204 (310)
T COG1105 134 VLSGSLPPGV-PPDAYAELIRILRQQGAKVILDTSGEAL--------LAALEAKPWLIKPNREELEALFGRELTTLEDVI 204 (310)
T ss_pred EEeCCCCCCC-CHHHHHHHHHHHHhcCCeEEEECChHHH--------HHHHccCCcEEecCHHHHHHHhCCCCCChHHHH
Confidence 9999876432 2789999999999999999999886432 2233356999999999999999986432 23
Q ss_pred HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 011689 359 ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATV 438 (479)
Q Consensus 359 ~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~ 438 (479)
+.+++++..|++.|||++|++|+++++++..+++.++++++++|+||||++.|||+++++++++ +++++++|.++|+.+
T Consensus 205 ~~a~~l~~~g~~~ViVSlG~~Gal~~~~~~~~~a~~p~~~vvstVGAGDs~VAGf~~~~~~~~~-~e~~l~~avA~g~a~ 283 (310)
T COG1105 205 KAARELLAEGIENVIVSLGADGALLVTAEGVYFASPPKVQVVSTVGAGDSMVAGFLAGLLKGKS-LEEALRFAVACGAAA 283 (310)
T ss_pred HHHHHHHHCCCCEEEEEecCcccEEEccCCeEEEeCCCcceecCcCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHH
Confidence 4466678899999999999999999999999999988999999999999999999999999998 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHHc
Q 011689 439 VGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 439 v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+++.+.. .++.+++++++.+
T Consensus 284 ~~~~~~~--~~~~~~~~~~~~~ 303 (310)
T COG1105 284 ASQKGTG--IPDLDQLKKIYAQ 303 (310)
T ss_pred hhcCCCC--CCCHHHHHHHhhh
Confidence 9999865 6788888887764
No 45
>cd01937 ribokinase_group_D Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=8.8e-34 Score=277.13 Aligned_cols=252 Identities=21% Similarity=0.192 Sum_probs=196.5
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+++|++++|++...+ .....+||+++|+|++|++||. +
T Consensus 1 ~il~iG~~~iD~~~~~~--------------------------------~~~~~~GG~~~Nva~~la~lG~--------~ 40 (254)
T cd01937 1 KIVIIGHVTIDEIVTNG--------------------------------SGVVKPGGPATYASLTLSRLGL--------T 40 (254)
T ss_pred CeEEEcceeEEEEecCC--------------------------------ceEEecCchhhhHHHHHHHhCC--------C
Confidence 58999999999997531 2457899999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIV 283 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i 283 (479)
+.++|.||+|.+|+ ++.|++.||++..+ ....|+.+++.++.+|+|+++.+.+++...... ...+.+++++|+
T Consensus 41 ~~~i~~vG~D~~g~--~~~l~~~gv~~~~~--~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 113 (254)
T cd01937 41 VKLVTKVGRDYPDK--WSDLFDNGIEVISL--LSTETTTFELNYTNEGRTRTLLAKCAAIPDTES---PLSTITAEIVIL 113 (254)
T ss_pred eEEEEeeCCCchHH--HHHHHHCCcEEEEe--cCCCeEEEEEEecCCCCeeeeeccccCCccccc---ccccCcccEEEE
Confidence 99999999999998 68899999997533 334666666667777888888777765433221 234678999999
Q ss_pred eccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhh-hhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHH-H
Q 011689 284 EGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIE-RHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPES-T 361 (479)
Q Consensus 284 ~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~-~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~-a 361 (479)
+++. .+....+.+.+ .+|++|++.. ++. ......++.+++++|++++|++|+..+ .+.+. +
T Consensus 114 ~~~~------~~~~~~~~~~~----~~v~~D~~~~-~~~~~~~~~~~~~~l~~~di~~~n~~E~~~~------~~~~~~~ 176 (254)
T cd01937 114 GPVP------EEISPSLFRKF----AFISLDAQGF-LRRANQEKLIKCVILKLHDVLKLSRVEAEVI------STPTELA 176 (254)
T ss_pred CCCc------chhcHHHHhhh----hheeEccccc-eeeccccchHHHhhcccCcEEEEcHHHHhhc------CCHHHHH
Confidence 7642 22233333322 6899998742 111 111223467889999999999999973 13444 4
Q ss_pred HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhc
Q 011689 362 TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVG 440 (479)
Q Consensus 362 ~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~ 440 (479)
.++...+++.||||+|.+|++++++++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++|+.+|+
T Consensus 177 ~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-~~~a~~~a~~~aa~~i~ 254 (254)
T cd01937 177 RLIKETGVKEIIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLAAFLYSRLSGKD-IKEAAEFAAAAAAKFIE 254 (254)
T ss_pred HHHHHcCCCEEEEeeCCcceEEEECCccEEccccCceeccCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHhC
Confidence 4555678999999999999999998888889999999999999999999999999999998 99999999999999874
No 46
>cd01946 ribokinase_group_C Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=3.1e-33 Score=276.96 Aligned_cols=266 Identities=17% Similarity=0.139 Sum_probs=198.9
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
|+|+|++++|++..... .+...+||++.|+|.+|++|| ++
T Consensus 2 v~~~G~~~~D~~~~~~~-------------------------------~~~~~~GG~a~N~a~~la~lg---------~v 41 (277)
T cd01946 2 LLVVGSVAFDAIETPFG-------------------------------KVDKALGGSATYFSLSASYFT---------DV 41 (277)
T ss_pred eEEEEEeeeeeecCCCc-------------------------------eeeeccCchHHHHHHHHHHhc---------cc
Confidence 89999999999943110 234679999999999999996 49
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEEEE--CCCCCeEEEEecCCCCCCCCChhhhhhccCCcEE
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLT--TPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIF 281 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~~--~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v 281 (479)
.++|.||+| +|+.++++|++.||+++++.+.+ .+|....... +.+++++.....+....+.+ .....+.+++++
T Consensus 42 ~~i~~vG~D-~g~~~~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v 118 (277)
T cd01946 42 RLVGVVGED-FPEEDYKLLNSHNIVTLGLLSKEDGKTFHWAGRYHYDLNEADTLDTDLNVFADFDP--QLPEHYKDSEFV 118 (277)
T ss_pred eeEEeccCc-ChHHHHHHHHhccCcceeEEEecCCCeEEEeeEehhhcccccchhhhhhHHhhcCC--CChHHhhcCCEE
Confidence 999999999 89999999999999999887643 4452211110 11223333222222122222 123457889999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHH-
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPES- 360 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~- 360 (479)
|+++.. .+...++++.+++. .++++|+... +. ....+.++.+++++|++++|++|++.+++. ++.++
T Consensus 119 ~~~~~~------~~~~~~~~~~~~~~-~~v~~D~~~~-~~-~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~---~~~~~~ 186 (277)
T cd01946 119 FLGNIA------PELQREVLEQVKDP-KLVVMDTMNF-WI-SIKPEKLKKVLAKVDVVIINDGEARQLTGA---ANLVKA 186 (277)
T ss_pred EECCCC------HHHHHHHHHHHHhC-CEEEEccHHH-hh-hhhHHHHHHHhccCCEEeCCHHHHHHHhCC---chHHHH
Confidence 997542 35567777878776 8899997432 21 122344566789999999999999999884 23444
Q ss_pred HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCC-CCCccchhHHHHHHHHHHHHcCCC----hHHHHHHHHHHHH
Q 011689 361 TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCV-PVDTCGAGDAYASGILYGILRGVS----DLKGMGALAARIA 435 (479)
Q Consensus 361 a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~----~l~eAl~~A~a~A 435 (479)
+..+.+.+++.||+|+|.+|++++.+++.+++|+++++ ++|||||||+|+|||+++|+++++ ++++|+++|+++|
T Consensus 187 ~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vDttGAGDaF~Agfl~~l~~~~~~~~~~~~~a~~~a~~~a 266 (277)
T cd01946 187 ARLILAMGPKALIIKRGEYGALLFTDDGYFAAPAYPLESVFDPTGAGDTFAGGFIGYLASQKDTSEANMRRAIIYGSAMA 266 (277)
T ss_pred HHHHHHcCCCEEEEecCCCcEEEEECCceEEcCCcccCccCCCCCchHHHHHHHHHHHHhCCCcchhhHHHHHHHhHHHH
Confidence 44566779999999999999999988888889998886 899999999999999999998842 3899999999999
Q ss_pred HHHhcccCCC
Q 011689 436 ATVVGQQGTR 445 (479)
Q Consensus 436 a~~v~~~G~~ 445 (479)
+++|++.|+.
T Consensus 267 a~~~~~~G~~ 276 (277)
T cd01946 267 SFCVEDFGTK 276 (277)
T ss_pred hhhhhhcCCC
Confidence 9999999975
No 47
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=8.4e-30 Score=252.19 Aligned_cols=300 Identities=20% Similarity=0.193 Sum_probs=238.2
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
.+.+|+|+|+.|+|.|+... ...+.+|.|.++++. ......+||+ +|||.+++.||.
T Consensus 9 ~~~kVLVvGDvmLDrY~~G~-------------~~RISPEAPVPVv~v---~~e~~rlGGA-aNVa~NiasLGa------ 65 (467)
T COG2870 9 KQAKVLVVGDVMLDRYWYGK-------------VSRISPEAPVPVVKV---EKEEERLGGA-ANVAKNIASLGA------ 65 (467)
T ss_pred cCCcEEEEcceeeeeecccc-------------ccccCCCCCCceEEe---cccccccccH-HHHHHHHHHcCC------
Confidence 45679999999999999743 344556777666543 4677889886 899999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCC---hhhhhhccC
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD---PCLVNLISK 277 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~---~~~~~~l~~ 277 (479)
++.++|.+|+|+.|+.+.+.|...+|+..+++.+..+|.....++..+.+--.+.+.......... +...+.+.+
T Consensus 66 --~a~l~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~ 143 (467)
T COG2870 66 --NAYLVGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKS 143 (467)
T ss_pred --CEEEEEeeccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeecccceEEEecccccCcchhHHHHHHHHHHHhhc
Confidence 899999999999999999999999999888888888888888777644443333332111111111 234566889
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCc
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKES 357 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~ 357 (479)
.++++++.|.-..- ..+..+++.||++|++|.+||-+.++. -...+..|+||..|++...|....+.
T Consensus 144 ~~~vVLSDY~KG~L---~~~q~~I~~ar~~~~pVLvDPKg~Df~----------~Y~GAtLiTPN~~E~~~~vg~~~~e~ 210 (467)
T COG2870 144 FDALVLSDYAKGVL---TNVQKMIDLAREAGIPVLVDPKGKDFE----------KYRGATLITPNLKEFEEAVGKCKSEE 210 (467)
T ss_pred CCEEEEeccccccc---hhHHHHHHHHHHcCCcEEECCCCcchh----------hhCCCeecCCCHHHHHHHHcccccHH
Confidence 99999999975543 237888999999999999999765431 12689999999999999998764432
Q ss_pred -HHH-HHHHHh-cCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 358 -PES-TTRYLS-HFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 358 -~~~-a~~~l~-~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
..+ +.++.+ .....++||++++|..+++.++..|+|+...++.|.|||||+-+|.|.++++.|.+ +++||.+||++
T Consensus 211 el~~~g~kL~~~~~L~alLvTRsE~GMtL~~~~~~~h~pt~AkEVyDVTGAGDTVIa~la~~laaG~s-~~eAc~lAN~A 289 (467)
T COG2870 211 ELEERGQKLKEELDLSALLVTRSEKGMTLFQEGKPLHFPARAKEVYDVTGAGDTVIAVLAAALAAGAS-LEEACELANAA 289 (467)
T ss_pred HHHHHHHHHHHhhCcceEEEEeccCCceeecCCcccccchhheeeeeccCCCchHHHHHHHHHHcCCC-HHHHHHHhhhh
Confidence 222 445554 46799999999999999998888999999889999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
|+.++.+.|+.. -+.+|+...+..+
T Consensus 290 agiVVgKlGTat--vs~~EL~nAV~pn 314 (467)
T COG2870 290 AGIVVGKLGTAT--VSPEELEMAVAPN 314 (467)
T ss_pred cceEEeecccee--ecHHHHHhhhccC
Confidence 999999999874 4788888754433
No 48
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.7e-26 Score=214.34 Aligned_cols=282 Identities=20% Similarity=0.251 Sum_probs=213.5
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
++..|+|+|...+|++..++. +|++.... ....-..+-||.+.|++.+|+.||.
T Consensus 3 ~~k~VLcVG~~~lD~iTivd~-----~~fe~~~~---------------r~~~g~wqRgG~asNvcTvlrlLG~------ 56 (308)
T KOG2947|consen 3 EPKQVLCVGCTVLDVITIVDK-----YPFEDSEI---------------RCLSGRWQRGGNASNVCTVLRLLGA------ 56 (308)
T ss_pred CcceEEEeccEEEEEEEeccC-----CCCCccce---------------ehhhhhhhcCCCcchHHHHHHHhCC------
Confidence 345799999999999999886 44432211 1124456789999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEEC-CCCCeEEEEecCCCCCCCCChhhhhhccCCc
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTT-PDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~-~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad 279 (479)
++.|+|.+.....-+++++.|++.|||+++....+...+.+.++++ ..|.||++.+......++..+...-.+.+..
T Consensus 57 --~cef~Gvlsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~dks~p~vT~~dF~kvdl~qy~ 134 (308)
T KOG2947|consen 57 --PCEFFGVLSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYCDKSLPDVTATDFEKVDLTQYG 134 (308)
T ss_pred --chheeeecccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEecCCCccccHHHhhhcccceee
Confidence 8999999999999999999999999999998776665555555555 5688999999888888888887766688999
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHH----hcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAH----RSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK 355 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak----~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~ 355 (479)
|||+.+..+ +++...+..+.+.-. +.++.+++|+-.. +.+. -.+...+|+++++++=++.+.-.
T Consensus 135 WihfE~Rnp--~etlkM~~~I~~~N~r~pe~qrI~vSvd~en~------req~-~~l~am~DyVf~sK~~a~~~gfk--- 202 (308)
T KOG2947|consen 135 WIHFEARNP--SETLKMLQRIDAHNTRQPEEQRIRVSVDVENP------REQL-FQLFAMCDYVFVSKDVAKHLGFK--- 202 (308)
T ss_pred eEEEecCCh--HHHHHHHHHHHHhhcCCCccceEEEEEEecCc------HHHH-HHHhhcccEEEEEHHHHhhhccC---
Confidence 999996532 122334444443332 2457788887432 2333 34668999999999988877432
Q ss_pred CcHHHHHH-HH---hcC-C-CEEEEeecCCCeEEE-ECCeEEEeCCCC-CCCCCccchhHHHHHHHHHHHH-cCCChHHH
Q 011689 356 ESPESTTR-YL---SHF-V-PLVSVTDGARGSYIG-VKGEAVYIPPSP-CVPVDTCGAGDAYASGILYGIL-RGVSDLKG 426 (479)
Q Consensus 356 ~~~~~a~~-~l---~~g-~-~~VVVT~G~~Ga~~~-~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~-~g~~~l~e 426 (479)
+++++.+ +. .++ . +.+|+-.+++|+-.. .+|+.+++++++ -++|||.||||+|.|||||+++ ++.+ +.+
T Consensus 203 -s~rea~~~l~~r~~~~~pkpv~I~~w~~eGA~~l~adg~yfev~a~~ppkvVD~lg~~DtF~A~vIyA~lk~~r~-l~e 280 (308)
T KOG2947|consen 203 -SPREACEGLYGRVPKGKPKPVLICPWASEGAGALGADGKYFEVDAFKPPKVVDTLGAGDTFNAGVIYALLKQGRS-LAE 280 (308)
T ss_pred -CHHHHHHHHHhhcccCCCCcEEEeccccccccccCCCCCEEecCCCCCccceeeccCCCcchHHHHHHHHHhhhh-HHH
Confidence 3444443 22 222 2 467788999998655 567889999885 5799999999999999999965 6777 999
Q ss_pred HHHHHHHHHHHHhcccCC
Q 011689 427 MGALAARIAATVVGQQGT 444 (479)
Q Consensus 427 Al~~A~a~Aa~~v~~~G~ 444 (479)
|+.||+++|+.++...|-
T Consensus 281 Avdfg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 281 AVDFGNRVASKKLGGQGF 298 (308)
T ss_pred HHHHHHHhhhcccccccc
Confidence 999999999999998874
No 49
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).
Probab=99.94 E-value=9.5e-26 Score=210.95 Aligned_cols=192 Identities=31% Similarity=0.381 Sum_probs=152.0
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+++|++++|.+..++. +|. .+.. .........+||++.|+|.+|++||. +
T Consensus 1 ~v~~iG~~~~D~~~~~~~-----~~~-~~~~--------------~~~~~~~~~~GG~~~n~a~~l~~LG~--------~ 52 (196)
T cd00287 1 RVLVVGSLLVDVILRVDA-----LPL-PGGL--------------VRPGDTEERAGGGAANVAVALARLGV--------S 52 (196)
T ss_pred CEEEEccceEEEEEEecc-----CCC-CCCe--------------EEeceeeecCCCcHHHHHHHHHHCCC--------c
Confidence 489999999999999875 111 1111 12236788999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEEE
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIV 283 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i 283 (479)
+.++| +|++|+
T Consensus 53 ~~~~~---------------------------------------------------------------------~~~v~i 63 (196)
T cd00287 53 VTLVG---------------------------------------------------------------------ADAVVI 63 (196)
T ss_pred EEEEE---------------------------------------------------------------------ccEEEE
Confidence 99999 899999
Q ss_pred eccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC--cH-HH
Q 011689 284 EGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE--SP-ES 360 (479)
Q Consensus 284 ~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~--~~-~~ 360 (479)
+++.+. .+.+.++++.+++.+.++++|++...... ...+ +..+++++|++++|.+|++.+++....+ +. +.
T Consensus 64 ~~~~~~----~~~~~~~~~~~~~~~~~v~~D~~~~~~~~-~~~~-~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~ 137 (196)
T cd00287 64 SGLSPA----PEAVLDALEEARRRGVPVVLDPGPRAVRL-DGEE-LEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEA 137 (196)
T ss_pred ecccCc----HHHHHHHHHHHHHcCCeEEEeCCcccccc-ccch-HHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHH
Confidence 986532 36778888999999999999998643211 1111 4457789999999999999999864322 11 33
Q ss_pred HHHHHhcCCCEEEEeecCCCeEEEE-CCeEEEeCCCCCCCCCccchhHHHHHHHHHHHH
Q 011689 361 TTRYLSHFVPLVSVTDGARGSYIGV-KGEAVYIPPSPCVPVDTCGAGDAYASGILYGIL 418 (479)
Q Consensus 361 a~~~l~~g~~~VVVT~G~~Ga~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 418 (479)
+.++++.+++.+|+|+|++|+++++ ++..+++|+++++++||+||||+|+|||+++++
T Consensus 138 ~~~l~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 138 AALLLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPVKVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred HHHHHhcCCCEEEEEECCCccEEEecCCceEEcCCccCCcccCCCchHHHHHHHHHHhC
Confidence 4556778899999999999999998 777888998888899999999999999999873
No 50
>PRK12412 pyridoxal kinase; Reviewed
Probab=99.74 E-value=2.7e-16 Score=155.43 Aligned_cols=221 Identities=19% Similarity=0.156 Sum_probs=145.9
Q ss_pred EEEEeCCCchHHH-HH---HHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccC--Cc
Q 011689 206 MTGSVGSDPLGGF-YR---AKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISK--TN 279 (479)
Q Consensus 206 ~ig~VG~D~~G~~-i~---~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~--ad 279 (479)
+++.=|.|..|-. +. +.++..|+.... ..+++...+..+......++...+.+ ......++++ .+
T Consensus 4 vl~iag~D~sggaGi~aD~~t~~~lg~~~~~-------v~Ta~t~q~~~~~~~~~v~~~~~~~i--~~q~~~l~~d~~~~ 74 (268)
T PRK12412 4 ALTIAGSDTSGGAGIQADLKTFQELGVYGMT-------SLTTIVTMDPHNGWAHNVFPIPASTL--KPQLETTIEGVGVD 74 (268)
T ss_pred EEEEEeeCCCchHHHHHHHHHHHHcCCeece-------eeeEEEeEcCCCCcEEEEEeCCHHHH--HHHHHHHHhCCCCC
Confidence 3555566665522 22 344555655432 23444444433333333343321111 1122333444 78
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCE-EEEeCCChh------hhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGAL-VAVTASDVT------CIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~-v~~D~~~~~------~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
++.+ |+.. +.+.+..+++.+++.+.+ +++||.... ..+.....+.+.+++++|+++||..|++.|+|.
T Consensus 75 ~iki-G~l~----~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g~ 149 (268)
T PRK12412 75 ALKT-GMLG----SVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLSGV 149 (268)
T ss_pred EEEE-CCCC----CHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHhCc
Confidence 8888 5432 256777788888877776 999996311 111122334556789999999999999999986
Q ss_pred CCC--CcHHH-HHHHHhcCCCEEEEeecCCCe------EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCCh
Q 011689 353 SSK--ESPES-TTRYLSHFVPLVSVTDGARGS------YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSD 423 (479)
Q Consensus 353 ~~~--~~~~~-a~~~l~~g~~~VVVT~G~~Ga------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 423 (479)
... ++... +.++++.|++.|+||.|..|+ +++.++..++++.++++.+||+||||+|+|+|+++|++|++
T Consensus 150 ~~~~~~~~~~aa~~l~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~t~GaGD~f~aa~aa~l~~g~~- 228 (268)
T PRK12412 150 KINSLEDMKEAAKKIHALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKIDTTNTHGAGCTYSAAITAELAKGKP- 228 (268)
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCccCCCCCCchHHHHHHHHHHHHHCCCC-
Confidence 422 22333 445667799999999998763 34555666678888889999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 011689 424 LKGMGALAARIAATVVGQ 441 (479)
Q Consensus 424 l~eAl~~A~a~Aa~~v~~ 441 (479)
+++|+++|.++....+..
T Consensus 229 l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 229 VKEAVKTAKEFITAAIRY 246 (268)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999888865
No 51
>PRK05756 pyridoxamine kinase; Validated
Probab=99.72 E-value=1.7e-16 Score=158.21 Aligned_cols=164 Identities=17% Similarity=0.084 Sum_probs=123.4
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcC--CEEEEeCCChh-----h-hhhhhHHHHHHhcccCcEEEcCHHHH
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTASDVT-----C-IERHYDDFWEIVGNYADIVFANSDEA 346 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g--~~v~~D~~~~~-----~-~~~~~~~~~~~ll~~~Dvl~~N~~Ea 346 (479)
+..++++ ++|+... ....+.+.++++.+++.+ ..+++||.-.. + .+.....+.+.+++++|++++|..|+
T Consensus 72 l~~~~~v-~~G~l~~-~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea 149 (286)
T PRK05756 72 LGECDAV-LSGYLGS-AEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFEL 149 (286)
T ss_pred cccCCEE-EECCCCC-HHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHH
Confidence 3468866 6687543 334678888888888765 56888976211 1 11222344455889999999999999
Q ss_pred HHhhCCCCCC--cHHH-HHHHHhcCCCEEEEeecCC--------CeEEEECCeEEEeCCCCCCC-CCccchhHHHHHHHH
Q 011689 347 RAFCHFSSKE--SPES-TTRYLSHFVPLVSVTDGAR--------GSYIGVKGEAVYIPPSPCVP-VDTCGAGDAYASGIL 414 (479)
Q Consensus 347 ~~L~g~~~~~--~~~~-a~~~l~~g~~~VVVT~G~~--------Ga~~~~~~~~~~vpa~~v~v-vDttGAGDaF~Agfl 414 (479)
+.|+|....+ +... +.+++..|++.||||.|.. |++++++++.++++.+++++ +|++||||+|+|+|+
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~GaGD~f~a~~~ 229 (286)
T PRK05756 150 EWLSGRPVETLEDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFL 229 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCccCCCCCCCChHHHHHHHHH
Confidence 9999864322 2333 3456677999999999876 47777777677777777777 799999999999999
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 415 YGILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 415 ~~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
+++++|++ +++|+++|++.....+..
