Query 011689
Match_columns 479
No_of_seqs 309 out of 1684
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 13:19:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3a_A Sugar kinase protein; s 100.0 5.2E-49 1.8E-53 401.8 36.1 321 121-456 24-348 (352)
2 3otx_A Adenosine kinase, putat 100.0 6.7E-48 2.3E-52 392.2 33.8 316 118-446 3-339 (347)
3 3vas_A Putative adenosine kina 100.0 4.5E-48 1.5E-52 397.5 31.2 321 120-455 22-365 (370)
4 3uq6_A Adenosine kinase, putat 100.0 4.7E-47 1.6E-51 390.1 30.0 323 124-458 28-370 (372)
5 3loo_A Anopheles gambiae adeno 100.0 6.2E-47 2.1E-51 388.2 30.3 315 120-447 21-356 (365)
6 3ljs_A Fructokinase; fructokia 100.0 7E-47 2.4E-51 383.3 25.6 312 119-464 1-332 (338)
7 3iq0_A Putative ribokinase II; 100.0 1.3E-45 4.5E-50 372.9 31.2 316 122-472 3-324 (330)
8 3pl2_A Sugar kinase, ribokinas 100.0 3.5E-45 1.2E-49 367.6 31.5 306 119-461 5-318 (319)
9 3ktn_A Carbohydrate kinase, PF 100.0 1.2E-44 4.2E-49 367.8 33.8 308 122-464 2-335 (346)
10 3go6_A Ribokinase RBSK; phosph 100.0 2.8E-45 9.7E-50 367.8 28.6 289 116-461 13-305 (310)
11 1bx4_A Protein (adenosine kina 100.0 2E-44 6.9E-49 366.1 32.8 309 121-445 5-337 (345)
12 4du5_A PFKB; structural genomi 100.0 1.4E-44 4.9E-49 366.4 31.3 302 119-457 23-334 (336)
13 2rbc_A Sugar kinase, AGR_C_456 100.0 3.4E-44 1.2E-48 364.9 32.6 295 121-460 28-328 (343)
14 1rkd_A Ribokinase; carbohydrat 100.0 1.2E-44 4E-49 362.2 28.7 300 120-460 2-307 (309)
15 2qcv_A Putative 5-dehydro-2-de 100.0 8.1E-44 2.8E-48 359.6 35.0 309 120-461 9-326 (332)
16 3ry7_A Ribokinase; transferase 100.0 3.2E-45 1.1E-49 365.2 24.3 295 122-456 2-303 (304)
17 3h49_A Ribokinase; transferase 100.0 3.6E-44 1.2E-48 361.7 32.1 312 120-465 3-319 (325)
18 3ikh_A Carbohydrate kinase; tr 100.0 3.2E-45 1.1E-49 365.3 23.1 286 123-464 3-292 (299)
19 2abs_A Adenosine kinase, AK; r 100.0 1E-43 3.5E-48 366.4 34.4 314 119-446 29-376 (383)
20 1v1a_A 2-keto-3-deoxygluconate 100.0 9.3E-44 3.2E-48 355.8 32.9 297 123-461 2-304 (309)
21 3hj6_A Fructokinase, FRK; fruc 100.0 1.3E-45 4.6E-50 372.4 17.9 303 121-459 20-326 (327)
22 3kzh_A Probable sugar kinase; 100.0 4.4E-44 1.5E-48 361.5 26.9 302 118-461 2-310 (328)
23 2c4e_A Sugar kinase MJ0406; tr 100.0 5.3E-44 1.8E-48 356.7 26.9 293 122-460 5-299 (302)
24 2v78_A Fructokinase; transfera 100.0 2.7E-43 9.1E-48 353.2 30.3 297 123-460 2-310 (313)
25 1tyy_A Putative sugar kinase; 100.0 6E-44 2.1E-48 362.4 24.3 296 121-461 23-330 (339)
26 3ewm_A Uncharacterized sugar k 100.0 5.1E-43 1.7E-47 351.3 29.6 297 123-466 2-306 (313)
27 4e69_A 2-dehydro-3-deoxyglucon 100.0 1.7E-42 5.7E-47 350.2 32.5 289 116-447 17-318 (328)
28 2fv7_A Ribokinase; structural 100.0 1.2E-43 4.1E-48 358.9 23.3 297 120-456 22-328 (331)
29 2nwh_A AGR_C_3442P, carbohydra 100.0 1E-42 3.4E-47 349.9 29.6 298 123-460 4-307 (317)
30 2dcn_A Hypothetical fructokina 100.0 9E-43 3.1E-47 348.8 28.5 296 123-460 2-308 (311)
31 1vm7_A Ribokinase; TM0960, str 100.0 1.5E-42 5.3E-47 347.8 29.6 290 123-459 15-309 (311)
32 2pkf_A Adenosine kinase; trans 100.0 4.4E-42 1.5E-46 347.9 30.2 311 118-462 6-321 (334)
33 3b1n_A Ribokinase, putative; r 100.0 6.9E-42 2.4E-46 345.4 30.5 305 124-464 2-309 (326)
34 3ie7_A LIN2199 protein; phosph 100.0 1.4E-41 4.8E-46 341.7 32.3 291 124-460 4-303 (320)
35 3lhx_A Ketodeoxygluconokinase; 100.0 3.2E-42 1.1E-46 346.4 27.3 282 122-447 4-305 (319)
36 4gm6_A PFKB family carbohydrat 100.0 1.2E-40 4.2E-45 339.0 31.2 306 122-462 24-346 (351)
37 2jg1_A Tagatose-6-phosphate ki 100.0 6.7E-41 2.3E-45 338.7 28.8 291 123-460 21-324 (330)
38 3umo_A 6-phosphofructokinase i 100.0 2.8E-40 9.7E-45 330.4 32.9 290 125-460 4-306 (309)
39 3cqd_A 6-phosphofructokinase i 100.0 2.2E-40 7.4E-45 331.3 30.8 291 124-460 3-306 (309)
40 2f02_A Tagatose-6-phosphate ki 100.0 2.2E-40 7.7E-45 333.6 30.7 294 123-460 3-307 (323)
41 2afb_A 2-keto-3-deoxygluconate 100.0 4.4E-40 1.5E-44 335.1 32.7 305 121-460 11-343 (351)
42 2qhp_A Fructokinase; NP_810670 100.0 1.9E-40 6.4E-45 329.5 28.7 278 123-449 4-288 (296)
43 2ajr_A Sugar kinase, PFKB fami 100.0 9.6E-41 3.3E-45 337.5 25.4 295 122-460 12-324 (331)
44 2hlz_A Ketohexokinase; non-pro 100.0 6.6E-40 2.3E-44 328.7 29.5 280 120-445 15-309 (312)
45 3bf5_A Ribokinase related prot 100.0 4.8E-41 1.6E-45 336.4 20.3 282 120-462 18-302 (306)
46 4e84_A D-beta-D-heptose 7-phos 100.0 2.7E-40 9.4E-45 337.3 25.4 292 121-455 52-351 (352)
47 3kd6_A Carbohydrate kinase, PF 100.0 2.1E-39 7E-44 325.3 29.6 290 123-466 3-303 (313)
48 2abq_A Fructose 1-phosphate ki 100.0 5.1E-39 1.7E-43 321.0 31.3 286 125-460 3-297 (306)
49 2jg5_A Fructose 1-phosphate ki 100.0 1.7E-38 5.9E-43 316.8 32.4 287 124-460 2-297 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 1.2E-36 4E-41 303.2 20.4 270 125-454 14-292 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 7E-23 2.4E-27 204.9 12.8 216 203-441 12-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 2.8E-22 9.5E-27 197.7 14.3 217 206-443 26-268 (283)
53 1jxh_A Phosphomethylpyrimidine 99.8 2.9E-20 9.9E-25 184.0 13.9 159 278-442 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.8 2.4E-18 8.1E-23 167.0 17.3 160 277-442 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.7 3.7E-17 1.3E-21 159.8 17.5 160 277-442 74-250 (271)
56 3pzs_A PM kinase, pyridoxamine 99.7 1.9E-17 6.5E-22 163.9 14.6 164 276-442 76-260 (289)
57 3mbh_A Putative phosphomethylp 99.7 1.2E-16 4E-21 158.4 16.9 162 277-442 77-259 (291)
58 3h74_A Pyridoxal kinase; PSI-I 99.7 1.4E-16 4.7E-21 157.2 15.9 159 277-442 74-249 (282)
59 3zs7_A Pyridoxal kinase; trans 99.7 1.1E-15 3.9E-20 151.9 18.0 162 276-442 75-262 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.5 2.5E-13 8.4E-18 133.2 15.1 164 272-440 53-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.5 5.5E-13 1.9E-17 143.1 15.7 159 277-439 91-273 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.1 3.7E-10 1.3E-14 110.1 13.4 157 272-434 51-220 (265)
63 3dzv_A 4-methyl-5-(beta-hydrox 98.9 6.1E-08 2.1E-12 94.5 18.6 160 270-434 51-229 (273)
64 2r3b_A YJEF-related protein; p 98.9 5.7E-09 1.9E-13 103.8 10.1 172 273-464 107-291 (310)
65 3bgk_A SMU.573, putative uncha 98.9 1.3E-08 4.5E-13 101.2 12.5 173 273-462 121-306 (311)
66 3rss_A Putative uncharacterize 98.8 7.6E-08 2.6E-12 101.7 17.1 178 272-463 315-498 (502)
67 3rpz_A ADP/ATP-dependent NAD(P 98.7 1.3E-07 4.4E-12 92.6 15.2 174 275-464 96-277 (279)
68 3drw_A ADP-specific phosphofru 98.7 2.7E-06 9.3E-11 88.3 22.2 226 113-352 18-319 (474)
69 3nl6_A Thiamine biosynthetic b 98.2 2.6E-05 8.8E-10 83.0 17.8 156 271-433 299-494 (540)
70 3hpd_A Hydroxyethylthiazole ki 98.1 3.6E-05 1.2E-09 74.4 14.2 154 272-432 51-218 (265)
71 1gc5_A ADP-dependent glucokina 98.1 0.0003 1E-08 73.0 21.6 209 124-350 32-313 (467)
72 1l2l_A ADP-dependent glucokina 98.1 6.9E-05 2.3E-09 77.7 15.7 209 124-349 27-302 (457)
73 1ua4_A Glucokinase, ADP-depend 98.0 9.6E-05 3.3E-09 76.7 16.0 161 177-352 109-302 (455)
74 3k5w_A Carbohydrate kinase; 11 96.9 0.013 4.5E-07 61.1 15.3 166 276-460 291-466 (475)
75 3ost_A Serine/threonine-protei 50.1 4.9 0.00017 33.7 1.0 21 24-44 3-23 (128)
76 3can_A Pyruvate-formate lyase- 30.0 2.5E+02 0.0087 23.7 9.6 66 279-352 5-76 (182)
77 1y8q_A Ubiquitin-like 1 activa 24.2 4.2E+02 0.014 25.6 10.4 22 174-195 40-61 (346)
78 2bp3_S Platelet glycoprotein I 23.0 34 0.0012 19.7 1.2 12 55-66 9-20 (26)
79 1vrm_A Hypothetical protein TM 22.9 13 0.00044 36.4 -1.0 15 22-36 6-20 (325)
80 3ach_A Beta-1,4-endoglucanase; 21.6 48 0.0016 29.1 2.4 51 23-74 5-55 (203)
No 1
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=5.2e-49 Score=401.76 Aligned_cols=321 Identities=29% Similarity=0.442 Sum_probs=283.4
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
++++|+|+|++++|++..++..|++++++++|...+++.+.+..+...+. .....+||++.|+|++|++||.
T Consensus 24 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~--~~~~~~GG~~~N~A~~la~LG~------ 95 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--PALEASGGSAGNTAAGVANLGG------ 95 (352)
T ss_dssp CSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC--SCEEEECCHHHHHHHHHHHHTC------
T ss_pred CcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh--hccEecCCHHHHHHHHHHHcCC------
Confidence 46789999999999999999999999999999999998877777665542 5578999999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCc
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad 279 (479)
++.++|.||+|.+|+++++.|++.||+++++.+. +.+|+.++++++++|+|+++.+.+++..++++++....+++++
T Consensus 96 --~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~~~~~~~~ 173 (352)
T 4e3a_A 96 --KAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVADAK 173 (352)
T ss_dssp --CEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHHTEE
T ss_pred --CeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCHHHHhhCC
Confidence 8999999999999999999999999999988754 4589999999999999999999998888888888778889999
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc--cCcEEEcCHHHHHHhhCCCCCCc
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN--YADIVFANSDEARAFCHFSSKES 357 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea~~L~g~~~~~~ 357 (479)
++|++|+.+..+...+.+.++++.++++|.++++|+++....... .+.+..+++ ++|++++|++|++.|++. ++
T Consensus 174 ~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~-~~~l~~ll~~~~~dil~~N~~Ea~~l~g~---~~ 249 (352)
T 4e3a_A 174 VTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRY-RGEFLDLMRSGKVDIVFANRQEALSLYQT---DD 249 (352)
T ss_dssp EEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHH-HHHHHHHHHTTSCCEEEEEHHHHHHHTTC---SC
T ss_pred EEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHH-HHHHHHHhcccCCcEEEeCHHHHHHHhCC---CC
Confidence 999999975444457889999999999999999999876554433 344556777 899999999999999985 35
Q ss_pred HHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCC-CCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011689 358 PESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCV-PVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAA 436 (479)
Q Consensus 358 ~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa 436 (479)
.+.+.+.+..+++.||||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 250 ~~~a~~~l~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~-l~~a~~~A~~aAa 328 (352)
T 4e3a_A 250 FEEALNRIAADCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-LEDCGKLGCLAAG 328 (352)
T ss_dssp HHHHHHHHHHHSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHH
Confidence 66666666668999999999999999999999999999986 899999999999999999999998 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHH
Q 011689 437 TVVGQQGTRLSVRHASELAE 456 (479)
Q Consensus 437 ~~v~~~G~~~~~p~~~el~~ 456 (479)
.+|++.|+.+..|..+.+++
T Consensus 329 ~~v~~~G~~~~~~~~~~~~~ 348 (352)
T 4e3a_A 329 IVIQQIGPRPMTSLSEAAKQ 348 (352)
T ss_dssp HHTTSSSSSCSSCHHHHHHH
T ss_pred HHHcCCCCCCCcCHHHHHHH
Confidence 99999999998887776654
No 2
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=6.7e-48 Score=392.22 Aligned_cols=316 Identities=21% Similarity=0.332 Sum_probs=267.4
Q ss_pred CCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHh----C
Q 011689 118 VLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL----G 193 (479)
Q Consensus 118 ~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~L----G 193 (479)
|+.++++|+++|++++|++..++.+|++++++++|...+++..+.....+...+..+...+||++.|+|++|++| |
T Consensus 3 m~~~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G 82 (347)
T 3otx_A 3 MASAPLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYK 82 (347)
T ss_dssp ---CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGT
T ss_pred CCcCCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCC
Confidence 445778899999999999999999999999999999999984444444444455688999999999999999999 8
Q ss_pred CCCCCCCCcc-EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh-
Q 011689 194 GKPIGGPALN-VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL- 271 (479)
Q Consensus 194 ~~~~~~~~~~-v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~- 271 (479)
. + +.|+|.||+|.+|+.+++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..++++++.
T Consensus 83 ~--------~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~ 153 (347)
T 3otx_A 83 G--------KFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRS 153 (347)
T ss_dssp T--------SSEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTS
T ss_pred C--------CeEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCc
Confidence 8 7 999999999999999999999999999988766679999999998 8999999999888777776554
Q ss_pred ---hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHH
Q 011689 272 ---VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARA 348 (479)
Q Consensus 272 ---~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~ 348 (479)
.+.+++++++|++|+.+..+ .+.+.++++.++++|+++++|++...+.. .+.+.+..+++++|++++|++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~~~~-~~~~~l~~~l~~~dil~~N~~Ea~~ 230 (347)
T 3otx_A 154 PAVVRAMDESRIFYFSGFTLTVD--VNHVLQACRKAREVDGLFMINLSAPFIMQ-FFSAQLGEVLPYTDIIVANRHEAKE 230 (347)
T ss_dssp HHHHHHHHHCSEEEEEGGGGGTC--HHHHHHHHHHHHHTTCEEEEECCCHHHHH-HCHHHHHHHGGGCSEEEEEHHHHHH
T ss_pred hhhHHHHhhCCEEEEeeeecccC--HHHHHHHHHHHHHhCCEEEeeCchhhhHH-HHHHHHHHHHhhCCEEecCHHHHHH
Confidence 35678999999999987655 68889999999999999999998654432 2345566788999999999999999
Q ss_pred hhCCC--CCCcHHHHHH-HH------hcCCCEEEEeecCCCeEEEECCeEEEeCCCCC---CCCCccchhHHHHHHHHHH
Q 011689 349 FCHFS--SKESPESTTR-YL------SHFVPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYASGILYG 416 (479)
Q Consensus 349 L~g~~--~~~~~~~a~~-~l------~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~ 416 (479)
|++.. ..++.+.+.+ +. ..+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++
T Consensus 231 l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~ 310 (347)
T 3otx_A 231 FANMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSA 310 (347)
T ss_dssp HHHHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHH
T ss_pred HhcccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHH
Confidence 98742 2245555554 44 26899999999999999999999899999887 7899999999999999999
Q ss_pred HHcCCChHHHHHHHHHHHHHHHhcccCCCC
Q 011689 417 ILRGVSDLKGMGALAARIAATVVGQQGTRL 446 (479)
Q Consensus 417 l~~g~~~l~eAl~~A~a~Aa~~v~~~G~~~ 446 (479)
|++|++ +++|+++|+++|+.+|++.|+..
T Consensus 311 l~~g~~-l~~a~~~a~~~aa~~v~~~G~~~ 339 (347)
T 3otx_A 311 YAVGKD-LRRCCETGHYTAQEVIQRDGCSF 339 (347)
T ss_dssp HTTTCC-HHHHHHHHHHHHHHHHTCC----
T ss_pred HHcCCC-HHHHHHHHHHHHHHHHcccCCCC
Confidence 999998 99999999999999999999763
No 3
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=4.5e-48 Score=397.45 Aligned_cols=321 Identities=19% Similarity=0.253 Sum_probs=273.9
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHh---CCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL---GGKP 196 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~L---G~~~ 196 (479)
+++.+|+|+|++++|++..++.+|++++++++|...+++.+.....-+.+.+..+...+||+++|+|++|++| |.
T Consensus 22 m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~-- 99 (370)
T 3vas_A 22 LSEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPF-- 99 (370)
T ss_dssp CCTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTT--
T ss_pred cCCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCC--
Confidence 3457899999999999999999999999999999999964444444444455688999999999999999999 98
Q ss_pred CCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh---
Q 011689 197 IGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--- 272 (479)
Q Consensus 197 ~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~--- 272 (479)
++.|+|.||+|.+|+++++.|++.||++.++.. .+.+|+.++++++ +|+|+++.++|++..++++++..
T Consensus 100 ------~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~~ 172 (370)
T 3vas_A 100 ------VCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHV 172 (370)
T ss_dssp ------CEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHH
T ss_pred ------cEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchhh
Confidence 899999999999999999999999999998876 5679999999998 89999999999887787766543
Q ss_pred -hhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 273 -NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 273 -~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
+.+.++++||++|+.+..+ .+.+.++++.++++|+++++|++...+. ....+.+..+++++|++++|++|++.|++
T Consensus 173 ~~~~~~~~~v~~~g~~~~~~--~~~~~~~~~~a~~~g~~v~ld~~~~~~~-~~~~~~l~~ll~~~dil~~N~~Ea~~l~g 249 (370)
T 3vas_A 173 WSLVEKAQVYYIAGFVINTC--YEGMLKIAKHSLENEKLFCFNLSAPFLS-QFNTKEVDEMISYSNIVFGNESEAEAYGE 249 (370)
T ss_dssp HHHHHHCSEEEEEGGGHHHH--HHHHHHHHHHHHHTTCEEEEECCCHHHH-HHCHHHHHHHHTTCSEEEEEHHHHHHHHH
T ss_pred HHHHhhCCEEEEEeeeccCC--HHHHHHHHHHHHHcCCEEEEECCcHHHH-HHHHHHHHHHHhhCCEEEcCHHHHHHHhc
Confidence 5678999999999876543 6788999999999999999999765433 22344566788999999999999999988
Q ss_pred CCC--CCcHHHHHH-HHhc-------CCCEEEEeecCCCeEEEE--CCeEEEeCCCCC---CCCCccchhHHHHHHHHHH
Q 011689 352 FSS--KESPESTTR-YLSH-------FVPLVSVTDGARGSYIGV--KGEAVYIPPSPC---VPVDTCGAGDAYASGILYG 416 (479)
Q Consensus 352 ~~~--~~~~~~a~~-~l~~-------g~~~VVVT~G~~Ga~~~~--~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~ 416 (479)
... .++++++.+ +.+. +++.||||+|++|+++++ +++.+++|++++ +++|||||||+|+|||+++
T Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~ 329 (370)
T 3vas_A 250 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIAD 329 (370)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHH
T ss_pred ccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHH
Confidence 532 245555544 4443 899999999999999999 888889999987 8999999999999999999
Q ss_pred HHcCCChHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 011689 417 ILRGVSDLKGMGALAARIAATVVGQQGTRLSVRHASELA 455 (479)
Q Consensus 417 l~~g~~~l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~ 455 (479)
|++|++ +++|+++|+++|+.+|++.|+. +|+.+++.
T Consensus 330 l~~g~~-l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 330 YIRGKP-MITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp HTTTCC-HHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred HHCCCC-HHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 999998 9999999999999999999986 56665553
No 4
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=4.7e-47 Score=390.09 Aligned_cols=323 Identities=20% Similarity=0.287 Sum_probs=263.1
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
.|++|||+++|++..++++|++++++++|..++++.++...+.+..........+||+++|+|+++++||.+ ...
T Consensus 28 ~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~-----~~~ 102 (372)
T 3uq6_A 28 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQK-----PFV 102 (372)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCS-----TTS
T ss_pred eEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCC-----CCc
Confidence 499999999999999999999999999999999985544333333444577889999999999999999972 125
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEEEECCCCCeEEEEecCCCCCCCCChhh----hhhccCC
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL----VNLISKT 278 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~----~~~l~~a 278 (479)
+.|+|+||+|.+|+++++.|++.||+++++...+ .+|+.++++++ +|+|+++.+.|++..++++++. ...++++
T Consensus 103 ~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a 181 (372)
T 3uq6_A 103 CSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKA 181 (372)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHC
T ss_pred EEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhhHHHHhhcc
Confidence 9999999999999999999999999999876554 47888888776 8999999999998888776553 3567889
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC--CC
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS--KE 356 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~--~~ 356 (479)
+++|++||.+.. ..+.+.++++.+++++.++++|++++.+.. .+.+.+..+++++|++++|++|++.|++... .+
T Consensus 182 ~~~~~~g~~~~~--~~~~~~~~~~~a~~~g~~v~ldls~~~~~~-~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~ 258 (372)
T 3uq6_A 182 QVYYIAGFVINT--CYEGMLKIAKHSLENEKLFCFNLSAPFLSQ-FNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLED 258 (372)
T ss_dssp SEEEEEGGGHHH--HHHHHHHHHHHHHHTTCEEEEECCCHHHHH-HCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSS
T ss_pred cEEEEecccccc--cHHHHHHHHHHHHHcCCeEeeccccchhhh-hhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchh
Confidence 999999987543 367888999999999999999998765543 3345566788999999999999999987542 33
Q ss_pred cHHHHHHHHh--------cCCCEEEEeecCCCeEEEECCe----EEEeCCCC-CCCCCccchhHHHHHHHHHHHHcCCCh
Q 011689 357 SPESTTRYLS--------HFVPLVSVTDGARGSYIGVKGE----AVYIPPSP-CVPVDTCGAGDAYASGILYGILRGVSD 423 (479)
Q Consensus 357 ~~~~a~~~l~--------~g~~~VVVT~G~~Ga~~~~~~~----~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~ 423 (479)
+.+.+.+.+. .+.+.||||+|++|++++.++. .+.+++.+ .++||||||||+|+|||+++|++|++
T Consensus 259 ~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~- 337 (372)
T 3uq6_A 259 TVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP- 337 (372)
T ss_dssp HHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-
T ss_pred HHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCC-
Confidence 4555544332 3578899999999999987653 34445544 47899999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011689 424 LKGMGALAARIAATVVGQQGTRLSVRHASELAESF 458 (479)
Q Consensus 424 l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l 458 (479)
+++|+++|+++|+.+|++.|++ +|+++++.-.+
T Consensus 338 l~~a~~~a~~aAa~vv~~~Ga~--lp~r~~~~lkl 370 (372)
T 3uq6_A 338 MITSLHAAVKAAAYIICRSGFS--LGSRDSYSLKI 370 (372)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSC--CCCGGGCC---
T ss_pred HHHHHHHHHHHHHHHHcCCCCC--CCChhHHHHHh
Confidence 9999999999999999999986 56766654333
No 5
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=6.2e-47 Score=388.15 Aligned_cols=315 Identities=20% Similarity=0.285 Sum_probs=261.6
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHh---CCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL---GGKP 196 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~L---G~~~ 196 (479)
+++.+|+++|++++|++..++..|++++++++|...+.+..+....-+.+........+||++.|+|+++++| |.
T Consensus 21 ~~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~-- 98 (365)
T 3loo_A 21 LRDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPR-- 98 (365)
T ss_dssp CCTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTT--
T ss_pred CCCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCC--
Confidence 3556899999999999999999999999999999988653222222222223367899999999999999987 78
Q ss_pred CCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh----
Q 011689 197 IGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV---- 272 (479)
Q Consensus 197 ~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~---- 272 (479)
++.++|.||+|.+|+.+++.|++.||++.++...+.+|++++++++ +++|+++.+++++..++++++..
T Consensus 99 ------~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~~~~~~~~~~ 171 (365)
T 3loo_A 99 ------TAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT-GTQRSLCANLAAANDFTPEHLRSDGNR 171 (365)
T ss_dssp ------SEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE-TTEEEEEEECGGGGGCCGGGGGSHHHH
T ss_pred ------cEEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE-CCceEEEeccchHhhCCHhHcCchhhH
Confidence 8999999999999999999999999999998876679999999998 78999999999888888776542
Q ss_pred hhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 273 NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
..+.+++++|++||.+..+ .+.+.++++.++++|+++++|++...+. ....+.+..+++++|++++|++|++.|++.
T Consensus 172 ~~~~~~~~v~i~G~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~~~-~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~ 248 (365)
T 3loo_A 172 AYLQGAQFFYVSGFFFTVS--FESALSVAKEAAATGRMFMMNLSAPFVP-QFYKNNLEEIFPYVDVLFGNETEAIALAKE 248 (365)
T ss_dssp HHHHHCSEEEEEGGGHHHH--HHHHHHHHHHHHHTTCEEEEECCSTHHH-HHCHHHHHHHGGGCSEEEEEHHHHHHHHHH
T ss_pred HHHhhCCEEEEeeeeccCC--HHHHHHHHHHHHHcCCEEEEECCchhhh-HHHHHHHHHHHHhCCEEecCHHHHHHHhcc
Confidence 5678999999999876533 6788999999999999999999755443 233455667789999999999999999875
Q ss_pred C--CCCcHHHHHH-HHhc------CCCEEEEeecCCCeEEE--ECCeEEEeCCCCC---CCCCccchhHHHHHHHHHHHH
Q 011689 353 S--SKESPESTTR-YLSH------FVPLVSVTDGARGSYIG--VKGEAVYIPPSPC---VPVDTCGAGDAYASGILYGIL 418 (479)
Q Consensus 353 ~--~~~~~~~a~~-~l~~------g~~~VVVT~G~~Ga~~~--~~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~l~ 418 (479)
. ..++++.+.+ +... +++.||||+|++|++++ .+++.+++|++++ +++|||||||+|+|||+++|+
T Consensus 249 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~ 328 (365)
T 3loo_A 249 FNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLL 328 (365)
T ss_dssp TTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHH
Confidence 3 2345655554 4442 88999999999999999 6778889999987 899999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHhcccCCCCC
Q 011689 419 RGVSDLKGMGALAARIAATVVGQQGTRLS 447 (479)
Q Consensus 419 ~g~~~l~eAl~~A~a~Aa~~v~~~G~~~~ 447 (479)
+|++ +++|+++|+++|+.+|++.|++.+
T Consensus 329 ~g~~-l~~a~~~a~~~Aa~~v~~~G~~~p 356 (365)
T 3loo_A 329 QSRT-VDVCIKCGIWAAREIIQRSGCTFE 356 (365)
T ss_dssp TTCC-HHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred CCCC-HHHHHHHHHHHHHHHHcCCCCCCC
Confidence 9998 999999999999999999998753
No 6
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=7e-47 Score=383.33 Aligned_cols=312 Identities=21% Similarity=0.191 Sum_probs=246.2
Q ss_pred CCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCC
Q 011689 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (479)
Q Consensus 119 ~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~ 198 (479)
|+++++|+|+|++++|++...+. +|. + ...+...+||+++|+|++|++||.
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~~-----~~~--------------~------~~~~~~~~GG~~~NvA~~la~LG~---- 51 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPLV-----KKG--------------M------PRAFLQCAGGAPANVAVAVARLGG---- 51 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCCS-----STT--------------S------CCCEEEEEECHHHHHHHHHHHHTC----
T ss_pred CCCCCCEEEEChhhhheeccCCC-----Ccc--------------c------hhceeecCCChHHHHHHHHHhCCC----
Confidence 45677899999999999998653 110 0 236788999999999999999999
Q ss_pred CCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEec--CCCCCCCCChhhhhhc
Q 011689 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLI 275 (479)
Q Consensus 199 ~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~--ga~~~l~~~~~~~~~l 275 (479)
++.++|.||+|.+|+++++.|++.||+++++.+ .+.+|+.+++.++++|+|++..+. +++..++++++....+
T Consensus 52 ----~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~ 127 (338)
T 3ljs_A 52 ----AVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASF 127 (338)
T ss_dssp ----CEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHH
T ss_pred ----CEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHh
Confidence 899999999999999999999999999998875 556899999999988999987765 5555677777766678
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhh---hhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTC---IERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~---~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
++++++|++++.+..+...+.+.++++.+++.|.++++|++.... ......+.++.+++++|++++|++|++.|++.
T Consensus 128 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 207 (338)
T 3ljs_A 128 SDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANT 207 (338)
T ss_dssp HTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHH
T ss_pred cCCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCC
Confidence 899999999986644444688999999999999999999963210 01122455667889999999999999999986
Q ss_pred CCCCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcC------------
Q 011689 353 SSKESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRG------------ 420 (479)
Q Consensus 353 ~~~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g------------ 420 (479)
...+..+.+.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|
T Consensus 208 ~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~ 287 (338)
T 3ljs_A 208 LAADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCH 287 (338)
T ss_dssp HTSCHHHHHHHHTTTTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHT
T ss_pred CChhHHHHHHHHHhcCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhcccc
Confidence 43332224556667799999999999999999999999999999999999999999999999999999
Q ss_pred --CChHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHccccc
Q 011689 421 --VSDLKGMGALAARIAATVVGQQGTRLSVRHASELAESFAYRIKS 464 (479)
Q Consensus 421 --~~~l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~~~ 464 (479)
++ +++|+++|+++|+++|++.|+..++|+.+|++++++++.+.
T Consensus 288 ~~~~-l~~al~~A~~~aa~~v~~~Ga~~~~p~~~ev~~~~~~~~~~ 332 (338)
T 3ljs_A 288 DPES-IVSTLRFAAAVGALAVTRQGAFTAMPMLSEVLSLIQEQSEG 332 (338)
T ss_dssp CHHH-HHHHHHHHHHHHGGGC----CCCCTTHHHHHHHHHHHHHC-
T ss_pred ChHH-HHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHhhhccc
Confidence 76 99999999999999999999999999999999999876543
No 7
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=1.3e-45 Score=372.92 Aligned_cols=316 Identities=17% Similarity=0.174 Sum_probs=250.3
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
|++|+|+|++++|++...+. .+ .. .........+||+++|+|++|++||.
T Consensus 3 m~~i~viG~~~~D~~~~~~~---------~~-----------~~---~~~~~~~~~~GG~~~NvA~~la~LG~------- 52 (330)
T 3iq0_A 3 LSKVFTIGEILVEIMASKIG---------QP-----------FD---QPGIWNGPYPSGAPAIFIDQVTRLGV------- 52 (330)
T ss_dssp -CEEEEESCCEEEEEEEEET---------CC-----------SS---SCEEEEEEEEECHHHHHHHHHHHTTC-------
T ss_pred CCCEEEEcceeEEEeccCCC---------CC-----------cc---ccccccCcCCCCHHHHHHHHHHHCCC-------
Confidence 45899999999999986321 00 00 00112457899999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEec-C-CCCCCCCChhhhhhccCC
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQ-G-TSSTINYDPCLVNLISKT 278 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~-g-a~~~l~~~~~~~~~l~~a 278 (479)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|+.+++.++++|+|++..+. + +...++++++....++++
T Consensus 53 -~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 131 (330)
T 3iq0_A 53 -PCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDC 131 (330)
T ss_dssp -CEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTE
T ss_pred -cEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccC
Confidence 899999999999999999999999999998865 456999999999988999544443 3 445577777766778999
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh--hhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE 356 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~ 356 (479)
+++|++|+.+..+...+.+.++++.++++|.++++|++... +......+.++.+++++|++++|++|++.|+|..
T Consensus 132 ~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--- 208 (330)
T 3iq0_A 132 THFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHS--- 208 (330)
T ss_dssp EEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSCS---
T ss_pred CEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCCC---
Confidence 99999999763333467789999999999999999997432 1111123455667899999999999999998853
Q ss_pred cHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 011689 357 SPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIA 435 (479)
Q Consensus 357 ~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~A 435 (479)
+++. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|
T Consensus 209 ~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-~~~a~~~A~~~a 287 (330)
T 3iq0_A 209 TPERAIAGFLEEGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-AHRALQYANACG 287 (330)
T ss_dssp SHHHHHHHHHHHTCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHHHH
Confidence 4444 45567789999999999999999998889999999999999999999999999999999998 999999999999
Q ss_pred HHHhcccCCCCCCCCHHHHHHHHHccccccccCCCcc
Q 011689 436 ATVVGQQGTRLSVRHASELAESFAYRIKSSTVGSDIS 472 (479)
Q Consensus 436 a~~v~~~G~~~~~p~~~el~~~l~~~~~~~~~~~~~~ 472 (479)
+.+|++.|+..++|+.++++++++++....+..-+-+
T Consensus 288 a~~v~~~G~~~~~p~~~ev~~~~~~~~~~i~~~~~~~ 324 (330)
T 3iq0_A 288 ALAVTRRGPMEGTSRLMEIETFIQRHDMSIREAAQEG 324 (330)
T ss_dssp HHHTTSCSSSTTCCCHHHHHHHHHHC-----------
T ss_pred HHHHcCcCCCCCCCCHHHHHHHHHhcccchhHHHhcc
Confidence 9999999999899999999999988766544433333
No 8
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=3.5e-45 Score=367.61 Aligned_cols=306 Identities=22% Similarity=0.235 Sum_probs=251.1
Q ss_pred CCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCC
Q 011689 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (479)
Q Consensus 119 ~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~ 198 (479)
|+++++|+|+|++++|++...+. .|++ ....+...+||+++|+|++|++||.
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~-----~p~~-------------------~~~~~~~~~GG~~~NvA~~la~LG~---- 56 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSG-----VGLA-------------------DVQSFGKYLGGSAANVSVAAARHGH---- 56 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSS-----CCGG-------------------GCCCBCCEEECHHHHHHHHHHHTTC----
T ss_pred cccCCCEEEEChhheeeecccCC-----CCcc-------------------ccceeeecCCCcHHHHHHHHHHCCC----
Confidence 45667899999999999986543 1110 1236778999999999999999999
Q ss_pred CCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecC--C-CCCCCCChhhhhh
Q 011689 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQG--T-SSTINYDPCLVNL 274 (479)
Q Consensus 199 ~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~g--a-~~~l~~~~~~~~~ 274 (479)
++.++|.||+|.+|+++++.|++.||+++++.+ ++.+|+.+++.++.+|+++++.+.+ + ...++++++..+.
T Consensus 57 ----~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~ 132 (319)
T 3pl2_A 57 ----NSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDD 132 (319)
T ss_dssp ----CEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHH
T ss_pred ----ceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHH
Confidence 899999999999999999999999999998864 5569999999888788888887754 3 4466777776777
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh--hh-hhhhHHHHHHhcccCcEEEcCHHHHHHhhC
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWEIVGNYADIVFANSDEARAFCH 351 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~-~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g 351 (479)
+.+++++|++|+.+........+..+++.+++ +.++++|++... +. +....+.++.+++++|++++|++|++.|+|
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 211 (319)
T 3pl2_A 133 VREADILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVG 211 (319)
T ss_dssp HHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHS
T ss_pred hccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcC
Confidence 88999999999876544345666777777665 667899986211 00 111245566788999999999999999998
Q ss_pred CCCCCcHH-HHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 352 FSSKESPE-STTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 352 ~~~~~~~~-~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
.. +.+ .+.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++
T Consensus 212 ~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-~~~a~~~ 287 (319)
T 3pl2_A 212 ET---EPERAGRALLERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-LEKVLRF 287 (319)
T ss_dssp CC---SHHHHHHHHHHTTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHH
T ss_pred CC---CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-HHHHHHH
Confidence 53 344 455677789999999999999999988889999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 431 AARIAATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 431 A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
|+++|+++|++.|+...+|+.+|++++++++
T Consensus 288 A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 318 (319)
T 3pl2_A 288 ANTAGALVASRLECSTAMPTTDEVEASLNQK 318 (319)
T ss_dssp HHHHHHHHHTSSCSGGGCCCHHHHHHHCC--
T ss_pred HHHHHHHHHhccCCcCCCCCHHHHHHHHhcc
Confidence 9999999999999998899999999998764
No 9
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-44 Score=367.82 Aligned_cols=308 Identities=17% Similarity=0.178 Sum_probs=251.3
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
+++|+|+|++++|++.... + ++ .....+...+||+++|+|++|++||.
T Consensus 2 ~~~v~viG~~~~D~~~~~~-----------~-----------~~---~~~~~~~~~~GG~~~NvA~~la~LG~------- 49 (346)
T 3ktn_A 2 SLKIAAFGEVMLRFTPPEY-----------L-----------ML---EQTEQLRMNFVGTGVNLLANLAHFQL------- 49 (346)
T ss_dssp CCEEEEECCCEEEEECSTT-----------C-----------CT---TTCSCCEEEEECHHHHHHHHHHHTTC-------
T ss_pred CCcEEEeChhhhhhcCCCC-----------C-----------cc---cccceeEEeccCHHHHHHHHHHHcCC-------
Confidence 3579999999999986321 1 11 12347889999999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEe-c---CCCCCCCCChhh-hhhcc
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAY-Q---GTSSTINYDPCL-VNLIS 276 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~-~---ga~~~l~~~~~~-~~~l~ 276 (479)
++.++|.||+|.+|+.+++.|++.||+++++...+.+|+.+++.++.+++++++.+ . ++...++++++. ...++
T Consensus 50 -~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (346)
T 3ktn_A 50 -ETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLA 128 (346)
T ss_dssp -EEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHT
T ss_pred -CeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhC
Confidence 89999999999999999999999999999887777789999988776566677777 3 344566666655 45688
Q ss_pred CCcEEEEeccccC-CcchHHHHHHHHHHHHhcCCEEEEeCCChh--hhh---hhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVT--CIE---RHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~-~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~~---~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
++++||++|+.+. .+...+.+.++++.++++|+++++|++... +.. ....+.+..+++++|++++|++|++.|+
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~ 208 (346)
T 3ktn_A 129 EVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELL 208 (346)
T ss_dssp TCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTS
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHh
Confidence 9999999998653 232357889999999999999999996211 110 1123456678899999999999999999
Q ss_pred CCC-CC-----CcHHH-HHHHHhc-CCCEEEEeecCCC-------eEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHH
Q 011689 351 HFS-SK-----ESPES-TTRYLSH-FVPLVSVTDGARG-------SYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILY 415 (479)
Q Consensus 351 g~~-~~-----~~~~~-a~~~l~~-g~~~VVVT~G~~G-------a~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 415 (479)
|.. .. ++.+. +.+++.. +++.||||+|++| ++++++++.+++|+++++++|||||||+|+|||++
T Consensus 209 g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~ 288 (346)
T 3ktn_A 209 GFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILY 288 (346)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHH
T ss_pred CCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHH
Confidence 865 22 12334 3445554 8999999999999 88888888999999999999999999999999999
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHccccc
Q 011689 416 GILRGVSDLKGMGALAARIAATVVGQQGTRLSVRHASELAESFAYRIKS 464 (479)
Q Consensus 416 ~l~~g~~~l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~~~ 464 (479)
+|++|++ +++|+++|+++|+.+|++.|+.. +|+.++++++++++-..
T Consensus 289 ~l~~g~~-l~~a~~~A~a~aa~~v~~~G~~~-~p~~~ev~~~l~~~~~~ 335 (346)
T 3ktn_A 289 GYSQNWS-LEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVLEHPNID 335 (346)
T ss_dssp HHHTTCC-HHHHHHHHHHHHHHHTTSSSSCC-CCCHHHHHHHHHCTTCC
T ss_pred HHHcCCC-HHHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHhcCCce
Confidence 9999998 99999999999999999999987 89999999999865444
No 10
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=2.8e-45 Score=367.78 Aligned_cols=289 Identities=25% Similarity=0.306 Sum_probs=246.8
Q ss_pred CCCCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCC
Q 011689 116 ASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGK 195 (479)
Q Consensus 116 ~~~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~ 195 (479)
+..+++|++|+|+|++++|++..++. +| .+++. .....+...+||+++|+|++|++||.
T Consensus 13 ~~~~~mm~~i~viG~~~iD~~~~v~~-----~p------------~~g~~---~~~~~~~~~~GG~~~NvA~~la~LG~- 71 (310)
T 3go6_A 13 TNVGPMAPRVCVVGSVNMDLTFVVDA-----LP------------RPGET---VLAASLTRTPGGKGANQAVAAARAGA- 71 (310)
T ss_dssp ------CCEEEEECCCEEEEEEECSS-----CC------------CTTCC---CCCSEEEEEEECHHHHHHHHHHHTTC-
T ss_pred hccccccCCEEEECCceEEEEEecCC-----CC------------CCCCe---EEecceeecCCCHHHHHHHHHHHCCC-
Confidence 34445667899999999999998764 22 11111 12346789999999999999999999
Q ss_pred CCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhc
Q 011689 196 PIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLI 275 (479)
Q Consensus 196 ~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l 275 (479)
++.++|.||+|.+|+.+++.|++.||+++++...+.+|+.++++++++|+|+++.+++++..++ ++ .+.+
T Consensus 72 -------~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-~~~l 141 (310)
T 3go6_A 72 -------QVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-PSAV 141 (310)
T ss_dssp -------EEEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-TTTT
T ss_pred -------CeEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-HHHh
Confidence 8999999999999999999999999999988777779999999999899999999988776665 33 5667
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK 355 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~ 355 (479)
++++++|+++. .+ .+.+.++++.+++.|.++++|++.... ..+.++.+++++|++++|++|++.|++.
T Consensus 142 ~~~~~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~~~~~ll~~~dil~~N~~Ea~~l~g~--- 209 (310)
T 3go6_A 142 ANCDVLLTQLE---IP--VATALAAARAAQSADAVVMVNASPAGQ----DRSSLQDLAAIADVVIANEHEANDWPSP--- 209 (310)
T ss_dssp TTCSEEEECSS---SC--HHHHHHHHHHHHHTTCEEEEECCSSSC----CHHHHHHHHHHCSEEEEEHHHHHHSSSC---
T ss_pred hcCCEEEECCC---CC--HHHHHHHHHHHHHcCCEEEEcCCcccc----chHHHHHHHhhCCEEEeCHHHHHHHhCC---
Confidence 89999999853 23 678889999999999999999975321 2344556789999999999999999873
Q ss_pred CcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc----CCChHHHHHHHH
Q 011689 356 ESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR----GVSDLKGMGALA 431 (479)
Q Consensus 356 ~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~----g~~~l~eAl~~A 431 (479)
++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++ |++ +++|+++|
T Consensus 210 -------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-l~~a~~~A 275 (310)
T 3go6_A 210 -------------PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-RLRALRRA 275 (310)
T ss_dssp -------------CSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-HHHHHHHH
T ss_pred -------------CCEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-HHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999 997 99999999
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 432 ARIAATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 432 ~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
+++|+.+|++.|+...+|+.+|+++++++.
T Consensus 276 ~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 305 (310)
T 3go6_A 276 CAAGALATLVSGVGDCAPAAAAIDAALRAN 305 (310)
T ss_dssp HHHHHHHTTSSCSTTCCCCHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCCCCCCCHHHHHHHHHhc
Confidence 999999999999999999999999999754
No 11
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=2e-44 Score=366.14 Aligned_cols=309 Identities=20% Similarity=0.301 Sum_probs=258.7
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccc---cchhhhhhhhccCCCceeecCchHHHHHHHHHHhC----
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVN---HEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLG---- 193 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~---~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG---- 193 (479)
++++|+|+|++++|+++.++.++++++++++|...+++ .|.++++. ....+...+||+++|+|++|++||
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~---~~~~~~~~~GG~~~NvA~~la~lgg~~~ 81 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELV---KKFKVEYHAGGSTQNSIKVAQWMIQQPH 81 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHH---HHSCCEEEEECHHHHHHHHHHHHHCSST
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHh---ccCCceecCCcHHHHHHHHHHHhcCCCC
Confidence 45679999999999999999889999999999876654 23333333 234788999999999999999996
Q ss_pred CCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCC-hhh-
Q 011689 194 GKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD-PCL- 271 (479)
Q Consensus 194 ~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~-~~~- 271 (479)
. ++.|+|.||+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..++++ ++.
T Consensus 82 ~--------~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~ 152 (345)
T 1bx4_A 82 K--------AATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDL 152 (345)
T ss_dssp T--------CEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTS
T ss_pred C--------cEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc-CCceEeeeccchHhhcCcccccCc
Confidence 7 8999999999999999999999999999998766679999999887 7889888888877667665 443
Q ss_pred ---hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHH
Q 011689 272 ---VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARA 348 (479)
Q Consensus 272 ---~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~ 348 (479)
.+.+++++++|++|+.+..+ .+.+.++++.+++.+.++++|+.+..+.+ ...+.++.+++++|++++|++|++.
T Consensus 153 ~~~~~~~~~~~~v~~~g~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~ 229 (345)
T 1bx4_A 153 EKNWMLVEKARVCYIAGFFLTVS--PESVLKVAHHASENNRIFTLNLSAPFISQ-FYKESLMKVMPYVDILFGNETEAAT 229 (345)
T ss_dssp HHHHHHHHHCSEEEEEGGGGGTC--HHHHHHHHHHHHHTTCEEEEECCSHHHHH-HTHHHHHHHGGGCSEEEEEHHHHHH
T ss_pred HHHHHHHhhCCEEEEEEEeccCC--HHHHHHHHHHHHHcCCEEEEeCCcHHHHH-HHHHHHHHHhccCCEEeCCHHHHHH
Confidence 34567899999999877655 57888999999999999999997643322 2234456688999999999999999
Q ss_pred hhCCC--CCCcHHHHH-HHHh------cCCCEEEEeecCCCeEEEECCeEEEeCCCCC---CCCCccchhHHHHHHHHHH
Q 011689 349 FCHFS--SKESPESTT-RYLS------HFVPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYASGILYG 416 (479)
Q Consensus 349 L~g~~--~~~~~~~a~-~~l~------~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~ 416 (479)
|++.. ..++.+.+. ++++ .+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++
T Consensus 230 l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~ 309 (345)
T 1bx4_A 230 FAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQ 309 (345)
T ss_dssp HHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHH
T ss_pred HhcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHH
Confidence 98743 234455544 4555 4899999999999999998888889999887 8999999999999999999
Q ss_pred HHcCCChHHHHHHHHHHHHHHHhcccCCC
Q 011689 417 ILRGVSDLKGMGALAARIAATVVGQQGTR 445 (479)
Q Consensus 417 l~~g~~~l~eAl~~A~a~Aa~~v~~~G~~ 445 (479)
|++|++ +++|+++|+++|+.++++.|+.
T Consensus 310 l~~g~~-~~~a~~~A~~~aa~~v~~~G~~ 337 (345)
T 1bx4_A 310 LVSDKP-LTECIRAGHYAASIIIRRTGCT 337 (345)
T ss_dssp HTTTCC-HHHHHHHHHHHHHHHTTSSSSC
T ss_pred HHcCCC-HHHHHHHHHHHHHHHHhccCCC
Confidence 999998 9999999999999999999987
No 12
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.4e-44 Score=366.44 Aligned_cols=302 Identities=20% Similarity=0.260 Sum_probs=237.9
Q ss_pred CCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCC
Q 011689 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (479)
Q Consensus 119 ~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~ 198 (479)
|+++++|+|+|++++|++...+. ++ .....+...+||+++|+|++|++||.
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~g----------------------~~---~~~~~~~~~~GG~~~NvA~~la~LG~---- 73 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRPG----------------------PL---EHAEAFHKRTAGAETNVAIGLARLGL---- 73 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSSS----------------------CG---GGCCEEEEEEECHHHHHHHHHHHTTC----
T ss_pred cCCCCCEEEEChhhhhccCCCCC----------------------cc---chhhheeecCCCHHHHHHHHHHhCCC----
Confidence 35667899999999999986432 11 12346789999999999999999999
Q ss_pred CCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEE-Ee--cCCCCCCCCChhhhhh
Q 011689 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAML-AY--QGTSSTINYDPCLVNL 274 (479)
Q Consensus 199 ~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~-~~--~ga~~~l~~~~~~~~~ 274 (479)
++.++|.||+|.+|+++++.|++.||+++++.+. +.+|+.+++.++++|+++++ .+ .++...++++++....
T Consensus 74 ----~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~ 149 (336)
T 4du5_A 74 ----KVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAW 149 (336)
T ss_dssp ----CEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHH
T ss_pred ----cEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhH
Confidence 8999999999999999999999999999988765 45899999988888855433 33 3566677777777777
Q ss_pred ccCCcEEEEeccccCCc-chHHHHHHHHHHHHhcCCEEEEeCCChh--hh-hhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 275 ISKTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~-~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~-~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
+++++++|++|+.+..+ ...+.+.++++.+++.+.++++||+... +. .....+.++.+++++|++++|++|++.|+
T Consensus 150 l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~ 229 (336)
T 4du5_A 150 LLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLT 229 (336)
T ss_dssp HTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHH
T ss_pred hccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHh
Confidence 88999999999865433 3467888999999999999999997211 10 11223455677899999999999999999
Q ss_pred CCCCCCcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCC-CCCccchhHHHHHHHHHHHHcCCChHHHHH
Q 011689 351 HFSSKESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCV-PVDTCGAGDAYASGILYGILRGVSDLKGMG 428 (479)
Q Consensus 351 g~~~~~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~l~eAl 428 (479)
|.. +.+. +.++++.+++.||||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+
T Consensus 230 g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-l~~a~ 305 (336)
T 4du5_A 230 GET---TPEGVARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-VPEAV 305 (336)
T ss_dssp CCC---SHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-HHHHH
T ss_pred CCC---CHHHHHHHHHhcCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-HHHHH
Confidence 853 4444 45566789999999999999999999999999999997 999999999999999999999998 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 011689 429 ALAARIAATVVGQQGTRLSVRHASELAES 457 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~~~p~~~el~~~ 457 (479)
++|+++|+.+|++.|+..++|+++|++++
T Consensus 306 ~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 334 (336)
T 4du5_A 306 KRGAWIGARAVQVLGDSEGLPTRAELNAA 334 (336)
T ss_dssp HHHHHHHHHHHC------CCCCHHHHHCC
T ss_pred HHHHHHHHHHhccCCCccCCCCHHHHHhc
Confidence 99999999999999999999999999764
No 13
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.4e-44 Score=364.90 Aligned_cols=295 Identities=16% Similarity=0.168 Sum_probs=250.6
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
++++|+|+|++++|+++.++. +|.+ + +. .....+...+||+++|+|++|++||.
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~-----~p~~-~-----------~~---~~~~~~~~~~GG~~~NvA~~la~LG~------ 81 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVAD-----MPKG-E-----------GK---VLPYEVLQIAEGMASSAAYAVHRMGG------ 81 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSS-----CCCS-S-----------SC---CCCSEEEEEEECHHHHHHHHHHHTTC------
T ss_pred cCCeEEEECcceEEEEeecCC-----CCCC-C-----------Ce---EeeeeeEEcCCcHHHHHHHHHHHcCC------
Confidence 345799999999999998764 2211 1 11 12236778999999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCc
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad 279 (479)
++.++|.||+|.+|+++++.|++.||++.++.+ .+.+|+.++++++++|+|+++.+++++..++++++....+.+++
T Consensus 82 --~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~ 159 (343)
T 2rbc_A 82 --RASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFD 159 (343)
T ss_dssp --EEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCHHHHTTCS
T ss_pred --ceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcHhhhCCCC
Confidence 899999999999999999999999999998875 45689999999998899999888887666666666556678999
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHH-hcccCcEEEcCHHHHHHhhCCCCCCcH
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEI-VGNYADIVFANSDEARAFCHFSSKESP 358 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~-ll~~~Dvl~~N~~Ea~~L~g~~~~~~~ 358 (479)
+||++++. .+.+.++++.+++.+.++++|+... .+.+.. +++++|++++|++|++.|++.. ++
T Consensus 160 ~v~~~~~~------~~~~~~~~~~a~~~g~~v~~Dp~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~---~~ 223 (343)
T 2rbc_A 160 AVLVDVRW------PELALDVLTVARALGKPAILDGDVA-------PVETLEGLAPAATHIVFSEPAATRLTGLE---TV 223 (343)
T ss_dssp EEEECSSS------HHHHHHHHHHHHHTTCCEEEEECSC-------CHHHHHHHGGGCSEEEEEHHHHHHHHCCS---SH
T ss_pred EEEEcCCC------HHHHHHHHHHHHHCCCEEEEECCcc-------ccccHHHHHhcCCEEEeCHHHHHHHcCCC---CH
Confidence 99998753 2567888899999999999999642 123344 7799999999999999999853 44
Q ss_pred HH-HHHHHhcCC-CEEEEeecCCCeEEEECC--eEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 359 ES-TTRYLSHFV-PLVSVTDGARGSYIGVKG--EAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 359 ~~-a~~~l~~g~-~~VVVT~G~~Ga~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
+. +.++++.++ +.||||+|++|+++++++ +.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 224 ~~~~~~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-~~~a~~~A~~~ 302 (343)
T 2rbc_A 224 KDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-SRAAVRLSSVA 302 (343)
T ss_dssp HHHHHHHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 44 455667788 999999999999998877 78899999999999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+.+|++.|+...+|+.+++++++++
T Consensus 303 aa~~v~~~G~~~~~p~~~ev~~~l~~ 328 (343)
T 2rbc_A 303 AALKCTVFGGRIGAPTREETEEAMRQ 328 (343)
T ss_dssp HHHHHTSSSGGGGCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCccCCCCHHHHHHHHHh
Confidence 99999999998888999999999875
No 14
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=1.2e-44 Score=362.19 Aligned_cols=300 Identities=21% Similarity=0.314 Sum_probs=250.4
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+++++|+|+|++++|++..++. +|. +++. .....+...+||+++|+|++|++||.