T Consensus 230 a~l~~g~~-~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 230 ARLLQGGS-LEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHhcCCC-HHHHHHHHHHHHHHHHHH
Confidence 99999998 999999999999888865
No 52
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.
Probab=99.72 E-value=1.8e-16 Score=155.26 Aligned_cols=162 Identities=17% Similarity=0.133 Sum_probs=118.2
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhc--CCEEEEeCCC----hhh-hhhhhHHHHHHhcc-cCcEEEcCHHHHH
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRS--GALVAVTASD----VTC-IERHYDDFWEIVGN-YADIVFANSDEAR 347 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~--g~~v~~D~~~----~~~-~~~~~~~~~~~ll~-~~Dvl~~N~~Ea~ 347 (479)
...+++ ++|+... ....+.+.++++.++++ +.++++||.- ..+ ......+.+..++. ++|++++|..|++
T Consensus 71 ~~~~~v-~~G~l~~-~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~ 148 (254)
T cd01173 71 LEYDAV-LTGYLGS-AEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELE 148 (254)
T ss_pred ccCCEE-EEecCCC-HHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHH
Confidence 457777 5577432 33478888999988877 8999999851 111 01112233334444 9999999999999
Q ss_pred HhhCCCCC--CcHHH-HHHHHhcCCCEEEEeecCC------CeEEEECCeEEEeCCCCCC-CCCccchhHHHHHHHHHHH
Q 011689 348 AFCHFSSK--ESPES-TTRYLSHFVPLVSVTDGAR------GSYIGVKGEAVYIPPSPCV-PVDTCGAGDAYASGILYGI 417 (479)
Q Consensus 348 ~L~g~~~~--~~~~~-a~~~l~~g~~~VVVT~G~~------Ga~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l 417 (479)
.|+|.+.. ++.+. +.++++.|++.|+||.|.. |++++++++.+.++.++++ ++|++||||+|+|||++++
T Consensus 149 ~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~~~~~l 228 (254)
T cd01173 149 LLTGKKINDLEDAKAAARALHAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARL 228 (254)
T ss_pred HHcCCCcCCHHHHHHHHHHHHHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeeccCCCCCcCChHHHHHHHHHHHH
Confidence 99986532 22333 4456677999999999985 7877776654444444444 7999999999999999999
Q ss_pred HcCCChHHHHHHHHHHHHHHHhc
Q 011689 418 LRGVSDLKGMGALAARIAATVVG 440 (479)
Q Consensus 418 ~~g~~~l~eAl~~A~a~Aa~~v~ 440 (479)
++|++ +++|+++|++.....+.
T Consensus 229 ~~g~~-~~~a~~~A~~~~~~~i~ 250 (254)
T cd01173 229 LKGKS-LAEALEKALNFVHEVLE 250 (254)
T ss_pred HcCCC-HHHHHHHHHHHHHHHHH
Confidence 99998 99999999999877764
No 53
>TIGR00687 pyridox_kin pyridoxal kinase. ThiD and related proteins form an outgroup.
Probab=99.72 E-value=2.2e-16 Score=157.41 Aligned_cols=162 Identities=18% Similarity=0.159 Sum_probs=118.4
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcC--CEEEEeCC------ChhhhhhhhHHHHHHhcccCcEEEcCHHHH
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTAS------DVTCIERHYDDFWEIVGNYADIVFANSDEA 346 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g--~~v~~D~~------~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea 346 (479)
+.++|++ ++|+... ....+.+.++++.+++.+ ..+++||. .....+.....+.+.+++++|++++|..|+
T Consensus 72 ~~~~d~v-~~G~l~~-~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll~~adii~pN~~Ea 149 (286)
T TIGR00687 72 LNQCDAV-LSGYLGS-AEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAIPVADIITPNQFEL 149 (286)
T ss_pred cccCCEE-EECCCCC-HHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhccccccEecCCHHHH
Confidence 4578986 6687532 234678888888888765 67889994 111112222334455789999999999999
Q ss_pred HHhhCCCCCC--cHHH-HHHHHhcCCCEEEEe-ecCCCe--------EEEECCeEEEeCCCCCC-CCCccchhHHHHHHH
Q 011689 347 RAFCHFSSKE--SPES-TTRYLSHFVPLVSVT-DGARGS--------YIGVKGEAVYIPPSPCV-PVDTCGAGDAYASGI 413 (479)
Q Consensus 347 ~~L~g~~~~~--~~~~-a~~~l~~g~~~VVVT-~G~~Ga--------~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agf 413 (479)
+.|+|.+..+ +... +.++++.|++.|||| .|.+|+ +++++++.++++.+++. ++|++||||+|+|||
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~A~~ 229 (286)
T TIGR00687 150 ELLTGRKINTVEEALAAADALIAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLAVFMRQPVGTGDLIAALL 229 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCcCCCCCCCChHHHHHHHH
Confidence 9999864322 2323 344667799999999 688875 44555656677766666 699999999999999
Q ss_pred HHHHHcCCChHHHHHHHHHHHHHHHh
Q 011689 414 LYGILRGVSDLKGMGALAARIAATVV 439 (479)
Q Consensus 414 l~~l~~g~~~l~eAl~~A~a~Aa~~v 439 (479)
++++++|++ +++|+++|+++...++
T Consensus 230 l~~l~~g~~-~~~al~~A~~~v~~~l 254 (286)
T TIGR00687 230 LATLLHGNS-LKEALEKTVSAVYHVL 254 (286)
T ss_pred HHHHhcCCC-HHHHHHHHHHHHHHHH
Confidence 999999998 9999999999944444
No 54
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=99.70 E-value=1.2e-15 Score=147.99 Aligned_cols=158 Identities=15% Similarity=0.115 Sum_probs=119.5
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhc-CCEEEEeCCChh-----h-hhhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRS-GALVAVTASDVT-----C-IERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~-g~~v~~D~~~~~-----~-~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
+.+++.+ |+.. ..+.+..+.+.+++. +.++++||.... + .+.....+.+.+++++|+++||..|++.|
T Consensus 68 ~~~~i~~-G~l~----~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 142 (242)
T cd01169 68 PVDAIKI-GMLG----SAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELL 142 (242)
T ss_pred CCCEEEE-CCCC----CHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHH
Confidence 5788888 6642 245666666777665 789999986321 1 11122234456679999999999999999
Q ss_pred hCCCCCC--cHHH-HHHHHhcCCCEEEEeecCCC----e-EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC
Q 011689 350 CHFSSKE--SPES-TTRYLSHFVPLVSVTDGARG----S-YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV 421 (479)
Q Consensus 350 ~g~~~~~--~~~~-a~~~l~~g~~~VVVT~G~~G----a-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 421 (479)
+|....+ +.+. +.++.+.+++.||||.|.+| + +++.+++.++++.++++++|++||||+|+|+|++++++|+
T Consensus 143 ~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~a~l~~g~ 222 (242)
T cd01169 143 TGLEIATEEDMMKAAKALLALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRIDTKNTHGTGCTLSSAIAANLAKGL 222 (242)
T ss_pred hCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCCceeEEEEECCcEEEEecceeCCCCCCChHHHHHHHHHHHHHCCC
Confidence 9965322 2223 34456679999999999885 3 5667777788888888899999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhc
Q 011689 422 SDLKGMGALAARIAATVVG 440 (479)
Q Consensus 422 ~~l~eAl~~A~a~Aa~~v~ 440 (479)
+ +++|+++|++.-...+.
T Consensus 223 ~-~~~A~~~A~~~~~~~i~ 240 (242)
T cd01169 223 S-LEEAVREAKEYVTQAIR 240 (242)
T ss_pred C-HHHHHHHHHHHHHHHHH
Confidence 8 99999999998877664
No 55
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=99.69 E-value=9.2e-16 Score=151.29 Aligned_cols=160 Identities=14% Similarity=0.142 Sum_probs=120.4
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCC-EEEEeCCChh------hhhhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGA-LVAVTASDVT------CIERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~-~v~~D~~~~~------~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
..+.+.+ |+.. ..+.+..+++.+++.+. ++++||.... +.+.....+.+.+++++|+++||..|++.|
T Consensus 73 ~~~ai~i-G~l~----~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 147 (266)
T PRK06427 73 RIDAVKI-GMLA----SAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLLPLATLITPNLPEAEAL 147 (266)
T ss_pred CCCEEEE-CCcC----CHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhCcCeEEcCCHHHHHHH
Confidence 5788888 5532 25666777777777775 7999986211 111112234445789999999999999999
Q ss_pred hCCCCCC--c-HHH-HHHHHhcCCCEEEEeecC--CCe----EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc
Q 011689 350 CHFSSKE--S-PES-TTRYLSHFVPLVSVTDGA--RGS----YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR 419 (479)
Q Consensus 350 ~g~~~~~--~-~~~-a~~~l~~g~~~VVVT~G~--~Ga----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 419 (479)
+|....+ + .+. +.++.+.+++.||||.|. +|. +++++++.++++.++++.+|++||||+|+|+|++++++
T Consensus 148 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~~~l~~ 227 (266)
T PRK06427 148 TGLPIADTEDEMKAAARALHALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRIPTKNTHGTGCTLSAAIAAELAK 227 (266)
T ss_pred hCCCCCCcHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeECCCCCCChHHHHHHHHHHHHHC
Confidence 9864222 1 333 444666789999999998 554 56666666778888888899999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhccc
Q 011689 420 GVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 420 g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
|++ +++|+++|++++..++.+.
T Consensus 228 g~~-l~~A~~~A~~~~~~~i~~~ 249 (266)
T PRK06427 228 GAS-LLDAVQTAKDYVTRAIRHA 249 (266)
T ss_pred CCC-HHHHHHHHHHHHHHHHHHH
Confidence 998 9999999999999888763
No 56
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=99.69 E-value=1.5e-15 Score=148.92 Aligned_cols=159 Identities=14% Similarity=0.115 Sum_probs=121.3
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCC-EEEEeCCCh-----hhhh-hhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGA-LVAVTASDV-----TCIE-RHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~-~v~~D~~~~-----~~~~-~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
+.+.+.+ |+.. ..+.+..+++.+++.+. ++++||... .+.. .....+.+.+++++|+++||..|++.|
T Consensus 67 ~~~aiki-G~l~----~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 141 (254)
T TIGR00097 67 PVDAAKT-GMLA----SAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLLPLATLITPNLPEAEAL 141 (254)
T ss_pred CCCEEEE-CCcC----CHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhccccccEecCCHHHHHHH
Confidence 4677887 4421 25777888888888888 699998621 1111 111233456779999999999999999
Q ss_pred hCCCCC--CcHHH-HHHHHhcCCCEEEEeecC----CCe-EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC
Q 011689 350 CHFSSK--ESPES-TTRYLSHFVPLVSVTDGA----RGS-YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV 421 (479)
Q Consensus 350 ~g~~~~--~~~~~-a~~~l~~g~~~VVVT~G~----~Ga-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 421 (479)
++.... ++... +.++...|++.|+||.|. +|+ +++++++.++++.++++++|++||||+|.|+|++++++|+
T Consensus 142 ~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~aalaa~la~g~ 221 (254)
T TIGR00097 142 LGTKIRTEQDMIKAAKKLRELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRIETKNTHGTGCTLSAAIAANLAKGL 221 (254)
T ss_pred hCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEecccCCCCCCChHHHHHHHHHHHHHCCC
Confidence 986422 12333 445667799999999997 344 5667777778888889999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhcc
Q 011689 422 SDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 422 ~~l~eAl~~A~a~Aa~~v~~ 441 (479)
+ +++|+++|++++...+.+
T Consensus 222 ~-l~eA~~~A~~~~~~~i~~ 240 (254)
T TIGR00097 222 S-LKEAVKEAKEFVTGAIRY 240 (254)
T ss_pred C-HHHHHHHHHHHHHHHHHH
Confidence 8 999999999999988865
No 57
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=99.68 E-value=1.7e-15 Score=150.73 Aligned_cols=163 Identities=17% Similarity=0.171 Sum_probs=116.7
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHh--cCCEEEEeCCChh-----h-hhhhhHHHHHHhcccCcEEEcCHHHH
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHR--SGALVAVTASDVT-----C-IERHYDDFWEIVGNYADIVFANSDEA 346 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~--~g~~v~~D~~~~~-----~-~~~~~~~~~~~ll~~~Dvl~~N~~Ea 346 (479)
+.++|++++ ||.. .+...+.+.++++..+. .+.++++||.-.. + .+.....+.+.+++++|+++||..|+
T Consensus 86 l~~~d~i~~-G~l~-s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea 163 (281)
T PRK08176 86 LRQLRAVTT-GYMG-SASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFEL 163 (281)
T ss_pred cccCCEEEE-CCCC-CHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhHhhcCEeCCCHHHH
Confidence 347899998 6642 33345666666665543 4678999997211 1 11122223345789999999999999
Q ss_pred HHhhCCCCCC--cHHH-HHHHHhcCCCEEEEeecCCC-------eEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHH
Q 011689 347 RAFCHFSSKE--SPES-TTRYLSHFVPLVSVTDGARG-------SYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYG 416 (479)
Q Consensus 347 ~~L~g~~~~~--~~~~-a~~~l~~g~~~VVVT~G~~G-------a~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 416 (479)
+.|+|....+ +..+ +.++++.|++.||||.|..| ++++++++.+.. ..+...+|++||||+|+|+|+++
T Consensus 164 ~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~GaGD~faa~~~a~ 242 (281)
T PRK08176 164 EILTGKPCRTLDSAIAAAKSLLSDTLKWVVITSAAGNEENQEMQVVVVTADSVNVI-SHPRVDTDLKGTGDLFCAELVSG 242 (281)
T ss_pred HHHhCCCCCCHHHHHHHHHHHHhcCCCEEEEeeccCCCCCCcEEEEEEeCCceEEE-ecCccCCCCCChhHHHHHHHHHH
Confidence 9999864222 2223 45566779999999999988 566666654433 34445679999999999999999
Q ss_pred HHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 417 ILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 417 l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
+++|++ +++|+++|+..-...+..
T Consensus 243 l~~g~~-l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 243 LLKGKA-LTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HhcCCC-HHHHHHHHHHHHHHHHHH
Confidence 999998 999999999988777754
No 58
>PRK07105 pyridoxamine kinase; Validated
Probab=99.67 E-value=8.6e-16 Score=153.07 Aligned_cols=163 Identities=18% Similarity=0.090 Sum_probs=118.4
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh----hh--hhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT----CI--ERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~----~~--~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.+++|++ |+.. .+...+.+.++++.+++.+.++++||.... +. +....+.++.+++++|+++||..|++.|+
T Consensus 75 ~~~aik~-G~l~-~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~ 152 (284)
T PRK07105 75 KFDAIYS-GYLG-SPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLL 152 (284)
T ss_pred ccCEEEE-CcCC-CHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHc
Confidence 6888886 6643 333456666677666777889999997321 00 11112334568899999999999999999
Q ss_pred CCCCC------CcHHH-HHHHHhcCCCEEEEee-----cCCCeEEEECC--eEEEeCCCCCCCCCccchhHHHHHHHHHH
Q 011689 351 HFSSK------ESPES-TTRYLSHFVPLVSVTD-----GARGSYIGVKG--EAVYIPPSPCVPVDTCGAGDAYASGILYG 416 (479)
Q Consensus 351 g~~~~------~~~~~-a~~~l~~g~~~VVVT~-----G~~Ga~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 416 (479)
|.... ++.+. +.++.+.|++.||||. |..|+++++++ ..++.+.+.+. +|++||||+|+|||+++
T Consensus 153 g~~~~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~aa~~~~ 231 (284)
T PRK07105 153 DKPYLEKSYSEEEIKQLLRKLADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYIP-AHYPGTGDIFTSVITGS 231 (284)
T ss_pred CCCcCcCCCCHHHHHHHHHHHHhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeecccC-CCcCChhHHHHHHHHHH
Confidence 86421 12233 3445567899999999 67788887643 34445544444 89999999999999999
Q ss_pred HHcCCChHHHHHHHHHHHHHHHhcccC
Q 011689 417 ILRGVSDLKGMGALAARIAATVVGQQG 443 (479)
Q Consensus 417 l~~g~~~l~eAl~~A~a~Aa~~v~~~G 443 (479)
+++|++ +++|+++|.+++...+.+..
T Consensus 232 l~~g~~-l~~av~~A~~~~~~~i~~~~ 257 (284)
T PRK07105 232 LLQGDS-LPIALDRAVQFIEKGIRATL 257 (284)
T ss_pred HhCCCC-HHHHHHHHHHHHHHHHHHHH
Confidence 999998 99999999999998887653
No 59
>PRK12413 phosphomethylpyrimidine kinase; Provisional
Probab=99.67 E-value=7.7e-16 Score=150.71 Aligned_cols=221 Identities=16% Similarity=0.135 Sum_probs=136.7
Q ss_pred EEEEEEeCCCchHHH-HHHHHHh---cCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCc
Q 011689 204 VAMTGSVGSDPLGGF-YRAKLRR---ANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 204 v~~ig~VG~D~~G~~-i~~~L~~---~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad 279 (479)
..+++.=|.|..|-. +...++- .|+. ...+.+++...+..|.. + ..-....+ .+.... +...+
T Consensus 4 ~~vl~iag~d~~ggaG~~aD~~~~~~~~~~-------~~~~~t~~t~~~~~G~~--v-~~~~~~~l--~~~l~~-l~~~~ 70 (253)
T PRK12413 4 NYILAISGNDIFSGGGLHADLATYTRNGLH-------GFVAVTCLTAMTEKGFE--V-FPVDKEIF--QQQLDS-LKDVP 70 (253)
T ss_pred CeEEEEeeeCCCCHHHHHHHHHHHHHcCCc-------cCeeeEEEecccCCceE--E-EECCHHHH--HHHHHH-hhCCC
Confidence 356777788876543 5544443 2222 23444555555555532 2 11111111 111111 23445
Q ss_pred EEEEe-ccccCCcchHHHHHHHHHHHH-hcCCEEEEeCCChhh-----hhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 280 IFIVE-GYLFELPDTIRTITKACEVAH-RSGALVAVTASDVTC-----IERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 280 ~v~i~-g~~~~~~~~~~~~~~~l~~ak-~~g~~v~~D~~~~~~-----~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
+..+. |+.. ..+....+++.++ ..+.++++||..... ......+.++.+++++|+++||+.|++.|+|.
T Consensus 71 ~~~i~~G~l~----~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g~ 146 (253)
T PRK12413 71 FSAIKIGLLP----NVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSGK 146 (253)
T ss_pred CCEEEECCcC----CHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhCc
Confidence 55554 5532 1344455555554 468899999863211 01111233445679999999999999999996
Q ss_pred CCCC--cHHH-HHHHHhcCCCEEEEeecCCCe-----EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChH
Q 011689 353 SSKE--SPES-TTRYLSHFVPLVSVTDGARGS-----YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDL 424 (479)
Q Consensus 353 ~~~~--~~~~-a~~~l~~g~~~VVVT~G~~Ga-----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l 424 (479)
+..+ +.+. +.++++.|++.||||.|.+|+ .++..++.++++.+++..+|++||||+|+|+|+++|++|++ +
T Consensus 147 ~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGDaf~a~~~~~l~~g~~-l 225 (253)
T PRK12413 147 EIKTLEDMKEAAKKLYDLGAKAVVIKGGNRLSQKKAIDLFYDGKEFVILESPVLEKNNIGAGCTFASSIASQLVKGKS-P 225 (253)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcceEEEEcCCEEEEEeecccCCCCCChHHHHHHHHHHHHHcCCC-H
Confidence 5321 2333 445667799999999998642 23334444455666777899999999999999999999998 9
Q ss_pred HHHHHHHHHHHHHHhccc
Q 011689 425 KGMGALAARIAATVVGQQ 442 (479)
Q Consensus 425 ~eAl~~A~a~Aa~~v~~~ 442 (479)
++|+++|.++....+++.
T Consensus 226 ~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 226 LEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999988887653
No 60
>PRK08573 phosphomethylpyrimidine kinase; Provisional
Probab=99.65 E-value=3.4e-15 Score=157.77 Aligned_cols=146 Identities=15% Similarity=0.151 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhcCCEEEEeCCCh------hhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC--CcHHHHHH-H
Q 011689 294 IRTITKACEVAHRSGALVAVTASDV------TCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK--ESPESTTR-Y 364 (479)
Q Consensus 294 ~~~~~~~l~~ak~~g~~v~~D~~~~------~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~--~~~~~a~~-~ 364 (479)
.+.+..+++.+++.+.++++||.-. .+.+.....+.+.+++++|++++|..|++.|+|.... ++.+.+.+ +
T Consensus 83 ~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~~L 162 (448)
T PRK08573 83 REIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKYI 162 (448)
T ss_pred HHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 6788889999999999999998521 1111111234456789999999999999999986422 23344444 4
Q ss_pred Hh-cCCCEEEEeecC----CCe-EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 011689 365 LS-HFVPLVSVTDGA----RGS-YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATV 438 (479)
Q Consensus 365 l~-~g~~~VVVT~G~----~Ga-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~ 438 (479)
.. .|++.||||.|. +|+ +++.++..++++.++++++||+||||+|+|+|++++++|++ +++|+++|+.+....
T Consensus 163 ~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v~~~dt~GAGDaFsAa~aa~l~~G~~-l~eAl~~A~~~~~~a 241 (448)
T PRK08573 163 VEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRVESGCTHGTGCSFSAAIAAGLAKGLD-PEEAIKTAKKFITMA 241 (448)
T ss_pred HHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCcCCCCCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHH
Confidence 43 689999999985 344 45566777788888889999999999999999999999998 999999999999988
Q ss_pred hc
Q 011689 439 VG 440 (479)
Q Consensus 439 v~ 440 (479)
+.
T Consensus 242 l~ 243 (448)
T PRK08573 242 IK 243 (448)
T ss_pred HH
Confidence 88
No 61
>PRK12616 pyridoxal kinase; Reviewed
Probab=99.63 E-value=9.4e-15 Score=144.56 Aligned_cols=159 Identities=16% Similarity=0.134 Sum_probs=118.3
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcC-CEEEEeCCChhh------hhhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSG-ALVAVTASDVTC------IERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g-~~v~~D~~~~~~------~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
..+.+.+ |+.. +.+.+..+.+.+++.+ .++++||..... .+.....+.+.+++.+|+++||..|++.|
T Consensus 74 ~~~aiki-G~l~----s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L 148 (270)
T PRK12616 74 GVDAMKT-GMLP----TVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQL 148 (270)
T ss_pred CCCEEEE-CCCC----CHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHH
Confidence 4678888 5532 2566777777777766 469999974210 11122334445778999999999999999
Q ss_pred hCCC-C--CCcHHH-HHHHHhcCCCEEEEeecCCCe------EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc
Q 011689 350 CHFS-S--KESPES-TTRYLSHFVPLVSVTDGARGS------YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR 419 (479)
Q Consensus 350 ~g~~-~--~~~~~~-a~~~l~~g~~~VVVT~G~~Ga------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 419 (479)
+|.. . .++.+. +.++.+.|++.||||.|..|. +++++++.++++.++++.+|++||||+|+|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~~aa~~l~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~fsaalaa~l~~ 228 (270)
T PRK12616 149 SGMGEIKTVEQMKEAAKKIHELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (270)
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeeeCCCCCCcHHHHHHHHHHHHHHC
Confidence 9852 1 122333 344566799999999998762 55666666677888888899999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhcc
Q 011689 420 GVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 420 g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
|++ +++|+++|.+.....+..
T Consensus 229 g~~-l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 229 GSE-VKEAIYAAKEFITAAIKE 249 (270)
T ss_pred CCC-HHHHHHHHHHHHHHHHHH
Confidence 998 999999999999888765
No 62
>PTZ00344 pyridoxal kinase; Provisional
Probab=99.47 E-value=2.1e-12 Score=129.47 Aligned_cols=159 Identities=13% Similarity=0.162 Sum_probs=107.6
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcC--CEEEEeCCChh----hhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTASDVT----CIERHYDDFWEIVGNYADIVFANSDEARAFCHFS 353 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g--~~v~~D~~~~~----~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~ 353 (479)
.++++|+... +...+.+.++++.+++.+ .++++||.-.. +......+.++.+++++|++++|+.|++.|+|..
T Consensus 79 ~~v~sG~l~~-~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~ll~~~dii~pN~~E~~~L~g~~ 157 (296)
T PTZ00344 79 TYVLTGYINS-ADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYVKEEVVDAYRELIPYADVITPNQFEASLLSGVE 157 (296)
T ss_pred CEEEECCCCC-HHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEeCHHHHHHHHHHhhhCCEEeCCHHHHHHHhCCC
Confidence 5566688642 333455666666556565 57999976211 1112223444567789999999999999999964
Q ss_pred CCC--cHHH-HHHHHhcCCCEEEEe---ecCCC----eEEEEC------CeEEEeCCCCCCCCCccchhHHHHHHHHHHH
Q 011689 354 SKE--SPES-TTRYLSHFVPLVSVT---DGARG----SYIGVK------GEAVYIPPSPCVPVDTCGAGDAYASGILYGI 417 (479)
Q Consensus 354 ~~~--~~~~-a~~~l~~g~~~VVVT---~G~~G----a~~~~~------~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l 417 (479)
..+ +... +.++.+.+++.|||| +|.+| +++... ++.+.+..++++ ++++||||+|+|+|++.+
T Consensus 158 ~~~~~~~~~~~~~l~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~A~~~a~l 236 (296)
T PTZ00344 158 VKDLSDALEAIDWFHEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIE-GRYTGTGDLFAALLLAFS 236 (296)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEeccccC-CCCCCchHHHHHHHHHHH
Confidence 222 2233 344556789999999 56566 444321 334556555555 577999999999999888
Q ss_pred HcCCChHHHHHHHHHHHHHHHhccc
Q 011689 418 LRGVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 418 ~~g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
.+| + +++|+++|.+....++..-
T Consensus 237 ~~g-~-~~~a~~~A~a~~~~~i~~~ 259 (296)
T PTZ00344 237 HQH-P-MDLAVGKAMGVLQDIIKAT 259 (296)
T ss_pred hcC-C-HHHHHHHHHHHHHHHHHHH
Confidence 888 7 9999999999887776553
No 63
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only]
Probab=99.46 E-value=7.5e-13 Score=133.47 Aligned_cols=235 Identities=20% Similarity=0.305 Sum_probs=157.7
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
=+++|...+|+...++.+. +..+. ..........||.+.|.|.++++||. ++
T Consensus 343 Pv~vGa~i~D~~~k~d~d~------K~dG~--------------sy~~~~~Qa~GGVarN~A~a~~~lg~--------d~ 394 (614)
T KOG3009|consen 343 PVSVGATIVDFEAKTDEDV------KDDGG--------------SYNGQVVQAMGGVARNHADALARLGC--------DS 394 (614)
T ss_pred ceeecceEEEeEEeecccc------cccCC--------------cccchhhhhccchhhhHHHHHHHhcC--------Ce
Confidence 4999999999999987521 11111 11236678899999999999999999 89
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEEEe
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIVE 284 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i~ 284 (479)
.+|++||+|..+++.+.. ....-+...+++ ++++++++
T Consensus 395 ~liSavG~d~n~~~~~~~-----------------------------------------~~~~~e~~~dl~-~a~~I~~D 432 (614)
T KOG3009|consen 395 VLISAVGDDNNGHFFRQN-----------------------------------------SHKIVESNEDLL-SADFILLD 432 (614)
T ss_pred eEEEEeccCCcchhhhhh-----------------------------------------hhhhhhhhhhhh-cCCEEEEc
Confidence 999999999322111100 001112233344 79999998
Q ss_pred ccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC----CCCc---
Q 011689 285 GYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFS----SKES--- 357 (479)
Q Consensus 285 g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~----~~~~--- 357 (479)
+.. +...+.++++ ++.+..+|+|.|.+.....+.++- .....++.++||..|+....... +++.
T Consensus 433 sNi-----S~~~Ma~il~-ak~~k~~V~fEPTd~~k~~K~fk~---l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~ 503 (614)
T KOG3009|consen 433 SNI-----SVPVMARILE-AKKHKKQVWFEPTDIDKVKKVFKT---LLVGAITAISPNANELLKAAKLCHVSVNPSVIQT 503 (614)
T ss_pred CCC-----CHHHHHHHHH-hhhccCceEecCCCchhhhhhhhh---cceeeEEeeCCCHHHHHHHhhcCceeeChhhhcc
Confidence 653 2567788887 899999999999876544332221 12245899999999984332211 1111
Q ss_pred ----HHHHH---HHHhcCCCEEEEeecCCCeEEEECCe-----EEEeCCCCC--CCCCccchhHHHHHHHHHHHHcCCCh
Q 011689 358 ----PESTT---RYLSHFVPLVSVTDGARGSYIGVKGE-----AVYIPPSPC--VPVDTCGAGDAYASGILYGILRGVSD 423 (479)
Q Consensus 358 ----~~~a~---~~l~~g~~~VVVT~G~~Ga~~~~~~~-----~~~vpa~~v--~vvDttGAGDaF~Agfl~~l~~g~~~ 423 (479)
.+.+. +.+.......|+|+-.+|+++...+. ....|++.. ++++..||||+|++||+++++++.+
T Consensus 504 ~~~~~~~~~~~~~k~~~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g~i~~l~~~~~- 582 (614)
T KOG3009|consen 504 ADGVLELIEKEKTKLLLNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSGVIAGLAHNKT- 582 (614)
T ss_pred chHHHHHHHHHHHHhhcccceEEEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccceeehhhcCcc-
Confidence 11222 22334567899999999998766542 223344433 6899999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHh
Q 011689 424 LKGMGALAARIAATVV 439 (479)
Q Consensus 424 l~eAl~~A~a~Aa~~v 439 (479)
+.+++.-+..++....
T Consensus 583 v~es~~gg~~~~rall 598 (614)
T KOG3009|consen 583 VVESLQGGQECARALL 598 (614)
T ss_pred hHhhccccHHHHHHHH
Confidence 9999888855554433
No 64
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase
Probab=99.46 E-value=2.5e-12 Score=138.07 Aligned_cols=160 Identities=19% Similarity=0.110 Sum_probs=118.3
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCE-EEEeCCChh-----hh-hhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGAL-VAVTASDVT-----CI-ERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~-v~~D~~~~~-----~~-~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
..+++.+ |+.. ..+.+..+++.+++.+.. +++||.-.. +. +.....+.+.+++++|+++||..|++.|
T Consensus 78 ~~~aik~-G~l~----~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L 152 (502)
T PLN02898 78 PVDVVKT-GMLP----SAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASAL 152 (502)
T ss_pred CCCEEEE-CCcC----CHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHH
Confidence 4577777 5532 256777777777777774 999995211 11 1122233346788999999999999999
Q ss_pred hCCCCCC---cHHH-HHHHHhcCCCEEEEeecCCC------eEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc
Q 011689 350 CHFSSKE---SPES-TTRYLSHFVPLVSVTDGARG------SYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR 419 (479)
Q Consensus 350 ~g~~~~~---~~~~-a~~~l~~g~~~VVVT~G~~G------a~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 419 (479)
+|..... +... +.++.+.|++.||||.|..+ .++++++..++++.+++..+|++|+||+|+|+|++++++
T Consensus 153 ~g~~~~~~~~~~~~~a~~l~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~t~GaGD~fsaaiaa~l~~ 232 (502)
T PLN02898 153 LGGDPLETVADMRSAAKELHKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRIKTRNTHGTGCTLASCIAAELAK 232 (502)
T ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEecceeCCCCCCchhhhHHHHHHHHHHc
Confidence 9753222 2333 44456678999999999753 355666666778888888899999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhccc
Q 011689 420 GVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 420 g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
|++ +++|+++|..+....+.+.
T Consensus 233 G~~-l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 233 GSD-MLSAVKVAKRYVETALEYS 254 (502)
T ss_pred CCC-HHHHHHHHHHHHHHHHHhh
Confidence 998 9999999999999998763
No 65
>PTZ00347 phosphomethylpyrimidine kinase; Provisional
Probab=99.45 E-value=1.5e-12 Score=139.79 Aligned_cols=162 Identities=18% Similarity=0.116 Sum_probs=113.3
Q ss_pred hhccCCcEEEE-eccccCCcchHHHHHHHHHHHHhcCCEEEEeCCCh-----hhhhh-hhH----HHHHHhcccCcEEEc
Q 011689 273 NLISKTNIFIV-EGYLFELPDTIRTITKACEVAHRSGALVAVTASDV-----TCIER-HYD----DFWEIVGNYADIVFA 341 (479)
Q Consensus 273 ~~l~~ad~v~i-~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~-----~~~~~-~~~----~~~~~ll~~~Dvl~~ 341 (479)
.++.+.++..+ .|+.. ..+.+..+++.++ +.++++||... .+... ..+ .+.+.+++.+|+|+|
T Consensus 293 ~l~~d~~~~~Ik~G~l~----s~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitP 366 (504)
T PTZ00347 293 SVMSDFNISVVKLGLVP----TARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITP 366 (504)
T ss_pred HHHhCCCCCEEEECCcC----CHHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeC
Confidence 34455544443 46642 2456666666664 56899998632 11111 011 122357799999999
Q ss_pred CHHHHHHhhCCCCCC---cHHH-HHHHHhcCCCEEEEeecCCC-------eEEEEC--CeEEEeCCCCCCCCCccchhHH
Q 011689 342 NSDEARAFCHFSSKE---SPES-TTRYLSHFVPLVSVTDGARG-------SYIGVK--GEAVYIPPSPCVPVDTCGAGDA 408 (479)
Q Consensus 342 N~~Ea~~L~g~~~~~---~~~~-a~~~l~~g~~~VVVT~G~~G-------a~~~~~--~~~~~vpa~~v~vvDttGAGDa 408 (479)
|..|++.|+|..... +.+. +.++.+.|++.||||.|..| .+++.+ ++.++++.++++++|++||||+
T Consensus 367 N~~Ea~~L~g~~~~~~~~~~~~aa~~l~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~GaGD~ 446 (504)
T PTZ00347 367 NIPEAERILGRKEITGVYEARAAAQALAQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRIATINTHGTGCT 446 (504)
T ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeECCCCCCChHHH
Confidence 999999999963222 2333 34455679999999999863 344543 3567788888889999999999
Q ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 409 YASGILYGILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 409 F~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
|+|+|++++++|++ +++|+++|.+.-...+..
T Consensus 447 fsaaiaa~la~G~~-l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 447 LASAISSFLARGYT-VPDAVERAIGYVHEAIVR 478 (504)
T ss_pred HHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHh
Confidence 99999999999998 999999998888777654
No 66
>cd01171 YXKO-related B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Probab=99.44 E-value=2.4e-12 Score=126.15 Aligned_cols=160 Identities=16% Similarity=0.148 Sum_probs=114.8
Q ss_pred hhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 273 NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
..+...+++++.+ .++. .+.+..+++.+++.+.++++|+......... ... .+.+.+++++||..|++.|++.
T Consensus 73 ~~~~~~d~v~ig~---gl~~-~~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~-~~~--~~~~~~~iltPn~~E~~~L~g~ 145 (254)
T cd01171 73 ELLERADAVVIGP---GLGR-DEEAAEILEKALAKDKPLVLDADALNLLADE-PSL--IKRYGPVVLTPHPGEFARLLGA 145 (254)
T ss_pred hhhccCCEEEEec---CCCC-CHHHHHHHHHHHhcCCCEEEEcHHHHHhhcC-hhh--hccCCCEEECCCHHHHHHHhCC
Confidence 3456789999964 2332 2667788888888899999998754432211 111 2356799999999999999986
Q ss_pred CCCC---cH-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHH
Q 011689 353 SSKE---SP-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMG 428 (479)
Q Consensus 353 ~~~~---~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl 428 (479)
...+ +. +.+.++.+.+ ..+||+.|. +.++++++..++++......++++|+||+|+|.+.+.+.+|++ +.+|+
T Consensus 146 ~~~~~~~~~~~~a~~l~~~~-~~~vvlkG~-~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~g~~-~~eA~ 222 (254)
T cd01171 146 LVEEIQADRLAAAREAAAKL-GATVVLKGA-VTVIADPDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLS-PLEAA 222 (254)
T ss_pred ChhhhhhHHHHHHHHHHHHc-CcEEEEcCC-CCEEECCCCcEEEECCCCcccccCchHHHHHHHHHHHHHcCCC-HHHHH
Confidence 5221 12 3344555555 455666674 6666665455667777778899999999997777777789998 99999
Q ss_pred HHHHHHHHHHhccc
Q 011689 429 ALAARIAATVVGQQ 442 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~ 442 (479)
++|+.+.+.+.+..
T Consensus 223 ~~A~~~~~~a~~~~ 236 (254)
T cd01171 223 ALAVYLHGLAGDLA 236 (254)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998888754
No 67
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=99.34 E-value=2.6e-11 Score=118.42 Aligned_cols=158 Identities=18% Similarity=0.156 Sum_probs=106.2
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh-----h-hhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT-----C-IERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~-----~-~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
..+.+.+ ||.. . .+.+..+.+..++.+.++++||.-.. + .+.....+.+.+++.+|+|.||..|++.|+
T Consensus 60 ~~~aiki-G~l~-~---~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~ 134 (246)
T PF08543_consen 60 KFDAIKI-GYLG-S---AEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLT 134 (246)
T ss_dssp C-SEEEE--S-S-S---HHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHH
T ss_pred cccEEEE-cccC-C---chhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHh
Confidence 6788888 6632 2 34455555555667789999996211 1 122233444558899999999999999999
Q ss_pred CCCCC--CcHHH-HHHHHhcCCCEEEEeecCC----C---eEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcC
Q 011689 351 HFSSK--ESPES-TTRYLSHFVPLVSVTDGAR----G---SYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRG 420 (479)
Q Consensus 351 g~~~~--~~~~~-a~~~l~~g~~~VVVT~G~~----G---a~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g 420 (479)
|..-. ++... +.++++.|++.|+||-+.. + -+++.+++.+.+..+.....+..|.||.|.|+|++.|++|
T Consensus 135 g~~i~~~~~~~~~~~~l~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~GTGd~fss~laa~l~~g 214 (246)
T PF08543_consen 135 GREINSEEDIEEAAKALLALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRIPTGSFHGTGDLFSSALAAFLAKG 214 (246)
T ss_dssp TS--SSHHHHHHHHHHHHHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEECTSGCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCChHhHHHHHHHHHHhCCceEEEeeeccccccccccceeeeccceeecceeEEcCCCCCCchhHHHHHHHHHHHcC
Confidence 95422 22333 4556778999999998763 2 2344566666666555555789999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhc
Q 011689 421 VSDLKGMGALAARIAATVVG 440 (479)
Q Consensus 421 ~~~l~eAl~~A~a~Aa~~v~ 440 (479)
++ +++|++.|...-...+.
T Consensus 215 ~~-l~~Av~~A~~~v~~~i~ 233 (246)
T PF08543_consen 215 YS-LEEAVEKAKNFVRRAIK 233 (246)
T ss_dssp SS-HHHHHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHHHHHH
Confidence 98 99999999988877765
No 68
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional
Probab=99.34 E-value=1.7e-11 Score=137.26 Aligned_cols=159 Identities=13% Similarity=0.134 Sum_probs=114.6
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhc-CCEEEEeCCCh-----hhhhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRS-GALVAVTASDV-----TCIERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~-g~~v~~D~~~~-----~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
..+.+-+ |+.. +.+.+..+++.+++. +.++++||.-. .+.+....+.++.+++.+|+|+||..|++.|+
T Consensus 310 ~~~aiKi-GmL~----s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp~adlItPN~~Ea~~L~ 384 (755)
T PRK09517 310 TVDAVKL-GMLG----SADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAVHVDVVTPNIPELAVLC 384 (755)
T ss_pred CCCEEEE-CCCC----CHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhCcccCccCCHHHHHHHh
Confidence 3577777 5431 256666677777764 46799998521 11111112333458899999999999999999
Q ss_pred CCCCCC---cHHH-HHHHHhcCCCEEEEeecC------CCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcC
Q 011689 351 HFSSKE---SPES-TTRYLSHFVPLVSVTDGA------RGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRG 420 (479)
Q Consensus 351 g~~~~~---~~~~-a~~~l~~g~~~VVVT~G~------~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g 420 (479)
|..... +... +.++.+.+...||||.|. .++++..++..++++.++++++||+|+||+|+|+|++++++|
T Consensus 385 g~~~~~~~~d~~~aa~~L~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v~~~~t~GaGDtfsaaiaa~La~G 464 (755)
T PRK09517 385 GEAPAITMDEAIAQARGFARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRVNTTNSHGTGCSLSAALATLIAAG 464 (755)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeecccCCCCCcChHHHHHHHHHHHHHCC
Confidence 853212 2223 344555555689999983 466665556667888888999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHhcc
Q 011689 421 VSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 421 ~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
++ +++|+++|.+.-...+.+
T Consensus 465 ~s-l~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 465 ES-VEKALEWATRWLNEALRH 484 (755)
T ss_pred CC-HHHHHHHHHHHHHHHHHh
Confidence 98 999999999998888855
No 69
>PLN02978 pyridoxal kinase
Probab=99.33 E-value=6.1e-11 Score=119.53 Aligned_cols=160 Identities=16% Similarity=0.064 Sum_probs=108.6
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHh--cCCEEEEeCCChh----h-hhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHR--SGALVAVTASDVT----C-IERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~--~g~~v~~D~~~~~----~-~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
++.+.+ ||. ..+...+.+.++++.+++ .++.+++||.... + .+.....+.+.+++.+|+++||..|++.|+
T Consensus 87 ~~ai~~-G~l-~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll~~adiitPN~~Ea~~L~ 164 (308)
T PLN02978 87 YTHLLT-GYI-GSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVVPLATMLTPNQFEAEQLT 164 (308)
T ss_pred cCEEEe-ccc-CCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHHhhCCeeccCHHHHHHHh
Confidence 677766 663 233456778888888776 4577899997211 1 111112233458899999999999999999
Q ss_pred CCCCCC--cHHH-HHHHHhcCCCEEEEeecC-CCeEEEEC---------CeEEEeCCCCCCCCCccchhHHHHHHHHHHH
Q 011689 351 HFSSKE--SPES-TTRYLSHFVPLVSVTDGA-RGSYIGVK---------GEAVYIPPSPCVPVDTCGAGDAYASGILYGI 417 (479)
Q Consensus 351 g~~~~~--~~~~-a~~~l~~g~~~VVVT~G~-~Ga~~~~~---------~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l 417 (479)
|....+ +... +.++...|++.||||-+. +|.+++.. ++.+++..++++.. ++|+||+|+|.+++.+
T Consensus 165 g~~~~~~~~~~~a~~~l~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~GtGD~fsA~laa~l 243 (308)
T PLN02978 165 GIRIVTEEDAREACAILHAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKIPAY-FTGTGDLMAALLLGWS 243 (308)
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCCCCC-CCCchHHHHHHHHHHH
Confidence 864222 2233 345666789999998754 34432211 24556666666554 5899999999888888
Q ss_pred HcC-CChHHHHHHHHHHHHHHHhcc
Q 011689 418 LRG-VSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 418 ~~g-~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
.+| .+ +++|+++|...-...++.
T Consensus 244 ~~g~~~-l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 244 HKYPDN-LDKAAELAVSSLQAVLRR 267 (308)
T ss_pred hcCCcC-HHHHHHHHHHHHHHHHHH
Confidence 887 77 999999998888766655
No 70
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.
Probab=99.32 E-value=6.8e-11 Score=115.12 Aligned_cols=167 Identities=14% Similarity=0.089 Sum_probs=114.9
Q ss_pred hhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc--cCcEEEcCHHHH
Q 011689 269 PCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN--YADIVFANSDEA 346 (479)
Q Consensus 269 ~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea 346 (479)
+...+.++++|++++..- +..+...+.+..+++.+++.+.++++||........ ..+....++. .+|+|+||..|+
T Consensus 41 e~~~~~l~~~d~vvi~~G-~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~-~~~~~~~ll~~~~~~ilTPN~~Ea 118 (242)
T cd01170 41 EEVEELAKIAGALVINIG-TLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSF-RTEVAKELLAEGQPTVIRGNASEI 118 (242)
T ss_pred HHHHHHHHHcCcEEEeCC-CCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchh-HHHHHHHHHhcCCCeEEcCCHHHH
Confidence 445566788999999522 212223566677777788889999999864322111 1122233334 499999999999
Q ss_pred HHhhCCCC-----------CCcH-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHH
Q 011689 347 RAFCHFSS-----------KESP-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGIL 414 (479)
Q Consensus 347 ~~L~g~~~-----------~~~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl 414 (479)
..|+|... .++. +.+.++.+++...|++| |.... ++++++.++++..+..+.++.|+||+|+|++.
T Consensus 119 ~~L~g~~~~~~~~~~~~~~~~~~~~aa~~l~~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~~~~~v~GtGdtLa~aiA 196 (242)
T cd01170 119 AALAGLTGLGKGVDSSSSDEEDALELAKALARKYGAVVVVT-GEVDY-ITDGERVVVVKNGHPLLTKITGTGCLLGAVIA 196 (242)
T ss_pred HHHhCCCCCcCcccCCCcchHHHHHHHHHHHHHhCCEEEEE-CCCcE-EEECCEEEEEeCCCccccCCCchHHHHHHHHH
Confidence 99998642 1122 33455555666678888 66654 55677777887655555667899999999999
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHhc
Q 011689 415 YGILRGVSDLKGMGALAARIAATVVG 440 (479)
Q Consensus 415 ~~l~~g~~~l~eAl~~A~a~Aa~~v~ 440 (479)
+.+.+|.+ +.+|+..|...-+..+.
T Consensus 197 a~LA~g~~-~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 197 AFLAVGDD-PLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHhCCCC-HHHHHHHHHHHHHHHHH
Confidence 99999998 99999888766655553
No 71
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional
Probab=99.31 E-value=5.4e-11 Score=128.49 Aligned_cols=158 Identities=15% Similarity=0.104 Sum_probs=106.6
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCCh-----hhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDV-----TCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~-----~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
..+.+.+ |+.. .....+.+.++++.. .+.+|++||.-. .+......+.++.+++++|+|+||..|++.|+|
T Consensus 98 ~~~aiki-G~l~-s~~~i~~v~~~l~~~--~~~~vVlDPv~~~~~G~~l~~~~~~~~~~~Ll~~advItPN~~Ea~~Ltg 173 (530)
T PRK14713 98 TVDAVKI-GMLG-DAEVIDAVRTWLAEH--RPPVVVLDPVMVATSGDRLLEEDAEAALRELVPRADLITPNLPELAVLLG 173 (530)
T ss_pred CCCEEEE-CCcC-CHHHHHHHHHHHHhC--CCCCEEECCcccCCCCCCCCCHHHHHHHHHHhhhhheecCChHHHHHHhC
Confidence 3577777 5532 222344455555432 234689999621 111111223445688999999999999999998
Q ss_pred CCCC---CcHHH-HHHHHhcCCCEEEEeecCCC-----eEEEE-CCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC
Q 011689 352 FSSK---ESPES-TTRYLSHFVPLVSVTDGARG-----SYIGV-KGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV 421 (479)
Q Consensus 352 ~~~~---~~~~~-a~~~l~~g~~~VVVT~G~~G-----a~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 421 (479)
.... ++... +.++...+.+.||||.|..+ .+++. +++.++++.++++++|++|+||+|.|+|+++|++|+
T Consensus 174 ~~~~~~~~d~~~aa~~L~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v~~~~t~GaGD~fsaalaa~La~G~ 253 (530)
T PRK14713 174 EPPATTWEEALAQARRLAAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRVDTRNTHGTGCSLSSALATRLGRGG 253 (530)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeeeCCCCCCcHHHHHHHHHHHHHHCCC
Confidence 6421 12223 34454555678999988642 33443 445677888888899999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHh
Q 011689 422 SDLKGMGALAARIAATVV 439 (479)
Q Consensus 422 ~~l~eAl~~A~a~Aa~~v 439 (479)
+ +++|+++|.+.-...+
T Consensus 254 ~-l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 254 D-WAAALRWATAWLHGAI 270 (530)
T ss_pred C-HHHHHHHHHHHHHHHH
Confidence 8 9999999998554444
No 72
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=99.30 E-value=9.4e-11 Score=116.15 Aligned_cols=176 Identities=14% Similarity=0.096 Sum_probs=117.8
Q ss_pred hhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 273 NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
..+..++++++++.. +. ...+.++++.+++.+.++++|+....+.... ......+++|+||..|++.|+|.