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~-----~p~------------~g~~---~~~~~~~~~~GG~~~N~A~~la~lG~----- 56 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQS-----FPT------------PGET---VTGNHYQVAFGGKGANQAVAAGRSGA----- 56 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSS-----CCC------------TTCC---CCCCCEEEEEECHHHHHHHHHHHHTC-----
T ss_pred CCCCeEEEECcceEeEEEecCC-----CCC------------CCCe---eecCceeecCCCHHHHHHHHHHhCCC-----
Confidence 4556899999999999998764 221 1111 12346788999999999999999999
Q ss_pred CCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh--hhcc
Q 011689 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--NLIS 276 (479)
Q Consensus 200 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~--~~l~ 276 (479)
++.++|.||+|.+|+.+++.|++.||++.++.+ .+.+|+.++++++++|+|+++.+++++..++++++.. +.+.
T Consensus 57 ---~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~ 133 (309)
T 1rkd_A 57 ---NIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIA 133 (309)
T ss_dssp ---EEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHH
T ss_pred ---ceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcc
Confidence 899999999999999999999999999998875 4568999999999889999988888876776665432 4567
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE 356 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~ 356 (479)
+++++|+++. .+ .+.+.++++.+++.+.++++|++... .+. +.+++++|++++|++|++.|+|....+
T Consensus 134 ~~~~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~----~~ll~~~dil~~N~~E~~~l~g~~~~~ 201 (309)
T 1rkd_A 134 NASALLMQLE---SP--LESVMAAAKIAHQNKTIVALNPAPAR---ELP----DELLALVDIITPNETEAEKLTGIRVEN 201 (309)
T ss_dssp HCSEEEECSS---SC--HHHHHHHHHHHHHTTCEEEECCCSCC---CCC----HHHHTTCSEECCCHHHHHHHHSCCCSS
T ss_pred cCCEEEEeCC---CC--HHHHHHHHHHHHHcCCEEEEECCccc---cch----HHHHhhCCEEEcCHHHHHHHhCCCCCC
Confidence 8999999743 33 57788889999999999999997531 111 245689999999999999999864321
Q ss_pred --cHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 011689 357 --SPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAAR 433 (479)
Q Consensus 357 --~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a 433 (479)
+.+. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|++
T Consensus 202 ~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-~~~a~~~a~~ 280 (309)
T 1rkd_A 202 DEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-LPEAIRFAHA 280 (309)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-HHHHHHHHHH
Confidence 2333 45566789999999999999999998888999999999999999999999999999999998 9999999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 434 IAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 434 ~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+|+.++++.|+...+|+.+++++++++
T Consensus 281 ~aa~~~~~~G~~~~~p~~~ev~~~~~~ 307 (309)
T 1rkd_A 281 AAAIAVTRKGAQPSVPWREEIDAFLDR 307 (309)
T ss_dssp HHHHHHTSSSSGGGCCCHHHHHHHHHT
T ss_pred HHHHHcCCCCccCCCCCHHHHHHHHhc
Confidence 999999999999889999999998864
No 15
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=8.1e-44 Score=359.61 Aligned_cols=309 Identities=19% Similarity=0.306 Sum_probs=248.2
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+++++|+|+|++++|++..... .| .. ....+...+||+++|+|++|++||.
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~~-----~~--------------~~-----~~~~~~~~~GG~~~NvA~~la~LG~----- 59 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEYN-----RP--------------ME-----ETMTFSKYVGGSPANIVIGSSKLGL----- 59 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSCS-----SC--------------GG-----GCCCEEEEEESHHHHHHHHHHHTTC-----
T ss_pred ccCCcEEEECcceEEEecCCCC-----CC--------------cc-----ccceeEecCCCHHHHHHHHHHHcCC-----
Confidence 4557899999999999987432 00 00 1236788999999999999999999
Q ss_pred CCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC--CCceEEEEEECCCCCeEEEEecC--CCCCCCCChhhhhhc
Q 011689 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD--GTTGTVIVLTTPDAQRAMLAYQG--TSSTINYDPCLVNLI 275 (479)
Q Consensus 200 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~--~~T~~~~v~~~~~G~rt~~~~~g--a~~~l~~~~~~~~~l 275 (479)
++.++|.||+|.+|+++++.|++.||+++++.+.+ .+|+.+++.++.+|++.++.++. ++..++++++....+
T Consensus 60 ---~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~ 136 (332)
T 2qcv_A 60 ---KAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYI 136 (332)
T ss_dssp ---CEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHH
T ss_pred ---ceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHH
Confidence 89999999999999999999999999999886543 48999988877678887776664 344566666655567
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhh---hhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCI---ERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~---~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
++++++|++|+.+......+.+.++++.+++++.++++|++..... +....+.++.+++++|++++|++|++.|++.
T Consensus 137 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 216 (332)
T 2qcv_A 137 RRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENR 216 (332)
T ss_dssp TTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTC
T ss_pred ccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCC
Confidence 8999999999875433335778899999999999999999742110 1112344566789999999999999999986
Q ss_pred CCCCcH-HHHHHHHhcCCCEEEEeecCCCeEEEEC-CeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 353 SSKESP-ESTTRYLSHFVPLVSVTDGARGSYIGVK-GEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 353 ~~~~~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
...++. +.+.++++.+++.||||+|++|++++++ ++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++
T Consensus 217 ~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-~~~a~~~ 295 (332)
T 2qcv_A 217 TEKGDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-IETALKY 295 (332)
T ss_dssp SSCCCHHHHHHHHTTSSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHH
T ss_pred CcCCCHHHHHHHHHHcCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-HHHHHHH
Confidence 422233 4455666779999999999999999887 678899999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 431 AARIAATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 431 A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
|+++|+.++++.|+...+|+.+++++++++.
T Consensus 296 A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 326 (332)
T 2qcv_A 296 GSASASIVVSKHSSSDAMPSVEEIEALIEKD 326 (332)
T ss_dssp HHHHHHHHHHC-----CCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHccCCCccCCCCHHHHHHHHhcC
Confidence 9999999999999998899999999998754
No 16
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=3.2e-45 Score=365.23 Aligned_cols=295 Identities=20% Similarity=0.289 Sum_probs=249.8
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
|++|+|+|++++|+++.++. +|. +++.. .....+...+||++.|+|++|++||.
T Consensus 2 m~~v~viG~~~~D~~~~~~~-----~p~------------~g~~~--~~~~~~~~~~GG~~~NvA~~la~lG~------- 55 (304)
T 3ry7_A 2 TNKVVILGSTNVDQFLTVER-----YAQ------------PGETL--HVEEAQKAFGGGKGANQAIATARMQA------- 55 (304)
T ss_dssp CCEEEEECCCEEEEEEECSS-----CCC------------TTCCC--CCSSCCEEEEECHHHHHHHHHHHTTC-------
T ss_pred CCcEEEEccceeEEEEeccC-----CCC------------CCCce--ecccceeecCCCHHHHHHHHHHHCCC-------
Confidence 35799999999999998764 221 11111 02346789999999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh--hhhccCC
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--VNLISKT 278 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~--~~~l~~a 278 (479)
++.++|.||+|.+|+.+++.|++.||+++++.+ ++.+|+.++++++++|+|+++.+++++..++++++. .+.++++
T Consensus 56 -~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~ 134 (304)
T 3ry7_A 56 -DTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINA 134 (304)
T ss_dssp -EEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTC
T ss_pred -CeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccC
Confidence 899999999999999999999999999998865 556999999999988999999998887777766543 2457899
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC--
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE-- 356 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~-- 356 (479)
+++++++. .+ .+.+.++++.+++.+.++++|++... +..+.+++++|++++|++|++.|++....+
T Consensus 135 ~~v~~~~~---~~--~~~~~~~~~~a~~~~~~v~~D~~~~~-------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~ 202 (304)
T 3ry7_A 135 DFVVAQLE---VP--IPAIISAFEIAKAHGVTTVLNPAPAK-------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQ 202 (304)
T ss_dssp SEEEEETT---SC--HHHHHHHHHHHHHTTCEEEEECCSCC-------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHH
T ss_pred CEEEEcCC---CC--HHHHHHHHHHHHHcCCEEEEeCCccc-------cccHHHHHhCCEEecCHHHHHHHhCCCCCChh
Confidence 99999843 23 67888999999999999999997531 122346689999999999999999975332
Q ss_pred cHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcC-CChHHHHHHHHHHH
Q 011689 357 SPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRG-VSDLKGMGALAARI 434 (479)
Q Consensus 357 ~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g-~~~l~eAl~~A~a~ 434 (479)
+.+. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++| ++ +++|+++|+++
T Consensus 203 ~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-~~~a~~~A~~~ 281 (304)
T 3ry7_A 203 SMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-LADAIDFGNKA 281 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-HHHHHHHHHHH
Confidence 2333 455667899999999999999999988999999999999999999999999999999999 98 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHH
Q 011689 435 AATVVGQQGTRLSVRHASELAE 456 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~ 456 (479)
|+.+|++.|+.+++|+++|+++
T Consensus 282 aa~~~~~~G~~~~~p~~~ev~~ 303 (304)
T 3ry7_A 282 SSLTVQKHGAQASIPLLEEVNQ 303 (304)
T ss_dssp HHTTSCCCCTGGGCCCHHHHHT
T ss_pred HHHHhCCCCccccCCCHHHHhh
Confidence 9999999999999999999975
No 17
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=3.6e-44 Score=361.65 Aligned_cols=312 Identities=20% Similarity=0.241 Sum_probs=244.8
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+++++|+|||++++|++.......+ .. .+......+...+||+++|+|++|++||.
T Consensus 3 m~~~~v~~iG~~~~D~~~~~~~~~~------------~~-------~~~~p~~~~~~~~GG~~~NvA~~la~LG~----- 58 (325)
T 3h49_A 3 LDNLDVICIGAAIVDIPLQPVSKNI------------FD-------VDSYPLERIAMTTGGDAINEATIISRLGH----- 58 (325)
T ss_dssp --CEEEEEESCCEEEEEECSCCGGG------------GG-------SSCCCCSCCCCEEESHHHHHHHHHHHTTC-----
T ss_pred CCCCeEEEEChhhheeeccCCCCcc------------cc-------ccccchheeEEccCcHHHHHHHHHHHCCC-----
Confidence 3567899999999999865322100 00 00011125678999999999999999999
Q ss_pred CCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCC-CCCCCChhhhhhccC
Q 011689 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTS-STINYDPCLVNLISK 277 (479)
Q Consensus 200 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~-~~l~~~~~~~~~l~~ 277 (479)
++.++|.||+|.+|+++++.|++.||+++++.+ .+.+|+.++++++++|+|+++.+++.. ..++.+++....+.+
T Consensus 59 ---~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (325)
T 3h49_A 59 ---RTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQ 135 (325)
T ss_dssp ---EEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCGGGGGG
T ss_pred ---CeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcChhhhcc
Confidence 899999999999999999999999999998865 456899999999989999988776543 346666666667889
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCC-ChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTAS-DVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE 356 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~-~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~ 356 (479)
++++|++++........+.+.++++.+++++. +++|+. ..... . ..+.+..+++++|++++|++|++.|+|..
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~-~~~d~~~~~~~~-~-~~~~~~~~l~~~dil~~N~~E~~~l~g~~--- 209 (325)
T 3h49_A 136 AKLLSLASIFNSPLLDGKALTEIFTQAKARQM-IICADMIKPRLN-E-TLDDICEALSYVDYLFPNFAEAKLLTGKE--- 209 (325)
T ss_dssp CSEEEEEEETTSTTSCHHHHHHHHHHHHHTTC-EEEEEECCCSSC-C-CHHHHHHHHTTCSEEECBHHHHHHHHTCS---
T ss_pred CCEEEEecccCCcccCHHHHHHHHHHHHhcCC-EEEecCCchhhh-h-HHHHHHHHHhhCCEEecCHHHHHHHhCCC---
Confidence 99999999754322235778899999999885 555532 21111 1 12334567799999999999999999853
Q ss_pred cHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCC-CCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 357 SPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPC-VPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 357 ~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
+.+. +.++++.+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 210 ~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-~~~a~~~A~~~ 288 (325)
T 3h49_A 210 TLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-LRECARFANAT 288 (325)
T ss_dssp SHHHHHHHHHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 3444 4456677999999999999999999999999999986 8999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHcccccc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAYRIKSS 465 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~~~~~~ 465 (479)
|+++|++.|+..++|+++++++++++...+.
T Consensus 289 aa~~v~~~G~~~~~p~~~ev~~~l~~~~~~~ 319 (325)
T 3h49_A 289 AAISVLSVGATTGVKNRKLVEQLLEEYEGEG 319 (325)
T ss_dssp HHHHHTSSSSSSSCSSSHHHHTC--------
T ss_pred HHHHHcccCCCCCCCCHHHHHHHHHhccCCc
Confidence 9999999999999999999999988766553
No 18
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=3.2e-45 Score=365.28 Aligned_cols=286 Identities=22% Similarity=0.325 Sum_probs=244.6
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
++|+|+|++++|+++.++. +|. +++. .....+...+||+++|+|++|++||.
T Consensus 3 ~~i~viG~~~iD~~~~~~~-----~p~------------~g~~---~~~~~~~~~~GG~~~NvA~~la~lG~-------- 54 (299)
T 3ikh_A 3 LRVYVTGNITVDETWSIPD-----IPK------------KGAS---IHGVKVSQDIGGKGANQAIILSRCGI-------- 54 (299)
T ss_dssp CCEEEECCCEEEEEEECSS-----CCC------------TTCE---EECEEEEEEEECHHHHHHHHHHHTTC--------
T ss_pred ceEEEECceEEEEEEecCC-----CCC------------CCCe---EEeeeeeeccCCHHHHHHHHHHHCCC--------
Confidence 5799999999999998764 221 1111 12236788999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh--hhhccCCcE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--VNLISKTNI 280 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~--~~~l~~ad~ 280 (479)
++.++|.||+|.+|+.+++.|++.||++++++..+.+|+.++++++++|+|+++.+++++..++++++. .+.++++++
T Consensus 55 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 134 (299)
T 3ikh_A 55 ETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGDI 134 (299)
T ss_dssp CEEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTTCE
T ss_pred CeEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccCCE
Confidence 899999999999999999999999999998876667999999999989999999888876667666543 345789999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHH
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPES 360 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~ 360 (479)
+++++.. + .+.+.++++.+++.+.++++|++... +.+..+++++|++++|++|++.|++
T Consensus 135 v~~~g~~---~--~~~~~~~~~~a~~~g~~v~~D~~~~~-------~~~~~ll~~~dil~~N~~E~~~l~g--------- 193 (299)
T 3ikh_A 135 LLQQGNF---S--LDKTRALFQYARSRGMTTVFNPSPVN-------PDFCHLWPLIDIAVVNESEAELLQP--------- 193 (299)
T ss_dssp EEECSCS---C--HHHHHHHHHHHHHTTCEEEECCCSCC-------GGGGGCGGGCSEEEEEHHHHHHHCC---------
T ss_pred EEECCCC---C--HHHHHHHHHHHHHcCCEEEEccccch-------hhHHHHHhhCCEEEecHHHHHHHhc---------
Confidence 9998643 3 57788999999999999999997531 1234567899999999999999976
Q ss_pred HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHH-HHHHHHHcCCChHHH-HHHHHHHHHHHH
Q 011689 361 TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAS-GILYGILRGVSDLKG-MGALAARIAATV 438 (479)
Q Consensus 361 a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~A-gfl~~l~~g~~~l~e-Al~~A~a~Aa~~ 438 (479)
.+++.||||+|++|++++++++.+++|+++++++|||||||+|+| ||+++|++|++ +++ |+++|+++|+.+
T Consensus 194 ------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-~~~~a~~~a~~~aa~~ 266 (299)
T 3ikh_A 194 ------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-PDALALAHASRAAAIT 266 (299)
T ss_dssp ------CSCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-SCHHHHHHHHHHHHHH
T ss_pred ------CCCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHH
Confidence 578999999999999999888899999999999999999999999 99999999998 999 999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHHccccc
Q 011689 439 VGQQGTRLSVRHASELAESFAYRIKS 464 (479)
Q Consensus 439 v~~~G~~~~~p~~~el~~~l~~~~~~ 464 (479)
|++.|+..++|+.+++++++++.-..
T Consensus 267 v~~~G~~~~~p~~~ev~~~l~~~~~~ 292 (299)
T 3ikh_A 267 VSRRGTLSAFPGSRELAALLTTDGAE 292 (299)
T ss_dssp HHSSSSTTTSCCHHHHHHHHC-----
T ss_pred hCCCcccccCCCHHHHHHHHHhcccc
Confidence 99999999999999999999765443
No 19
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=1e-43 Score=366.41 Aligned_cols=314 Identities=22% Similarity=0.295 Sum_probs=255.6
Q ss_pred CCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHh---CCC
Q 011689 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL---GGK 195 (479)
Q Consensus 119 ~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~L---G~~ 195 (479)
++++++|+|+|++++|+++.++..+++++++++|...+++.+......+. ....+...+||+++|+|++|++| |.
T Consensus 29 ~~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~-~~~~~~~~~GG~~~NvA~~la~Lg~~g~- 106 (383)
T 2abs_A 29 ATGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPG- 106 (383)
T ss_dssp -CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG-GGGCCEEEEESHHHHHHHHHHHHHCSTT-
T ss_pred CCCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh-ccccceeeCCChHHHHHHHHHHhccCCC-
Confidence 35567899999999999999987788888888887665432111111111 23467889999999999999999 67
Q ss_pred CCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhc
Q 011689 196 PIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLI 275 (479)
Q Consensus 196 ~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l 275 (479)
++.|+|.||+|.+|+.+++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..+++++...+.+
T Consensus 107 -------~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~~~~~~~l 178 (383)
T 2abs_A 107 -------SAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWTTFA 178 (383)
T ss_dssp -------SEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHHHHT
T ss_pred -------cEEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc-CCceeEeeccChhhhCChhhhhHHHh
Confidence 8999999999999999999999999999988766679999999987 78999888888877777765556678
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHh-cCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHR-SGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~-~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
.++++||++|+.+..+ .+.+.++++.+++ .++++++|+....+.+ ...+.++.+++++|++++|++|++.|++...
T Consensus 179 ~~~~~v~~~g~~~~~~--~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~-~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~ 255 (383)
T 2abs_A 179 SGALIFYATAYTLTAT--PKNALEVAGYAHGIPNAIFTLNLSAPFCVE-LYKDAMQSLLLHTNILFGNEEEFAHLAKVHN 255 (383)
T ss_dssp TTCCEEEEEGGGGTTC--HHHHHHHHHHHHTSTTCEEEEECCCHHHHH-HCHHHHHHHHHTCSEEEEEHHHHHHHHHHHT
T ss_pred hcCCEEEEeeecccCC--HHHHHHHHHHHHHhcCCEEEEeCCcHHHHH-HHHHHHHHHHhhCCEEeCCHHHHHHHhcccC
Confidence 8999999999877655 5788899999998 8999999997644322 2234456678999999999999999987431
Q ss_pred --------------CCcHHHH-HHHHh------c-CCCEEEEeecCCCeEEE-----ECCeEEEeCCCCC---CCCCccc
Q 011689 355 --------------KESPEST-TRYLS------H-FVPLVSVTDGARGSYIG-----VKGEAVYIPPSPC---VPVDTCG 404 (479)
Q Consensus 355 --------------~~~~~~a-~~~l~------~-g~~~VVVT~G~~Ga~~~-----~~~~~~~vpa~~v---~vvDttG 404 (479)
.++.+++ .++++ . +++.||||+|++|++++ .+++.+++|++++ +++||||
T Consensus 256 ~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttG 335 (383)
T 2abs_A 256 LVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNG 335 (383)
T ss_dssp CC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTT
T ss_pred cccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCC
Confidence 1223343 34444 3 89999999999999998 5566788998877 8999999
Q ss_pred hhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcccCCCC
Q 011689 405 AGDAYASGILYGILRGVSDLKGMGALAARIAATVVGQQGTRL 446 (479)
Q Consensus 405 AGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~~G~~~ 446 (479)
|||+|+|||+++|++|++ +++|+++|+++|+.+|++.|+..
T Consensus 336 AGDaF~ag~~~~l~~g~~-l~~al~~A~a~aa~~v~~~Ga~~ 376 (383)
T 2abs_A 336 AGDAFVGGFLYALSQGKT-VKQCIMCGNACAQDVIQHVGFSL 376 (383)
T ss_dssp HHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHTSSSCCC
T ss_pred hHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHhcCCccC
Confidence 999999999999999998 99999999999999999999873
No 20
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=9.3e-44 Score=355.84 Aligned_cols=297 Identities=24% Similarity=0.299 Sum_probs=244.2
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
|+|+|+|++++|++...+. +. .....+...+||+++|+|++|++||.
T Consensus 2 ~~i~viG~~~~D~~~~~~~----------------------~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 48 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG----------------------HL---RGKRLLEVYVGGAEVNVAVALARLGV-------- 48 (309)
T ss_dssp CSEEEESCCEEEEECSSSS----------------------CG---GGCCEEEEEEECHHHHHHHHHHHHTC--------
T ss_pred CcEEEEccceEEEecCCCC----------------------cc---cchheeeeecCcHHHHHHHHHHHcCC--------
Confidence 4799999999999864221 00 11236778999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEec--CCCCCCCCChhhhhhccCCcE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~--ga~~~l~~~~~~~~~l~~ad~ 280 (479)
++.++|.||+|.+|+.+++.|++.||++.++.+.+.+|+.+++.++.+|+|+++.+. ++...++++++....++++++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 128 (309)
T 1v1a_A 49 KVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRF 128 (309)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCE
Confidence 899999999999999999999999999998875433999999988888998877665 445567766666667889999
Q ss_pred EEEeccccCC-cchHHHHHHHHHHHHhcCCEEEEeCCChh--hhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCc
Q 011689 281 FIVEGYLFEL-PDTIRTITKACEVAHRSGALVAVTASDVT--CIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKES 357 (479)
Q Consensus 281 v~i~g~~~~~-~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~ 357 (479)
+|++++.+.+ +...+.+.++++.+++.+.++++|++... +......+.++.+++++|++++|++|++.|++..
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~---- 204 (309)
T 1v1a_A 129 LHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV---- 204 (309)
T ss_dssp EEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----
T ss_pred EEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----
Confidence 9999987642 22357788899999999999999997421 1111123455668899999999999999999843
Q ss_pred HHHHHHHHhcCCCEEEEeecCCCeEEEEC-CeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011689 358 PESTTRYLSHFVPLVSVTDGARGSYIGVK-GEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAA 436 (479)
Q Consensus 358 ~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa 436 (479)
+.+.+ +.+++.||||+|++|+++ .+ ++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 205 -~~~~~--~~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-~~~a~~~a~~~aa 279 (309)
T 1v1a_A 205 -EEALR--ALSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-VEERLRLANLLGA 279 (309)
T ss_dssp -HHHHH--HTCCSEEEEECGGGCEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHH
T ss_pred -HHHHH--hcCCCEEEEEecCCCeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHH
Confidence 33434 678999999999999988 65 778899999999999999999999999999999998 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 437 TVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 437 ~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
.++++.|+...+|+.++++++++++
T Consensus 280 ~~v~~~G~~~~~~~~~~v~~~~~~~ 304 (309)
T 1v1a_A 280 SVAASRGDHEGAPYREDLEVLLKAT 304 (309)
T ss_dssp HHHTSSTTTTTCCCHHHHTTCC---
T ss_pred HHHcCCCCCcCCCCHHHHHHHHhhc
Confidence 9999999998889999998877654
No 21
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=1.3e-45 Score=372.39 Aligned_cols=303 Identities=25% Similarity=0.330 Sum_probs=229.4
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
++++|+|+|++++|++...+. +|.. ....+...+||+++|+|++|++||.
T Consensus 20 ~~~~v~viG~~~~D~~~~~~~-----~p~~-------------------~~~~~~~~~GG~~~NvA~~la~LG~------ 69 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEEV-----NSLS-------------------QSREYTRHFGGSPANIAVNLSRLGK------ 69 (327)
T ss_dssp --CCEEEESCCEEEEECCCCC-----SSGG-------------------GCCEEEEEEECHHHHHHHHHHHTTC------
T ss_pred CCCCEEEEccceEEEeccCCC-----CCcc-------------------ccceeeeecCcHHHHHHHHHHHcCC------
Confidence 457899999999999987653 1110 1236788999999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCc
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad 279 (479)
++.++|.||+|.+|+++++.|++.||+++++.+ .+.+|+.+++..+ +|+|+++.+++++..++++++..+.+++++
T Consensus 70 --~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 146 (327)
T 3hj6_A 70 --KVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIFELIKRSK 146 (327)
T ss_dssp --CEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHHHHHC--C
T ss_pred --cEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCHhHhccCC
Confidence 899999999999999999999999999998874 4568888887665 689999889888877887777777789999
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhh---hhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCI---ERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE 356 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~---~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~ 356 (479)
++|++++.+......+.+.++++.++++|+++++|++..... .....+.+..+++++|++++|++|++.|++..+.
T Consensus 147 ~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~- 225 (327)
T 3hj6_A 147 VFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSP- 225 (327)
T ss_dssp EEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCS-
T ss_pred EEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH-
Confidence 999999765433346788899999999999999999743210 0112345667789999999999999999986322
Q ss_pred cHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011689 357 SPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAA 436 (479)
Q Consensus 357 ~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa 436 (479)
.+.+.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 226 -~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-~~~a~~~A~a~aa 303 (327)
T 3hj6_A 226 -ENYVKRYLELGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-VKRSIKLGNGVAA 303 (327)
T ss_dssp -SGGGGGGTTTTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-THHHHHHHHCCCS
T ss_pred -HHHHHHHHhCCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-HHHHHHHHHHHHH
Confidence 22344555678999999999999999998889999999999999999999999999999999998 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHH
Q 011689 437 TVVGQQGTRLSVRHASELAESFA 459 (479)
Q Consensus 437 ~~v~~~G~~~~~p~~~el~~~l~ 459 (479)
.+|++.|+..++|+++|++++++
T Consensus 304 ~~v~~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 304 FKIRGVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp SCC--------------------
T ss_pred HHhcCCCCCCCCCCHHHHHHHhc
Confidence 99999999989999999998875
No 22
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=4.4e-44 Score=361.49 Aligned_cols=302 Identities=14% Similarity=0.165 Sum_probs=247.8
Q ss_pred CCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCC
Q 011689 118 VLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPI 197 (479)
Q Consensus 118 ~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~ 197 (479)
.++++++|+|+|++++|++..++. +| ..+ +.. .. .+...+||+++|+|++|++||.
T Consensus 2 ~~~~~~~v~viG~~~vD~~~~~~~-----~~-~~g-----------~~~---~~-~~~~~~GG~~~NvA~~la~LG~--- 57 (328)
T 3kzh_A 2 SLRKEPYLLVFGASVVDVFGFSKA-----SY-RPY-----------NST---PG-HVKISFGGVCRNIAENMARVGV--- 57 (328)
T ss_dssp --CCCCCEEEECCCEEEEEEEESS-----CC-CTT-----------SEE---EE-EEEEEEECHHHHHHHHHHHTTC---
T ss_pred CCCCCCcEEEECcEEeeeeeccCC-----CC-CCC-----------CCc---eE-EEEEccCcHHHHHHHHHHHcCC---
Confidence 356778999999999999998764 11 112 111 11 5678999999999999999999
Q ss_pred CCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEE-EecCCCCCCCCChhh--hh
Q 011689 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAML-AYQGTSSTINYDPCL--VN 273 (479)
Q Consensus 198 ~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~-~~~ga~~~l~~~~~~--~~ 273 (479)
++.++|.||+|.+|+.+++.|++.||+++++.. ++.+|+.++++++++|+|++. ..+++...++++.+. .+
T Consensus 58 -----~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (328)
T 3kzh_A 58 -----NTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKRE 132 (328)
T ss_dssp -----CEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHH
T ss_pred -----CcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHH
Confidence 899999999999999999999999999988764 455899999999989999874 345555555554432 35
Q ss_pred hccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC
Q 011689 274 LISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFS 353 (479)
Q Consensus 274 ~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~ 353 (479)
.+..++++++++.. + +.+..+++ +++.+.++++|+.+... .+.+..+++++|++++|++|++.|+|..
T Consensus 133 ~~~~~~~~~~~~~~---~---~~~~~l~~-a~~~~~~v~~D~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~ 200 (328)
T 3kzh_A 133 IFENAEYTVLDSDN---P---EIMEYLLK-NFKDKTNFILDPVSAEK-----ASWVKHLIKDFHTIKPNRHEAEILAGFP 200 (328)
T ss_dssp HHHTCSEEEEESSC---H---HHHHHHHH-HHTTTSEEEEECCSHHH-----HHTSTTTGGGCSEECCBHHHHHHHHTSC
T ss_pred hhccCCEEEEeCCc---H---HHHHHHHH-HhhcCCcEEEEeCCHHH-----HHHHHHHhcCCcEEeCCHHHHHHHHCCC
Confidence 67899999998642 2 55666666 88899999999976432 1223456789999999999999999865
Q ss_pred CCC--cHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 354 SKE--SPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 354 ~~~--~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
..+ +.+. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++
T Consensus 201 ~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-~~~a~~~ 279 (328)
T 3kzh_A 201 ITDTDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-IEDIVKF 279 (328)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-HHHHHHH
Confidence 322 2333 44566779999999999999999988888999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 431 AARIAATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 431 A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
|+++|+.+|++.|+..+.|+.+++++++++.
T Consensus 280 A~a~aa~~v~~~G~~~~~~~~~~v~~~~~~~ 310 (328)
T 3kzh_A 280 AMTMSNITISHEETIHPDMALDTVLAKLEKT 310 (328)
T ss_dssp HHHHHHHHHTSSSSSCTTCSHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCCCCcCCHHHHHHHhhhc
Confidence 9999999999999999999999999999864
No 23
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=5.3e-44 Score=356.65 Aligned_cols=293 Identities=20% Similarity=0.237 Sum_probs=243.7
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
|++|+|+|++++|++..++. +| .+++. .....+...+||+++|+|++|++||.
T Consensus 5 m~~i~viG~~~iD~~~~~~~-----~p------------~~~~~---~~~~~~~~~~GG~~~N~A~~la~LG~------- 57 (302)
T 2c4e_A 5 MEKITCVGHTALDYIFNVEK-----FP------------EPNTS---IQIPSARKYYGGAAANTAVGIKKLGV------- 57 (302)
T ss_dssp EEEEEEESCCEEEEEEECSS-----CC------------CTTCC---CCCSCEEEEEECHHHHHHHHHHHTTC-------
T ss_pred cCcEEEECceeEEEEecccc-----cC------------CCCce---eeecceeecCCCHHHHHHHHHHHCCC-------
Confidence 34799999999999998764 21 11111 12346788999999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcE
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~ 280 (479)
++.++|.||+|.+|+++++.|++.||+++++.. ++.+|+.++++++++|+|+++.+++++..++++++.. .++++
T Consensus 58 -~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~ 133 (302)
T 2c4e_A 58 -NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN---FNTEI 133 (302)
T ss_dssp -EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC---CCEEE
T ss_pred -ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc---ccCCE
Confidence 899999999999999999999999999987764 4558999999998889999888888766666554433 67999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHH
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPES 360 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~ 360 (479)
+|+++.. .+.+.++++.+++.+ ++++|++... ..+..+.++.+++++|++++|++|++.|++....+ .
T Consensus 134 v~~~~~~------~~~~~~~~~~a~~~g-~v~~D~~~~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~-~-- 201 (302)
T 2c4e_A 134 VHIATGD------PEFNLKCAKKAYGNN-LVSFDPGQDL--PQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFE-I-- 201 (302)
T ss_dssp EEECSSC------HHHHHHHHHHHBTTB-EEEECCGGGG--GGCCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-H--
T ss_pred EEEeCCC------cHHHHHHHHHHHhcC-CEEEeCchhh--hhhhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcc-H--
Confidence 9998532 367888899999999 9999987321 11113445667899999999999999998754322 1
Q ss_pred HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCC-CCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Q 011689 361 TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCV-PVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVV 439 (479)
Q Consensus 361 a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v 439 (479)
+ ++++. ++.||||+|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|+.++
T Consensus 202 ~-~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-~~~a~~~a~~~aa~~~ 278 (302)
T 2c4e_A 202 D-DYLER-VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-LEKCGLIGAATASFVV 278 (302)
T ss_dssp H-HHHTT-CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHT
T ss_pred H-HHHhc-CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHH
Confidence 1 56667 899999999999999988888899999998 999999999999999999999998 9999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHHc
Q 011689 440 GQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 440 ~~~G~~~~~p~~~el~~~l~~ 460 (479)
++.|+...+|+.+++++++++
T Consensus 279 ~~~G~~~~~p~~~ev~~~~~~ 299 (302)
T 2c4e_A 279 EAKGCQTNLPTWDKVVERLEK 299 (302)
T ss_dssp TSSSSSTTCCCHHHHHHHHHH
T ss_pred ccccccccCCCHHHHHHHHHh
Confidence 999999889999999998875
No 24
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=2.7e-43 Score=353.16 Aligned_cols=297 Identities=15% Similarity=0.178 Sum_probs=243.0
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
|+|+|+|++++|++...+. ++ .....+...+||++.|+|++|++||.
T Consensus 2 ~~v~viG~~~~D~~~~~~~----------------------~~---~~~~~~~~~~GG~~~N~A~~la~LG~-------- 48 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNPG----------------------PL---RFVNYFEKHVAGSELNFCIAVVRNHL-------- 48 (313)
T ss_dssp CCEEEECCCEEEEEESSSS----------------------CG---GGCCEEEEEEECHHHHHHHHHHHTTC--------
T ss_pred CeEEEECcceEEEecCCCC----------------------cc---cccceeEecCCChHHHHHHHHHHCCC--------
Confidence 4799999999999974221 00 11236788999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEE--ECCCCCeEEEEec--CCCCCCCCChhhhhhccC
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVL--TTPDAQRAMLAYQ--GTSSTINYDPCLVNLISK 277 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~--~~~~G~rt~~~~~--ga~~~l~~~~~~~~~l~~ 277 (479)
++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|+.+++. ++++|+|+++.+. ++...++++++....+++
T Consensus 49 ~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (313)
T 2v78_A 49 SCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRN 128 (313)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHT
T ss_pred cEEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcC
Confidence 8999999999999999999999999999988764 4589999998 8878999887665 455667777666667789
Q ss_pred CcEEEEeccccC-CcchHHHHHHHHHHHHhcCCEEEEeCCChh--hh-hhhhHHHHHHhcccCc--EEEcCHHHHHHhhC
Q 011689 278 TNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWEIVGNYAD--IVFANSDEARAFCH 351 (479)
Q Consensus 278 ad~v~i~g~~~~-~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~-~~~~~~~~~~ll~~~D--vl~~N~~Ea~~L~g 351 (479)
++++|++++.+. .+...+.+.++++.+++. ++|++... +. .....+.++.+++++| ++++|++|++.|++
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g 204 (313)
T 2v78_A 129 SRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD 204 (313)
T ss_dssp SSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS
T ss_pred CCEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC
Confidence 999999998652 122246667777766554 88986421 10 0111244566788999 99999999999998
Q ss_pred CCCCCcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 352 FSSKESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 352 ~~~~~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
. ++++. +.++++.+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++
T Consensus 205 ~---~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-~~~a~~~ 280 (313)
T 2v78_A 205 V---TDPDEAYRKYKELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-IEYSLAH 280 (313)
T ss_dssp C---CCHHHHHHHHHHTTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHH
T ss_pred C---CCHHHHHHHHHhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-HHHHHHH
Confidence 5 24444 45566778999999999999999988888999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 431 AARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 431 A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+++|+.+|++.|+...+|+.+++++++++
T Consensus 281 a~~~aa~~v~~~G~~~~~~~~~~v~~~~~~ 310 (313)
T 2v78_A 281 GIAASTLVITVRGDNELTPTLEDAERFLNE 310 (313)
T ss_dssp HHHHHHHHHTSSSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Confidence 999999999999999888999999998864
No 25
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=6e-44 Score=362.40 Aligned_cols=296 Identities=20% Similarity=0.227 Sum_probs=236.8
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
+|.+|+|+|++++|++.... ..+...+||+++|+|++|++||.
T Consensus 23 ~m~~ilviG~~~~D~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~LG~------ 65 (339)
T 1tyy_A 23 AMNKVWVIGDASVDLVPEKQ-------------------------------NSYLKCPGGASANVGVCVARLGG------ 65 (339)
T ss_dssp --CCEEEESCCEEEEEECSS-------------------------------SEEEEEEECHHHHHHHHHHHTTC------
T ss_pred ccCCEEEECcceeEEeccCC-------------------------------CceEEcCCCHHHHHHHHHHHcCC------
Confidence 34589999999999998521 14567899999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEec--CCCCCCCCChhhhhhccC
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLISK 277 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~--ga~~~l~~~~~~~~~l~~ 277 (479)
++.++|.||+|.+|+++++.|++.||++.++.+ .+.+|+.+++.++++|+|++..+. +++..++++ ....+.+
T Consensus 66 --~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~ 141 (339)
T 1tyy_A 66 --ECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQ 141 (339)
T ss_dssp --CEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCT
T ss_pred --CeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhcc
Confidence 899999999999999999999999999998876 456899999988878999877665 444444433 3345788
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh-hh--hhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT-CI--ERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~-~~--~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
+++||++++.+......+.+.++++.+++.+.++++|++... +. .....+.++.+++++|++++|++|++.|++..
T Consensus 142 ~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~- 220 (339)
T 1tyy_A 142 YEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGAS- 220 (339)
T ss_dssp TCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCS-
T ss_pred CCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCC-
Confidence 999999987543222357788999999999999999997421 00 01123445667899999999999999999864
Q ss_pred CCcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcC-----CChHHHHH
Q 011689 355 KESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRG-----VSDLKGMG 428 (479)
Q Consensus 355 ~~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g-----~~~l~eAl 428 (479)
+++. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++| ++ +++|+
T Consensus 221 --~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-l~~a~ 297 (339)
T 1tyy_A 221 --HWQDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-LAEAI 297 (339)
T ss_dssp --SGGGGSSTTGGGTCSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-HHHHH
T ss_pred --CHHHHHHHHHHcCCCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-HHHHH
Confidence 2333 344556799999999999999999888889999999999999999999999999999997 76 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHcc
Q 011689 429 ALAARIAATVVGQQGTRLSVRHASELAESFAYR 461 (479)
Q Consensus 429 ~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~ 461 (479)
++|+++|+.+|++.|+...+|+.+++++++++.
T Consensus 298 ~~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 330 (339)
T 1tyy_A 298 SNANACGAMAVTAKGAMTALPFPDQLNTFLSSH 330 (339)
T ss_dssp HHHHHHHHHGGGSSSTTTTCCCHHHHHHHHC--
T ss_pred HHHHHHHHHHhCCCCCCCCCCCHHHHHHHHhcC
Confidence 999999999999999998899999999988653
No 26
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=5.1e-43 Score=351.28 Aligned_cols=297 Identities=22% Similarity=0.297 Sum_probs=245.8
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
++|+|+|++++|++...+. ++ .....+...+||+++|+|++|++||.
T Consensus 2 ~~v~viG~~~iD~~~~~~g----------------------~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 48 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEEG----------------------DL---KDVRLFEKHPGGAPANVAVGVSRLGV-------- 48 (313)
T ss_dssp CEEEEESCCEEEEEESSSS----------------------CT---TTCCEEEEEEECHHHHHHHHHHHTTC--------
T ss_pred CcEEEECceeeeeecCCCC----------------------Cc---ccccceeecCCCHHHHHHHHHHHCCC--------
Confidence 5799999999999976322 11 12346789999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCC-CCCCCCChhhhhhccCCcE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGT-SSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga-~~~l~~~~~~~~~l~~ad~ 280 (479)
++.++|.||+|.+|+++++.|++.||+++++.+ .+.+|+.+++.++. |+|+++.+++. ...++++++....++++++
T Consensus 49 ~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~ 127 (313)
T 3ewm_A 49 KSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINWDIVEEAKI 127 (313)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCHHHHHHCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCHHHhCCCCE
Confidence 899999999999999999999999999998864 56699999988775 99999888774 3567777776677889999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh--hh--hhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCC
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CI--ERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKE 356 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~--~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~ 356 (479)
+|++++.+......+.+.++++.++ .+.++++|++... +. .....+.++.+++++|++++|++|++.|++....
T Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~- 205 (313)
T 3ewm_A 128 VNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE- 205 (313)
T ss_dssp EEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC-
T ss_pred EEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc-
Confidence 9999986544334678889999888 4799999997421 10 1111245567788999999999999999874311
Q ss_pred cHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHH--cCCChHHHHHHHHHHH
Q 011689 357 SPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGIL--RGVSDLKGMGALAARI 434 (479)
Q Consensus 357 ~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~--~g~~~l~eAl~~A~a~ 434 (479)
..+...||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|+ +|++ +++|+++|+++
T Consensus 206 ---------~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-l~~a~~~A~~~ 275 (313)
T 3ewm_A 206 ---------VKGSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-LLKLGKFANLV 275 (313)
T ss_dssp ---------CCCSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-HHHHHHHHHHH
T ss_pred ---------ccCceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-HHHHHHHHHHH
Confidence 12356689999999999999999999999999999999999999999999999 9998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHccccccc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAYRIKSST 466 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~~~~~~~ 466 (479)
|+++|++.|+.. +|+++|+++++++.-..++
T Consensus 276 aa~~v~~~G~~~-~p~~~ev~~~l~~~~~~~~ 306 (313)
T 3ewm_A 276 AALSTQKRGAWS-TPRKDELLKYKEAREVLAE 306 (313)
T ss_dssp HHHHTTSCSSCC-CCCHHHHTTSHHHHHHHC-
T ss_pred HHHHHccCCCCC-CCCHHHHHHHHHHHHHHhc
Confidence 999999999965 8999999999987655443
No 27
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=1.7e-42 Score=350.21 Aligned_cols=289 Identities=20% Similarity=0.280 Sum_probs=241.1
Q ss_pred CCCCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHh--C
Q 011689 116 ASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL--G 193 (479)
Q Consensus 116 ~~~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~L--G 193 (479)
.+++++|++|+|||++++|++... + + ..+...+||+++|+|++|++| |
T Consensus 17 ~y~~~~m~~i~viG~~~iD~~~~~------------~-----------~-------~~~~~~~GG~~~NvA~~la~Lg~G 66 (328)
T 4e69_A 17 NLYFQSMMHILSIGECMAELAPAD------------L-----------P-------GTYRLGFAGDTFNTAWYLARLRPE 66 (328)
T ss_dssp CSSCBSSCEEEEESCCEEEEEECS------------S-----------T-------TEEEEEEECHHHHHHHHHHHHCTT
T ss_pred ccccccCCcEEEecCcEEEEecCC------------C-----------C-------CceEEecCCHHHHHHHHHHhcCCC
Confidence 455667789999999999999851 1 0 156788999999999999999 8
Q ss_pred CCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEEEecCCCC---CCCCCh
Q 011689 194 GKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSS---TINYDP 269 (479)
Q Consensus 194 ~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~~~~ga~~---~l~~~~ 269 (479)
. ++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|+.+++.++ +|+|+++.+++.+. .++..+
T Consensus 67 ~--------~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~ 137 (328)
T 4e69_A 67 S--------RISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDAD 137 (328)
T ss_dssp S--------EEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHH
T ss_pred C--------cEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccc
Confidence 8 8999999999999999999999999999988765 458999999998 89999998887642 234444
Q ss_pred hhhhhccCCcEEEEeccccCC--cchHHHHHHHHHHHHhcCCEEEEeCCChh--h-hhhhhHHHHHHhcccCcEEEcCHH
Q 011689 270 CLVNLISKTNIFIVEGYLFEL--PDTIRTITKACEVAHRSGALVAVTASDVT--C-IERHYDDFWEIVGNYADIVFANSD 344 (479)
Q Consensus 270 ~~~~~l~~ad~v~i~g~~~~~--~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~-~~~~~~~~~~~ll~~~Dvl~~N~~ 344 (479)
.....+++++++|++|+.+.. +...+.+.++++.+++.+.++++||+... + ......+.++.+++++|++++|++
T Consensus 138 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~ 217 (328)
T 4e69_A 138 ALAAAMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFE 217 (328)
T ss_dssp HHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHH
T ss_pred cchHHhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHH
Confidence 445678899999999986432 22367888999999999999999996211 1 011123456678899999999999
Q ss_pred HHHHhhCCCCCCcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCC-CCCCCccchhHHHHHHHHHHHHcCCC
Q 011689 345 EARAFCHFSSKESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSP-CVPVDTCGAGDAYASGILYGILRGVS 422 (479)
Q Consensus 345 Ea~~L~g~~~~~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~ 422 (479)
|++.|+|.. +.+. +.++.+.+++.||||+|++|++++++++.+++|+++ ++++|||||||+|+|||+++|++|++
T Consensus 218 E~~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~ 294 (328)
T 4e69_A 218 DEAAWFGDA---GPDATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP 294 (328)
T ss_dssp HHHHHHTCS---SHHHHHHHHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCC---CHHHHHHHHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC
Confidence 999999853 4544 455667789999999999999999999999999986 78999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCC
Q 011689 423 DLKGMGALAARIAATVVGQQGTRLS 447 (479)
Q Consensus 423 ~l~eAl~~A~a~Aa~~v~~~G~~~~ 447 (479)
+++|+++|+++|+.+|++.|+.++
T Consensus 295 -l~~a~~~A~~~aa~~v~~~Ga~~p 318 (328)
T 4e69_A 295 -LETAIAAAAALAGQVVQGKGALVE 318 (328)
T ss_dssp -HHHHHHHHHHHHHHHHTSSSSSCC
T ss_pred -HHHHHHHHHHHHHHHHccCCCcCC
Confidence 999999999999999999999864
No 28
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=1.2e-43 Score=358.86 Aligned_cols=297 Identities=24% Similarity=0.299 Sum_probs=244.6
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+++++|+|+|++++|++..++. +|. +++. .....+...+||+++|+|++|++||.
T Consensus 22 ~~~~~vlviG~~~iD~~~~~~~-----~p~------------~g~~---~~~~~~~~~~GG~~~NvA~~la~LG~----- 76 (331)
T 2fv7_A 22 EEVAAVVVVGSCMTDLVSLTSR-----LPK------------TGET---IHGHKFFIGFGGKGANQCVQAARLGA----- 76 (331)
T ss_dssp --CCSEEEECCCEEEEEEECSS-----CCC------------TTCC---CCCSEEEEEEECHHHHHHHHHHHTTC-----
T ss_pred cccCCEEEECcccEEEEEecCC-----CCC------------CCce---EecCceEECcCCHHHHHHHHHHHCCC-----
Confidence 4557899999999999998764 221 1111 12236788999999999999999999
Q ss_pred CCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh--hhcc
Q 011689 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--NLIS 276 (479)
Q Consensus 200 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~--~~l~ 276 (479)
++.++|.||+|.+|+++++.|++.||++.++.+ .+.+|+.++++++++|+|+++.+++++..++++++.. +.+.
T Consensus 77 ---~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~ 153 (331)
T 2fv7_A 77 ---MTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVIS 153 (331)
T ss_dssp ---CEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHH
T ss_pred ---CeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhc
Confidence 899999999999999999999999999998875 4568999999999889999998888776676655432 3467
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC-
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK- 355 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~- 355 (479)
+++++++++. .+ .+.+..+++.+++.+.++++|++... ..+ .+.+++++|++++|++|++.|++....
T Consensus 154 ~~~~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~Dp~~~~--~~~----~~~ll~~~dil~~N~~Ea~~l~g~~~~~ 222 (331)
T 2fv7_A 154 RAKVMVCQLE---IT--PATSLEALTMARRSGVKTLFNPAPAI--ADL----DPQFYTLSDVFCCNESEAEILTGLTVGS 222 (331)
T ss_dssp HCSEEEECSS---SC--HHHHHHHHHHHHHTTCEEEECCCSCC--TTC----CTHHHHTCSEEEEEHHHHHHHHSSCCCS
T ss_pred cCCEEEEecC---CC--HHHHHHHHHHHHHcCCEEEEeCCccc--ccc----hHHHHhcCCEEEeCHHHHHHHhCCCCCC
Confidence 8999999743 33 57788899999999999999997531 111 124568999999999999999986432
Q ss_pred -CcHHH-HHHHHhcCCCEEEEeecCCCeEEEECC--eEEEeCCCCCCCCCccchhHHHHHHHHHHHHcC--CChHHHHHH
Q 011689 356 -ESPES-TTRYLSHFVPLVSVTDGARGSYIGVKG--EAVYIPPSPCVPVDTCGAGDAYASGILYGILRG--VSDLKGMGA 429 (479)
Q Consensus 356 -~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g--~~~l~eAl~ 429 (479)
++.+. +.++++.+++.||||+|++|++++.++ +.+++|+++++++|||||||+|+|||+++|++| ++ +++|++
T Consensus 223 ~~~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-~~~a~~ 301 (331)
T 2fv7_A 223 AADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-LEDMLN 301 (331)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-HHHHHH
T ss_pred hhHHHHHHHHHHHcCCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-HHHHHH
Confidence 12333 455667799999999999999998877 788899999999999999999999999999999 98 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 011689 430 LAARIAATVVGQQGTRLSVRHASELAE 456 (479)
Q Consensus 430 ~A~a~Aa~~v~~~G~~~~~p~~~el~~ 456 (479)
+|+++|+.+|++.|+...+|+.+++++
T Consensus 302 ~A~~~aa~~v~~~G~~~~~p~~~ev~~ 328 (331)
T 2fv7_A 302 RSNFIAAVSVQAAGTQSSYPYKKDLPL 328 (331)
T ss_dssp HHHHHHHHHHTSSSGGGGCCCGGGSCG
T ss_pred HHHHHHHHHhCCCCCccCCCCHHHHhh
Confidence 999999999999999888899888754
No 29
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1e-42 Score=349.87 Aligned_cols=298 Identities=22% Similarity=0.181 Sum_probs=241.5
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
++|+|+|++++|++..++. .+ .++. .. .. .+...+||+++|+|++|++||.
T Consensus 4 ~~i~viG~~~~D~~~~~~~-----~~-~~~~-----------~~---~~-~~~~~~GG~~~NvA~~la~LG~-------- 54 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIET-----ET-APGA-----------SN---PG-SWMEEAGGGGFNAARNLSRLGF-------- 54 (317)
T ss_dssp CEEEEESCCEEEEEEEESS-----SC-CTTS-----------CC---CE-EEEEEEECHHHHHHHHHHHTTC--------
T ss_pred CeEEEECchheEEeeccCC-----CC-CCCC-----------Cc---eE-eEEEeCCcHHHHHHHHHHhcCC--------
Confidence 4799999999999988653 11 1111 10 11 3678899999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecC-CCCCCCCChhh--h--hhccC
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQG-TSSTINYDPCL--V--NLISK 277 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~g-a~~~l~~~~~~--~--~~l~~ 277 (479)
++.++|.||+|.+|+++++.|++.||++++++.++.+|+.++++++++|+|++..+.+ .+..++++.+. . +.+..
T Consensus 55 ~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (317)
T 2nwh_A 55 EVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIA 134 (317)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHH
T ss_pred CcEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhcc
Confidence 8999999999999999999999999999985556679999999999889998776654 34456554332 2 45778
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCc
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKES 357 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~ 357 (479)
++++++++. .+ .+.+..+++.+++.+.++++|+++.... +.++.+++++|++++|++|++.|++....+.
T Consensus 135 ~~~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~Dp~~~~~~-----~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~ 204 (317)
T 2nwh_A 135 SDFLLCDAN---LP--EDTLTALGLIARACEKPLAAIAISPAKA-----VKLKAALGDIDILFMNEAEARALTGETAENV 204 (317)
T ss_dssp CSEEEEETT---SC--HHHHHHHHHHHHHTTCCEEEECCSHHHH-----GGGTTTGGGCSEEEEEHHHHHHHHC-----C
T ss_pred CCEEEEeCC---CC--HHHHHHHHHHHHhcCCeEEEeCCCHHHH-----HHHHHHhhhCeEecCCHHHHHHHhCCChhHH
Confidence 999999853 23 5778899999999999999999864221 2234577899999999999999998621222
Q ss_pred HHHHHHHHhcCCCEEEEeecCCCeEEEECC-eEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 011689 358 PESTTRYLSHFVPLVSVTDGARGSYIGVKG-EAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAA 436 (479)
Q Consensus 358 ~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~-~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa 436 (479)
.+.+.++++.+++.||||+|++|+++++++ ..+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 205 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-~~~a~~~A~~~aa 283 (317)
T 2nwh_A 205 RDWPNILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-IREALRQGAAAAA 283 (317)
T ss_dssp TTHHHHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-HHHHHHHHHHHHH
Confidence 234556677899999999999999998765 46889999999999999999999999999999998 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHHc
Q 011689 437 TVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 437 ~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
.+|++.|+....|+.+++++++..
T Consensus 284 ~~v~~~G~~~~~~~~~~v~~~~~~ 307 (317)
T 2nwh_A 284 ITVQSSFATSQDLSKDSVEAMLGL 307 (317)
T ss_dssp HHHSSTTCCGGGCCHHHHHHHHTT
T ss_pred HHHcCCCCCCCCCCHHHHHhHhhh
Confidence 999999999888999999886544
No 30
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=9e-43 Score=348.83 Aligned_cols=296 Identities=15% Similarity=0.209 Sum_probs=242.0
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
++|+|+|++++|++...+. +. .....+...+||++.|+|++|++||.