T Consensus 88 ~~~~~~davvig~Gl---~~-~~~~~~l~~~~~~~~~pvVlDa~g~~l~~~~-----~~~~~~~~vItPN~~El~~L~g~ 158 (272)
T TIGR00196 88 ELLERYDVVVIGPGL---GQ-DPSFKKAVEEVLELDKPVVLDADALNLLTYD-----KPKREGEVILTPHPGEFKRLLGL 158 (272)
T ss_pred hhhccCCEEEEcCCC---CC-CHHHHHHHHHHHhcCCCEEEEhHHHHHHhhc-----ccccCCCEEECCCHHHHHHHhCC
Confidence 445788999997542 22 1237778888888899999998654332211 00124689999999999999986
Q ss_pred CCC--CcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHH
Q 011689 353 SSK--ESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGA 429 (479)
Q Consensus 353 ~~~--~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~ 429 (479)
... ++... +.++.+. ...+|++.|..++++..++..+.. ..+....+++|+||+++|.+.+.+.+|.+ +.+|+.
T Consensus 159 ~~~~~~~~~~aa~~l~~~-~~~vVv~kG~~~~i~~~~~~~~~~-~~~~~~~~~~GaGD~lag~iaa~la~g~~-~~~A~~ 235 (272)
T TIGR00196 159 VNEIQGDRLEAAQDIAQK-LQAVVVLKGAADVIAAPDGDLWIN-KTGNAALAKGGTGDVLAGLIGGLLAQNLD-PFDAAC 235 (272)
T ss_pred chhhhhhHHHHHHHHHHH-hCCEEEEcCCCCEEEcCCCeEEEE-CCCCCccCCCCchHHHHHHHHHHHhCCCC-HHHHHH
Confidence 421 22233 3444443 456888899999866544555544 44456788999999955555555558998 888986
Q ss_pred HH---HHHHHHHhccc-CCCCCCCCHHHHHHHHHccc
Q 011689 430 LA---ARIAATVVGQQ-GTRLSVRHASELAESFAYRI 462 (479)
Q Consensus 430 ~A---~a~Aa~~v~~~-G~~~~~p~~~el~~~l~~~~ 462 (479)
.| +..|+..+... |+.. -+..||.+.+.+.+
T Consensus 236 ~a~~~~~~a~~~~~~~~g~~~--~~~~dl~~~i~~~~ 270 (272)
T TIGR00196 236 NAAFAHGLAGDLALKNHGAYG--LTALDLIEKIPRVC 270 (272)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cCHHHHHHHHHHHH
Confidence 66 77777766444 5432 36678888776544
No 73
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]
Probab=99.27 E-value=1.2e-10 Score=112.78 Aligned_cols=157 Identities=17% Similarity=0.171 Sum_probs=119.3
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcC-CEEEEeCC-----Chh-hhhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSG-ALVAVTAS-----DVT-CIERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g-~~v~~D~~-----~~~-~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.+++=+ |.. .+.+.+..+.+..++.+ .++++||. +.. ..+.....+.+.++++++++.||..|++.|+
T Consensus 73 v~avKt-GML----~~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~ 147 (263)
T COG0351 73 VDAVKT-GML----GSAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALS 147 (263)
T ss_pred CCEEEE-CCc----CCHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHc
Confidence 455555 321 13677778888888888 77999996 111 2223334555688999999999999999999
Q ss_pred CC-C--CCCcHHHHHHHH-hcCCCEEEEeecCCC----eEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCC
Q 011689 351 HF-S--SKESPESTTRYL-SHFVPLVSVTDGARG----SYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVS 422 (479)
Q Consensus 351 g~-~--~~~~~~~a~~~l-~~g~~~VVVT~G~~G----a~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~ 422 (479)
|. . ..++.+++.+++ +.|++.|+||-|... -++|+++..+.+..+.+.-.+|.|+|++|.|++.+.|.+|.+
T Consensus 148 g~~~i~~~~d~~~a~~~i~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri~t~~tHGTGCTlSaAIaa~LA~G~~ 227 (263)
T COG0351 148 GLPKIKTEEDMKEAAKLLHELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRIPTKNTHGTGCTLSAAIAANLAKGLS 227 (263)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCceeEEEcCCceEEEeccccCCCCCCCccHHHHHHHHHHHHcCCC
Confidence 95 2 223344454544 679999999988644 245566667778888888889999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHhc
Q 011689 423 DLKGMGALAARIAATVVG 440 (479)
Q Consensus 423 ~l~eAl~~A~a~Aa~~v~ 440 (479)
+++|++.|-..-..+++
T Consensus 228 -l~~AV~~Ak~fv~~AI~ 244 (263)
T COG0351 228 -LEEAVKKAKEFVTRAIR 244 (263)
T ss_pred -HHHHHHHHHHHHHHHHh
Confidence 99999999999888887
No 74
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=99.10 E-value=2.1e-09 Score=104.73 Aligned_cols=163 Identities=18% Similarity=0.196 Sum_probs=112.9
Q ss_pred hccCCcEEEEeccccCCcchHHHHHHHHHHHHhcC--CEEEEeCCC--hh--hhhh-hhHHHHHHhcccCcEEEcCHHHH
Q 011689 274 LISKTNIFIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTASD--VT--CIER-HYDDFWEIVGNYADIVFANSDEA 346 (479)
Q Consensus 274 ~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g--~~v~~D~~~--~~--~~~~-~~~~~~~~ll~~~Dvl~~N~~Ea 346 (479)
.+.++|.|+. ||. ..+.+...+..+++..|+.+ ..+++||.- .. +... ........+++.+|++.||.-|+
T Consensus 70 ~~~~~davlt-GYl-gs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fEL 147 (281)
T COG2240 70 KLGECDAVLT-GYL-GSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFEL 147 (281)
T ss_pred cccccCEEEE-ccC-CCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHH
Confidence 5667898887 884 45556778888888888774 458899861 11 1111 12223336889999999999999
Q ss_pred HHhhCCCC--CCcHHHHH-HHHhcCCCEEEEeecC-----CCeEEEECCe---EEEeCCCCCCCCCccchhHHHHHHHHH
Q 011689 347 RAFCHFSS--KESPESTT-RYLSHFVPLVSVTDGA-----RGSYIGVKGE---AVYIPPSPCVPVDTCGAGDAYASGILY 415 (479)
Q Consensus 347 ~~L~g~~~--~~~~~~a~-~~l~~g~~~VVVT~G~-----~Ga~~~~~~~---~~~vpa~~v~vvDttGAGDaF~Agfl~ 415 (479)
+.|+|..- .+++.+|. .+.+.|+++|+||.=. .|.+++.... ..|+- +.+ ..+.+|.||.|+|.|++
T Consensus 148 e~Ltg~~~~~~~da~~aa~~L~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v-~~~~~GtGDL~sallla 225 (281)
T COG2240 148 EILTGKPLNTLDDAVKAARKLGADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLV-PFIPNGTGDLFSALLLA 225 (281)
T ss_pred HHHhCCCCCCHHHHHHHHHHHhhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcC-CCCCCCchHHHHHHHHH
Confidence 99999752 22333333 3556789999999532 3445544322 22332 222 24499999999999999
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 416 GILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 416 ~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
.+++|.+ +.+|+..+..+-...++.
T Consensus 226 ~lL~g~~-~~~al~~~~~~V~evl~~ 250 (281)
T COG2240 226 RLLEGLS-LTQALERATAAVYEVLQE 250 (281)
T ss_pred HHHcCCC-HHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999888777763
No 75
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=98.94 E-value=3.8e-08 Score=97.10 Aligned_cols=164 Identities=12% Similarity=0.070 Sum_probs=106.7
Q ss_pred hhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc--cCcEEEcCHHHHHH
Q 011689 271 LVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN--YADIVFANSDEARA 348 (479)
Q Consensus 271 ~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea~~ 348 (479)
..+.+..++.+++. ..+..+...+.+..+++.+++.+.++++||...... .++.+..+.+++ .++||+||..|+..
T Consensus 48 ~~~~~~~~~alvi~-~G~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~-~~~~~~~~~ll~~~~~~vItPN~~E~~~ 125 (263)
T PRK09355 48 AEEMAKIAGALVIN-IGTLTEERIEAMLAAGKIANEAGKPVVLDPVGVGAT-SYRTEFALELLAEVKPAVIRGNASEIAA 125 (263)
T ss_pred HHHHHHhcCceEEe-CCCCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcc-hhhHHHHHHHHHhcCCcEecCCHHHHHH
Confidence 44556778999984 222222224456677777888899999999754321 122333333333 68999999999999
Q ss_pred hhCCCC----------CCcHH-HHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHH
Q 011689 349 FCHFSS----------KESPE-STTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGI 417 (479)
Q Consensus 349 L~g~~~----------~~~~~-~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l 417 (479)
|++... .++.. .+.++.+++...|++|-+.+ ++++++..+.++.-.....+.+|+||++.|.+.+.+
T Consensus 126 L~g~~~~~~~vd~~~~~~~~~~~a~~la~~~~~~VvvkG~~d--~I~~~~~~~~~~~g~~~~~~v~GtGc~L~~~iaa~l 203 (263)
T PRK09355 126 LAGEAAETKGVDSTDGSADAVEIAKAAAKKYGTVVVVTGEVD--YITDGERVVSVHNGHPLMTKVTGTGCLLSAVVAAFA 203 (263)
T ss_pred HhCCCcccCCcCCCCCHHHHHHHHHHHHHHhCCEEEEECCCc--EEEeCCEEEEEeCCCcccCCcccccHHHHHHHHHHH
Confidence 998531 11222 34455566666788884432 444556666665333234556999999999999999
Q ss_pred HcCCChHHHHHHHHHHHHHHHh
Q 011689 418 LRGVSDLKGMGALAARIAATVV 439 (479)
Q Consensus 418 ~~g~~~l~eAl~~A~a~Aa~~v 439 (479)
..|.+ +.+|+..|...-+.+-
T Consensus 204 A~g~~-~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 204 AVEKD-YLEAAAAACAVYGIAG 224 (263)
T ss_pred hcCCC-HHHHHHHHHHHHHHHH
Confidence 99998 8888887776555443
No 76
>PTZ00493 phosphomethylpyrimidine kinase; Provisional
Probab=98.93 E-value=2.2e-08 Score=100.75 Aligned_cols=158 Identities=10% Similarity=0.069 Sum_probs=103.0
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhc------CCEEEEeCC-----Chhhhh--hhhHHHHHHhcccCcEEEcCHH
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRS------GALVAVTAS-----DVTCIE--RHYDDFWEIVGNYADIVFANSD 344 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~------g~~v~~D~~-----~~~~~~--~~~~~~~~~ll~~~Dvl~~N~~ 344 (479)
.+++=+. .. . +.+.+..+.+..++. ..++++||. +..+.. .....+.+.+++++++|.||..
T Consensus 74 i~aIKiG-mL-~---s~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~ 148 (321)
T PTZ00493 74 IDVVKLG-VL-Y---SKKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFY 148 (321)
T ss_pred CCEEEEC-Cc-C---CHHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHH
Confidence 5667773 32 1 234444444444433 224899996 111212 1223344668999999999999
Q ss_pred HHHHhhC-----CC-CCCcHHH-HHHHHh-cCCCEEEEeecCCC----------e--EEEEC---------------C--
Q 011689 345 EARAFCH-----FS-SKESPES-TTRYLS-HFVPLVSVTDGARG----------S--YIGVK---------------G-- 387 (479)
Q Consensus 345 Ea~~L~g-----~~-~~~~~~~-a~~~l~-~g~~~VVVT~G~~G----------a--~~~~~---------------~-- 387 (479)
|++.|++ .. ..++.+. |.++++ .|++.|+||-|... + +++.. +
T Consensus 149 Ea~~L~g~~~~~~~~~~~~~~~aA~~l~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~~~~~ 228 (321)
T PTZ00493 149 ECKVILEALDCQMDLSKANMTELCKLVTEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQIDAGGV 228 (321)
T ss_pred HHHHHhCCCcccCCCCHHHHHHHHHHHHHhcCCCEEEECcCCCcccccccccccceeEEecCCccccccccccccccccc
Confidence 9999987 22 1222334 445555 59999999977632 1 33321 1
Q ss_pred ----eEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcc
Q 011689 388 ----EAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 388 ----~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
..+.+...++...++.|+||+|++++++.|++|++ +++|++.|...-..++..
T Consensus 229 ~~~~~~~~~~~~ri~~~~~hGTGc~fASAIAa~LA~G~~-l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 229 TYLYDVYKLRSKRKPGKDIHGTGCTLSTAIACYLAKKHN-ILQSCIESKKYIYNCIRY 285 (321)
T ss_pred cccceEEEEEecccCCCCCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHHH
Confidence 12445555555677899999999999999999998 999999998887777765
No 77
>TIGR00694 thiM hydroxyethylthiazole kinase. This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE.
Probab=98.84 E-value=1.1e-07 Score=93.06 Aligned_cols=163 Identities=11% Similarity=0.040 Sum_probs=103.1
Q ss_pred hhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc--cCcEEEcCHHHHHH
Q 011689 271 LVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN--YADIVFANSDEARA 348 (479)
Q Consensus 271 ~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea~~ 348 (479)
..+.+..++.+++.--.+ .+...+.+..+++.+++.+.++++||....... .+.+..+.+++ .+++|+||..|+..
T Consensus 43 ~~~~~~~~~al~ik~G~l-~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s~-~r~~~~~~Ll~~~~~~vITpN~~E~~~ 120 (249)
T TIGR00694 43 VAELAKIAGALVINIGTL-DKESIEAMIAAGKSANELGVPVVLDPVGVGATK-FRTETALELLSEGRFAAIRGNAGEIAS 120 (249)
T ss_pred HHHHHHHcCceEEeCCCC-CHHHHHHHHHHHHHHHhcCCCEEEcccccccch-hHHHHHHHHHhhcCCceeCCCHHHHHH
Confidence 345566788888862222 222356677778888888999999997543221 12222334444 47999999999999
Q ss_pred hhCCC-------C---CCcH-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHH
Q 011689 349 FCHFS-------S---KESP-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGI 417 (479)
Q Consensus 349 L~g~~-------~---~~~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l 417 (479)
|++.. . .++. +.++++.+++...|++|-+ .- +++++++.+.+..-+...-..+|.||++.+.+.+.+
T Consensus 121 L~g~~~~~~gvd~~~~~~d~~~~a~~la~~~~~~VllkG~-~D-~i~~~~~~~~~~~g~~~~~~~~GtGc~LssaIaa~L 198 (249)
T TIGR00694 121 LAGETGLMKGVDSGEGAADAIRAAQQAAQKYGTVVVITGE-VD-YVSDGTSVYTIHNGTELLGKITGSGCLLGSVVAAFC 198 (249)
T ss_pred HhCCCCCCCCcCCccchHHHHHHHHHHHHHhCCEEEEECC-Cc-EEEeCCEEEEECCCChHHhCCccchHHHHHHHHHHH
Confidence 99853 1 1122 2344455555557777644 32 455656655544322111224799999999999999
Q ss_pred HcCCChHHHHHHHHHHHHHHH
Q 011689 418 LRGVSDLKGMGALAARIAATV 438 (479)
Q Consensus 418 ~~g~~~l~eAl~~A~a~Aa~~ 438 (479)
.+|.+ +.+|+..|...-..+
T Consensus 199 A~g~~-~~~A~~~A~~~~~~a 218 (249)
T TIGR00694 199 AVEED-PLDAAISACLLYKIA 218 (249)
T ss_pred hcCCC-HHHHHHHHHHHHHHH
Confidence 99998 888888887444333
No 78
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]
Probab=98.34 E-value=6.7e-06 Score=78.93 Aligned_cols=159 Identities=14% Similarity=0.124 Sum_probs=95.0
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcC--CEEEEeCCC----hhhhhh-hhHHHHHHhcccCcEEEcCHHHHH
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTASD----VTCIER-HYDDFWEIVGNYADIVFANSDEAR 347 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g--~~v~~D~~~----~~~~~~-~~~~~~~~ll~~~Dvl~~N~~Ea~ 347 (479)
+...+++.. ||..... ..+.+..+++..|+.+ ...++||.- .-+.++ ..+-..+.+.+.+|+|.||.-|++
T Consensus 79 ~~~Y~~vLT-GY~~n~~-~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~E 156 (308)
T KOG2599|consen 79 LNKYDAVLT-GYLPNVS-FLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAE 156 (308)
T ss_pred ccccceeee-eccCChh-HHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhh
Confidence 345676655 8864322 3556666666666554 566788861 111111 222233445678999999999999
Q ss_pred HhhCCC--CCCcHHHHHHH-HhcCCCEEEEeecCC----CeEEE----E-CCeEEEeCCCCCCCCCccchhHHHHHHHHH
Q 011689 348 AFCHFS--SKESPESTTRY-LSHFVPLVSVTDGAR----GSYIG----V-KGEAVYIPPSPCVPVDTCGAGDAYASGILY 415 (479)
Q Consensus 348 ~L~g~~--~~~~~~~a~~~-l~~g~~~VVVT~G~~----Ga~~~----~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 415 (479)
.|+|.. ..++..+|.+. .+++++.||||...- |..++ . +.+.+.+.-+++.. --||.||.|.|-+++
T Consensus 157 iLtg~~I~t~eda~~a~~~lhq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki~~-~FtGTGDLfsaLLla 235 (308)
T KOG2599|consen 157 ILTGMEIRTEEDAKRAVEKLHQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKIDG-VFTGTGDLFSALLLA 235 (308)
T ss_pred hhcCCeeccHHHHHHHHHHHHHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEecccce-EEecccHHHHHHHHH
Confidence 999975 33344445444 456899999996432 42222 1 23344443333332 247999999998888
Q ss_pred HHHcCC--ChHHHHHHHHHHHHH
Q 011689 416 GILRGV--SDLKGMGALAARIAA 436 (479)
Q Consensus 416 ~l~~g~--~~l~eAl~~A~a~Aa 436 (479)
.+.+-. +++..+++.+...--
T Consensus 236 ~~~~~~~~~~l~~a~e~~ls~~~ 258 (308)
T KOG2599|consen 236 WLHESPDNDDLSKAVEQVLSSVQ 258 (308)
T ss_pred HHhcCCCcchHHHHHHHHHHHHH
Confidence 887653 337777666555443
No 79
>PRK14039 ADP-dependent glucokinase; Provisional
Probab=98.01 E-value=0.0011 Score=69.50 Aligned_cols=168 Identities=12% Similarity=0.162 Sum_probs=92.2
Q ss_pred CceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeee-------------eCCCC
Q 011689 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEP-------------IKDGT 239 (479)
Q Consensus 173 ~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~-------------~~~~~ 239 (479)
....+.||.+..+|-.++++|. ++.+ ..++. .++..++.|...+|-.-.+. ....+
T Consensus 85 ~~~~rmGGnAgimAn~la~lg~--------~~Vi-~~~~~--lsk~q~~lf~~~~i~~p~~~~~~~l~~~~~~~a~~~~~ 153 (453)
T PRK14039 85 NSEIRMGGNAGIMANVLSELGA--------SRVV-PNVAV--PSKTQLSLFSKKAVYFPGMPLQASETDGEKVGASSSDQ 153 (453)
T ss_pred CceEEeCChHHHHHHHHHhcCC--------ceEE-EcCCC--CCHHHHHhcCCCCEEeccccccccccCccccccccCCC
Confidence 4578999999999999999999 4322 11111 23344455522222211100 00112
Q ss_pred ceEEEEEECCCC---------------CeEEEEecCCCCCCCCChhhhhhc----cCCcEEEEeccccCCc---c---hH
Q 011689 240 TGTVIVLTTPDA---------------QRAMLAYQGTSSTINYDPCLVNLI----SKTNIFIVEGYLFELP---D---TI 294 (479)
Q Consensus 240 T~~~~v~~~~~G---------------~rt~~~~~ga~~~l~~~~~~~~~l----~~ad~v~i~g~~~~~~---~---~~ 294 (479)
.-.-+++-.+.| .|-++.++..+..+...+...+.+ .++|.++++|+.+-.. . ..
T Consensus 154 d~IH~IfEy~~G~~~~l~~~~~~aPRaNRfI~s~D~~N~~l~i~e~f~~~l~e~~~~~D~avlSG~q~l~d~y~dg~~~~ 233 (453)
T PRK14039 154 EPIHFVFDFREGETFSLYGTRIRAPRENRFIATFDHLNFRLFINPAFEQYALEHAGEMDGALISGFHLLLETYPDGSTYR 233 (453)
T ss_pred CCceEEEEeCCCCEEecCCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhhhcCCcccHH
Confidence 222333322333 344444444444443333333333 3789999999864311 0 12
Q ss_pred HHHHHHHHHHH-----hcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 295 RTITKACEVAH-----RSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 295 ~~~~~~l~~ak-----~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
+.+.++.+..+ ..+.++-+...... .......+++.+++.+|.+-+|++|+..+...
T Consensus 234 e~l~~~~~~i~~l~~~~~~i~iH~E~As~~-~~~i~~~v~~~Ilp~VDSlGmNEqELa~l~~~ 295 (453)
T PRK14039 234 EKLEDSLAQLKWWKSKNEKLRIHAELGHFA-SKEIANSVFLILAGIVDSIGMNEDELAMLANL 295 (453)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEecCcc-cHHHHHHHHHHhhcccccccCCHHHHHHHHHH
Confidence 33333333322 24578888776432 23455677778999999999999999988765
No 80
>PRK03979 ADP-specific phosphofructokinase; Provisional
Probab=97.97 E-value=0.0011 Score=69.57 Aligned_cols=215 Identities=13% Similarity=0.042 Sum_probs=114.0
Q ss_pred ccEEEEcCceeeeeeccChHHHHh----------------hc------------------cCCCCccccccchhhhhhhh
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLER----------------LG------------------LEKGTRKLVNHEERGRVLRA 168 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~----------------~~------------------~~~g~~~l~~~~~~~~~~~~ 168 (479)
..|+|-=|.+||-+.++..+.+++ +| -..+.++.+..++..+.++.
T Consensus 13 ~~~~~aYN~NiDai~~l~~~~l~~li~~~~~~~v~~~~e~~p~~I~s~~Dl~~~l~~~mk~G~aaE~~v~n~~l~~~~~~ 92 (463)
T PRK03979 13 VSIFTAYNSNVDAIKYLNDEDIQKLIEEFNEEEIIERIEEYPREINEPLDFVARLIHAMKTGKPAEVPLKNEELHEWFDE 92 (463)
T ss_pred CceEEEeecchhheeecCHHHHHHHHHHhChHHHHHHhhcCCcccCCHHHHHHHHHHHHhCCCceEeeecCHHHHHHHHH
Confidence 357788888888887776544332 11 12233333333333333332
Q ss_pred ccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE-EEEEEeCCCchHHHHHHHHHh-cCCCce------eee------
Q 011689 169 MDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV-AMTGSVGSDPLGGFYRAKLRR-ANVAFC------SEP------ 234 (479)
Q Consensus 169 ~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v-~~ig~VG~D~~G~~i~~~L~~-~GVd~~------~v~------ 234 (479)
.+ ..-..+.||.+..+|-.++++|.. +| .+...++ +...+.|.. .+|-.- .+.