T Consensus 2 ~~v~viG~~~~D~~~~~~~----------------------~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 48 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPG----------------------PL---RHVSYFEKHVAGSEANYCVAFIKQGN-------- 48 (311)
T ss_dssp CEEEEESCCEEEEEESSSS----------------------CG---GGCCEEEEEEECHHHHHHHHHHHTTC--------
T ss_pred CCEEEECCceEEEecCCCC----------------------cc---cccceeeecCCChHHHHHHHHHHCCC--------
Confidence 4799999999999984221 00 11236778999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCC--eEEEEec--CCCCCCCCChhhhhhccC
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQ--RAMLAYQ--GTSSTINYDPCLVNLISK 277 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~--rt~~~~~--ga~~~l~~~~~~~~~l~~ 277 (479)
++.++|.||+|.+|+++++.|++.||+++++.+ ++.+|+.+++.++++|+ |+++.+. ++...++++++....+++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 128 (311)
T 2dcn_A 49 ECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKS 128 (311)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTT
T ss_pred ceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcC
Confidence 899999999999999999999999999998875 45689999999988898 8887665 455667777666667889
Q ss_pred CcEEEEeccccCC-cchHHHHHHHHHHHHhcCCEEEEeCCChh--hhhhhhHHHHHHhcc--cCcEEEcCHHHHHHhhCC
Q 011689 278 TNIFIVEGYLFEL-PDTIRTITKACEVAHRSGALVAVTASDVT--CIERHYDDFWEIVGN--YADIVFANSDEARAFCHF 352 (479)
Q Consensus 278 ad~v~i~g~~~~~-~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea~~L~g~ 352 (479)
++++|++++.+.. +...+.+.++++.+++. ++|++... +......+.++.+++ ++|++++|++|++.|++.
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~ 204 (311)
T 2dcn_A 129 ADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGE 204 (311)
T ss_dssp CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC
T ss_pred CCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCC
Confidence 9999999986532 22246677777776654 88986421 111111234556788 999999999999999985
Q ss_pred CCCCcHHHH-HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHH
Q 011689 353 SSKESPEST-TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALA 431 (479)
Q Consensus 353 ~~~~~~~~a-~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A 431 (479)
++++.+ .++++. ++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|
T Consensus 205 ---~~~~~~~~~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-~~~a~~~a 279 (311)
T 2dcn_A 205 ---SDPDKAAKAFSDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-MEKALDYA 279 (311)
T ss_dssp ---CCHHHHHHHHTTT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-HHHHHHHH
T ss_pred ---CCHHHHHHHHHHh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-HHHHHHHH
Confidence 345544 445566 889999999999999998888999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 432 ARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 432 ~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+++|+.++++.|+...+|+.+++++++++
T Consensus 280 ~~~aa~~v~~~G~~~~~~~~~~v~~~~~~ 308 (311)
T 2dcn_A 280 IVASTLNVMIRGDQENLPTTKDIETFLRE 308 (311)
T ss_dssp HHHHHHHTTSSSSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHHHh
Confidence 99999999999999889999999988864
No 31
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.5e-42 Score=347.84 Aligned_cols=290 Identities=19% Similarity=0.262 Sum_probs=241.5
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
.+|+|+|++++|+++.++. +|. +++. .....+...+||+++|+|++|++||.
T Consensus 15 ~~v~vvG~~~iD~~~~~~~-----~p~------------~g~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 66 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLKVDH-----FTK------------PGET---QKAIEMNVFPGGKGANQAVTVAKIGE-------- 66 (311)
T ss_dssp CCEEEECCCEEEEEEECSS-----CCC------------TTCE---EECSEEEEEEECHHHHHHHHHHHHHS--------
T ss_pred CCEEEECcceeeEEEeccc-----CCC------------CCce---EecCeeeecCCCHHHHHHHHHHHcCC--------
Confidence 4599999999999998765 221 1221 12346788999999999999999999
Q ss_pred c-EEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcE
Q 011689 203 N-VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 203 ~-v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~ 280 (479)
+ +.++|.||+|.+|+.+++.|++.|| ++.+ ++.+|+.++++++++|+|+++.+++++..++++++..+.++++++
T Consensus 67 ~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~~~~~ 143 (311)
T 1vm7_A 67 KGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSESDI 143 (311)
T ss_dssp SCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTTCSE
T ss_pred CceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhChhhcccCCE
Confidence 8 9999999999999999999999999 5554 567999999999988999999998887777776665566789999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC--CCCcH
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFS--SKESP 358 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~--~~~~~ 358 (479)
+++++. .+ .+.+.++ +++.+.++++|++.. . .....+++++|++++|++|++.|++.. ..++.
T Consensus 144 v~~~~~---~~--~~~~~~~---a~~~~~~v~~Dp~~~---~----~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~ 208 (311)
T 1vm7_A 144 LLLQNE---IP--FETTLEC---AKRFNGIVIFDPAPA---Q----GINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTV 208 (311)
T ss_dssp EEECSS---SC--HHHHHHH---HHHCCSEEEECCCSC---T----TCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCH
T ss_pred EEEeCC---CC--HHHHHHH---HHHcCCEEEEeCcch---h----hhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHH
Confidence 999753 23 3333333 788899999999752 1 122346789999999999999998742 22344
Q ss_pred HH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 011689 359 ES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAAT 437 (479)
Q Consensus 359 ~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~ 437 (479)
+. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.
T Consensus 209 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-~~~a~~~A~~~aa~ 287 (311)
T 1vm7_A 209 EKAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-PEEAVIFGTAAAAI 287 (311)
T ss_dssp HHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHH
Confidence 44 55677789999999999999999988888899999999999999999999999999999998 99999999999999
Q ss_pred HhcccCCCCCCCCHHHHHHHHH
Q 011689 438 VVGQQGTRLSVRHASELAESFA 459 (479)
Q Consensus 438 ~v~~~G~~~~~p~~~el~~~l~ 459 (479)
++++.|+...+|+.++++++++
T Consensus 288 ~v~~~G~~~~~p~~~ev~~~l~ 309 (311)
T 1vm7_A 288 SVTRLGAQSSIPAREEVEAFLK 309 (311)
T ss_dssp HTTSSSSGGGCCCHHHHHHHHH
T ss_pred HhCcCCccccCCCHHHHHHHHh
Confidence 9999999888999999999876
No 32
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=4.4e-42 Score=347.87 Aligned_cols=311 Identities=21% Similarity=0.190 Sum_probs=247.3
Q ss_pred CCCCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCC
Q 011689 118 VLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPI 197 (479)
Q Consensus 118 ~~~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~ 197 (479)
+++++|+|+|+|++++|+++.++..+.+.+- .+. .+..++ ......+...+||++.|+|++|++||.
T Consensus 6 ~~~~~m~i~v~G~~~~D~~~~~~~~~~~~~~--~~~-----~~~~~~---~~~~~~~~~~~GG~~~NvA~~la~LG~--- 72 (334)
T 2pkf_A 6 YFQSHMTIAVTGSIATDHLMRFPGRFSEQLL--PEH-----LHKVSL---SFLVDDLVMHRGGVAGNMAFAIGVLGG--- 72 (334)
T ss_dssp SSCCSSEEEEESCCEEEEEEECSSCTHHHHT--TSC-----GGGCCC---CCCCSEEEEEEECHHHHHHHHHHHTTC---
T ss_pred cCccCCeEEEECChhheEEEecChHHhhhhc--hhh-----cccccc---ccccccceecCCChHHHHHHHHHHcCC---
Confidence 3445568999999999999987433332221 110 111111 112246778999999999999999999
Q ss_pred CCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhh--h
Q 011689 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVN--L 274 (479)
Q Consensus 198 ~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~--~ 274 (479)
++.++|.||+| +|+ +++.|++.||+++++.+. +.+|+.++++++++|+|++..+++++..++.+++... .
T Consensus 73 -----~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~ 145 (334)
T 2pkf_A 73 -----EVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSA 145 (334)
T ss_dssp -----EEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHH
T ss_pred -----CeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhh
Confidence 89999999999 999 999999999999988754 5689999999988899988778877666655554332 3
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
+++++++|++++. .+.+.++++.+++.+.++++|++... ..+..+.++.+++++|++++|++|++.|++...
T Consensus 146 l~~~~~v~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~--~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~ 217 (334)
T 2pkf_A 146 IGKPELVIIGAND------PEAMFLHTEECRKLGLAFAADPSQQL--ARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTG 217 (334)
T ss_dssp HCSCSEEEEESCC------HHHHHHHHHHHHHHTCCEEEECGGGG--GTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHC
T ss_pred hcCCCEEEEcCCC------hHHHHHHHHHHHhcCCeEEEeccchh--hhhhHHHHHHHHhcCCEEecCHHHHHHHhccCC
Confidence 5789999998653 46778888999999999999986421 111234456788999999999999999987532
Q ss_pred CCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCe-EEEeCCCCCC-CCCccchhHHHHHHHHHHHHcCCChHHHHHHHHH
Q 011689 355 KESPESTTRYLSHFVPLVSVTDGARGSYIGVKGE-AVYIPPSPCV-PVDTCGAGDAYASGILYGILRGVSDLKGMGALAA 432 (479)
Q Consensus 355 ~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~-~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~ 432 (479)
. +.+ ++++ +++.||||+|++|++++.+++ .+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+
T Consensus 218 ~-~~~---~l~~-~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-~~~a~~~A~ 291 (334)
T 2pkf_A 218 W-SEA---DVMA-QIDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-LERSAQLGS 291 (334)
T ss_dssp C-CHH---HHHT-TCSCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHH
T ss_pred C-CHH---HHHh-cCCEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-HHHHHHHHH
Confidence 2 222 2333 489999999999999988777 8899999987 789999999999999999999998 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHHccc
Q 011689 433 RIAATVVGQQGTRLSVRHASELAESFAYRI 462 (479)
Q Consensus 433 a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~ 462 (479)
++|+.+|++.|+...+|+.+++++++++.+
T Consensus 292 ~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~ 321 (334)
T 2pkf_A 292 LVAVLVLESTGTQEWQWDYEAAASRLAGAY 321 (334)
T ss_dssp HHHHHHHTSSSSSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCCCCHHHHHHHHHHHH
Confidence 999999999999988999999999998653
No 33
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=6.9e-42 Score=345.40 Aligned_cols=305 Identities=19% Similarity=0.217 Sum_probs=243.2
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
+|+|+|++++|+++.++..+.+.+ ..+. .+.+++ ......+...+||+++|+|++|++||. +
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~--~~~~-----~p~~~~---~~~~~~~~~~~GG~~~NvA~~la~LG~--------~ 63 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHI--LPDQ-----VHLINL---SFLVPTMRREFGGCAGNIAYALNLLGG--------D 63 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGC--CTTS-----SSSCEE---EEECCSCCCEEECHHHHHHHHHHHTTC--------C
T ss_pred cEEEECcceEEEEEecchhhhhhc--cccc-----cCCCCc---ceecccceeccCCHHHHHHHHHHHcCC--------C
Confidence 699999999999998743332222 1110 111111 112235677899999999999999999 8
Q ss_pred EEEEEEeCC-CchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEE
Q 011689 204 VAMTGSVGS-DPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIF 281 (479)
Q Consensus 204 v~~ig~VG~-D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v 281 (479)
+.++|.||+ | +|+ +++.|++.||+++++.+. +.+|+.++++++++|++++..+++++..+++.++.. . .+++++
T Consensus 64 ~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~-~-~~~~~v 139 (326)
T 3b1n_A 64 ARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE-A-KDIKLA 139 (326)
T ss_dssp EEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG-C-CSCSEE
T ss_pred eeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc-c-cCCCEE
Confidence 999999999 9 899 999999999999988754 568999999999888998877777765555544432 2 789999
Q ss_pred EEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHHHH
Q 011689 282 IVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPEST 361 (479)
Q Consensus 282 ~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~~a 361 (479)
|++++. .+.+.++++.+++.|.++++|++... ..+..+.++.+++++|++++|++|++.|++.... +.+
T Consensus 140 ~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~--~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~-~~~-- 208 (326)
T 3b1n_A 140 IVGPDG------FQGMVQHTEELAQAGVPFIFDPGQGL--PLFDGATLRRSIELATYIAVNDYEAKLVCDKTGW-SED-- 208 (326)
T ss_dssp EECSCC------HHHHHHHHHHHHHHTCCEEECCGGGG--GGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCC-CHH--
T ss_pred EECCcc------HHHHHHHHHHHHHCCCEEEEeCchhh--hhccHHHHHHHHHhCCEEecCHHHHHHHhCCCCC-CHH--
Confidence 998642 46778889999999999999986421 1112344566788999999999999999875322 222
Q ss_pred HHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCC-CCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhc
Q 011689 362 TRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCV-PVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATVVG 440 (479)
Q Consensus 362 ~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~ 440 (479)
++++ +++.||||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|+.+|+
T Consensus 209 -~l~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-~~~a~~~A~~~aa~~v~ 285 (326)
T 3b1n_A 209 -EIAS-RVQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-WATAGRLASLMGALKIA 285 (326)
T ss_dssp -HHHT-TSSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHT
T ss_pred -HHHh-cCCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHc
Confidence 2333 4899999999999999998888999999986 789999999999999999999998 99999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHHccccc
Q 011689 441 QQGTRLSVRHASELAESFAYRIKS 464 (479)
Q Consensus 441 ~~G~~~~~p~~~el~~~l~~~~~~ 464 (479)
+.|+....|+.+++++++++.+..
T Consensus 286 ~~G~~~~~~~~~ev~~~l~~~~~~ 309 (326)
T 3b1n_A 286 HQGPQTYAPTRAEIDARFETAFGY 309 (326)
T ss_dssp SSSTTCCCCCHHHHHHHHHHHHSS
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999998899999999999876544
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=1.4e-41 Score=341.68 Aligned_cols=291 Identities=18% Similarity=0.150 Sum_probs=241.4
Q ss_pred cEEEEcCceeee-eeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 124 DVLGLGQAMVDF-SGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 124 ~IlviG~~~iD~-i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
-+.+.+++++|+ ++.++. + ++|.. .....+...+||++.|+|++|++||.
T Consensus 4 i~tvt~np~iD~~~~~v~~-----~--~~g~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~-------- 54 (320)
T 3ie7_A 4 IYTITLNPAIDRLLFIRGE-----L--EKRKT--------------NRVIKTEFDCGGKGLHVSGVLSKFGI-------- 54 (320)
T ss_dssp EEEEESSCEEEEEEEESSS-----C--CTTSC--------------CCCSEEEEEEESHHHHHHHHHHHHTC--------
T ss_pred EEEEecchHHeeeEEEcCC-----c--cCCCe--------------eEeceeeecCCchHHHHHHHHHHcCC--------
Confidence 467779999999 998875 2 23322 12346889999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCC--eEEEEecCCCCCCCCChhh------hhh
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ--RAMLAYQGTSSTINYDPCL------VNL 274 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~--rt~~~~~ga~~~l~~~~~~------~~~ 274 (479)
++.++|.||+| +|+.+++.|++.||+++++...+.+|+.++++++ +|+ |+++..+++ .++.+++. .+.
T Consensus 55 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~ 130 (320)
T 3ie7_A 55 KNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGF--TVSQTNKDNLLKQIAKK 130 (320)
T ss_dssp CEEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCC--CCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCC--CCCHHHHHHHHHHHHHH
Confidence 89999999998 9999999999999999998333448999999998 788 888777664 45544432 256
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
+.+++++|++|+.+... ..+.+.++++.+++.|.++++|++.. .+.+.+..++|++++|++|++.|+|...
T Consensus 131 ~~~~~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~--------~l~~~l~~~~dil~~N~~E~~~l~g~~~ 201 (320)
T 3ie7_A 131 VKKEDMVVIAGSPPPHY-TLSDFKELLRTVKATGAFLGCDNSGE--------YLNLAVEMGVDFIKPNEDEVIAILDEKT 201 (320)
T ss_dssp CCTTCEEEEESCCCTTC-CHHHHHHHHHHHHHHTCEEEEECCHH--------HHHHHHHHCCSEECCBTTGGGGGSCTTC
T ss_pred hcCCCEEEEeCCCCCCC-CHHHHHHHHHHHHhcCCEEEEECChH--------HHHHHHhcCCeEEeeCHHHHHHHhCCCc
Confidence 78999999999864322 36788999999999999999999632 1222233499999999999999998754
Q ss_pred CCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 355 KESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 355 ~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
..+.+.+.++++. ++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 202 ~~~~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-~~~a~~~A~a~ 279 (320)
T 3ie7_A 202 NSLEENIRTLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-ITETLKVATGC 279 (320)
T ss_dssp CCHHHHHHHHTTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHH
T ss_pred CCCHHHHHHHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 3245556666655 899999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+++|++.|+ ..|+.+++++++++
T Consensus 280 aa~~v~~~G~--~~~~~~ev~~~~~~ 303 (320)
T 3ie7_A 280 SASKVMQQDS--SSFDLEAAGKLKNQ 303 (320)
T ss_dssp HHHHHTSSSS--SCCCHHHHHHHGGG
T ss_pred HHHHHhCcCC--CCCCHHHHHHHhhC
Confidence 9999999994 58999999999875
No 35
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=3.2e-42 Score=346.36 Aligned_cols=282 Identities=18% Similarity=0.237 Sum_probs=229.4
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhC----CCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLG----GKPI 197 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG----~~~~ 197 (479)
.++|+|+|++++|++... ..+...+||+++|+|++|++|| .
T Consensus 4 ~~~i~viG~~~~D~~~~~--------------------------------~~~~~~~GG~~~NvA~~la~LG~~~~~--- 48 (319)
T 3lhx_A 4 SKKIAVIGECMIELSEKG--------------------------------ADVKRGFGGDTLNTSVYIARQVDPAAL--- 48 (319)
T ss_dssp CEEEEEESCCEEEEEC-----------------------------------CCEEEEECHHHHHHHHHHTTSCTTTE---
T ss_pred cCceeeechhhhhhccCC--------------------------------CceEEecCChHHHHHHHHHHcCCCCCC---
Confidence 357999999999998642 1467889999999999999999 7
Q ss_pred CCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEEEECCCCCeEEEEecCCC---CCCCCChh--h
Q 011689 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIVLTTPDAQRAMLAYQGTS---STINYDPC--L 271 (479)
Q Consensus 198 ~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~~~~~G~rt~~~~~ga~---~~l~~~~~--~ 271 (479)
++.++|.||+|.+|+.+++.|++.||+++++.+.+ .+|+.+++.++++|+|+++.+++.. ..++..++ .
T Consensus 49 -----~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 123 (319)
T 3lhx_A 49 -----TVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAI 123 (319)
T ss_dssp -----EEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHH
T ss_pred -----cEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhH
Confidence 89999999999999999999999999999887654 5899999998888999999888753 23444433 2
Q ss_pred hhhccCCcEEEEeccccCC--cchHHHHHHHHHHHHhcCCEEEEeCCChh--h-hhhhhHHHHHHhcccCcEEEcCHHHH
Q 011689 272 VNLISKTNIFIVEGYLFEL--PDTIRTITKACEVAHRSGALVAVTASDVT--C-IERHYDDFWEIVGNYADIVFANSDEA 346 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~--~~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~-~~~~~~~~~~~ll~~~Dvl~~N~~Ea 346 (479)
.+.++++++||++|+.+.. +...+.+.++++.+++.|.++++|++... + ......+.++.+++++|++++|++|+
T Consensus 124 ~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~ 203 (319)
T 3lhx_A 124 CEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDE 203 (319)
T ss_dssp HHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHH
Confidence 3568899999999986532 22357889999999999999999997321 1 01122345667889999999999999
Q ss_pred HHhhCCCCCCcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEE-EeCCC---CCCCCCccchhHHHHHHHHHHHHcCC
Q 011689 347 RAFCHFSSKESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAV-YIPPS---PCVPVDTCGAGDAYASGILYGILRGV 421 (479)
Q Consensus 347 ~~L~g~~~~~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~-~vpa~---~v~vvDttGAGDaF~Agfl~~l~~g~ 421 (479)
+.|+|.. +.+. +.++++.|++.||||+|++|++++++++.+ ++|++ +++++|||||||+|+|||+++|++|+
T Consensus 204 ~~l~g~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 280 (319)
T 3lhx_A 204 DALWGQQ---PVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGG 280 (319)
T ss_dssp HHHHCCC---CHHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTC
T ss_pred HHHhCCC---CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCC
Confidence 9999853 4444 556777899999999999999999887654 88886 56899999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhcccCCCCC
Q 011689 422 SDLKGMGALAARIAATVVGQQGTRLS 447 (479)
Q Consensus 422 ~~l~eAl~~A~a~Aa~~v~~~G~~~~ 447 (479)
+ +++|+++|+++|+.+|++.|+.++
T Consensus 281 ~-~~~a~~~A~~~aa~~v~~~Ga~~~ 305 (319)
T 3lhx_A 281 S-AENAAKRGHLTASTVIQYRGAIIP 305 (319)
T ss_dssp C-HHHHHHHHHHHHHHHTTSSSSSCC
T ss_pred C-HHHHHHHHHHHHHhhhccCCCcCC
Confidence 8 999999999999999999998753
No 36
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=1.2e-40 Score=339.00 Aligned_cols=306 Identities=18% Similarity=0.147 Sum_probs=228.4
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
|.+|++||++++|+...... ++. ....+...+||+++|+|++|+|||.
T Consensus 24 m~kv~~~GE~m~~l~p~~~~----------------------~~~---~~~~~~~~~GG~~aNvA~~larLG~------- 71 (351)
T 4gm6_A 24 MKQVVTIGELLMRLSTQQGI----------------------PFS---QTTALDIHIGGAEANVAVNLSKLGH------- 71 (351)
T ss_dssp -CEEEEECCCEEEEECCTTC----------------------CGG---GCSEEEEEEECHHHHHHHHHHHTTC-------
T ss_pred cCCEEEEcceeEEecCCCCC----------------------Ccc---ccCeEEEecCChHHHHHHHHHHcCC-------
Confidence 35799999999998764221 110 1247889999999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEE-CCCCCeEEEEecCCCC--CCCCChh-hhhhccC
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLT-TPDAQRAMLAYQGTSS--TINYDPC-LVNLISK 277 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~-~~~G~rt~~~~~ga~~--~l~~~~~-~~~~l~~ 277 (479)
++.|+|.||+|.+|+++++.|++.||+++++...+.+++.+++.. +..+++.++.+..... .+...+. ..+.+++
T Consensus 72 -~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~ 150 (351)
T 4gm6_A 72 -PTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKG 150 (351)
T ss_dssp -CEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTT
T ss_pred -CeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhh
Confidence 899999999999999999999999999999987666555555444 3445555554443221 2223332 3456889
Q ss_pred CcEEEEeccccCCc-chHHHHHHHHHHHHhcCCEEEEeCCCh--hhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 278 TNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASDV--TCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 278 ad~v~i~g~~~~~~-~~~~~~~~~l~~ak~~g~~v~~D~~~~--~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
++++|++|+.+... ...+.+.++++.++++|++|+||++.. .|......+.++.+++++|++++|++|++.+++...
T Consensus 151 ~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 230 (351)
T 4gm6_A 151 IRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISS 230 (351)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCT
T ss_pred cccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCC
Confidence 99999999865433 236788999999999999999998621 111112245566788999999999999999998653
Q ss_pred CC-cHHHH-HHHHh-----cCCCEEEEeec--CCCeEEEECCeEEEeCCCCC-CCCCccchhHHHHHHHHHHHHcCCChH
Q 011689 355 KE-SPEST-TRYLS-----HFVPLVSVTDG--ARGSYIGVKGEAVYIPPSPC-VPVDTCGAGDAYASGILYGILRGVSDL 424 (479)
Q Consensus 355 ~~-~~~~a-~~~l~-----~g~~~VVVT~G--~~Ga~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~l 424 (479)
.. +...+ .+... .+.+.++|+.+ ..++.++.+++.++.+++++ +++|||||||+|+|||+++|++|++ +
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-~ 309 (351)
T 4gm6_A 231 ETTDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-P 309 (351)
T ss_dssp TCSCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-H
T ss_pred chhHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-H
Confidence 22 22222 22211 12233445544 44667788888888888775 7999999999999999999999998 9
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHccc
Q 011689 425 KGMGALAARIAATVVGQQGTRLSVRHASELAESFAYRI 462 (479)
Q Consensus 425 ~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~~~ 462 (479)
++|+++|+++||++|++.|+.+.+| .+|+++++.+.-
T Consensus 310 ~~al~~A~aaaal~v~~~Ga~~~~~-~~ev~~~l~~~~ 346 (351)
T 4gm6_A 310 DETVKFATAAAGLKHSIHGDINPFD-EKTIADFAADKS 346 (351)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCCCC-HHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhCCC
Confidence 9999999999999999999998876 579999998653
No 37
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=6.7e-41 Score=338.68 Aligned_cols=291 Identities=19% Similarity=0.174 Sum_probs=235.6
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
|.++|+|++++|+++.++. + ..|... .+..+...+||+++|+|++|++||.
T Consensus 21 Mi~~v~G~~~~D~~~~~~~-----~--~~g~~~--------------~~~~~~~~~GG~~~NvA~~la~LG~-------- 71 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTA-----L--KLDDVN--------------RVQEVSKTAGGKGLNVTRVLAQVGE-------- 71 (330)
T ss_dssp CEEEEESSCEEEEEEEESC-----C--CTTSEE--------------EESCCEEEEECHHHHHHHHHHHHTC--------
T ss_pred EEEEEecchhheEEEecCC-----c--cCCceE--------------EeceEEEcCCchHHHHHHHHHHhCC--------
Confidence 4577889999999998764 1 233221 2236788999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh------hhhcc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL------VNLIS 276 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~------~~~l~ 276 (479)
++.++|.||+ ++|+++++.|++.||+++++...+ .|++++++++++ +++++..+++ .++.+++. .+.++
T Consensus 72 ~~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~ 146 (330)
T 2jg1_A 72 PVLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEG-QQTEILEQGP--EIDNQEAAGFIKHFEQMME 146 (330)
T ss_dssp CEEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHGG
T ss_pred CeEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHHHHHHHHHHhcC
Confidence 8999999996 699999999999999999887654 488888888765 7777666665 35444322 13367
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc---cCcEEEcCHHHHHHhhCCC
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN---YADIVFANSDEARAFCHFS 353 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~---~~Dvl~~N~~Ea~~L~g~~ 353 (479)
+++++|++|+.+.. ...+.+.++++.++++|.++++|+++. .+..+++ ++|++++|++|++.|++..