T Consensus 93 ~~-~~~~~rmGGqAgimAn~la~lg~~-------~vV~~~p~ls-----k~qa~lf~~~~~i~~P~~e~g~l~l~~p~e~ 159 (463)
T PRK03979 93 HL-KYDEERMGGQAGIISNLLAILDLK-------KVIAYTPWLS-----KKQAEMFVDSDNLLYPVVENGKLVLKKPREA 159 (463)
T ss_pred hc-ccceEEeCChHHHHHHHHHhcCCc-------eEEEeCCCCC-----HHHHHHhCCCCCeeeccccCCceeeccchhh
Confidence 11 223458999999999999999993 23 3333343 334455522 122111 000
Q ss_pred e-CCCCceEEEEEECCCCC---------------eEEEEecCCCCCCCCChhhhhhcc----CCcEEEEeccccCCc---
Q 011689 235 I-KDGTTGTVIVLTTPDAQ---------------RAMLAYQGTSSTINYDPCLVNLIS----KTNIFIVEGYLFELP--- 291 (479)
Q Consensus 235 ~-~~~~T~~~~v~~~~~G~---------------rt~~~~~ga~~~l~~~~~~~~~l~----~ad~v~i~g~~~~~~--- 291 (479)
. ++.++-..+++-.+.|. |-++..+..+..+...+...+.+. .+|.++++|+.+-..
T Consensus 160 ~~~~d~~~IH~I~Ey~~G~~~~l~~~~~~aPRaNRfI~s~D~~n~~l~~~eef~~~L~ei~~~~D~avlSG~q~i~~~y~ 239 (463)
T PRK03979 160 YKPNDPLKINRIFEFKKGLEFKLGGEKIIVPRSNRFIVSSRPEWLRIEIKDELKEFLPEIGKMVDGAILSGYQGIKEEYS 239 (463)
T ss_pred ccCCCCcceEEEEEeCCCCEEEecCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhcccc
Confidence 0 11122233333333333 333333333333333333333343 599999999864222
Q ss_pred --ch----HHHHHHHHHHH--HhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 292 --DT----IRTITKACEVA--HRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 292 --~~----~~~~~~~l~~a--k~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
.. .+.+.+.++.. +..++++-|...... .......+++.+++.+|.+-+|++|+..++.
T Consensus 240 dg~~~~~~l~r~~~~i~~L~~~~~~i~iH~E~As~~-~~~ir~~i~~~ilp~vDSlGmNE~ELa~l~~ 306 (463)
T PRK03979 240 DGKTAEYYLKRAKEDIKLLKKKNKDIKIHVEFASIQ-NREIRKKIITYILPHVDSVGMDETEIANILN 306 (463)
T ss_pred ccccHHHHHHHHHHHHHHHhhCCCCceEEEEecccc-CHHHHHHHHHhhccccccccCCHHHHHHHHH
Confidence 11 22233333333 234678888776432 2245567777889999999999999997653
No 81
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []. Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....
Probab=97.91 E-value=0.00063 Score=66.06 Aligned_cols=154 Identities=16% Similarity=0.155 Sum_probs=93.2
Q ss_pred hhhccCCcEEEEeccccCCcc--hHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhc--ccCcEEEcCHHHHH
Q 011689 272 VNLISKTNIFIVEGYLFELPD--TIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVG--NYADIVFANSDEAR 347 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~--~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll--~~~Dvl~~N~~Ea~ 347 (479)
.+..+-++.++++ +..+. ..+.+..+++.+++.++++++||..... ..++.+....++ .+.++|+.|..|..
T Consensus 44 ~e~~~~a~al~iN---iGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGa-s~~R~~~~~~LL~~~~~~vIrGN~sEI~ 119 (246)
T PF02110_consen 44 EEFASIADALVIN---IGTLTDERIEAMKKAAKAANELGIPVVLDPVGVGA-SKFRTEFALELLNNYKPTVIRGNASEIA 119 (246)
T ss_dssp HHHHHCTSEEEEE---STTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTT-BHHHHHHHHHHHCHS--SEEEEEHHHHH
T ss_pred HHHHHHcCEEEEE---CCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCC-cHHHHHHHHHHHHhCCCcEEEeCHHHHH
Confidence 4455678889997 44433 3688889999999999999999986543 344555555665 57899999999999
Q ss_pred HhhCCCC-------CC-c--H-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHH
Q 011689 348 AFCHFSS-------KE-S--P-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYG 416 (479)
Q Consensus 348 ~L~g~~~-------~~-~--~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 416 (479)
.|.+... .+ . . +.++++-++.. .+|+-.|+.-.+ .++.+.+.++.-..-.-.-||+|++..+-+.+.
T Consensus 120 aLag~~~~~kGVDs~~~~~~~~~~a~~lA~k~~-~vVvvTG~~D~I-sdg~~~~~i~nG~~~l~~itGtGC~lgaliaaf 197 (246)
T PF02110_consen 120 ALAGEDSKAKGVDSGDSDEDAIEAAKQLAQKYN-CVVVVTGEVDYI-SDGNRVYRIPNGSPLLSKITGTGCMLGALIAAF 197 (246)
T ss_dssp HHHTCCCCSCSSSSSCGSHHHHHHHHHHHHHTT-SEEEEESSSEEE-EESSCEEEECSSSGGGGGSTTHHHHHHHHHHHH
T ss_pred HHhCcCCCCCCcCcCCcchHHHHHHHHHHHhcC-CEEEEecCCcEE-ECCCeEEEeCCCChHhcceeccchHHHHHHHHH
Confidence 9988641 11 1 1 22333334443 444545665544 355666666654433445689999876655555
Q ss_pred HHcCCChHHHHHHHHH
Q 011689 417 ILRGVSDLKGMGALAA 432 (479)
Q Consensus 417 l~~g~~~l~eAl~~A~ 432 (479)
+....+.+..| ..|.
T Consensus 198 ~av~~d~~~aa-~~a~ 212 (246)
T PF02110_consen 198 LAVAEDPLEAA-VAAV 212 (246)
T ss_dssp HCCCSSHHHHH-HHHH
T ss_pred HhccccchHHH-HHHH
Confidence 54545534433 4443
No 82
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase. Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases.
Probab=97.85 E-value=0.0019 Score=67.60 Aligned_cols=162 Identities=14% Similarity=0.064 Sum_probs=89.9
Q ss_pred eecCchHHHHHHHHHHhCCCCCCCCCccEE-EEEEeCCCchHHHHHHHHHhc-CCCcee------ee------e-CCCCc
Q 011689 176 AAAGGSLSNSLVALARLGGKPIGGPALNVA-MTGSVGSDPLGGFYRAKLRRA-NVAFCS------EP------I-KDGTT 240 (479)
Q Consensus 176 ~~~GG~a~NvA~ala~LG~~~~~~~~~~v~-~ig~VG~D~~G~~i~~~L~~~-GVd~~~------v~------~-~~~~T 240 (479)
.+.||.+..+|..++++|.. .+. +.+.++ +...+.|.+. +|-.-. +. . .+.++
T Consensus 86 ~rmGGqAgimAn~la~lg~~-------~vI~~~~~ls-----~~qa~lf~~~~ni~~p~~e~g~l~l~~~~e~~~e~d~~ 153 (446)
T TIGR02045 86 ERMGGQAGIISNLLGRLGLK-------KVIAYTPFLS-----KRQAEMFVATGNILYPVVENGKLVLKPPGEAYREGDPS 153 (446)
T ss_pred eeeCCHHHHHHHHHHhcCCc-------eEEEeCCCCC-----HHHHHHhCCcCceeeccccCCceeeccchhccCCCCCC
Confidence 57999999999999999993 233 333333 3444555443 121110 00 0 11122
Q ss_pred eEEEEEECCCCC---------------eEEEEecCCCCCCCCCh----hhhhhccCCcEEEEeccccCCcc---------
Q 011689 241 GTVIVLTTPDAQ---------------RAMLAYQGTSSTINYDP----CLVNLISKTNIFIVEGYLFELPD--------- 292 (479)
Q Consensus 241 ~~~~v~~~~~G~---------------rt~~~~~ga~~~l~~~~----~~~~~l~~ad~v~i~g~~~~~~~--------- 292 (479)
-.-+++-.+.|. |-++..+..+..+...+ ...+.-..+|.++++|+.+-...
T Consensus 154 ~IH~I~Ey~~G~~~~lg~~~~~aPRaNRfI~s~D~~n~~l~~~~~l~~~~~~i~~~~d~~vlSG~q~m~~~y~dg~~~~~ 233 (446)
T TIGR02045 154 KVNRIFEFRKGTNFKLGGETIKVPRSGRFIVSSRPESLRIETKDQLRKFLPEIGEPVDGAILSGYQGIKEEYSDGKTAKY 233 (446)
T ss_pred ceEEEEEeCCCCeeecCCceEeccCCCeEEEecCCccccceecHHHHHhhhhhhhcccEEEEEchhhhhhhccCCccHhH
Confidence 233333333343 33333333333332222 22333456999999998643211
Q ss_pred hHHHHHHHHHHHH-hcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 293 TIRTITKACEVAH-RSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 293 ~~~~~~~~l~~ak-~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
..+...+.++..+ ..+.++-|...... ...+...+++.+++.+|.+-+|++|+..+.
T Consensus 234 ~~er~~~~i~~L~~~~~i~iH~E~As~~-~~~l~~~i~~~ilp~vDSlGMNE~ELa~ll 291 (446)
T TIGR02045 234 YLERAKEDIELLKKNKDLKIHVEFASIQ-NREIRKKVVTNIFPHVDSVGMDEAEIANVL 291 (446)
T ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccc-cHHHHHHHHHhhccccccccCCHHHHHHHH
Confidence 1233344444443 36788888776432 224556677788999999999999999876
No 83
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription]
Probab=97.76 E-value=0.0006 Score=69.72 Aligned_cols=159 Identities=19% Similarity=0.100 Sum_probs=105.6
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCC-----hh-hhhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASD-----VT-CIERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~-----~~-~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.++++-. |.. ..+.....+.+.++. .+-.++++||.- .. .-...-.-+.+.+++.+||+.+|..|+-.|+
T Consensus 92 ~C~VvKT-GML-~~~~I~~vi~q~l~~--~~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll 167 (523)
T KOG2598|consen 92 KCDVVKT-GML-PSPEIVKVIEQSLQK--FNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILL 167 (523)
T ss_pred cccEEee-cCc-CchHHHHHHHHHHHh--hcCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHH
Confidence 3666665 432 223223444444443 334568888851 11 1112234456788999999999999999998
Q ss_pred CCCC-----CCcHHH----HHHHHhcCCCEEEEeecCCC----------------e-EEEECCeEEEeCCCCCCCCCccc
Q 011689 351 HFSS-----KESPES----TTRYLSHFVPLVSVTDGARG----------------S-YIGVKGEAVYIPPSPCVPVDTCG 404 (479)
Q Consensus 351 g~~~-----~~~~~~----a~~~l~~g~~~VVVT~G~~G----------------a-~~~~~~~~~~vpa~~v~vvDttG 404 (479)
+... ..+... +.++.+.|++.|+|+-|.-. + ++|.+.+.+..+.+-+....+.|
T Consensus 168 ~~~~~~~~~i~~v~di~~~~~~ihk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~~t~~tHG 247 (523)
T KOG2598|consen 168 KKEKREISKIQSVFDIAKDAAKIHKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYLATKHTHG 247 (523)
T ss_pred hhcccCCcccccHHHHHHHHHHHHhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEecccccccccccC
Confidence 8421 122222 33455679999999977422 1 24455567777877788889999
Q ss_pred hhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhc
Q 011689 405 AGDAYASGILYGILRGVSDLKGMGALAARIAATVVG 440 (479)
Q Consensus 405 AGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~ 440 (479)
.|-+.+++++.-|++|++ +.+|+..|...--.+++
T Consensus 248 tgCtLaSAIASnLA~g~s-l~qAv~~ai~yvq~Ai~ 282 (523)
T KOG2598|consen 248 TGCTLASAIASNLARGYS-LLQAVQGAIEYVQNAIA 282 (523)
T ss_pred ccchHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHH
Confidence 999999999999999998 99999888776655544
No 84
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase. Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A ....
Probab=97.62 E-value=0.0028 Score=61.74 Aligned_cols=151 Identities=17% Similarity=0.150 Sum_probs=91.3
Q ss_pred hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
.+.++++|.+.+.. .+... +...++++...+...++++|....+...... ......-|++|+.-|+..|++
T Consensus 62 ~~~~~~~~av~iGP-Glg~~---~~~~~~~~~~~~~~~p~VlDADaL~~l~~~~-----~~~~~~~IlTPH~gE~~rL~~ 132 (242)
T PF01256_consen 62 LELLEKADAVVIGP-GLGRD---EETEELLEELLESDKPLVLDADALNLLAENP-----KKRNAPVILTPHPGEFARLLG 132 (242)
T ss_dssp HHHHCH-SEEEE-T-T-SSS---HHHHHHHHHHHHHCSTEEEECHHHHCHHHCC-----CCSSSCEEEE-BHHHHHHHHT
T ss_pred HhhhccCCEEEeec-CCCCc---hhhHHHHHHHHhhcceEEEehHHHHHHHhcc-----ccCCCCEEECCCHHHHHHHhC
Confidence 34567899999962 23222 2233355555555677999976544332211 123456799999999999999
Q ss_pred CCC--CCcH-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHH
Q 011689 352 FSS--KESP-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMG 428 (479)
Q Consensus 352 ~~~--~~~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl 428 (479)
... .++. +.++++-++. ..+||-.|..-.++..+++.+..+.-. .-.-+-|.||.+++-+..-+.++.+ +.+|+
T Consensus 133 ~~~~~~~~~~~~a~~~a~~~-~~~vvLKG~~t~I~~p~~~~~~n~~gn-~~la~gGsGDvLaGii~~llaq~~~-~~~Aa 209 (242)
T PF01256_consen 133 KSVEIQEDRIEAAREFAKEY-GAVVVLKGAVTIIASPGGRVYVNPTGN-PGLATGGSGDVLAGIIAGLLAQGYD-PFEAA 209 (242)
T ss_dssp TTCHHCCSHHHHHHHHHHHH-TSEEEEESTSSEEEEETSEEEEE-----GGGSSTTHHHHHHHHHHHHHHHTSS-HHHHH
T ss_pred CcccchhhHHHHHHHHHhhc-CcEEEEeCCCcEEEecCcceeEeCCCC-CCCCCCCcccHHHHHHHHHHHccCC-HHHHH
Confidence 764 2233 3344444433 345566676666555577766665443 3467789999998877777789998 77777
Q ss_pred HHHHHH
Q 011689 429 ALAARI 434 (479)
Q Consensus 429 ~~A~a~ 434 (479)
..|+..
T Consensus 210 ~~av~l 215 (242)
T PF01256_consen 210 CLAVYL 215 (242)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 85
>PRK10565 putative carbohydrate kinase; Provisional
Probab=97.61 E-value=0.0022 Score=69.09 Aligned_cols=146 Identities=14% Similarity=0.082 Sum_probs=88.6
Q ss_pred hccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC
Q 011689 274 LISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFS 353 (479)
Q Consensus 274 ~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~ 353 (479)
.++.++.+++. +.+... +...++++.+++.+.++++|+...++..... . .....||+||.-|+..|++..
T Consensus 317 ~~~~~~a~viG---pGlg~~-~~~~~~~~~~~~~~~P~VLDAdaL~ll~~~~-~-----~~~~~VLTPh~gE~~rL~~~~ 386 (508)
T PRK10565 317 SLEWADVVVIG---PGLGQQ-EWGKKALQKVENFRKPMLWDADALNLLAINP-D-----KRHNRVITPHPGEAARLLGCS 386 (508)
T ss_pred HhhcCCEEEEe---CCCCCC-HHHHHHHHHHHhcCCCEEEEchHHHHHhhCc-c-----ccCCeEECCCHHHHHHHhCCC
Confidence 34678999996 333322 2234555667777899999987654432211 0 112579999999999999843
Q ss_pred CCC----cHHHHHHHHhcCCCEEEEeecCCCeEEEEC-CeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHH
Q 011689 354 SKE----SPESTTRYLSHFVPLVSVTDGARGSYIGVK-GEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMG 428 (479)
Q Consensus 354 ~~~----~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl 428 (479)
..+ ..+.+.++.++....||+ .|..- ++.+. +..+..+. -....-++|.||+++|.+.+-+.++.+ +.+|+
T Consensus 387 ~~~v~~~~~~~a~~~a~~~~~~vvl-KG~~~-iI~~~~~~~~~~~~-G~~~ma~~GsGDvLaGiIaalla~g~~-~~~Aa 462 (508)
T PRK10565 387 VAEIESDRLLSARRLVKRYGGVVVL-KGAGT-VIAAEPDALAIIDV-GNAGMASGGMGDVLSGIIGALLGQKLS-PYDAA 462 (508)
T ss_pred hhhhhhhHHHHHHHHHHHhCCEEEE-eCCCc-EEEcCCceEEEECC-CCCCCCCCChHHHHHHHHHHHHHcCCC-HHHHH
Confidence 211 122334444444445555 45433 44453 44444432 223455699999998887777788987 66776
Q ss_pred HHHHH
Q 011689 429 ALAAR 433 (479)
Q Consensus 429 ~~A~a 433 (479)
..|+.
T Consensus 463 ~~a~~ 467 (508)
T PRK10565 463 CAGCV 467 (508)
T ss_pred HHHHH
Confidence 66663
No 86
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]
Probab=97.51 E-value=0.0058 Score=59.10 Aligned_cols=148 Identities=12% Similarity=0.071 Sum_probs=88.1
Q ss_pred hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc--cCcEEEcCHHHHHHh
Q 011689 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN--YADIVFANSDEARAF 349 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea~~L 349 (479)
.+..+-++.++++--.+. ....+.+..+++.+++.+.++++||...... .++.++...++. +.++|+.|.-|...|
T Consensus 50 ~e~~kia~AL~INIGTL~-~~~~~~m~~A~~~An~~~~PvvLDPVgvgAt-~~R~~~~~~LL~~~~~~~IrGN~sEI~~L 127 (265)
T COG2145 50 EEFAKIADALLINIGTLS-AERIQAMRAAIKAANESGKPVVLDPVGVGAT-KFRTKFALELLAEVKPAAIRGNASEIAAL 127 (265)
T ss_pred HHHHHhccceEEeeccCC-hHHHHHHHHHHHHHHhcCCCEEecCccCCch-HHHHHHHHHHHHhcCCcEEeccHHHHHHH
Confidence 344556777777632222 2347889999999999999999999864421 233444444443 479999999999999
Q ss_pred hCCC----CCC------cHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc
Q 011689 350 CHFS----SKE------SPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR 419 (479)
Q Consensus 350 ~g~~----~~~------~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 419 (479)
.|.. +.| ++..+.+.+.+....+++-.|+.-++ .++.+.+.+..-.--.-.-||+|+...|-..+-+..
T Consensus 128 ag~~~~~kGVDa~~~~~~~~~~a~~~A~~~~~vvvvTG~vD~I-sdg~~~~~i~nG~pll~~ItGtGCllgav~aaF~av 206 (265)
T COG2145 128 AGEAGGGKGVDAGDGAADAIEAAKKAAQKYGTVVVVTGEVDYI-SDGTRVVVIHNGSPLLGKITGTGCLLGAVVAAFLAV 206 (265)
T ss_pred hcccccccccccccchhhHHHHHHHHHHHhCcEEEEECCeeEE-EcCCeEEEEECCCcHHhhhhccccHHHHHHHHHHhc
Confidence 8643 111 12223333333333555555665543 244455554433222345689998766655555555
Q ss_pred CCC
Q 011689 420 GVS 422 (479)
Q Consensus 420 g~~ 422 (479)
..+
T Consensus 207 ~~d 209 (265)
T COG2145 207 EKD 209 (265)
T ss_pred CCC
Confidence 554
No 87
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=97.19 E-value=0.006 Score=58.76 Aligned_cols=171 Identities=15% Similarity=0.143 Sum_probs=105.6
Q ss_pred hhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHH
Q 011689 269 PCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARA 348 (479)
Q Consensus 269 ~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~ 348 (479)
+..+..+..-.++++..-.-..|.....+.++++.++.+++++++|..+.++..+....++... ..-|+.||..|+..
T Consensus 93 ~~i~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~~e~l~~~~--~~viLTPNvvEFkR 170 (306)
T KOG3974|consen 93 DIIEKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQLPERLIGGY--PKVILTPNVVEFKR 170 (306)
T ss_pred hHHHHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhchhhhhccC--ceeeeCCcHHHHHH
Confidence 4455578889999996433233445678889999999999999999987776654433222211 23588999999999
Q ss_pred hhCC--CCCCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc----CCC
Q 011689 349 FCHF--SSKESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR----GVS 422 (479)
Q Consensus 349 L~g~--~~~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~----g~~ 422 (479)
|++. ...+...++..+...-....||-.|+.-.++..+++....+. +--..-.=|=||..++.+..-+.. ..+
T Consensus 171 Lcd~~l~~~d~~~~~~~L~~~l~nv~vvqKG~~D~ils~~~ev~~~s~-eGs~kRcGGQGDiLaGsla~fl~w~k~~~~e 249 (306)
T KOG3974|consen 171 LCDAELDKVDSHSQMQHLAAELMNVTVVQKGESDKILSPDSEVRVCST-EGSLKRCGGQGDILAGSLATFLSWAKLLSGE 249 (306)
T ss_pred HHHHhhccccchHHHHHHHHHhcCeEEEEecCCceeeCCCCeeEEccC-CCCccccCCCcchhhhHHHHHHHHHHhccCC
Confidence 9986 233333444455444455677777877775545555443332 222334457799988776544321 222
Q ss_pred hHHHHHHHHHHHHHHHhcccC
Q 011689 423 DLKGMGALAARIAATVVGQQG 443 (479)
Q Consensus 423 ~l~eAl~~A~a~Aa~~v~~~G 443 (479)
..++...|..+++..+..-|
T Consensus 250 -~~~~~~~a~~a~s~~vr~a~ 269 (306)
T KOG3974|consen 250 -QDSAAFLAAVAGSIMVRRAG 269 (306)
T ss_pred -ccchhhhhhhhhHHHHHHHH
Confidence 33555556555555554443
No 88
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]. ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.
Probab=96.55 E-value=0.017 Score=61.27 Aligned_cols=162 Identities=12% Similarity=0.110 Sum_probs=83.0
Q ss_pred ecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceee--------e-----eCCCCceEE
Q 011689 177 AAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSE--------P-----IKDGTTGTV 243 (479)
Q Consensus 177 ~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v--------~-----~~~~~T~~~ 243 (479)
..||.+.-+|..|+.++.. +|.+.+.++. +.+.+.| ..+|-.-.+ . ..+.+.-.-
T Consensus 93 r~GGnA~imAn~la~l~~~-------~Vil~~p~~s----k~~~~l~-~~~i~~P~v~~~~~~l~~~~~a~~~~~~~~iH 160 (444)
T PF04587_consen 93 RMGGNAGIMANRLANLEGC-------PVILYAPILS----KEQAELF-NDNIYVPVVENGELKLIHPREAFKEDDEDDIH 160 (444)
T ss_dssp EEESHHHHHHHHHCCTT-S-------EEEEE-SS------HHHHTTS-SSSEEEEEEETTEEEEEEGGGS-STT----EE
T ss_pred ccCchHHHHHHHHHhCCCC-------EEEEecCcCC----HHHHHhc-ccCcccccccCCcccccCchhccccCCccceE
Confidence 5999999999999988772 4444443443 3444555 333321100 0 001123333
Q ss_pred EEEECCCC-----------CeEEEEecCCCCCCCCChhhhhh----ccCCcEEEEeccccCCc-----ch----HHHHHH
Q 011689 244 IVLTTPDA-----------QRAMLAYQGTSSTINYDPCLVNL----ISKTNIFIVEGYLFELP-----DT----IRTITK 299 (479)
Q Consensus 244 ~v~~~~~G-----------~rt~~~~~ga~~~l~~~~~~~~~----l~~ad~v~i~g~~~~~~-----~~----~~~~~~ 299 (479)
+++-.+.| .|-++.++-.+..+...+...+. ..+.|.++++|+.+-.. .. .+.+.+
T Consensus 161 ~IlEy~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~ 240 (444)
T PF04587_consen 161 LILEYKKGEKWGDITAPRANRFIVSSDPYNPRLSILEEFFEALEEIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKE 240 (444)
T ss_dssp EEEEE-TTEEETTEE-SS-EEEEEEE-SSGGGTS--HHHHHSHHHHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHH
T ss_pred EEEEcCCCCeecceecCcCceEEEecCCCCccccchHHHHHHHHhhccCCCEEEEeccccchhhccchhHHHHHHHHHHH
Confidence 33333333 34455555555555544333333 34599999999975321 11 223333
Q ss_pred HHHHHH-hcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 300 ACEVAH-RSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 300 ~l~~ak-~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
.++..+ ..+++|-+...... ...+...+++.+++++|.+=+|++|+..++.
T Consensus 241 ~i~~l~~~~~~~iH~E~As~~-d~~l~~~i~~~ilp~vDSlGmNEqEL~~l~~ 292 (444)
T PF04587_consen 241 QIKLLKSNPDIPIHLELASFA-DEELRKEILEKILPHVDSLGMNEQELANLLS 292 (444)
T ss_dssp HHHHHH-HTT-EEEEE----S-SHHHHHHHHHHHGGGSSEEEEEHHHHHHHHH
T ss_pred HHHhccCCCCCceEEEecccc-CHHHHHHHHHHhhccccccccCHHHHHHHHH
Confidence 333445 57889999876431 2245567778899999999999999998754
No 89
>PRK14038 ADP-dependent glucokinase; Provisional
Probab=96.11 E-value=0.51 Score=49.80 Aligned_cols=164 Identities=12% Similarity=0.041 Sum_probs=86.4
Q ss_pred eeecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee------------CCCCceE
Q 011689 175 KAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI------------KDGTTGT 242 (479)
Q Consensus 175 ~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~------------~~~~T~~ 242 (479)
..+.||.+..+|-.++.++.. +| ++.++.. .+.-.+.+...+|-.-.+.- ...+.-.
T Consensus 106 ~~rmGGnAgimAn~la~~~g~-------~V--ia~~~~l--sk~qa~lf~~~~I~~p~~~~~~l~l~~p~e~~~~~~d~I 174 (453)
T PRK14038 106 ELRMGGQVGIMANLLGGVYGV-------PV--IAHVPQL--SKLQASLFLDGPIYVPTFEGGELKLVHPREFVGDEENCI 174 (453)
T ss_pred eEEeCChHHHHHHHHHhhcCC-------ce--EEECCCc--chhhHhhccCCCEEeccccCCcceeccchhcccCCCCcc
Confidence 588999999999999866551 33 6666532 11111222222221110000 0112222
Q ss_pred EEEEECCCC-----------CeEEEEecCCCCCCCCChh----hhhhccCCcEEEEeccccCCcch-HHHHHHH---HHH
Q 011689 243 VIVLTTPDA-----------QRAMLAYQGTSSTINYDPC----LVNLISKTNIFIVEGYLFELPDT-IRTITKA---CEV 303 (479)
Q Consensus 243 ~~v~~~~~G-----------~rt~~~~~ga~~~l~~~~~----~~~~l~~ad~v~i~g~~~~~~~~-~~~~~~~---l~~ 303 (479)
-+++-.+.| .|-++..+..+..+...+. ..+...+.|.++++|+.+-.... .+.+.++ ++.
T Consensus 175 H~I~Ey~~G~~~~~~~aPRaNRfI~s~D~~N~~l~~~eef~~~l~ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~ 254 (453)
T PRK14038 175 HYIYEFPRGFRVFDFEAPRENRFIGAADDYNPNLYIRPEFRERFEEIAKKAELAIISGLQALTEENYREPFETVREHLKV 254 (453)
T ss_pred EEEEEeCCCCEEeeeEcCCCceEEEecCCCCcceeecHHHHHHHHhhccCCCEEEEEchhhhccccHHHHHHHHHHHHHh
Confidence 223322333 3444444444444433222 23445679999999986432211 2333333 333
Q ss_pred HHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 304 AHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 304 ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
.+..++++-+.+.... ....+..+. .+++.+|-+-+|++|+..+..
T Consensus 255 l~~~~i~iH~EfAs~~-d~~~r~~i~-~ilp~vDSlGmNE~ELa~ll~ 300 (453)
T PRK14038 255 LNERGIPAHLEFAFTP-DETVREEIL-GLLGKFYSVGLNEVELASIME 300 (453)
T ss_pred cCcCCceEEEEeeccc-hHHHHHHHH-hhCccccccccCHHHHHHHHH
Confidence 3345778888776321 112345555 488999999999999998765
No 90
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.34 Score=48.32 Aligned_cols=174 Identities=17% Similarity=0.167 Sum_probs=87.9
Q ss_pred hccCCcEEEEeccccCCcchHHHHHHHHHHHHhcC-CEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 274 LISKTNIFIVEGYLFELPDTIRTITKACEVAHRSG-ALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 274 ~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g-~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
..+.+|.|++. ..+... +...++++..-+.. .++++|....+..... ... ....--|+.|+.-|++.|++.
T Consensus 98 ~~~~~~avviG-pGlG~~---~~~~~~~~~~l~~~~~p~ViDADaL~~la~~-~~~---~~~~~~VlTPH~gEf~rL~g~ 169 (284)
T COG0063 98 LVERADAVVIG-PGLGRD---AEGQEALKELLSSDLKPLVLDADALNLLAEL-PDL---LDERKVVLTPHPGEFARLLGT 169 (284)
T ss_pred hhccCCEEEEC-CCCCCC---HHHHHHHHHHHhccCCCEEEeCcHHHHHHhC-ccc---ccCCcEEECCCHHHHHHhcCC
Confidence 34678999996 223333 22233333333333 7899998655422111 111 112237899999999999985
Q ss_pred CCCC----cHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCC-hHHHH
Q 011689 353 SSKE----SPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVS-DLKGM 427 (479)
Q Consensus 353 ~~~~----~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~-~l~eA 427 (479)
...+ ..+.++++.++. ..+||-.|..-++...+++.+..+.-. .-.-+=|.||+.++-+.+-+.++ + +..+|
T Consensus 170 ~~~~~~~~r~~~a~~~a~~~-~~vvVLKG~~tvI~~~~g~~~~n~~G~-~~ma~GGtGDvLaGii~alLAq~-~~~~~~A 246 (284)
T COG0063 170 EVDEIEVDRLEAARELAAKY-GAVVVLKGAVTVIADPDGEVFVNPTGN-PGMATGGTGDVLAGIIGALLAQG-PADPLEA 246 (284)
T ss_pred cccccccchHHHHHHHHHHc-CCEEEEeCCCCEEEcCCCcEEEcCCCC-HHhccCcchHHHHHHHHHHHhCC-CCCHHHH
Confidence 3221 234444444444 445555565554443234544433222 22455689999776555555566 2 13333
Q ss_pred HHHHH---HHHHHH-hcccCCCCCCCCHHHHHHHHHccc
Q 011689 428 GALAA---RIAATV-VGQQGTRLSVRHASELAESFAYRI 462 (479)
Q Consensus 428 l~~A~---a~Aa~~-v~~~G~~~~~p~~~el~~~l~~~~ 462 (479)
+..|+ ..|+.. -...| -.+..|+.+.+...+
T Consensus 247 a~~g~~~h~~ag~la~~~~g----~~~a~Dl~~~ip~~~ 281 (284)
T COG0063 247 AAAGAWLHGRAGELAAKKHG----GLTATDLIEAIPRAL 281 (284)
T ss_pred HHHHHHHHHHHHHHHhhccC----CCCHHHHHHHHHHHH
Confidence 33333 223322 22222 235567766665443
No 91
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK). ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers.
Probab=94.05 E-value=0.85 Score=48.34 Aligned_cols=167 Identities=11% Similarity=0.065 Sum_probs=88.8
Q ss_pred CceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCC
Q 011689 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ 252 (479)
Q Consensus 173 ~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~ 252 (479)
....+.||.+.-+|..++++|.. +|.+-+.+... .....+...+|-.-.......+.-.-+++-.+.|+
T Consensus 100 ~~~~~mGGnAgimAn~la~~g~~-------~Vil~~p~~~k----~~~~L~~d~~i~~p~~e~~~~~d~IHlIlEy~~G~ 168 (445)
T cd01938 100 WDELRMGGNAGLMANRLAGEGDL-------KVLLGVPQSSK----LQAELFLDGPIVVPTFENLIEEDEIHLILEYPRGE 168 (445)
T ss_pred CceEEeCChHHHHHHHHHhcCCc-------eEEEecCCCcH----HHHHhCCCCCeeecccccCCCCCccEEEEEcCCCC
Confidence 34689999999999999999983 45555554332 22222222121111000001123333333333333
Q ss_pred -----------eEEEEecCCCCCCCCChhhhhhccC-CcEEEEeccccCCcc--hHHHHHHHHHH----HH--hcCCEEE
Q 011689 253 -----------RAMLAYQGTSSTINYDPCLVNLISK-TNIFIVEGYLFELPD--TIRTITKACEV----AH--RSGALVA 312 (479)
Q Consensus 253 -----------rt~~~~~ga~~~l~~~~~~~~~l~~-ad~v~i~g~~~~~~~--~~~~~~~~l~~----ak--~~g~~v~ 312 (479)
|-++..+..+.....++....+.+. .|.++++|+.+-... ......+.++. .+ +..+++-
T Consensus 169 ~~~~~~aPraNRfI~~~d~~n~l~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~~~~l~~l~~~i~iH 248 (445)
T cd01938 169 SWGDFVAPRANRFIFHDDDNNPMLMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERVKSILEILPPLIPIH 248 (445)
T ss_pred EecceEcCCCCeEEEecCCcchhhhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHHHHHHHhccccCcEE
Confidence 4444333333311122233333444 899999998652211 01222222222 22 2337777
Q ss_pred EeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 313 VTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 313 ~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
|...... ...+...+++.+++++|-+=+|++|+..++.
T Consensus 249 ~E~As~~-d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~~ 286 (445)
T cd01938 249 LELASTV-DEELREEILHEVVPYVDSLGLNEQELANLLQ 286 (445)
T ss_pred EEecccc-cHHHHHHHHHHhcccccccccCHHHHHHHHH
Confidence 7765432 2245567777889999999999999998764
No 92
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=88.30 E-value=0.14 Score=41.71 Aligned_cols=20 Identities=25% Similarity=0.508 Sum_probs=0.0
Q ss_pred CCCCCCCCCcccccccCCCC
Q 011689 80 GGGDLGRDNYEEDDEAGDES 99 (479)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~ 99 (479)
||+|.-+|.+|++++++..+
T Consensus 8 g~~dse~dsdEdeeeededE 27 (101)
T PF09026_consen 8 GEEDSESDSDEDEEEEDEDE 27 (101)
T ss_dssp --------------------
T ss_pred cCcccccccccchhhhhhcc
Confidence 55666666666544444333
No 93
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=82.98 E-value=9 Score=36.53 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=47.9
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEE-----cCHHHHHHhhC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVF-----ANSDEARAFCH 351 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~-----~N~~Ea~~L~g 351 (479)
+..-|.++|--+.+. .+.+.++++.+|+.|+.+.+|.++.. ..+.++.+++.+|.+. ++.+..+.++|
T Consensus 38 sggGVt~SGGEPllq--~~fl~~l~~~~k~~gi~~~leTnG~~-----~~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG 110 (213)
T PRK10076 38 SGGGVTLSGGEVLMQ--AEFATRFLQRLRLWGVSCAIETAGDA-----PASKLLPLAKLCDEVLFDLKIMDATQARDVVK 110 (213)
T ss_pred CCCEEEEeCchHHcC--HHHHHHHHHHHHHcCCCEEEECCCCC-----CHHHHHHHHHhcCEEEEeeccCCHHHHHHHHC
Confidence 346788887533322 67788999999999999999998642 1233455666666654 46666778888
Q ss_pred CC
Q 011689 352 FS 353 (479)
Q Consensus 352 ~~ 353 (479)
..
T Consensus 111 ~~ 112 (213)
T PRK10076 111 MN 112 (213)
T ss_pred CC
Confidence 54
No 94
>KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only]
Probab=74.92 E-value=10 Score=38.60 Aligned_cols=164 Identities=14% Similarity=0.134 Sum_probs=84.8
Q ss_pred CCceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCC
Q 011689 172 CSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDA 251 (479)
Q Consensus 172 ~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G 251 (479)
.+...+.||.+.-.|.-...-|. +.++|..|.-...-.+-+..+-.|-. ++.. -.-+++-.+.|
T Consensus 136 ~R~~~~mGGNA~LMA~R~~~~~~---------~~LlG~~~~R~~~~L~P~~~R~~~~~-----I~~D--diHlILEYK~G 199 (478)
T KOG4184|consen 136 ERINWYMGGNAPLMAVRFFMEGA---------QVLLGAHMSRKLRPLLPKEIRLAGDE-----IPND--DIHLILEYKAG 199 (478)
T ss_pred hhhhhhccCCchHHHHHHHhccc---------eeeecccccchhccccchhhhcccCc-----CcCC--ceEEEEEeccC
Confidence 35677899998888887777665 78999988754332222222222211 1111 11122222233
Q ss_pred C-----------eEEEEecCCCCCCCCChhhhhhcc--CCcEEEEeccccCCcchHH----HHHHHHHHHH--hcCCEEE
Q 011689 252 Q-----------RAMLAYQGTSSTINYDPCLVNLIS--KTNIFIVEGYLFELPDTIR----TITKACEVAH--RSGALVA 312 (479)
Q Consensus 252 ~-----------rt~~~~~ga~~~l~~~~~~~~~l~--~ad~v~i~g~~~~~~~~~~----~~~~~l~~ak--~~g~~v~ 312 (479)
+ |.+...+..+..+..-+...+.++ +.|+++++|..+..-.+.+ .+..+.+... ..|+++-
T Consensus 200 d~~G~~VAP~anR~I~~~D~~n~~m~~~E~f~~Al~~fqPdLvVvsGlhmme~qske~r~~rl~~V~r~L~~iP~gip~H 279 (478)
T KOG4184|consen 200 DKWGPYVAPRANRYILHNDRNNPHMRAVEQFTDALKMFQPDLVVVSGLHMMEMQSKEEREARLQQVVRSLSDIPTGIPVH 279 (478)
T ss_pred CcccccccccccceeeecCCCChHHHHHHHHHHHHHHhCCCEEEEechhHHhhhhHHHHHHHHHHHHHHHhcCCCCCchh
Confidence 3 333332222222221122223333 6799999997542111111 1111111111 2466676
Q ss_pred EeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 313 VTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 313 ~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
+.+.+.. ...+..++...+++++|=+=+|++|+..|...
T Consensus 280 lElaS~~-~~~l~~~i~h~VlPyVdSLGlNEQEL~fL~q~ 318 (478)
T KOG4184|consen 280 LELASMT-NRELMSSIVHQVLPYVDSLGLNEQELLFLTQS 318 (478)
T ss_pred hhHhHHH-HHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence 6665421 11233455667889999999999999988653
No 95
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=66.03 E-value=2.9 Score=47.16 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=7.5
Q ss_pred CCCcccccccCCCCccC
Q 011689 86 RDNYEEDDEAGDESEAD 102 (479)
Q Consensus 86 ~~~~~~~~~~~~~~~~~ 102 (479)
|++++++|++|+++.++
T Consensus 1401 r~~~dd~DeeeD~e~Ed 1417 (1516)
T KOG1832|consen 1401 RPTDDDSDEEEDDETED 1417 (1516)
T ss_pred CCCccccCccccchhhc
Confidence 44444444444444333
No 96
>PF09026 CENP-B_dimeris: Centromere protein B dimerisation domain; InterPro: IPR015115 Centromere protein B (CENP-B) interacts with centromeric heterochromatin in chromosomes and binds to a specific subset of alphoid satellite DNA, called the CENP-B box. CENP-B may organise arrays of centromere satellite DNA into a higher order structure, which then directs centromere formation and kinetochore assembly in mammalian chromosomes. The CENP-B dimerisation domain is composed of two alpha-helices, which are folded into an antiparallel configuration. Dimerisation of CENP-B is mediated by this domain, in which monomers dimerise to form a symmetrical, antiparallel, four-helix bundle structure with a large hydrophobic patch in which 23 residues of one monomer form van der Waals contacts with the other monomer. This CENP-B dimer configuration may be suitable for capturing two distant CENP-B boxes during centromeric heterochromatin formation []. ; GO: 0003677 DNA binding, 0003682 chromatin binding, 0006355 regulation of transcription, DNA-dependent, 0000775 chromosome, centromeric region, 0005634 nucleus; PDB: 1UFI_A.
Probab=62.45 E-value=2.5 Score=34.64 Aligned_cols=18 Identities=28% Similarity=0.501 Sum_probs=0.0
Q ss_pred CCCCcccccccCCCCccC
Q 011689 85 GRDNYEEDDEAGDESEAD 102 (479)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~ 102 (479)
++|.+.+.|+++++++++
T Consensus 9 ~~dse~dsdEdeeeeded 26 (101)
T PF09026_consen 9 EEDSESDSDEDEEEEDED 26 (101)
T ss_dssp ------------------
T ss_pred Ccccccccccchhhhhhc
Confidence 345555544444444433
No 97
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=61.97 E-value=71 Score=31.38 Aligned_cols=71 Identities=14% Similarity=0.035 Sum_probs=49.1
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEc-----CHHHHHHhhC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFA-----NSDEARAFCH 351 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~-----N~~Ea~~L~g 351 (479)
..+.|.++|--+.+ ..+.+.++++.+|+.|..+.+|.++... .+..+.+++.+|.+.+ +.+-.+.+++
T Consensus 83 ~~~gvt~SGGEP~~--q~e~~~~~~~~ake~Gl~~~l~TnG~~~-----~~~~~~l~~~~D~v~~DlK~~~~~~y~~~tg 155 (260)
T COG1180 83 SGGGVTFSGGEPTL--QAEFALDLLRAAKERGLHVALDTNGFLP-----PEALEELLPLLDAVLLDLKAFDDELYRKLTG 155 (260)
T ss_pred CCCEEEEECCcchh--hHHHHHHHHHHHHHCCCcEEEEcCCCCC-----HHHHHHHHhhcCeEEEeeccCChHHHHHHhC
Confidence 57888888754332 3788999999999999999999886422 2233455566776644 4444778887
Q ss_pred CCC
Q 011689 352 FSS 354 (479)
Q Consensus 352 ~~~ 354 (479)
...
T Consensus 156 ~~~ 158 (260)
T COG1180 156 ADN 158 (260)
T ss_pred CCc
Confidence 654
No 98
>COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism]
Probab=53.27 E-value=2.9e+02 Score=28.93 Aligned_cols=81 Identities=7% Similarity=-0.028 Sum_probs=50.6
Q ss_pred hhhccCCcEEEEeccccCC------cchH---HHHHHHHHHHHh-cCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEc
Q 011689 272 VNLISKTNIFIVEGYLFEL------PDTI---RTITKACEVAHR-SGALVAVTASDVTCIERHYDDFWEIVGNYADIVFA 341 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~------~~~~---~~~~~~l~~ak~-~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~ 341 (479)
.+..+..|...++||..-. +... +...+-++..|+ .++++-+.+....- ...+...+..+++.++=+=+
T Consensus 220 ~~i~~~vDgaiiSGyq~l~eey~dg~t~~~yle~s~e~i~~lk~~~~irvHlEfas~~d-~~irk~i~~~il~~v~SvGl 298 (466)
T COG4809 220 DEIAKEVDGAIISGYQGLKEEYSDGSTYKYYLERSREDIKALKDRENIRVHLEFASIQD-RKIRKEILTNILSIVYSVGL 298 (466)
T ss_pred HHHhhhcceeeeechhhhhhhcCCCCcHHHHHHHHHHHHHHHhccccceEEEEeccccc-HHHHHHHHHHHHhhhhhcCC
Confidence 3455679999999986421 1111 222233334445 67777777654321 23456667778899999999
Q ss_pred CHHHHHHhhCCC
Q 011689 342 NSDEARAFCHFS 353 (479)
Q Consensus 342 N~~Ea~~L~g~~ 353 (479)
|+.|+..+....
T Consensus 299 dE~ElA~vl~vl 310 (466)
T COG4809 299 DEVELANVLNVL 310 (466)
T ss_pred CHHHHHHHHHhh
Confidence 999998776543
No 99
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
Probab=50.60 E-value=1.1e+02 Score=29.16 Aligned_cols=91 Identities=22% Similarity=0.116 Sum_probs=55.7
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEc--CHHHHHHhhCCC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFA--NSDEARAFCHFS 353 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~--N~~Ea~~L~g~~ 353 (479)
..+||+.+.|.. + ..++..+++.+++.|..+.+|+-..+-... ....++. -.+|++.. +.+.- ..|..
T Consensus 79 aGAd~~tV~g~A---~--~~TI~~~i~~A~~~~~~v~iDl~~~~~~~~-~~~~l~~--~gvd~~~~H~g~D~q--~~G~~ 148 (217)
T COG0269 79 AGADWVTVLGAA---D--DATIKKAIKVAKEYGKEVQIDLIGVWDPEQ-RAKWLKE--LGVDQVILHRGRDAQ--AAGKS 148 (217)
T ss_pred cCCCEEEEEecC---C--HHHHHHHHHHHHHcCCeEEEEeecCCCHHH-HHHHHHH--hCCCEEEEEecccHh--hcCCC
Confidence 579999998754 2 688999999999999999999864321111 1111222 36666655 44432 25654
Q ss_pred C-CCcHHHHHHHHhcCCCEEEEeec
Q 011689 354 S-KESPESTTRYLSHFVPLVSVTDG 377 (479)
Q Consensus 354 ~-~~~~~~a~~~l~~g~~~VVVT~G 377 (479)
. .++....+++...| -.+-||-|
T Consensus 149 ~~~~~l~~ik~~~~~g-~~vAVaGG 172 (217)
T COG0269 149 WGEDDLEKIKKLSDLG-AKVAVAGG 172 (217)
T ss_pred ccHHHHHHHHHhhccC-ceEEEecC
Confidence 3 34455566666555 34555544
No 100
>PRK15447 putative protease; Provisional
Probab=49.93 E-value=2.4e+02 Score=28.23 Aligned_cols=74 Identities=9% Similarity=0.062 Sum_probs=43.8
Q ss_pred CCcEEEEeccccC--CcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCc-EEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFE--LPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYAD-IVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~--~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~D-vl~~N~~Ea~~L~ 350 (479)
.+|.||+..-.+. .+-+.+.+.++++.++++|++|++-....-..+.....+.+.+-...| |+.-|..++..+-
T Consensus 28 gaDaVY~g~~~~~~R~~f~~~~l~e~v~~~~~~gkkvyva~p~i~~~~~e~~~l~~~l~~~~~~v~v~d~g~l~~~~ 104 (301)
T PRK15447 28 PVDIVYLGETVCSKRRELKVGDWLELAERLAAAGKEVVLSTLALVEAPSELKELRRLVENGEFLVEANDLGAVRLLA 104 (301)
T ss_pred CCCEEEECCccCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccccCHHHHHHHHHHHhcCCCEEEEeCHHHHHHHH
Confidence 7999999743221 223478899999999999999998653321112222222222223345 4455777666554
No 101
>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues. The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus
Probab=49.62 E-value=21 Score=34.75 Aligned_cols=23 Identities=17% Similarity=0.206 Sum_probs=13.5
Q ss_pred ccCCccchhhhhhhhhccccccc
Q 011689 24 HHHPHRTKLQALVFRKFSLGKER 46 (479)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~ 46 (479)
-|--.-||--.+--|++..|...