T Consensus 147 ~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~---------~l~~~l~~~~~~dil~~N~~E~~~l~g~~ 216 (330)
T 2jg1_A 147 KVEAVAISGSLPKG-LNQDYYAQIIERCQNKGVPVILDCSGA---------TLQTVLENPYKPTVIKPNISELYQLLNQP 216 (330)
T ss_dssp GCSEEEEESCCCBT-SCTTHHHHHHHHHHTTTCCEEEECCHH---------HHHHHHTSSSCCSEECCBHHHHHHHTTSC
T ss_pred CCCEEEEECCCCCC-CCHHHHHHHHHHHHHCCCEEEEECCcH---------HHHHHHhccCCceEEEeCHHHHHHHhCCC
Confidence 89999999876531 124678889999999999999999632 1233444 8999999999999999864
Q ss_pred CC---CcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHH
Q 011689 354 SK---ESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGA 429 (479)
Q Consensus 354 ~~---~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~ 429 (479)
.. ++.+. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|++
T Consensus 217 ~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-l~~al~ 295 (330)
T 2jg1_A 217 LDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-DHDLLK 295 (330)
T ss_dssp CCCCHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-HHHHHH
Confidence 22 23333 34455678999999999999999998888999999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 430 LAARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 430 ~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+|+++|+++|++.|+. .|+.+++++++++
T Consensus 296 ~A~a~aa~~v~~~G~~--~~~~~ev~~~~~~ 324 (330)
T 2jg1_A 296 KANTLGMLNAQEAQTG--YVNLNNYDDLFNQ 324 (330)
T ss_dssp HHHHHHHHHHTSSSSS--CCCGGGHHHHHTT
T ss_pred HHHHHHHHHhcCcCCC--CCCHHHHHHHHhc
Confidence 9999999999999985 6899999988764
No 38
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=2.8e-40 Score=330.38 Aligned_cols=290 Identities=19% Similarity=0.218 Sum_probs=236.0
Q ss_pred EEEE-cCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 125 VLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 125 Ilvi-G~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
|+++ +++.+|+++.++. + ++|.. +....+...+||+++|+|++|++||. +
T Consensus 4 i~~v~~n~~~D~~~~v~~-----~--~~g~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~--------~ 54 (309)
T 3umo_A 4 IYTLTLAPSLDSATITPQ-----I--YPEGK--------------LRCTAPVFEPGGGGINVARAIAHLGG--------S 54 (309)
T ss_dssp EEEECSSCEEEEEEEESC-----C--CSSSE--------------EECCCCEEEEESHHHHHHHHHHHTTC--------C
T ss_pred EEEEecchhheEEEEcCc-----c--cCCCe--------------EEeceeeecCCchHHHHHHHHHHcCC--------C
Confidence 6666 6899999999875 2 23321 23357889999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEEC-CCCCeEEEEecCCCCCCCCChhh--hh---hccC
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTT-PDAQRAMLAYQGTSSTINYDPCL--VN---LISK 277 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~-~~G~rt~~~~~ga~~~l~~~~~~--~~---~l~~ 277 (479)
+.++|.||+| +|+++++.|++.||+++++...+ +|+.++.+++ ++|+|+++.+++++ ++++++. .+ .+..
T Consensus 55 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~ 130 (309)
T 3umo_A 55 ATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIES 130 (309)
T ss_dssp EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCCC--CCHHHHHHHHHHHTTSCT
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCCC--CCHHHHHHHHHHHHhcCC
Confidence 9999999999 99999999999999999887654 4555555444 47999988888863 5544431 11 1357
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhccc--CcEEEcCHHHHHHhhCCCC-
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNY--ADIVFANSDEARAFCHFSS- 354 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~--~Dvl~~N~~Ea~~L~g~~~- 354 (479)
++++|++|+.... ...+.+.++++.++++++++++|++.. .+..+++. +|++++|++|++.|+|...
T Consensus 131 ~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~v~~D~~~~---------~l~~~l~~~~~dil~~N~~E~~~l~g~~~~ 200 (309)
T 3umo_A 131 GAILVISGSLPPG-VKLEKLTQLISAAQKQGIRCIVDSSGE---------ALSAALAIGNIELVKPNQKELSALVNRELT 200 (309)
T ss_dssp TCEEEEESCCCTT-CCHHHHHHHHHHHHHTTCEEEEECCHH---------HHHHHTSSCCBSEECCBHHHHHHHHTSCCC
T ss_pred CCEEEEEccCCCC-CCHHHHHHHHHHHHhcCCEEEEECCcH---------HHHHHhccCCCeEEEeCHHHHHHHhCCCCC
Confidence 8899999975422 236888999999999999999998632 12345566 5999999999999998652
Q ss_pred -CCcHHH-HHHHHhcCC-CEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHH
Q 011689 355 -KESPES-TTRYLSHFV-PLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALA 431 (479)
Q Consensus 355 -~~~~~~-a~~~l~~g~-~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A 431 (479)
.++.+. +.++++.+. +.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|
T Consensus 201 ~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-~~~a~~~A 279 (309)
T 3umo_A 201 QPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-LEEMVRFG 279 (309)
T ss_dssp STTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-HHHHHHHH
Confidence 234444 455667776 89999999999999998889999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 432 ARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 432 ~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+++|+.+|++.|+. .|+.+|+++++++
T Consensus 280 ~~~aa~~v~~~G~~--~~~~~ev~~~l~~ 306 (309)
T 3umo_A 280 VAAGSAATLNQGTR--LCSHDDTQKIYAY 306 (309)
T ss_dssp HHHHHHHTTSSTTC--CCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCC--CCCHHHHHHHHHH
Confidence 99999999999986 7899999999875
No 39
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=2.2e-40 Score=331.25 Aligned_cols=291 Identities=19% Similarity=0.223 Sum_probs=231.3
Q ss_pred cEEEE-cCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 124 DVLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 124 ~Ilvi-G~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
+|+++ |++++|+++.++. +.+|... ....+...+||++.|+|++|++||.
T Consensus 3 ~I~~v~g~~~~D~~~~~~~-------~~~g~~~--------------~~~~~~~~~GG~~~NvA~~la~LG~-------- 53 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQ-------IYPEGKL--------------RCTAPVFEPGGGGINVARAIAHLGG-------- 53 (309)
T ss_dssp CEEEECSSCEEEEEEEESC-------CCSSSEE--------------ECCCCEEEEESHHHHHHHHHHHTTC--------
T ss_pred eEEEEeccchheEEEEcCC-------CcCCCee--------------eccceeecCCchHHHHHHHHHHcCC--------
Confidence 37755 6999999998764 1233211 2246788999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEE-ECCCCCeEEEEecCCCCCCCCChhh------hhhc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVL-TTPDAQRAMLAYQGTSSTINYDPCL------VNLI 275 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~-~~~~G~rt~~~~~ga~~~l~~~~~~------~~~l 275 (479)
++.++|.||+| +|+++++.|++.||+++++.+.+ .|++++++ ++++|+|+++..+++. ++++++. .+.+
T Consensus 54 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~ 129 (309)
T 3cqd_A 54 SATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIE 129 (309)
T ss_dssp CEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCCC--CCHHHHHHHHHHHHTSC
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCCC--CCHHHHHHHHHHHHHhh
Confidence 89999999998 99999999999999999887654 47777777 7888999877777653 5444322 2346
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccC-cEEEcCHHHHHHhhCCCC
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYA-DIVFANSDEARAFCHFSS 354 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~-Dvl~~N~~Ea~~L~g~~~ 354 (479)
++ +++|++|+.+.. ...+.+.++++.+++.+.++++|++... +.+.+.+.+ |++++|++|++.|++...
T Consensus 130 ~~-~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~dil~~N~~E~~~l~g~~~ 199 (309)
T 3cqd_A 130 SG-AILVISGSLPPG-VKLEKLTQLISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNREL 199 (309)
T ss_dssp TT-CEEEEESCCCTT-CCHHHHHHHHHHHHTTTCEEEEECCHHH--------HHHHTTTCCBSEECCBHHHHHHHHTSCC
T ss_pred cC-CEEEEECCCCCC-CCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHHhCCCEEEeeCHHHHHHHhCCCC
Confidence 77 999999876432 2367888999999999999999997421 122234788 999999999999998642
Q ss_pred --CCcHHH-HHHHHhcC-CCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 355 --KESPES-TTRYLSHF-VPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 355 --~~~~~~-a~~~l~~g-~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
.++++. +.++++.+ ++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++
T Consensus 200 ~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-~~~a~~~ 278 (309)
T 3cqd_A 200 TQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-LEEMVRF 278 (309)
T ss_dssp CSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-HHHHHHH
Confidence 233444 45566778 999999999999999888888899999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 431 AARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 431 A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+++|+.++++.|+. .|+.+++++++++
T Consensus 279 A~~~aa~~~~~~G~~--~~~~~~v~~~~~~ 306 (309)
T 3cqd_A 279 GVAAGSAATLNQGTR--LCSHDDTQKIYAY 306 (309)
T ss_dssp HHHHHHHHTC-------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCCC--CCCHHHHHHHHHH
Confidence 999999999999985 6899999998864
No 40
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=2.2e-40 Score=333.61 Aligned_cols=294 Identities=16% Similarity=0.183 Sum_probs=236.5
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
|.|+|+|++++|+++.++. + ..|... ....+...+||+++|+|++|++||.
T Consensus 3 m~i~v~g~~~~D~~~~v~~-~------~~g~~~--------------~~~~~~~~~GG~~~NvA~~la~LG~-------- 53 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDH-L------KLDTVN--------------RTSQVTKTPGGKGLNVTRVIHDLGG-------- 53 (323)
T ss_dssp CEEEEESSCEEEEEEECSC-C------CTTSEE--------------EESCEEEEEESHHHHHHHHHHHHTC--------
T ss_pred eEEEEecCceeEEEEecCC-c------ccCCEE--------------EeceEEEcCCcHHHHHHHHHHHcCC--------
Confidence 5799999999999998864 1 223221 2236788999999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh------hhhcc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL------VNLIS 276 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~------~~~l~ 276 (479)
++.++|.||+ ++|+++++.|++.||+++++.+.+ .|++++++++++ +++++..+++ .++++++. ...+.
T Consensus 54 ~~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~ 128 (323)
T 2f02_A 54 DVIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLIK 128 (323)
T ss_dssp CEEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhcc
Confidence 8999999997 599999999999999999887654 588888888766 7777666665 35544332 12457
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCC-
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSK- 355 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~- 355 (479)
+++++|++|+.+... ..+.+.++++.+++.+.++++||++.. ..+.+..+ +++|++++|++|++.|+|....
T Consensus 129 ~~~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~Dp~~~~-----~~~~l~~~-~~~dil~~N~~E~~~l~g~~~~~ 201 (323)
T 2f02_A 129 QAEIVTISGSLAKGL-PSDFYQELVQKAHAQEVKVLLDTSGDS-----LRQVLQGP-WKPYLIKPNLEELEGLLGQDFSE 201 (323)
T ss_dssp TCSEEEEESCCCBTS-CTTHHHHHHHHHHHTTCEEEEECCTHH-----HHHHHHSS-CCCSEECCBHHHHHHHHTCCCCS
T ss_pred CCCEEEEECCCCCCC-ChHHHHHHHHHHHHCCCEEEEECChHH-----HHHHHhcc-CCCeEEecCHHHHHHHhCCCCCC
Confidence 899999998764321 246788899999999999999997531 11111111 5899999999999999986522
Q ss_pred ---CcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHH
Q 011689 356 ---ESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALA 431 (479)
Q Consensus 356 ---~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A 431 (479)
++.+. +.++++.|++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|
T Consensus 202 ~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-~~~a~~~A 280 (323)
T 2f02_A 202 NPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-AAELLKWG 280 (323)
T ss_dssp SCHHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-HHHHHHHH
Confidence 23333 34455678999999999999999998888999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 432 ARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 432 ~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+++|+.+|++.|+. .|+.+++++++++
T Consensus 281 ~~~aa~~v~~~G~~--~~~~~ev~~~~~~ 307 (323)
T 2f02_A 281 MAAGMANAQERMTG--HVDVENVKKHLMN 307 (323)
T ss_dssp HHHHHHHHHSSSSS--CCCHHHHHHHHTT
T ss_pred HHHHHHHHcCCCcC--CCCHHHHHHHhhc
Confidence 99999999999985 6899999988764
No 41
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4.4e-40 Score=335.07 Aligned_cols=305 Identities=18% Similarity=0.207 Sum_probs=240.3
Q ss_pred CCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~ 200 (479)
..|+|+++|+.+.++....+. . + .....+...+||+++|+|++|++||.
T Consensus 11 ~~~~~~~~ge~l~~~~~~~~~-------------~---------~---~~~~~~~~~~GG~~~NvA~~la~LG~------ 59 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPPDHK-------------R---------I---FQTDSFDVTYGGAEANVAAFLAQMGL------ 59 (351)
T ss_dssp CCCEEEEESCCEEEEECSTTC-------------C---------G---GGCSEEEEEEECHHHHHHHHHHHTTS------
T ss_pred ccceEEEechhhheecCCCCc-------------c---------c---cccceeeEecCChHHHHHHHHHHcCC------
Confidence 357899999999987643110 0 0 01236788999999999999999999
Q ss_pred CccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCC---CCCCCCChhhh-hhcc
Q 011689 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGT---SSTINYDPCLV-NLIS 276 (479)
Q Consensus 201 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga---~~~l~~~~~~~-~~l~ 276 (479)
++.++|.||+|.+|+++++.|++.||+++++...+.+|+.+++.++.+++++++.+.+. ...++++++.. ..++
T Consensus 60 --~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~ 137 (351)
T 2afb_A 60 --DAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILD 137 (351)
T ss_dssp --EEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTT
T ss_pred --CeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhc
Confidence 89999999999999999999999999999887666689998887664333455555432 23455554433 3468
Q ss_pred CCcEEEEeccccCCc-chHHHHHHHHHHHHhcCCEEEEeCCChh--hhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC
Q 011689 277 KTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASDVT--CIERHYDDFWEIVGNYADIVFANSDEARAFCHFS 353 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~-~~~~~~~~~l~~ak~~g~~v~~D~~~~~--~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~ 353 (479)
++++||++++.+..+ ...+.+.++++.+++.+.++++|++... +......+.+..+++++|++++|++|++.|+|..
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 217 (351)
T 2afb_A 138 GARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGIS 217 (351)
T ss_dssp TEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCC
T ss_pred CCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCC
Confidence 899999998865432 2357888999999999999999997321 1111123455678899999999999999999865
Q ss_pred CC-----------CcHHH-HHHHHhc-CCCEEEEeecCCCe--------EEEECCeEEEeCCCCCCCCCccchhHHHHHH
Q 011689 354 SK-----------ESPES-TTRYLSH-FVPLVSVTDGARGS--------YIGVKGEAVYIPPSPCVPVDTCGAGDAYASG 412 (479)
Q Consensus 354 ~~-----------~~~~~-a~~~l~~-g~~~VVVT~G~~Ga--------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Ag 412 (479)
.. ++++. +.+++.. +++.||||+|++|+ +++.+++.+++|+++++++|||||||+|+||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag 297 (351)
T 2afb_A 218 VEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGA 297 (351)
T ss_dssp CSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHH
T ss_pred cccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHH
Confidence 32 11333 3445554 99999999999975 7777888889999999999999999999999
Q ss_pred HHHHHHcCCChHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 413 ILYGILRGVSDLKGMGALAARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 413 fl~~l~~g~~~l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+++|++|++ +++|+++|+++|+.++++.|+.. +|+.+++++++++
T Consensus 298 ~~~~l~~g~~-l~~a~~~A~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 298 LIYGSLMGFD-SQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHHHHHHTCC-HHHHHHHHHHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHHHHHcCCC-HHHHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 9999999998 99999999999999999999875 8999999999864
No 42
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.9e-40 Score=329.53 Aligned_cols=278 Identities=19% Similarity=0.202 Sum_probs=223.1
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
++|+|+|++++|++.. ...+||+++|+|++|++||.
T Consensus 4 ~~v~viG~~~~D~~p~------------------------------------~~~~GG~~~N~A~~la~LG~-------- 39 (296)
T 2qhp_A 4 NIIVGMGEALWDVLPE------------------------------------GKKIGGAPANFAYHVSQFGF-------- 39 (296)
T ss_dssp CEEEEESCCEEEEETT------------------------------------EEEEECHHHHHHHHHHHTTC--------
T ss_pred ceEEEEchhheEecCC------------------------------------CCCCCCHHHHHHHHHHHcCC--------
Confidence 4799999999999721 14699999999999999999
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEECCCCCeEEEEecCC-CCCCCCChhhhhhccCCcE
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGT-SSTINYDPCLVNLISKTNI 280 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~~~G~rt~~~~~ga-~~~l~~~~~~~~~l~~ad~ 280 (479)
++.++|.||+|.+|+.+++.|++.|| +++.+. +.+|+.+++.++++|+|++..+.+. ...+.+.+...+.++++++
T Consensus 40 ~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 117 (296)
T 2qhp_A 40 DSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTRA 117 (296)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCHHHHHHHHTEEE
T ss_pred CeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcchhhHhhhcCCCE
Confidence 89999999999999999999999999 566543 5689999988887898887777665 3456555555567789999
Q ss_pred EEEeccccCCcchHHHHHHHHHHHHh-cCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCC--CCCc
Q 011689 281 FIVEGYLFELPDTIRTITKACEVAHR-SGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFS--SKES 357 (479)
Q Consensus 281 v~i~g~~~~~~~~~~~~~~~l~~ak~-~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~--~~~~ 357 (479)
+|++++....+...+.+.++++.+++ .+.++++|++.... .+..+.++.+++++|++++|++|++.|++.. ..++
T Consensus 118 v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~ 195 (296)
T 2qhp_A 118 VCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQD--FYTKEVLRESFKRCNILKINDEELVTISRMFGYPGID 195 (296)
T ss_dssp EEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTT--CCCHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSC
T ss_pred EEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCcc--ccCHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCC
Confidence 99977543333346778888888877 68999999863210 0113445667789999999999999998743 2234
Q ss_pred HHHH-HHHHhc-CCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 011689 358 PEST-TRYLSH-FVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIA 435 (479)
Q Consensus 358 ~~~a-~~~l~~-g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~A 435 (479)
++++ .+++++ +++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|
T Consensus 196 ~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-~~~a~~~a~~~a 274 (296)
T 2qhp_A 196 LQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-VPEAHKLAVEVS 274 (296)
T ss_dssp HHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-HHHHHHHHHHHH
Confidence 5554 455564 8999999999999999998889999999999999999999999999999999998 999999999999
Q ss_pred HHHhcccCCCCCCC
Q 011689 436 ATVVGQQGTRLSVR 449 (479)
Q Consensus 436 a~~v~~~G~~~~~p 449 (479)
+.++++.|+...+|
T Consensus 275 a~~v~~~G~~~~~~ 288 (296)
T 2qhp_A 275 AYVCTQSGAMPELP 288 (296)
T ss_dssp HHHHTSSSSSCCCC
T ss_pred HHHHcCCCCCCCCc
Confidence 99999999987655
No 43
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=9.6e-41 Score=337.55 Aligned_cols=295 Identities=15% Similarity=0.194 Sum_probs=237.0
Q ss_pred CccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCC
Q 011689 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (479)
Q Consensus 122 ~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~ 201 (479)
.|.|+|+|++++|+++.++. +.+|....+. ....+...+||+++|+|++|++||.
T Consensus 12 ~~~~~v~G~~~vD~~~~~~~-------~~~g~~~~~s-----------~~~~~~~~~GG~~~NvA~~la~LG~------- 66 (331)
T 2ajr_A 12 HMVLTVTLNPALDREIFIED-------FQVNRLYRIN-----------DLSKTQMSPGGKGINVSIALSKLGV------- 66 (331)
T ss_dssp CCEEEEESSCEEEEEEECTT-------CCSSCEEECC-----------SGGGEEEEEESHHHHHHHHHHHTTC-------
T ss_pred ceEEEEecchHHeEEEEcCC-------ccCCceEEec-----------cccceEEecCcHHHHHHHHHHHcCC-------
Confidence 46799999999999999874 1233222110 0136788999999999999999999
Q ss_pred ccEEEEEEeCCCchHHHHHHHHHhcC--CCceeeeeCCCCceEEEEEECCCCCe-EEEEecCCCCCCCCChhh------h
Q 011689 202 LNVAMTGSVGSDPLGGFYRAKLRRAN--VAFCSEPIKDGTTGTVIVLTTPDAQR-AMLAYQGTSSTINYDPCL------V 272 (479)
Q Consensus 202 ~~v~~ig~VG~D~~G~~i~~~L~~~G--Vd~~~v~~~~~~T~~~~v~~~~~G~r-t~~~~~ga~~~l~~~~~~------~ 272 (479)
++.++|.||+| +|+++++.|++.| |+++++.+.+ .|++++++++++|+| +++..+++ .++++++. .
T Consensus 67 -~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~ 141 (331)
T 2ajr_A 67 -PSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYK 141 (331)
T ss_dssp -CEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHH
T ss_pred -CeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHH
Confidence 89999999998 9999999999999 9999887654 588888888878998 76666665 35544332 2
Q ss_pred hhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc---cCcEEEcCHHH-HHH
Q 011689 273 NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN---YADIVFANSDE-ARA 348 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~---~~Dvl~~N~~E-a~~ 348 (479)
+.+.+++++|++|+.+... ..+.+.++++.+++.|.++++|+++.. +..+++ ++|++++|++| ++.
T Consensus 142 ~~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~~l~~~~~~dil~~N~~E~~~~ 211 (331)
T 2ajr_A 142 MTLSKVDCVVISGSIPPGV-NEGICNELVRLARERGVFVFVEQTPRL---------LERIYEGPEFPNVVKPDLRGNHAS 211 (331)
T ss_dssp HHHTTCSEEEEESCCCTTS-CTTHHHHHHHHHHHTTCEEEEECCHHH---------HHHHHHSSCCCSEECCCCTTCCSC
T ss_pred HhcccCCEEEEECCCCCCC-CHHHHHHHHHHHHHcCCEEEEECChHH---------HHHHHhcCCCCeEEEeCccchHHH
Confidence 3467899999998754311 246788899999999999999997421 122333 49999999999 999
Q ss_pred hhCCCCCC--cHH-HHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeC-CCCCCCCCccchhHHHHHHHHHHHH-cCCCh
Q 011689 349 FCHFSSKE--SPE-STTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIP-PSPCVPVDTCGAGDAYASGILYGIL-RGVSD 423 (479)
Q Consensus 349 L~g~~~~~--~~~-~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vp-a~~v~vvDttGAGDaF~Agfl~~l~-~g~~~ 423 (479)
|+|....+ +.+ .+.++++. ++.||||+|++|++++++++.+++| +++++++|||||||+|+|||+++|+ +|++
T Consensus 212 l~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~- 289 (331)
T 2ajr_A 212 FLGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN- 289 (331)
T ss_dssp BTTBCCCSHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-
T ss_pred HhCCCCCCHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-
Confidence 98864321 232 34556667 8999999999999999888888899 9999999999999999999999999 9998
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 424 LKGMGALAARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 424 l~eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+++|+++|+++|+.+|++.|+. .|+.+++++++++
T Consensus 290 ~~~al~~A~a~aa~~v~~~G~~--~~~~~ev~~~~~~ 324 (331)
T 2ajr_A 290 FLEMAKFGFASALAATRRKEKY--MPDLEAIKKEYDH 324 (331)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCC--CCCHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHHcCcCcC--CCCHHHHHHHHhh
Confidence 9999999999999999999984 7899999888764
No 44
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=6.6e-40 Score=328.74 Aligned_cols=280 Identities=21% Similarity=0.280 Sum_probs=223.4
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+++++|+|+|++++|++..++. +|. .+ +. .........+||+++|+|++|++||.
T Consensus 15 ~~~~~i~viG~~~iD~~~~~~~-----~p~-~~-----------~~---~~~~~~~~~~GG~~~NvA~~la~LG~----- 69 (312)
T 2hlz_A 15 PRGSQILCVGLVVLDVISLVDK-----YPK-ED-----------SE---IRCLSQRWQRGGNASNSCTILSLLGA----- 69 (312)
T ss_dssp --CCEEEEESCCEEEEEEEESS-----CCC-TT-----------CE---EECSEEEEEEESHHHHHHHHHHHHTC-----
T ss_pred CCCCcEEEECcceEEEeecccc-----CCC-cc-----------ce---eecccceeccCccHHHHHHHHHHcCC-----
Confidence 3456899999999999998764 221 11 11 11235678899999999999999999
Q ss_pred CCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC-CCCceEEEEEEC-CCCCeEEEEecCCCCCCCCChhhhhhccC
Q 011689 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTT-PDAQRAMLAYQGTSSTINYDPCLVNLISK 277 (479)
Q Consensus 200 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~~~-~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ 277 (479)
++.++|.||+|.+|+++++.|++.||+++++.+. +.+|++++++++ .+|+|+++.++++...++++++....+++
T Consensus 70 ---~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~~ 146 (312)
T 2hlz_A 70 ---PCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQ 146 (312)
T ss_dssp ---CEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTSCGGG
T ss_pred ---ceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHhhhcc
Confidence 8999999999999999999999999999988765 467888887775 47999999888877777776665556788
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhc--------CCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRS--------GALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~--------g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
+++||++++. .+.+.++++.+++. +.++++|+... . +.++.+++++|++++|++|++.+
T Consensus 147 ~~~v~~~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~--~-----~~~~~~l~~~dil~~n~~ea~~l 213 (312)
T 2hlz_A 147 FKWIHIEGRN------ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP--R-----EELFQLFGYGDVVFVSKDVAKHL 213 (312)
T ss_dssp EEEEEEECSS------HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC--C-----GGGGGGGGSSSEEEECHHHHHHT
T ss_pred CCEEEEeccC------HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc--h-----HHHHHHHhcCCEEEEcHHHHHHc
Confidence 9999999863 34556677777665 68999998642 1 12345778999999999999987
Q ss_pred hCCCCCCcHHHHHH-HHhcCC--CEEEEeecCCCeEEEEC-CeEEEeCCCC-CCCCCccchhHHHHHHHHHHHHcCCChH
Q 011689 350 CHFSSKESPESTTR-YLSHFV--PLVSVTDGARGSYIGVK-GEAVYIPPSP-CVPVDTCGAGDAYASGILYGILRGVSDL 424 (479)
Q Consensus 350 ~g~~~~~~~~~a~~-~l~~g~--~~VVVT~G~~Ga~~~~~-~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~l 424 (479)
+. ++.+.+.+ +...+. +.||||+|++|+++++. ++.+++|+++ ++++|||||||+|+|||+++|++|++ +
T Consensus 214 -g~---~~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-~ 288 (312)
T 2hlz_A 214 -GF---QSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-V 288 (312)
T ss_dssp -TC---CSHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-H
T ss_pred -CC---CCHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-H
Confidence 53 34555444 434333 89999999999999874 5578899964 68999999999999999999999998 9
Q ss_pred HHHHHHHHHHHHHHhcccCCC
Q 011689 425 KGMGALAARIAATVVGQQGTR 445 (479)
Q Consensus 425 ~eAl~~A~a~Aa~~v~~~G~~ 445 (479)
++|+++|+++|+.+|++.|+.
T Consensus 289 ~~a~~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 289 QEALRFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp HHHHHHHHHHHHHHHTSSSSG
T ss_pred HHHHHHHHHHHHHHHhhcCcc
Confidence 999999999999999999964
No 45
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=4.8e-41 Score=336.42 Aligned_cols=282 Identities=16% Similarity=0.183 Sum_probs=229.5
Q ss_pred CCCccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCC
Q 011689 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (479)
Q Consensus 120 ~~~~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~ 199 (479)
+++++|+|+|++++|++..++. +| +|.. .....+...+||+++|+|++|++||.
T Consensus 18 ~~~~~v~viG~~~iD~~~~~~~-----~p--~g~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~----- 71 (306)
T 3bf5_A 18 QGMRFLAYFGHLNIDVLISVDS-----IP--REGS--------------VNVKDLRPRFGGTAGNFAIVAQKFRI----- 71 (306)
T ss_dssp -CCEEEEEECCCEEEEEEECSC-----CC--SSEE--------------EECSEEEEEEEHHHHHHHHHHHHTTC-----
T ss_pred cCCCcEEEECCceEEEEEecCC-----CC--CCce--------------EECcceEecCCChHHHHHHHHHHcCC-----
Confidence 3456899999999999998764 22 2211 11235778999999999999999999
Q ss_pred CCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCC
Q 011689 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKT 278 (479)
Q Consensus 200 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~-~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~a 278 (479)
++.++|.||+| +|+++++.|++.||+++++.. ++.+|+.+++++++ |+|+++.+++++..++ +++. .++
T Consensus 72 ---~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~----~~~ 141 (306)
T 3bf5_A 72 ---PFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA----DEY 141 (306)
T ss_dssp ---CCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC----SCE
T ss_pred ---CeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc----CCC
Confidence 89999999999 999999999999999998754 55689999999987 9999998888765555 3332 689
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcH
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESP 358 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~ 358 (479)
++||++++. .+.++++.+++ ++++|++...+ ....+.+..+++++|++++|++|++.|++....+..
T Consensus 142 ~~v~~~~~~--------~~~~~~~~a~~---~v~~D~~~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~ 208 (306)
T 3bf5_A 142 EYVHFSTGP--------NYLDMAKSIRS---KIIFDPSQEIH--KYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP 208 (306)
T ss_dssp EEEEECSSS--------SHHHHHHHCCS---EEEECCGGGGG--GSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC
T ss_pred CEEEECChH--------HHHHHHHHhCC---cEEEcCchhhh--hccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc
Confidence 999998753 34566666654 89999873211 111344566778999999999999999875322211
Q ss_pred HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 011689 359 ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIAATV 438 (479)
Q Consensus 359 ~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~ 438 (479)
+ . .||||+|++|++++++++.+++|+++++ +|||||||+|+|||+++|++|++ +++|+++|+++|+.+
T Consensus 209 ----~-----l-~vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-~~~a~~~A~~~aa~~ 276 (306)
T 3bf5_A 209 ----K-----V-TTIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-IEKGMIYGTIIAHHV 276 (306)
T ss_dssp ----S-----S-CEEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHH
T ss_pred ----c-----E-EEEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHH
Confidence 1 1 1999999999999998888999999999 99999999999999999999998 999999999999999
Q ss_pred hcc--cCCCCCCCCHHHHHHHHHccc
Q 011689 439 VGQ--QGTRLSVRHASELAESFAYRI 462 (479)
Q Consensus 439 v~~--~G~~~~~p~~~el~~~l~~~~ 462 (479)
+++ .|+...+|+.+++++++++.+
T Consensus 277 v~~~~~G~~~~~p~~~ev~~~~~~~~ 302 (306)
T 3bf5_A 277 IDDGIENFSLNMEDLERETENYRRMF 302 (306)
T ss_dssp HHHCSTTCCCCHHHHHHHHHHHHHHC
T ss_pred hccCCccccccCCCHHHHHHHHHhhc
Confidence 999 999888899999999998764
No 46
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=2.7e-40 Score=337.34 Aligned_cols=292 Identities=21% Similarity=0.198 Sum_probs=228.5
Q ss_pred CCccEEEEcCceeeeeec--cChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCC
Q 011689 121 ERWDVLGLGQAMVDFSGM--VDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (479)
Q Consensus 121 ~~~~IlviG~~~iD~i~~--v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~ 198 (479)
++++|+|+|++++|++.. ++. + .++.+.+. .....+...+||+ +|+|++|++||.
T Consensus 52 ~~~~ilvvG~~~~D~~~~g~v~r-----~----------~p~~p~~~---~~~~~~~~~~GG~-~NvA~~la~LG~---- 108 (352)
T 4e84_A 52 ARSRVLVVGDVMLDRYWFGNVDR-----I----------SPEAPVPV---VHVQRQEERLGGA-ANVARNAVTLGG---- 108 (352)
T ss_dssp TTCEEEEEECEEEEEEEEEEEEE-----E----------CSSSSSEE---EEEEEEEEEEEEH-HHHHHHHHHTTC----
T ss_pred CCCcEEEECccceEEEEeecccc-----c----------CCCCCcce---EEeeEEEEecChH-HHHHHHHHHcCC----
Confidence 456899999999999986 221 0 00111111 1223678899998 899999999999
Q ss_pred CCCccEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecC-CCCCCCCC--hhhhhhc
Q 011689 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQG-TSSTINYD--PCLVNLI 275 (479)
Q Consensus 199 ~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~g-a~~~l~~~--~~~~~~l 275 (479)
++.++|.||+|.+|+.+++.|++.||++..+...+.+|+.++++++.++++..+.+.+ .+...... +...+.+
T Consensus 109 ----~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 184 (352)
T 4e84_A 109 ----QAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARFDVLL 184 (352)
T ss_dssp ----EEEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHHHHHG
T ss_pred ----CEEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999655566679999999888655555554433 22111111 1234567
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC-
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS- 354 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~- 354 (479)
.++++||++||.... .+.+.++++.++++|+++++|+++.. + .+++++|++++|++|++.|+|...
T Consensus 185 ~~~~~v~~~g~~~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~-----~-----~~l~~~dil~pN~~Ea~~l~g~~~~ 251 (352)
T 4e84_A 185 PQHDVVLMSDYAKGG---LTHVTTMIEKARAAGKAVLVDPKGDD-----W-----ARYRGASLITPNRAELREVVGQWKS 251 (352)
T ss_dssp GGCSEEEEECCSSSS---CSSHHHHHHHHHHTTCEEEEECCSSC-----C-----STTTTCSEECCBHHHHHHHHCCCSS
T ss_pred ccCCEEEEeCCCCCC---HHHHHHHHHHHHhcCCEEEEECCCcc-----h-----hhccCCcEEcCCHHHHHHHhCCCCC
Confidence 899999999875322 23377888999999999999997521 1 256899999999999999998321
Q ss_pred CCcHHH-HHHHHh-cCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHH
Q 011689 355 KESPES-TTRYLS-HFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAA 432 (479)
Q Consensus 355 ~~~~~~-a~~~l~-~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~ 432 (479)
.++.+. +.+++. .+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+
T Consensus 252 ~~~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-l~~al~~A~ 330 (352)
T 4e84_A 252 EDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-LVDAVVLAN 330 (352)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-HHHHHHHHH
Confidence 122333 344554 59999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHH
Q 011689 433 RIAATVVGQQGTRLSVRHASELA 455 (479)
Q Consensus 433 a~Aa~~v~~~G~~~~~p~~~el~ 455 (479)
++|+++|++.|+.. ++.+||+
T Consensus 331 aaaa~~v~~~Ga~~--~t~~el~ 351 (352)
T 4e84_A 331 RAAGIVVGKLGTAT--VDYDELF 351 (352)
T ss_dssp HHHHHHHTSSSSCC--CCHHHHT
T ss_pred HHHHHHhcCCCCcc--CCHHHhc
Confidence 99999999999986 5888875
No 47
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=2.1e-39 Score=325.29 Aligned_cols=290 Identities=16% Similarity=0.119 Sum_probs=229.2
Q ss_pred ccEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCc
Q 011689 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (479)
Q Consensus 123 ~~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~ 202 (479)
++|+|+|++++|++.... ..+...+||++.|+|++|++||..
T Consensus 3 ~~ilviG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~LG~~------- 44 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETPF-------------------------------GRSDNTLGGSSTYIALSASYFTDE------- 44 (313)
T ss_dssp CCEEEESCCEEEEEECSS-------------------------------CEEEEEEECHHHHHHHHHTTTCSS-------
T ss_pred ccEEEEeEEEEeeecCCC-------------------------------CcccccCCCHHHHHHHHHHHhCCC-------
Confidence 479999999999997421 135678999999999999999981
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCC-CCceEEEE--EECCCCCeEEEEecCCCCCCCCChhhhhhccCCc
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKD-GTTGTVIV--LTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v--~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad 279 (479)
++.++|.||+| +|+.+++.|++.||+++++.+.+ .+|....- ..+.++++++....+....+.+. ..+.+++++
T Consensus 45 ~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 121 (313)
T 3kd6_A 45 PIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH--VPQYYRDSK 121 (313)
T ss_dssp CEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC--CCGGGTTCS
T ss_pred ceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc--chHHHccCC
Confidence 38999999999 99999999999999999987654 56633221 12334556666665555444432 345678999
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCcHH
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKESPE 359 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~~~ 359 (479)
++|+++. + .+...++++.+ +.+.++++|+.+. +. ....+.++.+++++|++++|++|++.|+|.. +.+
T Consensus 122 ~v~~~~~----~--~~~~~~~~~~~-~~~~~v~~Dp~~~-~~-~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~---~~~ 189 (313)
T 3kd6_A 122 FVCLGNI----D--PELQLKVLDQI-DDPKLVVCDTMNF-WI-EGKPEELKKVLARVDVFIVNDSEARLLSGDP---NLV 189 (313)
T ss_dssp EEEECSS----C--HHHHHHHHTTC-SSCSEEEEECCHH-HH-HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS---CHH
T ss_pred EEEEcCC----C--HHHHHHHHHHH-hhCCEEEEcChhh-hh-hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC---CHH
Confidence 9999653 2 34455666666 5788999998533 22 2223455667899999999999999999853 444
Q ss_pred H-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCC-CCCCccchhHHHHHHHHHHHHcCC-----ChHHHHHHHHH
Q 011689 360 S-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPC-VPVDTCGAGDAYASGILYGILRGV-----SDLKGMGALAA 432 (479)
Q Consensus 360 ~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~-----~~l~eAl~~A~ 432 (479)
. +.++++.+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+ + +++|+++|+
T Consensus 190 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~-l~~a~~~a~ 268 (313)
T 3kd6_A 190 KTARIIREMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAE-MRKAVLYGS 268 (313)
T ss_dssp HHHHHHHTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCccccC-HHHHHHHHH
Confidence 4 5556777999999999999999999999999999998 799999999999999999999998 6 999999999
Q ss_pred HHHHHHhcccCCCCC-CCCHHHHHHHHHccccccc
Q 011689 433 RIAATVVGQQGTRLS-VRHASELAESFAYRIKSST 466 (479)
Q Consensus 433 a~Aa~~v~~~G~~~~-~p~~~el~~~l~~~~~~~~ 466 (479)
++|+.+|++.|+... .|+.+++++++++..+.+.
T Consensus 269 ~~aa~~v~~~G~~~~~~~~~~ev~~~l~~~~~~~~ 303 (313)
T 3kd6_A 269 AMASFCVEQFGPYRYNDLDLLEVDDRYQSFLELSR 303 (313)
T ss_dssp HHHHHHTTSSTTGGGGTCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHeecCCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 999999999999863 5899999999987665544
No 48
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=5.1e-39 Score=321.04 Aligned_cols=286 Identities=16% Similarity=0.186 Sum_probs=232.8
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
+.+.|++++|+++.++. + .+|... ....+...+||++.|+|++|++||. ++
T Consensus 3 ~tv~~n~~~D~~~~~~~-----~--~~g~~~--------------~~~~~~~~~GG~~~N~A~~la~LG~--------~~ 53 (306)
T 2abq_A 3 YTVTLNPSIDYIVQVEN-----F--QQGVVN--------------RSERDRKQPGGKGINVSRVLKRLGH--------ET 53 (306)
T ss_dssp EEEESSCEEEEEEECTT-----C--CSSSEE--------------ECSEEEEEEECHHHHHHHHHHHTTC--------CC
T ss_pred EEEecCchheEEEEcCC-----c--ccCCeE--------------EeceeEecCCchHHHHHHHHHHcCC--------Cc
Confidence 66779999999999875 1 233222 2236788999999999999999999 89
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh--hh---ccCCc
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--NL---ISKTN 279 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~--~~---l~~ad 279 (479)
.++|.||+ .+|+++++.|++.||+++++...+ .|++++++ .+|+|+++..+++ .++++++.. +. +++++
T Consensus 54 ~~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 127 (306)
T 2abq_A 54 KALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGD 127 (306)
T ss_dssp EEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred eEEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCC
Confidence 99999998 799999999999999999887654 47877765 4788877655554 355443321 11 57899
Q ss_pred EEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc-cCcEEEcCHHHHHHhhCCCCC--C
Q 011689 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN-YADIVFANSDEARAFCHFSSK--E 356 (479)
Q Consensus 280 ~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~-~~Dvl~~N~~Ea~~L~g~~~~--~ 356 (479)
++|++|+.+.. ...+.+.++++.++++|.++++|+++. .+..+++ ++|++++|++|++.|++.... +
T Consensus 128 ~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~---------~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~ 197 (306)
T 2abq_A 128 VLVLAGSVPQA-MPQTIYRSMTQIAKERGAFVAVDTSGE---------ALHEVLAAKPSFIKPNHHELSELVSKPIASIE 197 (306)
T ss_dssp EEEEESCCCTT-SCTTHHHHHHHHHHTTTCEEEEECCHH---------HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHH
T ss_pred EEEEecCCCCC-CCHHHHHHHHHHHHhcCCEEEEECChH---------HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHH
Confidence 99999876431 124678889999999999999998632 2345678 999999999999999986432 1
Q ss_pred cHH-HHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 011689 357 SPE-STTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARIA 435 (479)
Q Consensus 357 ~~~-~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~A 435 (479)
+.. .+.++++.+++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|
T Consensus 198 ~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-~~~a~~~A~a~a 276 (306)
T 2abq_A 198 DAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-LEDAVPFAVAAG 276 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-HHHHHHHHHHHH
Confidence 233 344566779999999999999999988888999999999999999999999999999999998 999999999999
Q ss_pred HHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 436 ATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 436 a~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+.+|++. ++|+.+++++++++
T Consensus 277 a~~v~~~----~~p~~~ev~~~~~~ 297 (306)
T 2abq_A 277 SATAFSD----GFCTREEVERLQQQ 297 (306)
T ss_dssp HHHHHSS----SCCCHHHHHHHHHH
T ss_pred HHHhcCc----CCCCHHHHHHHHhh
Confidence 9999998 57899999998865
No 49
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-38 Score=316.83 Aligned_cols=287 Identities=17% Similarity=0.136 Sum_probs=231.2
Q ss_pred cEEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCcc
Q 011689 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~ 203 (479)
-+.+.|++++|+++.+++ + ..|... ....+...+||++.|+|++|++||. +
T Consensus 2 i~tvt~n~~~D~~~~~~~-~------~~g~~~--------------~~~~~~~~~GG~~~N~A~~la~LG~--------~ 52 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTND-F------KIDGLN--------------RATATYKFAGGKGINVSRVLKTLDV--------E 52 (306)
T ss_dssp EEEEESSCEEEEEEECSS-C------CTTSEE--------------ECSEEEEEEESHHHHHHHHHHHTTC--------C
T ss_pred EEEEecCceEEEEEEcCC-c------ccCceE--------------EeceeEecCCchHHHHHHHHHHcCC--------C
Confidence 367789999999999875 1 233221 2346788999999999999999999 8
Q ss_pred EEEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhh--h-h--ccCC
Q 011689 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--N-L--ISKT 278 (479)
Q Consensus 204 v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~--~-~--l~~a 278 (479)
+.++|.||+ ++|+++++.|++.||+++++.+.+ .|++++++ .+|+|+++...++. ++++++.. + . ++++
T Consensus 53 ~~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~ 126 (306)
T 2jg5_A 53 STALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--KTGQETEINAPGPH--ITSTQFEQLLQQIKNTTSE 126 (306)
T ss_dssp CEEEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--ESSSEEEEECCCCC--CCHHHHHHHHHHHTTCCTT
T ss_pred eeEEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--cCCCEEEEECCCCC--CCHHHHHHHHHHHHhccCC
Confidence 999999999 699999999999999999887654 47777765 47888877666653 54443321 1 1 5789
Q ss_pred cEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc-cCcEEEcCHHHHHHhhCCCCCC-
Q 011689 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN-YADIVFANSDEARAFCHFSSKE- 356 (479)
Q Consensus 279 d~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~-~~Dvl~~N~~Ea~~L~g~~~~~- 356 (479)
+++|++|+..... ..+.+.++++.+++++.++++|+++.. +..+++ .+|++++|++|++.|++....+
T Consensus 127 ~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~~l~~~~dil~~N~~E~~~l~g~~~~~~ 196 (306)
T 2jg5_A 127 DIVIVAGSVPSSI-PSDAYAQIAQITAQTGAKLVVDAEKEL---------AESVLPYHPLFIKPNKDELEVMFNTTVNSD 196 (306)
T ss_dssp CEEEEESCCCTTS-CTTHHHHHHHHHHHHCCEEEEECCHHH---------HHHHGGGCCSEECCBHHHHHHHTTSCCCSH
T ss_pred CEEEEeCCCCCCC-ChHHHHHHHHHHHHCCCEEEEECChHH---------HHHHHhcCCeEEecCHHHHHHHhCCCCCCH
Confidence 9999998754321 246778888999999999999986321 233455 6999999999999999864322
Q ss_pred -cHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 011689 357 -SPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 357 -~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
+++. +.++++.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 197 ~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-~~~a~~~A~a~ 275 (306)
T 2jg5_A 197 ADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-IEKAFQQAVAC 275 (306)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 2323 44566778999999999999999888888899999999999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 435 AATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 435 Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
|+.+|++.| +|+.+++++++++
T Consensus 276 aa~~v~~~G----~~~~~ev~~~~~~ 297 (306)
T 2jg5_A 276 GTATAFDED----LATRDAIEKIKSQ 297 (306)
T ss_dssp HHHHHTSSS----SCCHHHHHHHHTT
T ss_pred HHHHHcCCC----CCCHHHHHHHHhc
Confidence 999999999 6899999998864
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.2e-36 Score=303.16 Aligned_cols=270 Identities=13% Similarity=0.088 Sum_probs=213.3
Q ss_pred EEEEcCceeeeeeccChHHHHhhccCCCCccccccchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccE
Q 011689 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (479)
Q Consensus 125 IlviG~~~iD~i~~v~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v 204 (479)
|.++|.+..|.+.... .+...+||+++|+|++|++||. ++
T Consensus 14 ~~~~~~~~~~~~~~~~--------------------------------~~~~~~GG~~~NvA~~la~LG~--------~~ 53 (298)
T 1vk4_A 14 ITFIGHVSKDVNVVDG--------------------------------KREIAYGGGVVMGAITSSLLGV--------KT 53 (298)
T ss_dssp EEEECCCEEEEEEETT--------------------------------EEEEEEECHHHHHHHHHHHTTC--------EE
T ss_pred EEEeccccCceEeecC--------------------------------eEEEecCCHHHHHHHHHHHcCC--------ce
Confidence 8899999999887642 4567899999999999999999 89
Q ss_pred EEEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhhhhhccCCcEEEEe
Q 011689 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIVE 284 (479)
Q Consensus 205 ~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~~~~l~~ad~v~i~ 284 (479)
.++|.||+|. +.+++.|++.||++.++.. +.+|+.+.++ +++|+++++.+.+++..++++++.. ..++++|++
T Consensus 54 ~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~~g~~~~~~~~~~~~~l~~~~~~~---~~~~~v~~~ 126 (298)
T 1vk4_A 54 KVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GSDPDTRESFLISAADPFTESDLAF---IEGEAVHIN 126 (298)
T ss_dssp EEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC------CCEEEEEECCCCCCGGGGGG---CCSSEEEEC
T ss_pred EEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cCCCCeeEEEeccccccCCHHHcCc---CCCCEEEEC
Confidence 9999999997 7788999999999998764 4456666554 5568888777777776776665433 579999998
Q ss_pred ccccCCcchHHHHHHHHHHHHhcCCEEEEeCCCh-------hhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCCCCc
Q 011689 285 GYLFELPDTIRTITKACEVAHRSGALVAVTASDV-------TCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSSKES 357 (479)
Q Consensus 285 g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~-------~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~~~~ 357 (479)
++... +...++++.++++|.++++|+++. .++...+. .++.+++++|++++|++|++.|+|.. +
T Consensus 127 ~~~~~-----~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~-~~~~~l~~~dil~~N~~E~~~l~g~~---~ 197 (298)
T 1vk4_A 127 PLWYG-----EFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWE-MKEKYLKYLDLFKVDSREAETLTGTN---D 197 (298)
T ss_dssp CSSTT-----SSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCT-THHHHGGGCSEEEEEHHHHHHHHSCS---C
T ss_pred Ccccc-----cccHHHHHHHHHcCCEEEEecCccccccccccccccchH-HHHhhcccCCEEecCHHHHHHHhCCC---C
Confidence 76331 112356677778899999998631 01111121 24557789999999999999999853 3
Q ss_pred HHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc-CCChHHHHHHHHHHHH
Q 011689 358 PES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR-GVSDLKGMGALAARIA 435 (479)
Q Consensus 358 ~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~-g~~~l~eAl~~A~a~A 435 (479)
++. +.++++.|++.||||+ ++|++++++ +.+++|+++++++|||||||+|+|||+++|++ |++ +++|+++|+++|
T Consensus 198 ~~~~~~~l~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-~~~a~~~A~a~a 274 (298)
T 1vk4_A 198 LRESCRIIRSFGAKIILATH-ASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-IEKATKFAAAVT 274 (298)
T ss_dssp HHHHHHHHHHTTCSSEEEEE-TTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEc-CCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-HHHHHHHHHHHH
Confidence 444 4556678999999999 999999877 78889999999999999999999999999999 998 999999999999
Q ss_pred HHHhcccCCCCCCCCHHHH
Q 011689 436 ATVVGQQGTRLSVRHASEL 454 (479)
Q Consensus 436 a~~v~~~G~~~~~p~~~el 454 (479)
+.+|++.|+... |+.+|+
T Consensus 275 a~~v~~~G~~~~-~~~~el 292 (298)
T 1vk4_A 275 SVKMRHPGPLRR-EDLEAI 292 (298)
T ss_dssp HHHTTSSSSCCG-GGGGGC
T ss_pred HHHHccCCCCCC-CCHHHH
Confidence 999999998865 666554
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.88 E-value=7e-23 Score=204.88 Aligned_cols=216 Identities=16% Similarity=0.120 Sum_probs=151.7
Q ss_pred cEEEEEEeCCCchHHHHHHHHHhcCCCceeeeeC--CCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh--hhh----
Q 011689 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK--DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--VNL---- 274 (479)
Q Consensus 203 ~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~--~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~--~~~---- 274 (479)
.+.++|.||+|. |+++ |++.||++.++.+. ...|++.+ +.| ..++.+++. .+.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~-------------~~g--~~l~~~~i~~~~~~~~~~ 72 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH-------------WKG--QVLNSDELQELYEGLRLN 72 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC-------------CCE--EECCHHHHHHHHHHHHHT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC-------------ccC--ccCCHHHHHHHHHHHHhc
Confidence 467889999998 9988 99999999887542 22333222 111 123333332 111
Q ss_pred -ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCC--EEEEeCCChh--------hhhhhhHHHHH-HhcccCcEEEcC
Q 011689 275 -ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGA--LVAVTASDVT--------CIERHYDDFWE-IVGNYADIVFAN 342 (479)
Q Consensus 275 -l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~--~v~~D~~~~~--------~~~~~~~~~~~-~ll~~~Dvl~~N 342 (479)
+.+++++++ |+.. .+...+.+.++++.++++|. ++++||.... +......+.+. .+++++|++++|
T Consensus 73 ~~~~~~~v~~-G~~~-~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN 150 (312)
T 2yxt_A 73 NMNKYDYVLT-GYTR-DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPN 150 (312)
T ss_dssp TCCCCSEEEE-CCCC-CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCC
T ss_pred CCccCCEEEE-CCCC-CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCC
Confidence 567999876 6543 22235677788898888875 4889986321 11111223344 378999999999
Q ss_pred HHHHHHhhCCCCC--CcHHH-HHHHHhcCCCEEEEeecCC------CeEEE-------EC-C----eEEEeCCCCCCCCC
Q 011689 343 SDEARAFCHFSSK--ESPES-TTRYLSHFVPLVSVTDGAR------GSYIG-------VK-G----EAVYIPPSPCVPVD 401 (479)
Q Consensus 343 ~~Ea~~L~g~~~~--~~~~~-a~~~l~~g~~~VVVT~G~~------Ga~~~-------~~-~----~~~~vpa~~v~vvD 401 (479)
++|++.|+|.... ++.+. +.++++.|++.||||+|.. |++++ ++ + +.+++|++++++ |
T Consensus 151 ~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-d 229 (312)
T 2yxt_A 151 QFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-V 229 (312)
T ss_dssp HHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSS-C
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCC-C
Confidence 9999999986422 22333 4456677999999998876 47765 44 3 677888888887 9
Q ss_pred ccchhHHHHHHHHHHHHc-CCChHHHHHHHHHHHHHHHhcc
Q 011689 402 TCGAGDAYASGILYGILR-GVSDLKGMGALAARIAATVVGQ 441 (479)
Q Consensus 402 ttGAGDaF~Agfl~~l~~-g~~~l~eAl~~A~a~Aa~~v~~ 441 (479)
||||||+|+|||+++|++ |++ +++|+++|+++|+.++++
T Consensus 230 ttGAGDaf~a~~~~~l~~~g~~-l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 230 FVGTGDLFAAMLLAWTHKHPNN-LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp CSSHHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 998 999999999999888754
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.88 E-value=2.8e-22 Score=197.68 Aligned_cols=217 Identities=15% Similarity=0.165 Sum_probs=152.7
Q ss_pred EEEEeCCCchHHHHHHHHHhcCCCceeeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCChhh------hh--hccC
Q 011689 206 MTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL------VN--LISK 277 (479)
Q Consensus 206 ~ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~~~~~G~rt~~~~~ga~~~l~~~~~~------~~--~l~~ 277 (479)
.+|.+|.| ..++.|++.||++.++.. . ++.+..|.+. +.+ ..++.+++. .+ .+++
T Consensus 26 ~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~---~~g--~~~~~~~~~~~~~~l~~~~~~~~ 88 (283)
T 2ddm_A 26 VYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDT---FYG--GAIPDEWFSGYLRALQERDALRQ 88 (283)
T ss_dssp SSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSC---CCE--EECCHHHHHHHHHHHHHTTCCTT
T ss_pred CCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCc---eee--eeCCHHHHHHHHHHHHhcCCccc
Confidence 37788887 356789999999988743 1 2224445554 111 123322221 11 3567
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHh--cCCEEEEeCCChh-----hhh-hhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHR--SGALVAVTASDVT-----CIE-RHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~--~g~~v~~D~~~~~-----~~~-~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
+++|+++... .....+.+.++++.+++ .++++++||+... +.. .....+.+.+++++|++++|+.|++.|
T Consensus 89 ~~~v~~G~l~--~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L 166 (283)
T 2ddm_A 89 LRAVTTGYMG--TASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEIL 166 (283)
T ss_dssp CCEEEECCCS--CHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHH
T ss_pred CCEEEECCcC--CHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHH
Confidence 8999985322 22235778888888887 7899999986321 111 112233345788999999999999999
Q ss_pred hCCCCCC--cHHH-HHHHHhcCCCEEEEeecCC-------CeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc
Q 011689 350 CHFSSKE--SPES-TTRYLSHFVPLVSVTDGAR-------GSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR 419 (479)
Q Consensus 350 ~g~~~~~--~~~~-a~~~l~~g~~~VVVT~G~~-------Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 419 (479)
+|....+ +.+. +.++++.+++.||||.|.+ |++++++++.++++++++. +||+||||+|+|+|++++++
T Consensus 167 ~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~ 245 (283)
T 2ddm_A 167 TGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLK 245 (283)
T ss_dssp HTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHT
T ss_pred hCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHc
Confidence 9864221 2333 3445567899999999999 8888888888888888886 89999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhcccC
Q 011689 420 GVSDLKGMGALAARIAATVVGQQG 443 (479)
Q Consensus 420 g~~~l~eAl~~A~a~Aa~~v~~~G 443 (479)
|++ +++|+++|+++++.++++..