T Consensus 216 g~et~eTkdLSmStR~hkyGRQ~ 238 (314)
T PF06524_consen 216 GYETQETKDLSMSTRSHKYGRQG 238 (314)
T ss_pred CCcccccccceeeeecchhcccc
Confidence 34445566656666777776543
No 102
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=46.41 E-value=2e+02 Score=26.56 Aligned_cols=111 Identities=20% Similarity=0.181 Sum_probs=65.9
Q ss_pred cEEEEEEe--CCCchHHHHHHHHHhcCCCceeeeeC-----CCCceEEEEEECCCCCeEEEEecCCCC-CC-----CCCh
Q 011689 203 NVAMTGSV--GSDPLGGFYRAKLRRANVAFCSEPIK-----DGTTGTVIVLTTPDAQRAMLAYQGTSS-TI-----NYDP 269 (479)
Q Consensus 203 ~v~~ig~V--G~D~~G~~i~~~L~~~GVd~~~v~~~-----~~~T~~~~v~~~~~G~rt~~~~~ga~~-~l-----~~~~ 269 (479)
++.+-|.. |.-..-..+.+.|++.|.....+..+ ..++|+.++-++ +|++..+.+.+... .+ ..+.
T Consensus 7 ki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~GF~Ivdl~-tg~~~~la~~~~~~~rvGkY~V~v~~ 85 (179)
T COG1618 7 KIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRIGFKIVDLA-TGEEGILARVGFSRPRVGKYGVNVEG 85 (179)
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeEeeeEEEEcc-CCceEEEEEcCCCCcccceEEeeHHH
Confidence 34444443 34445667888999998887765432 236777776665 68888887776531 11 1111
Q ss_pred -------hhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeC
Q 011689 270 -------CLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTA 315 (479)
Q Consensus 270 -------~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~ 315 (479)
....+++.+|++.++-..+. ........++++..-+.+.++++-+
T Consensus 86 le~i~~~al~rA~~~aDvIIIDEIGpM-Elks~~f~~~ve~vl~~~kpliatl 137 (179)
T COG1618 86 LEEIAIPALRRALEEADVIIIDEIGPM-ELKSKKFREAVEEVLKSGKPLIATL 137 (179)
T ss_pred HHHHhHHHHHHHhhcCCEEEEecccch-hhccHHHHHHHHHHhcCCCcEEEEE
Confidence 12344567899999865421 1124556667777666677666644
No 103
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=42.47 E-value=3.4e+02 Score=26.57 Aligned_cols=67 Identities=12% Similarity=0.040 Sum_probs=46.6
Q ss_pred hhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHH
Q 011689 269 PCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEA 346 (479)
Q Consensus 269 ~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea 346 (479)
++......++|++++.+..+ + .+.+.++++.++..|..+.+|..+.. +.....--.+|++-+|....
T Consensus 125 qi~~a~~~GAD~VlLi~~~l--~--~~~l~~li~~a~~lGl~~lvevh~~~-------E~~~A~~~gadiIgin~rdl 191 (260)
T PRK00278 125 QIYEARAAGADAILLIVAAL--D--DEQLKELLDYAHSLGLDVLVEVHDEE-------ELERALKLGAPLIGINNRNL 191 (260)
T ss_pred HHHHHHHcCCCEEEEEeccC--C--HHHHHHHHHHHHHcCCeEEEEeCCHH-------HHHHHHHcCCCEEEECCCCc
Confidence 34444456899999987653 2 46889999999999999999987542 11112224789998885443
No 104
>PF02084 Bindin: Bindin; InterPro: IPR000775 Bindin, the major protein component of the acrosome granule of sea urchin sperm, mediates species-specific adhesion of sperm to the egg surface during fertilisation [, ]. The protein coats the acrosomal process after externalisation by the acrosome reaction; it binds to sulphated, fucose-containing polysaccharides on the vitelline-layer receptor proteoglycans that cover the egg plasma membrane. Bindins from different genera show high levels of sequence similarity in both the mature bindin domain and in the probindin precursor region. The most highly conserved region is a 42-residue segment in the central portion of the mature bindin protein. This domain may be responsible for conserved functions of bindin, while the more highly divergent flanking regions may be responsible for its species-specific properties [].; GO: 0007342 fusion of sperm to egg plasma membrane
Probab=41.46 E-value=4.4 Score=38.43 Aligned_cols=32 Identities=9% Similarity=0.184 Sum_probs=23.9
Q ss_pred HHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhc
Q 011689 187 VALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRA 226 (479)
Q Consensus 187 ~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~ 226 (479)
+.|+.|-. ...++..||+-+.-+.++..|+++
T Consensus 132 LLLRhLRH--------HSNLLAnIgdP~VreqVLsAMqEe 163 (238)
T PF02084_consen 132 LLLRHLRH--------HSNLLANIGDPEVREQVLSAMQEE 163 (238)
T ss_pred HHHHHHHH--------HHHHHhhcCCHHHHHHHHHHHhhh
Confidence 45666666 677888888887778888888765
No 105
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=39.47 E-value=47 Score=28.22 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=27.9
Q ss_pred hhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCCh
Q 011689 271 LVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDV 318 (479)
Q Consensus 271 ~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~ 318 (479)
..+.+.++|+++++. + .....++...+.+.|+ .++|.+..
T Consensus 60 ~~~~~~~~Dvvf~a~-----~--~~~~~~~~~~~~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 60 DPEELSDVDVVFLAL-----P--HGASKELAPKLLKAGI-KVIDLSGD 99 (121)
T ss_dssp SGHHHTTESEEEE-S-----C--HHHHHHHHHHHHHTTS-EEEESSST
T ss_pred chhHhhcCCEEEecC-----c--hhHHHHHHHHHhhCCc-EEEeCCHH
Confidence 344568999999972 3 4566777777778887 67888753
No 106
>PF02044 Bombesin: Bombesin-like peptide; InterPro: IPR000874 Bombesin-like peptides comprise a large family of peptides which were initially isolated from amphibian skin, where they stimulate smooth muscle contraction. They were later found to be widely distributed in mammalian neural and endocrine cells. The amphibian peptides which belong to this family are currently classified into three subfamilies [, ]; the Bombesin group, which includes bombesin and alytesin; the Ranatensin group, which includes ranatensins, litorin, and Rohdei litorin; and the Phyllolitorin group, which includes Leu(8)- and Phe(8)-phyllolitorins. In mammals and birds two categories of bombesin-like peptides are known [, ], gastrin-releasing peptide (GRP), which stimulates the release of gastrin as well as other gastrointestinal hormones, and neuromedin B (NMB), a neuropeptide whose function is not yet clear. Bombesin-like peptides, like many other active peptides, are synthesized as larger protein precursors that are enzymatically converted to their mature forms. The final peptides are eight to fourteen residues long.; GO: 0007218 neuropeptide signaling pathway; PDB: 1C9A_A 1C98_A.
Probab=36.29 E-value=9.9 Score=19.76 Aligned_cols=9 Identities=67% Similarity=1.021 Sum_probs=3.5
Q ss_pred ccccccccc
Q 011689 47 VRGGFMGKK 55 (479)
Q Consensus 47 ~~~~~~~~~ 55 (479)
..|-|||||
T Consensus 5 AvGh~Mgkk 13 (14)
T PF02044_consen 5 AVGHFMGKK 13 (14)
T ss_dssp HHHCT----
T ss_pred ceeeeeccC
Confidence 357899997
No 107
>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=34.54 E-value=24 Score=41.45 Aligned_cols=11 Identities=36% Similarity=0.410 Sum_probs=7.2
Q ss_pred CCccchhHHHH
Q 011689 400 VDTCGAGDAYA 410 (479)
Q Consensus 400 vDttGAGDaF~ 410 (479)
-|..|-||+..
T Consensus 2106 edkr~R~DaLh 2116 (3015)
T KOG0943|consen 2106 EDKRARGDALH 2116 (3015)
T ss_pred hhhhcchhHHH
Confidence 46667777765
No 108
>PRK05967 cystathionine beta-lyase; Provisional
Probab=32.79 E-value=4.1e+02 Score=27.83 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=27.9
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
.+.++|+++...... .....+.++.+.|+++|+.+++|-.
T Consensus 148 ~~TklV~lesPsNP~-l~v~dl~~I~~la~~~g~~vvVD~t 187 (395)
T PRK05967 148 PNTKVVHTEAPGSNT-FEMQDIPAIAEAAHRHGAIVMMDNT 187 (395)
T ss_pred cCceEEEEECCCCCC-CcHHHHHHHHHHHHHhCCEEEEECC
Confidence 357788887422111 1256788899999999999999954
No 109
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=31.75 E-value=3.2e+02 Score=28.29 Aligned_cols=20 Identities=40% Similarity=0.620 Sum_probs=15.3
Q ss_pred HHHHHHHHHhcCCEEEEeCC
Q 011689 297 ITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 297 ~~~~l~~ak~~g~~v~~D~~ 316 (479)
+.++.+.+++.++.+++|-.
T Consensus 165 l~~I~~la~~~gi~livD~t 184 (390)
T PRK08133 165 IAALAEIAHAAGALLVVDNC 184 (390)
T ss_pred HHHHHHHHHHcCCEEEEECC
Confidence 56777778888888888853
No 110
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=31.72 E-value=1.6e+02 Score=24.30 Aligned_cols=60 Identities=13% Similarity=0.209 Sum_probs=33.9
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcC---CEEEEeCCChhhhhhhhHHHHHHhcccCcEEE
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSG---ALVAVTASDVTCIERHYDDFWEIVGNYADIVF 340 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g---~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~ 340 (479)
++||+++++.-....+ ..+.+...++.+++.+ .+|++-- +......+.+....+.+|+++
T Consensus 35 e~AD~iiiNTC~V~~~-Ae~k~~~~i~~l~~~~~~~~~ivv~G----C~aq~~~~~l~~~~p~vd~v~ 97 (98)
T PF00919_consen 35 EEADVIIINTCTVRES-AEQKSRNRIRKLKKLKKPGAKIVVTG----CMAQRYGEELKKEFPEVDLVV 97 (98)
T ss_pred ccCCEEEEEcCCCCcH-HHHHHHHHHHHHHHhcCCCCEEEEEe----CccccChHHHHhhCCCeEEEe
Confidence 5789999976554433 2334444444444443 6677642 333333444555667888875
No 111
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=30.25 E-value=3.7e+02 Score=28.48 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=59.1
Q ss_pred CceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchH---HHHHHHHHhcCCCceeeeeCCCCceEEEEEECC
Q 011689 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLG---GFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTP 249 (479)
Q Consensus 173 ~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G---~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~ 249 (479)
......+|.+++.+..++-++.. +-.++ ..+-|+ ..+...+...|+++.++..
T Consensus 78 ~av~~~SG~aAi~~al~all~~G-------D~VI~---~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~-------------- 133 (432)
T PRK06702 78 GAVATASGQAAIMLAVLNICSSG-------DHLLC---SSTVYGGTFNLFGVSLRKLGIDVTFFNP-------------- 133 (432)
T ss_pred cEEEECCHHHHHHHHHHHhcCCC-------CEEEE---CCCchHHHHHHHHHHHHHCCCEEEEECC--------------
Confidence 45567888888887776666541 22222 233455 4445557888987665411
Q ss_pred CCCeEEEEecCCCCCCCCChhhhhhccCCcEEEEeccccCCcc-hHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 250 DAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIVEGYLFELPD-TIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 250 ~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i~g~~~~~~~-~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
.++++.+...+-.+.++|++.. +..|. ..-.+.++.+.|+++|+.+++|-.
T Consensus 134 --------------~~d~~~l~~~I~~~Tk~I~~e~--pgnP~~~v~Di~~I~~iA~~~gi~livD~T 185 (432)
T PRK06702 134 --------------NLTADEIVALANDKTKLVYAES--LGNPAMNVLNFKEFSDAAKELEVPFIVDNT 185 (432)
T ss_pred --------------CCCHHHHHHhCCcCCeEEEEEc--CCCccccccCHHHHHHHHHHcCCEEEEECC
Confidence 0111222111123467777753 22231 011367888889999999999864
No 112
>PRK09028 cystathionine beta-lyase; Provisional
Probab=29.93 E-value=4.7e+02 Score=27.30 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=27.5
Q ss_pred cCCcEEEEeccccCCcc-hHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 276 SKTNIFIVEGYLFELPD-TIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~-~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
.+.++|+++.-. .|. ....+.++++.++++|+.+++|-.
T Consensus 145 ~~TklV~lesps--NPtg~v~dl~~I~~la~~~g~~lvvD~t 184 (394)
T PRK09028 145 PNTKVLFLESPG--SITMEVQDVPTLSRIAHEHDIVVMLDNT 184 (394)
T ss_pred cCceEEEEECCC--CCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 357788886432 221 256678889999999999999854
No 113
>PRK07050 cystathionine beta-lyase; Provisional
Probab=28.86 E-value=5.9e+02 Score=26.44 Aligned_cols=103 Identities=13% Similarity=0.052 Sum_probs=56.8
Q ss_pred CceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHH---HHHHHHHhcCCCceeeeeCCCCceEEEEEECC
Q 011689 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGG---FYRAKLRRANVAFCSEPIKDGTTGTVIVLTTP 249 (479)
Q Consensus 173 ~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~---~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~ 249 (479)
......||..++.+...+-++.. +..++.. ..|+. .+...++..|+++.++...
T Consensus 82 ~~l~~~sgt~Ai~~~l~al~~~G-------D~Vl~~~---~~y~~~~~~~~~~~~~~Gi~v~~vd~~------------- 138 (394)
T PRK07050 82 HALLQPSGLAAISLVYFGLVKAG-------DDVLIPD---NAYGPNRDHGEWLARDFGITVRFYDPL------------- 138 (394)
T ss_pred eEEEeccHHHHHHHHHHHHhCCC-------CEEEEec---CCcccHHHHHHHHHHhcCeEEEEECCC-------------
Confidence 45677899988887776666531 3333333 23332 2334566778776543210
Q ss_pred CCCeEEEEecCCCCCCCCChhhhhhc-cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 250 DAQRAMLAYQGTSSTINYDPCLVNLI-SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 250 ~G~rt~~~~~ga~~~l~~~~~~~~~l-~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
+. +++ .+.+ .+.++|+++...... .....+.++.+.++++|+.+++|-.
T Consensus 139 ~~----------------~~l-~~~i~~~tklV~le~p~Np~-~~~~di~~I~~ia~~~gi~livD~a 188 (394)
T PRK07050 139 IG----------------AGI-ADLIQPNTRLIWLEAPGSVT-MEVPDVPAITAAARARGVVTAIDNT 188 (394)
T ss_pred CH----------------HHH-HHhcCCCCeEEEEECCCCCC-ccHhhHHHHHHHHHHcCCEEEEECC
Confidence 00 011 1112 346777765321100 1256678888889999999999864
No 114
>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0
Probab=27.89 E-value=4.2e+02 Score=26.01 Aligned_cols=67 Identities=18% Similarity=0.101 Sum_probs=40.4
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEc-----CHHHHHHhhCC
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFA-----NSDEARAFCHF 352 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~-----N~~Ea~~L~g~ 352 (479)
..|.++|--+.+ ..+.+.++++.+++.|..+.++.++... .+.++.+++..|++.+ +.+....+.|.
T Consensus 127 ~~V~~sGGEPll--~~~~l~~l~~~~k~~g~~~~i~TnG~~~-----~~~~~~ll~~~d~~~isl~~~~~~~~~~~~g~ 198 (295)
T TIGR02494 127 GGVTLSGGEPLL--QPEFALALLQACHERGIHTAVETSGFTP-----WETIEKVLPYVDLFLFDIKHLDDERHKEVTGV 198 (295)
T ss_pred CcEEeeCcchhc--hHHHHHHHHHHHHHcCCcEeeeCCCCCC-----HHHHHHHHhhCCEEEEeeccCChHHHHHHhCC
Confidence 456776632222 1455678999999999888888775421 2234445566776543 45555566663
No 115
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=27.51 E-value=4.1e+02 Score=27.17 Aligned_cols=39 Identities=28% Similarity=0.332 Sum_probs=24.0
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
+.++|++....... .....+.++.+.++++|+.+++|-.
T Consensus 125 ~~~~v~~e~~~np~-g~~~dl~~i~~la~~~g~~livD~t 163 (369)
T cd00614 125 ETKLVYVESPTNPT-LKVVDIEAIAELAHEHGALLVVDNT 163 (369)
T ss_pred CCeEEEEECCCCCC-CeecCHHHHHHHHHHcCCEEEEECC
Confidence 46677765432110 0122366778888899999999854
No 116
>PRK04169 geranylgeranylglyceryl phosphate synthase-like protein; Reviewed
Probab=27.31 E-value=2.5e+02 Score=27.15 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=30.8
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCCh
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDV 318 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~ 318 (479)
...+|.+.+.|+. ... .+.+.++++..|+...++++-|++.
T Consensus 30 ~~gtdai~vGGS~-~vt--~~~~~~~v~~ik~~~lPvilfp~~~ 70 (232)
T PRK04169 30 ESGTDAIIVGGSD-GVT--EENVDELVKAIKEYDLPVILFPGNI 70 (232)
T ss_pred hcCCCEEEEcCCC-ccc--hHHHHHHHHHHhcCCCCEEEeCCCc
Confidence 3568999999874 222 4667778888888888999988765
No 117
>PRK05968 hypothetical protein; Provisional
Probab=26.81 E-value=7.2e+02 Score=25.65 Aligned_cols=41 Identities=12% Similarity=0.201 Sum_probs=26.9
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
+.+.++|+++...-. .-....+.++.+.++++|+.+++|-.
T Consensus 145 i~~tklV~ie~pt~~-~~~~~dl~~i~~la~~~gi~vivD~a 185 (389)
T PRK05968 145 LPGAKLLYLESPTSW-VFELQDVAALAALAKRHGVVTMIDNS 185 (389)
T ss_pred cccCCEEEEECCCCC-CCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 345677777632211 11246677888888999999999863
No 118
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=26.37 E-value=4e+02 Score=22.90 Aligned_cols=18 Identities=39% Similarity=0.370 Sum_probs=16.6
Q ss_pred ecCchHHHHHHHHHHhCC
Q 011689 177 AAGGSLSNSLVALARLGG 194 (479)
Q Consensus 177 ~~GG~a~NvA~ala~LG~ 194 (479)
-.||-|..+|.+|++.|.
T Consensus 6 G~GglGs~ia~~L~~~Gv 23 (143)
T cd01483 6 GLGGLGSEIALNLARSGV 23 (143)
T ss_pred CCCHHHHHHHHHHHHCCC
Confidence 479999999999999998
No 119
>PHA00438 hypothetical protein
Probab=26.34 E-value=48 Score=26.17 Aligned_cols=17 Identities=29% Similarity=0.647 Sum_probs=14.7
Q ss_pred ccchhHHHHHHHHHHHH
Q 011689 402 TCGAGDAYASGILYGIL 418 (479)
Q Consensus 402 ttGAGDaF~Agfl~~l~ 418 (479)
-.|..++|+|||++|+.
T Consensus 46 ~~G~SE~~IaGfl~Gl~ 62 (81)
T PHA00438 46 QAGYSEAFIAGFLAGLQ 62 (81)
T ss_pred HcCCcHHHHHHHHHHHH
Confidence 36889999999999985
No 120
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=26.20 E-value=5.5e+02 Score=24.10 Aligned_cols=57 Identities=14% Similarity=0.079 Sum_probs=34.6
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFAN 342 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N 342 (479)
.++|++.+++..-..| ..+.++++..|+....+.-|.+... +.....--.+|++-..
T Consensus 63 aGadIIAlDaT~R~Rp---~~l~~li~~i~~~~~l~MADist~e-------e~~~A~~~G~D~I~TT 119 (192)
T PF04131_consen 63 AGADIIALDATDRPRP---ETLEELIREIKEKYQLVMADISTLE-------EAINAAELGFDIIGTT 119 (192)
T ss_dssp CT-SEEEEE-SSSS-S---S-HHHHHHHHHHCTSEEEEE-SSHH-------HHHHHHHTT-SEEE-T
T ss_pred cCCCEEEEecCCCCCC---cCHHHHHHHHHHhCcEEeeecCCHH-------HHHHHHHcCCCEEEcc
Confidence 5899999998754444 6788888999999988899987542 2222222367777543
No 121
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=25.98 E-value=1.5e+02 Score=27.73 Aligned_cols=128 Identities=9% Similarity=0.004 Sum_probs=60.7
Q ss_pred eCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEEEeccc--
Q 011689 210 VGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIVEGYL-- 287 (479)
Q Consensus 210 VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i~g~~-- 287 (479)
+|++.....+++.|++.+.+...+.....+........ .......... .............+++.+++.|-.
T Consensus 2 ~GD~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~vii~GGg~~ 75 (286)
T PF04230_consen 2 IGDDLILEALLKLLKKHGPDAEIIIFSPDPDEFSKYYK--NKSIFNIDLS----KLWRKRRRKSKIKNADDVIIGGGGGS 75 (286)
T ss_pred chHHHHHHHHHHHHHhcCCceEEEEeCCChHHHHHHhc--ccccchhhhh----hhhhhhhcccccccCCeEEEECCccc
Confidence 57787888899999999977765443221100000000 0000000000 000000000000456666666541
Q ss_pred --cCCc--chHHHHHHHHHHHHhcCCEEEEeCCCh-hhhhhhhHHHHHHhcccCcEEEcCHH
Q 011689 288 --FELP--DTIRTITKACEVAHRSGALVAVTASDV-TCIERHYDDFWEIVGNYADIVFANSD 344 (479)
Q Consensus 288 --~~~~--~~~~~~~~~l~~ak~~g~~v~~D~~~~-~~~~~~~~~~~~~ll~~~Dvl~~N~~ 344 (479)
.... ... ........++..+.++++=..+. ..........+..+++.++++.+=.+
T Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~~~~pv~~~g~g~gp~~~~~~~~~~~~~l~~~~~i~vRD~ 136 (286)
T PF04230_consen 76 DNNFIDLWSLP-IFLRWLFLAKKLGKPVIILGQGIGPFRSEEFKKLLRRILSKADYISVRDE 136 (286)
T ss_pred ccCCCcchhhH-HHHHHHHHHHhcCCCeEEECceECccCCHHHHHHHHHHHhCCCEEEECCH
Confidence 1111 011 33566667788888877655443 22233345566777888988776433
No 122
>PRK06444 prephenate dehydrogenase; Provisional
Probab=25.77 E-value=2.6e+02 Score=26.21 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=20.0
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAF 230 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~ 230 (479)
++.+||.- ...|+++...|++.|..+
T Consensus 2 ~~~iiG~~--G~mG~~~~~~~~~~g~~v 27 (197)
T PRK06444 2 MEIIIGKN--GRLGRVLCSILDDNGLGV 27 (197)
T ss_pred EEEEEecC--CcHHHHHHHHHHhCCCEE
Confidence 46677744 458999999999998664
No 123
>PRK07582 cystathionine gamma-lyase; Validated
Probab=25.60 E-value=3.8e+02 Score=27.44 Aligned_cols=19 Identities=32% Similarity=0.515 Sum_probs=13.7
Q ss_pred HHHHHHHHHhcCCEEEEeC
Q 011689 297 ITKACEVAHRSGALVAVTA 315 (479)
Q Consensus 297 ~~~~l~~ak~~g~~v~~D~ 315 (479)
+.++.+.+++.|+.+++|-
T Consensus 151 i~~I~~~a~~~g~~lvVD~ 169 (366)
T PRK07582 151 LAALAAAAHAAGALLVVDN 169 (366)
T ss_pred HHHHHHHHHHcCCEEEEEC
Confidence 5666677777778888875
No 124
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=24.43 E-value=4.6e+02 Score=27.03 Aligned_cols=92 Identities=16% Similarity=0.261 Sum_probs=52.5
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHh-cCCCceeee--eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCC
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRR-ANVAFCSEP--IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKT 278 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~-~GVd~~~v~--~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~a 278 (479)
.++.++|+-| ..|+.+++.|.+ ..+....+. ......|..+. +.+. .+...+.....+.+.
T Consensus 6 ~~VaIvGATG--~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~------------~~~~--~l~v~~~~~~~~~~~ 69 (347)
T PRK06728 6 YHVAVVGATG--AVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQ------------FKGR--EIIIQEAKINSFEGV 69 (347)
T ss_pred CEEEEEeCCC--HHHHHHHHHHHHCCCCCcccEEEEECcccCCCCee------------eCCc--ceEEEeCCHHHhcCC
Confidence 3788888877 479999999994 667644221 11112222221 1111 122222222335678
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCC
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASD 317 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~ 317 (479)
|+++++. + .+...++...+.+.|+ +++|.++
T Consensus 70 Divf~a~-----~--~~~s~~~~~~~~~~G~-~VID~Ss 100 (347)
T PRK06728 70 DIAFFSA-----G--GEVSRQFVNQAVSSGA-IVIDNTS 100 (347)
T ss_pred CEEEECC-----C--hHHHHHHHHHHHHCCC-EEEECch
Confidence 9999862 3 3556677777777774 6778764
No 125
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=24.07 E-value=2.8e+02 Score=25.65 Aligned_cols=64 Identities=13% Similarity=0.080 Sum_probs=44.3
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHH
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEAR 347 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~ 347 (479)
+++++...|+.+ + .+.+..+.+.++++|+.|+.||.... .+.+.. +...++.+--.++...++.
T Consensus 22 d~~~I~T~Gs~i--~--~~~i~~i~~~~~~rgVIIfTDpD~~G--ekIRk~-i~~~vp~~khafi~~~~a~ 85 (174)
T TIGR00334 22 DVDVIETNGSAL--K--DETINLIKKAQKKQGVIILTDPDFPG--EKIRKK-IEQHLPGYENCFIPKHLAK 85 (174)
T ss_pred CceEEEECCCcc--C--HHHHHHHHHHhhcCCEEEEeCCCCch--HHHHHH-HHHHCCCCeEEeeeHHhcC
Confidence 589999998764 3 56666666677788999999985432 123333 3344577888888888875
No 126
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=23.76 E-value=5.9e+02 Score=26.90 Aligned_cols=59 Identities=19% Similarity=0.237 Sum_probs=33.8
Q ss_pred cCCcEEEEeccccCCcc-hHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcC
Q 011689 276 SKTNIFIVEGYLFELPD-TIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFAN 342 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~-~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N 342 (479)
.+.++|++.... .|. ...-+.++.+.++++|+.+++|-.-. .+.... .+.-.+|++..+
T Consensus 148 ~~TklV~~e~~~--np~g~v~Di~~I~~la~~~gi~livD~t~a--~~~~~~----pl~~GaD~vv~S 207 (433)
T PRK08134 148 PNTRLLFGETLG--NPGLEVLDIPTVAAIAHEAGVPLLVDSTFT--TPYLLR----PFEHGADLVYHS 207 (433)
T ss_pred CCCeEEEEECCC--cccCcccCHHHHHHHHHHcCCEEEEECCCc--ccccCC----chhcCCCEEEec
Confidence 356777776432 110 12336778888999999999996521 011111 111368887777
No 127
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=23.76 E-value=5.9e+02 Score=23.61 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=25.5
Q ss_pred hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEe
Q 011689 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVT 314 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D 314 (479)
.+.++++|+|+.+.. + ......+-+.+++.+++++.-
T Consensus 108 ~~~~~~~dvVi~~~d----~--~~~~~~ln~~c~~~~ip~i~~ 144 (198)
T cd01485 108 EEYLQKFTLVIATEE----N--YERTAKVNDVCRKHHIPFISC 144 (198)
T ss_pred HHHHhCCCEEEECCC----C--HHHHHHHHHHHHHcCCCEEEE
Confidence 445678999887632 1 455566778888888887663
No 128
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=23.27 E-value=2.1e+02 Score=28.48 Aligned_cols=41 Identities=10% Similarity=0.135 Sum_probs=28.6
Q ss_pred CCcEEEEecccc---CCcchHHHHHHHHHHHHhcCCEEEEeCCC
Q 011689 277 KTNIFIVEGYLF---ELPDTIRTITKACEVAHRSGALVAVTASD 317 (479)
Q Consensus 277 ~ad~v~i~g~~~---~~~~~~~~~~~~l~~ak~~g~~v~~D~~~ 317 (479)
...+|+++-..- ..+.+.+.+.++.+.|+++|+++.+|-..
T Consensus 124 ~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGAR 167 (290)
T PF01212_consen 124 QPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGAR 167 (290)
T ss_dssp GEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETT
T ss_pred CccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhh
Confidence 467888875432 22334788999999999999999999764
No 129
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=22.69 E-value=4.8e+02 Score=26.64 Aligned_cols=91 Identities=12% Similarity=0.167 Sum_probs=50.9
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeee--eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEP--IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~--~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~ 280 (479)
++.++|+-|. .|..+++.|.+.+.....+. ...... |++.. ..+. .+...+.....++++|+
T Consensus 6 ~IaIvGATG~--vG~eLlrlL~~~~hP~~~l~~v~s~~~a----------G~~l~--~~~~--~l~~~~~~~~~~~~vD~ 69 (336)
T PRK05671 6 DIAVVGATGT--VGEALVQILEERDFPVGTLHLLASSESA----------GHSVP--FAGK--NLRVREVDSFDFSQVQL 69 (336)
T ss_pred EEEEEccCCH--HHHHHHHHHhhCCCCceEEEEEECcccC----------CCeec--cCCc--ceEEeeCChHHhcCCCE
Confidence 6777777664 79999999997654433221 111111 22211 2221 12222222222478999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCC
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASD 317 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~ 317 (479)
+++. .| ......++..+.+.|+ .++|.++
T Consensus 70 vFla-----~p--~~~s~~~v~~~~~~G~-~VIDlS~ 98 (336)
T PRK05671 70 AFFA-----AG--AAVSRSFAEKARAAGC-SVIDLSG 98 (336)
T ss_pred EEEc-----CC--HHHHHHHHHHHHHCCC-eEEECch
Confidence 9996 23 3455668888877776 4788875
No 130
>PF05756 S-antigen: S-antigen protein; InterPro: IPR008825 S-antigens are heat stable proteins that are found in the blood of individuals infected with malaria [].
Probab=22.53 E-value=41 Score=26.49 Aligned_cols=30 Identities=27% Similarity=0.431 Sum_probs=15.1
Q ss_pred CCCCCCCcccccccCCCC-ccCCCCCCcccc
Q 011689 82 GDLGRDNYEEDDEAGDES-EADDDGDEYDEE 111 (479)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 111 (479)
+.-=+|+||+-+++.+.+ ++-+++.+.|+|
T Consensus 54 g~ky~dleee~egenddeedsnsees~ndee 84 (94)
T PF05756_consen 54 GQKYEDLEEEKEGENDDEEDSNSEESNNDEE 84 (94)
T ss_pred ccchhhHHHhccCCCcccccccchhcccccc
Confidence 445567777755554443 333444333333
No 131
>COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]
Probab=22.51 E-value=3.4e+02 Score=26.35 Aligned_cols=63 Identities=21% Similarity=0.262 Sum_probs=41.6
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHH-hcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEc----CHHHHHHh
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAH-RSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFA----NSDEARAF 349 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak-~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~----N~~Ea~~L 349 (479)
....|.+.+.|+. ... .+.+.++++..| +.+.++++-|++... +.+++|.+++ |-....++
T Consensus 39 ~~GTDaImIGGS~-gvt--~~~~~~~v~~ik~~~~lPvilfP~~~~~-----------is~~aDavff~svLNS~n~~~i 104 (240)
T COG1646 39 EAGTDAIMIGGSD-GVT--EENVDNVVEAIKERTDLPVILFPGSPSG-----------ISPYADAVFFPSVLNSDNPYWI 104 (240)
T ss_pred HcCCCEEEECCcc-ccc--HHHHHHHHHHHHhhcCCCEEEecCChhc-----------cCccCCeEEEEEEecCCCcccc
Confidence 3468999999874 222 466777888887 788999999886532 3356665432 55554444
Q ss_pred hC
Q 011689 350 CH 351 (479)
Q Consensus 350 ~g 351 (479)
.|
T Consensus 105 ~g 106 (240)
T COG1646 105 VG 106 (240)
T ss_pred cc
Confidence 44
No 132
>KOG3375 consensus Phosphoprotein/predicted coiled-coil protein [General function prediction only]
Probab=22.29 E-value=35 Score=30.33 Aligned_cols=17 Identities=47% Similarity=0.761 Sum_probs=15.3
Q ss_pred ccccccccccceEEEcc
Q 011689 48 RGGFMGKKGGGFLWVSP 64 (479)
Q Consensus 48 ~~~~~~~~~~~~~~~~~ 64 (479)
||-|.|+||+---+.||
T Consensus 3 rGkf~ghkgr~RqftSp 19 (174)
T KOG3375|consen 3 RGKFGGHKGRARQFTSP 19 (174)
T ss_pred CcccCCCCCcccccCCH
Confidence 68899999999889998
No 133
>PF04931 DNA_pol_phi: DNA polymerase phi; InterPro: IPR007015 Proteins of this family are predominantly nucleolar. The majority are described as transcription factor transactivators. The family also includes the fifth essential DNA polymerase (Pol5p) of Schizosaccharomyces pombe (Fission yeast) and Saccharomyces cerevisiae (Baker's yeast) (2.7.7.7 from EC). Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006351 transcription, DNA-dependent
Probab=22.21 E-value=55 Score=37.57 Aligned_cols=11 Identities=36% Similarity=0.640 Sum_probs=6.5
Q ss_pred hhhhhhhhhcc
Q 011689 31 KLQALVFRKFS 41 (479)
Q Consensus 31 ~~~~~~~~~~~ 41 (479)
++-..||+.|.
T Consensus 607 ~~~~~vf~~~~ 617 (784)
T PF04931_consen 607 KVSEQVFEAFC 617 (784)
T ss_pred HHHHHHHHHHH
Confidence 34456777664
No 134
>PF10911 DUF2717: Protein of unknown function (DUF2717); InterPro: IPR020121 The proteins in this entry are uncharacterised.
Probab=22.19 E-value=64 Score=25.42 Aligned_cols=19 Identities=26% Similarity=0.438 Sum_probs=15.7
Q ss_pred CccchhHHHHHHHHHHHHc
Q 011689 401 DTCGAGDAYASGILYGILR 419 (479)
Q Consensus 401 DttGAGDaF~Agfl~~l~~ 419 (479)
...|+.++|++||+.|+.-
T Consensus 45 r~~G~SE~~I~Gfl~Gl~~ 63 (77)
T PF10911_consen 45 RKQGWSESYILGFLAGLQY 63 (77)
T ss_pred HHccccHHHHHHHHHHHHH
Confidence 3469999999999999853
No 135
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=22.00 E-value=6.5e+02 Score=25.84 Aligned_cols=39 Identities=31% Similarity=0.359 Sum_probs=23.4
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
+.++|+++...... .....+.++.+.+++.|+.+++|-.
T Consensus 139 ~tklV~le~p~np~-g~~~dl~~I~~la~~~gi~livD~a 177 (380)
T TIGR01325 139 NTKLVFVETPSNPL-GELVDIAALAELAHAIGALLVVDNV 177 (380)
T ss_pred CceEEEEECCCCCC-CeeeCHHHHHHHHHHcCCEEEEECC
Confidence 45677765321100 0122356777778888999999864
No 136
>PRK15452 putative protease; Provisional
Probab=21.88 E-value=8.5e+02 Score=25.98 Aligned_cols=45 Identities=11% Similarity=0.050 Sum_probs=31.7
Q ss_pred hhhccCCcEEEEeccccCC-----cchHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 272 VNLISKTNIFIVEGYLFEL-----PDTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~-----~~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
..+-.+||.||+.+-.+.. +.+.+.+.++++.++++|+++++-++
T Consensus 18 aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~n 67 (443)
T PRK15452 18 YAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVVN 67 (443)
T ss_pred HHHHCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 3444689999996533221 12346788999999999999988754
No 137
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=21.82 E-value=6.9e+02 Score=23.63 Aligned_cols=22 Identities=32% Similarity=0.184 Sum_probs=19.3
Q ss_pred CceeecCchHHHHHHHHHHhCC
Q 011689 173 SYKAAAGGSLSNSLVALARLGG 194 (479)
Q Consensus 173 ~~~~~~GG~a~NvA~ala~LG~ 194 (479)
-...-.||.|..+|..|+++|.
T Consensus 24 VlivG~GglGs~va~~La~~Gv 45 (228)
T cd00757 24 VLVVGAGGLGSPAAEYLAAAGV 45 (228)
T ss_pred EEEECCCHHHHHHHHHHHHcCC
Confidence 3456789999999999999998
No 138
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=21.77 E-value=1.3e+02 Score=26.70 Aligned_cols=45 Identities=16% Similarity=0.198 Sum_probs=32.1
Q ss_pred hhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCC
Q 011689 269 PCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASD 317 (479)
Q Consensus 269 ~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~ 317 (479)
......+.++|+++++|.++- ..++.++++.+++....+++-|+.
T Consensus 54 ~~~~~~l~~aD~viiTGsTlv----N~Ti~~iL~~~~~~~~vil~GpS~ 98 (147)
T PF04016_consen 54 EDAEEILPWADVVIITGSTLV----NGTIDDILELARNAREVILYGPSA 98 (147)
T ss_dssp GGHHHHGGG-SEEEEECHHCC----TTTHHHHHHHTTTSSEEEEESCCG
T ss_pred HHHHHHHccCCEEEEEeeeee----cCCHHHHHHhCccCCeEEEEecCc
Confidence 445677899999999998764 245677888887666667777764
No 139
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=21.75 E-value=1.9e+02 Score=22.24 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHhCCCCCCCCCccEEEEEEeCC------CchHHHHHHHHHhcCCCcee
Q 011689 181 SLSNSLVALARLGGKPIGGPALNVAMTGSVGS------DPLGGFYRAKLRRANVAFCS 232 (479)
Q Consensus 181 ~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~------D~~G~~i~~~L~~~GVd~~~ 232 (479)
.|.=+|..|+++|. ++.++..-.. ....+.+.+.|++.||+...
T Consensus 10 ig~E~A~~l~~~g~--------~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~ 59 (80)
T PF00070_consen 10 IGIELAEALAELGK--------EVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHT 59 (80)
T ss_dssp HHHHHHHHHHHTTS--------EEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHhCc--------EEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEe
Confidence 36778889999998 8998875442 23577788999999998753
No 140
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=21.61 E-value=5e+02 Score=26.58 Aligned_cols=92 Identities=18% Similarity=0.269 Sum_probs=50.7
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeee-e-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEP-I-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~-~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~ 280 (479)
++.++|.-|. .|..+++.|.+.+.....+. . .....+..+.. .+ ..+...+...+.+.++|+
T Consensus 9 kVaVvGAtG~--vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~------------~~--~~~~v~~~~~~~~~~~D~ 72 (344)
T PLN02383 9 SVAIVGVTGA--VGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF------------EG--RDYTVEELTEDSFDGVDI 72 (344)
T ss_pred eEEEEcCCCh--HHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee------------cC--ceeEEEeCCHHHHcCCCE
Confidence 7888888774 79999999988654432221 1 11111211111 11 112222222334578999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCCh
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDV 318 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~ 318 (479)
++++ .| .+...++...+.+.|+ +++|.+..
T Consensus 73 vf~a-----~p--~~~s~~~~~~~~~~g~-~VIDlS~~ 102 (344)
T PLN02383 73 ALFS-----AG--GSISKKFGPIAVDKGA-VVVDNSSA 102 (344)
T ss_pred EEEC-----CC--cHHHHHHHHHHHhCCC-EEEECCch
Confidence 9986 23 3455666666666665 57888753
No 141
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=21.41 E-value=6.3e+02 Score=26.14 Aligned_cols=39 Identities=23% Similarity=0.282 Sum_probs=23.2
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
+.++|+++...... .....+.++.+.+++.|+.+++|-.
T Consensus 144 ~tklV~le~p~Np~-G~v~dl~~I~~la~~~gi~livD~a 182 (391)
T TIGR01328 144 NTKIVYFETPANPT-MKLIDMERVCRDAHSQGVKVIVDNT 182 (391)
T ss_pred CCeEEEEECCCCCC-CcccCHHHHHHHHHHcCCEEEEECC
Confidence 46677765321100 0122356777778888999999854
No 142
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=21.37 E-value=5.6e+02 Score=25.94 Aligned_cols=90 Identities=19% Similarity=0.172 Sum_probs=49.6
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCc---eeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAF---CSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~---~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad 279 (479)
++.++|.-|. .|+.+.+.|.+.+... ..+.. ....+..+.+ .+.. +... +.....+.++|
T Consensus 3 ~V~IvGAtG~--vG~~l~~lL~~~~hp~~~l~~l~s-~~~~g~~l~~---~g~~-i~v~----------d~~~~~~~~vD 65 (334)
T PRK14874 3 NVAVVGATGA--VGREMLNILEERNFPVDKLRLLAS-ARSAGKELSF---KGKE-LKVE----------DLTTFDFSGVD 65 (334)
T ss_pred EEEEECCCCH--HHHHHHHHHHhCCCCcceEEEEEc-cccCCCeeee---CCce-eEEe----------eCCHHHHcCCC
Confidence 6788888774 7999999999866543 22221 1112222211 1211 1111 11112245789
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCC
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASD 317 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~ 317 (479)
+++++. + .....++...+.+.|+ +++|.+.
T Consensus 66 vVf~A~-----g--~g~s~~~~~~~~~~G~-~VIDlS~ 95 (334)
T PRK14874 66 IALFSA-----G--GSVSKKYAPKAAAAGA-VVIDNSS 95 (334)
T ss_pred EEEECC-----C--hHHHHHHHHHHHhCCC-EEEECCc
Confidence 998862 2 3455566666666777 7889875
No 143
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=21.03 E-value=6.2e+02 Score=26.69 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=24.2
Q ss_pred CCcEEEEeccccCCc-chHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 277 KTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~-~~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
+.++|++... ..| .....+.++.+.++++|+.+++|-.
T Consensus 149 ~tklV~l~sp--~NPtG~v~di~~I~~la~~~gi~vIvD~t 187 (431)
T PRK08248 149 KTKALFAETI--GNPKGDVLDIEAVAAIAHEHGIPLIVDNT 187 (431)
T ss_pred CCeEEEEECC--CCCCCcccCHHHHHHHHHHcCCEEEEeCC
Confidence 4677887532 111 0122356777888899999999864
No 144
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]. ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.
Probab=20.66 E-value=1e+02 Score=32.87 Aligned_cols=29 Identities=31% Similarity=0.427 Sum_probs=16.5
Q ss_pred EEEeCCCCC-CCCCccchhHHHHHHHHHHH
Q 011689 389 AVYIPPSPC-VPVDTCGAGDAYASGILYGI 417 (479)
Q Consensus 389 ~~~vpa~~v-~vvDttGAGDaF~Agfl~~l 417 (479)
...+|..-+ +++-|+|.||++.|+=+++.
T Consensus 414 ~~~~P~lv~~~P~~TVGlGD~ISa~~f~~~ 443 (444)
T PF04587_consen 414 FCVIPVLVCKKPKSTVGLGDTISAGGFVYQ 443 (444)
T ss_dssp EEEEE-B--SS-S--TTHHHHHHHHHHHHH
T ss_pred EEEEeeEecCCCcccccCcchhhhhhHHhc
Confidence 444554443 57899999999988765543
No 145
>TIGR02491 NrdG anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin ) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer.
Probab=20.58 E-value=2.1e+02 Score=25.47 Aligned_cols=63 Identities=13% Similarity=0.005 Sum_probs=33.7
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhc-CCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEc
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRS-GALVAVTASDVTCIERHYDDFWEIVGNYADIVFA 341 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~-g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~ 341 (479)
..|.++|--+.+....+.+.++++.+++. +...+++.++..+.+.......+.+++++|+++-
T Consensus 65 ~gVt~sGGEPllq~~~~~l~~ll~~~k~~~~~~~~~~~tG~~~~~~~~~~~~~~~l~~~D~liD 128 (154)
T TIGR02491 65 DGLTLSGGDPLYPRNVEELIELVKKIKAEFPEKDIWLWTGYTWEEILEDEKHLEVLKYIDVLVD 128 (154)
T ss_pred CeEEEeChhhCCCCCHHHHHHHHHHHHHhCCCCCEEEeeCccHHHHhcchhHHHHHhhCCEEEe
Confidence 45666664333322247888899988876 5554444444322111111112357789997643
No 146
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=20.12 E-value=5.3e+02 Score=26.80 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=23.1
Q ss_pred CCcEEEEeccccCCcc-hHHHHHHHHHHHHhcCCEEEEeCC
Q 011689 277 KTNIFIVEGYLFELPD-TIRTITKACEVAHRSGALVAVTAS 316 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~-~~~~~~~~l~~ak~~g~~v~~D~~ 316 (479)
+.++|+++... .|. ....+.++.+.+++.|+.+++|-.
T Consensus 149 ~tklV~ie~p~--NPtg~v~dl~~I~~la~~~gi~livD~t 187 (398)
T PRK08249 149 GCDLLYLETPT--NPTLKIVDIERLAAAAKKVGALVVVDNT 187 (398)
T ss_pred CCeEEEEECCC--CCCCccCCHHHHHHHHHHcCCEEEEECC
Confidence 46777764321 110 112256677778889999999864
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.07 E-value=7.6e+02 Score=23.49 Aligned_cols=91 Identities=20% Similarity=0.177 Sum_probs=51.9
Q ss_pred ecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEE
Q 011689 177 AAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAML 256 (479)
Q Consensus 177 ~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~ 256 (479)
..|....+.|..||+|.. +|.-+=.+. ...+.-++.|+..|+.--.+.. .||..-
T Consensus 78 EIGtGsGY~aAvla~l~~--------~V~siEr~~--~L~~~A~~~L~~lg~~nV~v~~-------------gDG~~G-- 132 (209)
T COG2518 78 EIGTGSGYQAAVLARLVG--------RVVSIERIE--ELAEQARRNLETLGYENVTVRH-------------GDGSKG-- 132 (209)
T ss_pred EECCCchHHHHHHHHHhC--------eEEEEEEcH--HHHHHHHHHHHHcCCCceEEEE-------------CCcccC--
Confidence 344444445556788877 565555543 3666777788888874311111 233221
Q ss_pred EecCCCCCCCCChhhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEE
Q 011689 257 AYQGTSSTINYDPCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAV 313 (479)
Q Consensus 257 ~~~ga~~~l~~~~~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~ 313 (479)
++ ....+|.+++++.....| ..+++..+..|..|+.
T Consensus 133 -~~--------------~~aPyD~I~Vtaaa~~vP------~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 133 -WP--------------EEAPYDRIIVTAAAPEVP------EALLDQLKPGGRLVIP 168 (209)
T ss_pred -CC--------------CCCCcCEEEEeeccCCCC------HHHHHhcccCCEEEEE
Confidence 11 013578888888777776 4566666776665544
Done!