T Consensus 246 g~~-~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 246 GKA-LTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp TCC-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHH
Confidence 998 99999999999999998753
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.83 E-value=2.9e-20 Score=183.95 Aligned_cols=159 Identities=12% Similarity=0.057 Sum_probs=118.6
Q ss_pred CcEEEEeccccCCcchHHHHHHHHHHHHhcCCE-EEEeCCChh-----hhhh-hhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGAL-VAVTASDVT-----CIER-HYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 278 ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~-v~~D~~~~~-----~~~~-~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
++++++ |+. .+ .+.+..+++.+++.+.+ +++||.... +... ....+.+.+++++|+|++|+.|++.|+
T Consensus 95 ~~~v~~-G~l--~~--~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~ 169 (288)
T 1jxh_A 95 IDTTKI-GML--AE--TDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALL 169 (288)
T ss_dssp CSEEEE-CCC--CS--HHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHH
T ss_pred CCEEEE-CCC--CC--HHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHc
Confidence 688877 432 12 57788888999998986 999986431 1111 111222347789999999999999999
Q ss_pred CC-CCCC--cHHH-HHHHHhcCCCEEEEeecCCC-----eEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC
Q 011689 351 HF-SSKE--SPES-TTRYLSHFVPLVSVTDGARG-----SYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV 421 (479)
Q Consensus 351 g~-~~~~--~~~~-a~~~l~~g~~~VVVT~G~~G-----a~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 421 (479)
|. ...+ +.++ +.++++.+++.||||.|.+| ++++++++.+++++++++++||+||||+|+|+|+++|++|+
T Consensus 170 g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~g~ 249 (288)
T 1jxh_A 170 DAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRHR 249 (288)
T ss_dssp TCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGGSS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHcCC
Confidence 86 3221 2233 45566778999999999999 88888777888999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhccc
Q 011689 422 SDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 422 ~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
+ +++|+++|+++++.++++.
T Consensus 250 ~-~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 250 S-WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp S-HHHHHHHHHHHHHHHHTTG
T ss_pred C-HHHHHHHHHHHHHHHHHhh
Confidence 8 9999999999999999776
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.78 E-value=2.4e-18 Score=167.02 Aligned_cols=160 Identities=18% Similarity=0.157 Sum_probs=122.4
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcC-CEEEEeCCChh-----hhhh-hhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSG-ALVAVTASDVT-----CIER-HYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g-~~v~~D~~~~~-----~~~~-~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
+.+++++ |+. . + .+.+..+++.+++.+ .++++||.... +... ....+.+.+++++|++++|+.|++.|
T Consensus 70 ~~~~v~~-G~l-~-~--~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L 144 (258)
T 1ub0_A 70 PLHAAKT-GAL-G-D--AAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEAL 144 (258)
T ss_dssp CCSEEEE-CCC-C-S--HHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEE-CCc-C-C--HHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHH
Confidence 4677777 442 2 2 466778888888888 89999986321 1111 11223345778999999999999999
Q ss_pred hCCCCCC--cHHH-HHHHHhcCCCEEEEeecCC-C----eEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCC
Q 011689 350 CHFSSKE--SPES-TTRYLSHFVPLVSVTDGAR-G----SYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGV 421 (479)
Q Consensus 350 ~g~~~~~--~~~~-a~~~l~~g~~~VVVT~G~~-G----a~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 421 (479)
+|....+ +.+. +.++.+.+++.||||.|.+ | ++++++++.+++++++++++||+||||+|+|+|++++++|+
T Consensus 145 ~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~ 224 (258)
T 1ub0_A 145 LGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGR 224 (258)
T ss_dssp HCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred hCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHcCC
Confidence 9864321 2333 4456667889999999998 8 78888888888998889999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhccc
Q 011689 422 SDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 422 ~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
+ +++|+++|+++++.++++.
T Consensus 225 ~-~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 225 P-LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp C-HHHHHHHHHHHHHHHHHTC
T ss_pred C-HHHHHHHHHHHHHHHHHHh
Confidence 8 9999999999999988754
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.74 E-value=3.7e-17 Score=159.81 Aligned_cols=160 Identities=15% Similarity=0.139 Sum_probs=124.0
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCC-EEEEeCCChh-----hhhh-hhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGA-LVAVTASDVT-----CIER-HYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~-~v~~D~~~~~-----~~~~-~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
.+|++++ |+. . + .+.+..+++.+++.+. ++++||.... +... ....+.+.+++++|++++|..|++.|
T Consensus 74 ~~d~v~~-G~l-~-~--~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKT-GML-P-T--VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEE-CCC-C-S--HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEE-CCC-C-C--HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 6788888 442 1 2 5677888888888888 5999986321 1111 11223236778999999999999999
Q ss_pred hCCC-CCC--cHHH-HHHHHhcCCCEEEEeecC--CCe----EEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc
Q 011689 350 CHFS-SKE--SPES-TTRYLSHFVPLVSVTDGA--RGS----YIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR 419 (479)
Q Consensus 350 ~g~~-~~~--~~~~-a~~~l~~g~~~VVVT~G~--~Ga----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 419 (479)
+|.. ..+ +.+. +.++.+.+.+.||||.|. +|+ +++++++.+++++++++++||+||||+|+|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9864 222 2333 445667789999999999 885 67777778888988889999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhccc
Q 011689 420 GVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 420 g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
|++ +++|+++|+++++.++++.
T Consensus 229 g~~-~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-HHHHHHHHHHHHHHHHHHh
Confidence 998 9999999999999999875
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.73 E-value=1.9e-17 Score=163.90 Aligned_cols=164 Identities=14% Similarity=0.060 Sum_probs=123.2
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcC--CEEEEeCCChh------hhhhhhHHHHHHhcccCcEEEcCHHHHH
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTASDVT------CIERHYDDFWEIVGNYADIVFANSDEAR 347 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g--~~v~~D~~~~~------~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~ 347 (479)
.++|+| .+|+.. .+...+.+.++++.+++++ .++++||.-.. +.+.....+.+.+++++|+|+||..|++
T Consensus 76 ~~~d~v-~~G~l~-~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 153 (289)
T 3pzs_A 76 KDCDAV-LSGYIG-SPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELE 153 (289)
T ss_dssp GGCCEE-EECCCS-SHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHH
T ss_pred cCCCEE-EECCCC-CHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHH
Confidence 478885 557743 3334678888888888766 78999974211 1111122333347789999999999999
Q ss_pred HhhCCCCCC--cHHH-HHHHHhcCCCEEEEeec-CCCe-------EEEECCeEEEeCCCCCCC--CCccchhHHHHHHHH
Q 011689 348 AFCHFSSKE--SPES-TTRYLSHFVPLVSVTDG-ARGS-------YIGVKGEAVYIPPSPCVP--VDTCGAGDAYASGIL 414 (479)
Q Consensus 348 ~L~g~~~~~--~~~~-a~~~l~~g~~~VVVT~G-~~Ga-------~~~~~~~~~~vpa~~v~v--vDttGAGDaF~Agfl 414 (479)
.|+|....+ +... +.++.+.|++.|+||.| .+|+ +++++++.++++.+++++ +||+||||+|+|+|+
T Consensus 154 ~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~~~ 233 (289)
T 3pzs_A 154 QLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGLLL 233 (289)
T ss_dssp HHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHHHH
Confidence 999975322 2333 44566779999999985 5787 777777777787777766 999999999999999
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHhccc
Q 011689 415 YGILRGVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 415 ~~l~~g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
+++++|++ +++|+++|+++++.++.+.
T Consensus 234 ~~l~~g~~-~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 234 VNLLKGEP-LDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHTTCC-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCC-HHHHHHHHHHHHHHHHHHH
Confidence 99999998 9999999999987777653
No 57
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.71 E-value=1.2e-16 Score=158.43 Aligned_cols=162 Identities=15% Similarity=0.082 Sum_probs=123.5
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChh----hh--hhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT----CI--ERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~----~~--~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
..|.+.+ |+. ..+...+.+.++++.+++.+.++++||.... +. .....+.++.+++++|+++||..|++.|+
T Consensus 77 ~~~aik~-G~l-~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYT-GYL-GSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEE-CCC-SSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEE-CCC-CCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 6888888 664 3344578888888887767899999997432 11 11112344578899999999999999999
Q ss_pred CCCCC-----CcHHH-HHHHHhcCCCEEEEeecC-------CCeEEEEC--CeEEEeCCCCCCCCCccchhHHHHHHHHH
Q 011689 351 HFSSK-----ESPES-TTRYLSHFVPLVSVTDGA-------RGSYIGVK--GEAVYIPPSPCVPVDTCGAGDAYASGILY 415 (479)
Q Consensus 351 g~~~~-----~~~~~-a~~~l~~g~~~VVVT~G~-------~Ga~~~~~--~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 415 (479)
|.... ++.+. +.++.+.|++.|+||.|. .|++++++ ++.++++.+++. +||+||||+|+|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 97522 23333 455667899999999653 57777776 356677777765 8999999999999999
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHhccc
Q 011689 416 GILRGVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 416 ~l~~g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
+|++|++ +++|+++|+++++.++.+-
T Consensus 234 ~l~~g~~-l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 234 SLMQGDS-LPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHTTCC-HHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCC-HHHHHHHHHHHHHHHHHHH
Confidence 9999998 9999999999988888653
No 58
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.70 E-value=1.4e-16 Score=157.23 Aligned_cols=159 Identities=17% Similarity=0.112 Sum_probs=117.8
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHh-cCCEEEEeCCChh----h--hhhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHR-SGALVAVTASDVT----C--IERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~-~g~~v~~D~~~~~----~--~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
..|+|.+ |+. .. .+.+..+.+..++ .+.++++||.-.. + ......+.++.+++++|+++||..|++.|
T Consensus 74 ~~daik~-G~l-~s---~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L 148 (282)
T 3h74_A 74 HFDQALI-GYV-GS---VALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALL 148 (282)
T ss_dssp CCSEEEE-CCC-CS---HHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHH
T ss_pred ccCEEEE-CCC-CC---HHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHH
Confidence 6889988 653 22 3334444444444 4689999996321 1 11112233456889999999999999999
Q ss_pred hCCCC--CCcHHH-HHHHHh-cCC-CEEEEeecC----CCeEEEE-CCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHc
Q 011689 350 CHFSS--KESPES-TTRYLS-HFV-PLVSVTDGA----RGSYIGV-KGEAVYIPPSPCVPVDTCGAGDAYASGILYGILR 419 (479)
Q Consensus 350 ~g~~~--~~~~~~-a~~~l~-~g~-~~VVVT~G~----~Ga~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 419 (479)
+|... .++.+. +.++.+ .|+ +.|+||.|. .|+++++ +++.++++.+++. +||+||||+|+|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~ 227 (282)
T 3h74_A 149 TGAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGR 227 (282)
T ss_dssp HTCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHC
Confidence 98752 234544 455666 788 999999994 7888875 6667778777774 89999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHhccc
Q 011689 420 GVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 420 g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
|++ +++|+++|+++++.++++.
T Consensus 228 g~~-l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 228 GYP-LAPTLARANQWLNMAVAET 249 (282)
T ss_dssp TCC-HHHHHHHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHHHHHHH
Confidence 998 9999999999998888753
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.67 E-value=1.1e-15 Score=151.92 Aligned_cols=162 Identities=14% Similarity=0.051 Sum_probs=116.4
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcC------CEEEEeCCCh----hhhhhhhHHHHHHhcccCcEEEcCHHH
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSG------ALVAVTASDV----TCIERHYDDFWEIVGNYADIVFANSDE 345 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g------~~v~~D~~~~----~~~~~~~~~~~~~ll~~~Dvl~~N~~E 345 (479)
.++|+|.+ ||.. .+...+.+.++++..++.+ .++++||.-. .+......+.++.+++.+|+|+||..|
T Consensus 75 ~~~daV~t-G~l~-s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~E 152 (300)
T 3zs7_A 75 SNYRYILT-GYIN-NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFE 152 (300)
T ss_dssp GGCSEEEE-CCCC-CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHH
T ss_pred ccCCEEEE-CCCC-CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHH
Confidence 46887665 7753 3334677778888777655 7899999521 122222233445588999999999999
Q ss_pred HHHhhCCCCCC--cHHH-HHHHHhcCCCEEEEeecCCC----e--EEEE-C------CeEEEeCCCCCCCCCccchhHHH
Q 011689 346 ARAFCHFSSKE--SPES-TTRYLSHFVPLVSVTDGARG----S--YIGV-K------GEAVYIPPSPCVPVDTCGAGDAY 409 (479)
Q Consensus 346 a~~L~g~~~~~--~~~~-a~~~l~~g~~~VVVT~G~~G----a--~~~~-~------~~~~~vpa~~v~vvDttGAGDaF 409 (479)
++.|+|....+ +.+. +.++++.|++.|+||.|..| + +++. + ++.++++.++++. |++|+||+|
T Consensus 153 a~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~f 231 (300)
T 3zs7_A 153 ASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDVF 231 (300)
T ss_dssp HHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHHH
Confidence 99999975322 2333 44566789999999999988 2 3333 4 4677777777775 899999999
Q ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHhccc
Q 011689 410 ASGILYGILRGVSDLKGMGALAARIAATVVGQQ 442 (479)
Q Consensus 410 ~Agfl~~l~~g~~~l~eAl~~A~a~Aa~~v~~~ 442 (479)
+|+|+++| +|++ +++|+++|+++...++.+-
T Consensus 232 saal~a~l-~g~~-~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 232 AACLLAFS-HSHP-MDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp HHHHHHHH-TTSC-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-cCCC-HHHHHHHHHHHHHHHHHHH
Confidence 99999999 9998 9999999999977776543
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.49 E-value=2.5e-13 Score=133.18 Aligned_cols=164 Identities=9% Similarity=-0.008 Sum_probs=111.7
Q ss_pred hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc--cCcEEEcCHHHHHHh
Q 011689 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN--YADIVFANSDEARAF 349 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea~~L 349 (479)
.+.+..++++++..-.+ .+...+.+.++++.+++.+.++++||....... ++.+..+.+++ ++|+|+||..|++.|
T Consensus 53 ~~~~~~a~~lvi~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~-~~~~~~~~ll~~~~~~vitPN~~E~~~L 130 (272)
T 1ekq_A 53 ADMAKIAGALVLNIGTL-SKESVEAMIIAGKSANEHGVPVILDPVGAGATP-FRTESARDIIREVRLAAIRGNAAEIAHT 130 (272)
T ss_dssp HHHHHHSSEEEEECTTC-CHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBH-HHHHHHHHHHHHSCCSEEEECHHHHHHH
T ss_pred HHHHHhCCEEEEECCCC-CHHHHHHHHHHHHHHHhcCCeEEEeCCCcCccc-chHHHHHHHHccCCCeEECCCHHHHHHH
Confidence 34456789999842212 122357788888888899999999997543211 12233344555 899999999999999
Q ss_pred hCCC-C----------CCcHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHH
Q 011689 350 CHFS-S----------KESPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGI 417 (479)
Q Consensus 350 ~g~~-~----------~~~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l 417 (479)
+|.. . .++... +.++.+++...|++| |..+ +++++++.++++..+..+.|++|+||+|.|.+.+.+
T Consensus 131 ~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa~l 208 (272)
T 1ekq_A 131 VGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFC 208 (272)
T ss_dssp CC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred hCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHHHH
Confidence 9864 2 112223 344555544555555 8887 555666778888877777899999999988777777
Q ss_pred HcCCChHHHHHHHHHH----HHHHHhc
Q 011689 418 LRGVSDLKGMGALAAR----IAATVVG 440 (479)
Q Consensus 418 ~~g~~~l~eAl~~A~a----~Aa~~v~ 440 (479)
.+|.+ +.+|+++|++ ++.....
T Consensus 209 a~g~~-~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 209 AVEEN-PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp TTCSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCC-HHHHHHHHHHHHHHHHHHHHh
Confidence 78998 9999999886 4544443
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.46 E-value=5.5e-13 Score=143.11 Aligned_cols=159 Identities=17% Similarity=0.087 Sum_probs=114.7
Q ss_pred CCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCCh-----hhh-hhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDV-----TCI-ERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 277 ~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~-----~~~-~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
..|+|.+ |+. .+...+.+.++++..++.+.++++||.-. .+. +.....+.+.+++.+|||+||..|++.|+
T Consensus 91 ~~daIki-G~l--s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~ 167 (550)
T 3rm5_A 91 KCNVIKT-GML--TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLL 167 (550)
T ss_dssp CCSEEEE-CSC--CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHHH
T ss_pred CCCEEEE-CCC--CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHHh
Confidence 6899998 553 44446677777777766688999999631 111 11122234468899999999999999999
Q ss_pred CCC----CCCcHHH-HHHHHhcCC-CEEEEeecCCC--------e--EEEE--CCeEEEeCCCCCCCCCccchhHHHHHH
Q 011689 351 HFS----SKESPES-TTRYLSHFV-PLVSVTDGARG--------S--YIGV--KGEAVYIPPSPCVPVDTCGAGDAYASG 412 (479)
Q Consensus 351 g~~----~~~~~~~-a~~~l~~g~-~~VVVT~G~~G--------a--~~~~--~~~~~~vpa~~v~vvDttGAGDaF~Ag 412 (479)
|.. +.++... +.++.+.+. +.||||.|..+ + +++. +++.++++.++++++||+|+||+|+|+
T Consensus 168 g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fsaa 247 (550)
T 3rm5_A 168 GEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLASA 247 (550)
T ss_dssp SCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHHHH
Confidence 963 1123333 445666676 89999998763 3 4553 566777888888889999999999999
Q ss_pred HHHHHHcCCChHHHHHHHHHHHHHHHh
Q 011689 413 ILYGILRGVSDLKGMGALAARIAATVV 439 (479)
Q Consensus 413 fl~~l~~g~~~l~eAl~~A~a~Aa~~v 439 (479)
|++.|++|++ +.+|+++|++.-...+
T Consensus 248 iaa~La~G~~-l~eAv~~A~~~v~~ai 273 (550)
T 3rm5_A 248 IASNLARGYS-LPQSVYGGIEYVQNAV 273 (550)
T ss_dssp HHHHHHTTCC-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC-HHHHHHHHHHHHHHHH
Confidence 9999999998 9999999996544443
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.13 E-value=3.7e-10 Score=110.09 Aligned_cols=157 Identities=15% Similarity=0.030 Sum_probs=105.0
Q ss_pred hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc-cCcEEEcCHHHHHHhh
Q 011689 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN-YADIVFANSDEARAFC 350 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~-~~Dvl~~N~~Ea~~L~ 350 (479)
.+.++.++++++..-.+ .+...+.+..+++.+++.+.++++||....... +..+....++. .++||+||..|+..|+
T Consensus 51 ~~~~~~~dalvi~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~-~~~~~~~~ll~~~~~vITPN~~E~~~L~ 128 (265)
T 1v8a_A 51 EEMIRLADAVVINIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGATK-FRTRVSLEILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp HHHHHHCSEEEEECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBH-HHHHHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred HHHHHHCCEEEEEECCC-CHHHHHHHHHHHHHHHHcCCcEEEcCccccccc-cCHHHHHHHHHhCCcEEcCCHHHHHHHh
Confidence 44567899999962211 222235667778888888999999997643221 22222233332 3999999999999998
Q ss_pred CCCC----------C-CcH-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHH
Q 011689 351 HFSS----------K-ESP-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGIL 418 (479)
Q Consensus 351 g~~~----------~-~~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 418 (479)
|... . ++. +.++++.+++...|++| |..+. ++++++.+.++..+....+++|+||+|.|.+.+.+.
T Consensus 129 g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~lA 206 (265)
T 1v8a_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVA 206 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHHT
T ss_pred CCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHHHh
Confidence 8531 0 122 23445556666667777 77664 456667778877655556999999999999999999
Q ss_pred cCCChHHHHHHHHHHH
Q 011689 419 RGVSDLKGMGALAARI 434 (479)
Q Consensus 419 ~g~~~l~eAl~~A~a~ 434 (479)
+|.+ .+|+..|...
T Consensus 207 ~g~~--~~Aa~~a~~~ 220 (265)
T 1v8a_A 207 VTEP--LKATTSALVT 220 (265)
T ss_dssp TSCH--HHHHHHHHHH
T ss_pred cCCC--HHHHHHHHHH
Confidence 9986 4555565543
No 63
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.90 E-value=6.1e-08 Score=94.47 Aligned_cols=160 Identities=13% Similarity=0.112 Sum_probs=107.2
Q ss_pred hhhhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhc-ccCcEEEcCHHHHHH
Q 011689 270 CLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVG-NYADIVFANSDEARA 348 (479)
Q Consensus 270 ~~~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll-~~~Dvl~~N~~Ea~~ 348 (479)
...+.++.++.+++.--.+ .+...+.+..+++.+++.+.++++||...... .++.+..+.++ ..++||++|..|+..
T Consensus 51 e~~e~~~~a~alvIn~G~l-~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas-~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLGHL-SQEREQSLLAASDYARQVNKLTVVDLVGYGAS-DIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECCSC-CHHHHHHHHHHHHHHHHTTCCEEEECTTTTSC-HHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecCCC-ChHHHHHHHHHHHHHHHcCCcEEEchhhcCCc-ccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 3455677899999963221 22235677888888999999999999754322 12222222222 478999999999999
Q ss_pred hhCCCCC----C------------cH-HHHHHHHhcCC-CEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHH
Q 011689 349 FCHFSSK----E------------SP-ESTTRYLSHFV-PLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYA 410 (479)
Q Consensus 349 L~g~~~~----~------------~~-~~a~~~l~~g~-~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~ 410 (479)
|+|.... + +. +.++++.+++. ..|++|-+. -+++++++.+.++.-....-.++|.||++.
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--D~i~dg~~~~~~~~G~~~~~~v~GtGc~Ls 206 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--DVLVSQEQVIVLQNGVPELDCFTGTGDLVG 206 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--EEEECSSCEEEECCCCGGGGSSTTHHHHHH
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--eEEEcCCEEEEeCCCCcccCCcCCchHHHH
Confidence 9986421 1 11 22344555555 677777542 245556667777665444456799999999
Q ss_pred HHHHHHHHcCCChHHHHHHHHHHH
Q 011689 411 SGILYGILRGVSDLKGMGALAARI 434 (479)
Q Consensus 411 Agfl~~l~~g~~~l~eAl~~A~a~ 434 (479)
|.+.+.+.+|.+ +.+|+..|...
T Consensus 207 ~~Iaa~lA~g~~-~~~Aa~~A~~~ 229 (273)
T 3dzv_A 207 ALVAALLGEGNA-PMTAAVAAVSY 229 (273)
T ss_dssp HHHHHHHHHTCC-HHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-HHHHHHHHHHH
Confidence 999999999998 88887777554
No 64
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.87 E-value=5.7e-09 Score=103.84 Aligned_cols=172 Identities=12% Similarity=0.117 Sum_probs=104.6
Q ss_pred hhccCCcEEEEeccccCCcc---hHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhc--ccCcEEEcCHHHHH
Q 011689 273 NLISKTNIFIVEGYLFELPD---TIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVG--NYADIVFANSDEAR 347 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~~~~---~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll--~~~Dvl~~N~~Ea~ 347 (479)
..++.++++.+. +.+.. ..+.+.++++..+ .+.++++|+....+..... .++ +..+||+||..|++
T Consensus 107 ~~~~~~dav~IG---~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~-----~~l~~~~~~viTPN~~E~~ 177 (310)
T 2r3b_A 107 NVVEQADVILIG---PGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQGN-----FSLTYPEKVVFTPHQMEWQ 177 (310)
T ss_dssp HHHHHCSEEEEC---TTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHTT-----CCCSSGGGEEEECCHHHHH
T ss_pred HHhccCCEEEEe---CCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccch-----hhhcCCCCEEEcCCHHHHH
Confidence 445678999996 32321 2344445444333 4789999986554332111 112 46789999999999
Q ss_pred HhhCCCCCC---cH-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHH-HcCCC
Q 011689 348 AFCHFSSKE---SP-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGI-LRGVS 422 (479)
Q Consensus 348 ~L~g~~~~~---~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l-~~g~~ 422 (479)
.|+|....+ +. ..+.+.+ + .+|+..| .+.++++++.. ++........+|+|+||++ +|+++++ .+|++
T Consensus 178 ~L~g~~~~~~~~~~a~~aA~~l--g--~~VvlKG-~~~vi~~~~~~-~~~~~g~~~~~t~GtGD~L-ag~Iaa~lA~g~~ 250 (310)
T 2r3b_A 178 RLSHLPIEQQTLANNQRQQAKL--G--STIVLKS-HRTTIFHAGEP-FQNTGGNPGMATGGTGDTL-AGIIAGFLAQFKP 250 (310)
T ss_dssp HHHCCCGGGCCHHHHHHHHHHH--T--SEEEECS-TTCEEECSSSC-EECCCCCGGGCSTTHHHHH-HHHHHHHHHHSCS
T ss_pred HHhCCCCCcccchHHHHHHHHh--C--cEEEEeC-CceEEEECCEE-EEECCCCCCCCCCChHHHH-HHHHHHHHHcCCC
Confidence 999865221 12 2233333 3 3555556 56666664444 4455556678899999997 6666666 59998
Q ss_pred hHHHHHHHHHHHHHHHhcc---cCCCCCCCCHHHHHHHHHccccc
Q 011689 423 DLKGMGALAARIAATVVGQ---QGTRLSVRHASELAESFAYRIKS 464 (479)
Q Consensus 423 ~l~eAl~~A~a~Aa~~v~~---~G~~~~~p~~~el~~~l~~~~~~ 464 (479)
+.+|+.+|+.+.+..... .| .+ -...+|.+.+...+..
T Consensus 251 -~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~~~~~~ 291 (310)
T 2r3b_A 251 -TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQALPTYMKK 291 (310)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHHHHHHH
Confidence 888989887766654332 24 22 3566777666655444
No 65
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.86 E-value=1.3e-08 Score=101.23 Aligned_cols=173 Identities=10% Similarity=0.102 Sum_probs=104.5
Q ss_pred hhccCCcEEEEeccccCCcc---hHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHH-hcccCcEEEcCHHHHHH
Q 011689 273 NLISKTNIFIVEGYLFELPD---TIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEI-VGNYADIVFANSDEARA 348 (479)
Q Consensus 273 ~~l~~ad~v~i~g~~~~~~~---~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~-ll~~~Dvl~~N~~Ea~~ 348 (479)
..++.++++.+. +.+.. ..+.+.++++..+ .+.++++|+....+..... +. +.+..+||+||..|++.
T Consensus 121 ~~~~~~dav~IG---~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~----~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 121 EQITAADVVLMG---PGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKRK----PAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHHCSEEEEC---TTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHCC-----CCCSCSCEEEECCSCC-CT
T ss_pred HHhccCCEEEEc---CCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccCh----hhcCCCCCEEECCcHHHHHH
Confidence 445678999996 32221 2344444444333 4789999986544332111 11 21478999999999999
Q ss_pred hhCCCCCCc---H-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHH-Hc-CCC
Q 011689 349 FCHFSSKES---P-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGI-LR-GVS 422 (479)
Q Consensus 349 L~g~~~~~~---~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l-~~-g~~ 422 (479)
|+|....+. . ..+.+.+.. ..+|+..| .+.++++++.. ++........+|+|+||+| +|+++++ .+ |++
T Consensus 193 L~g~~~~~~~~d~~~~aa~~l~~--g~~VvlkG-~~~~i~~~~~~-~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~~g~~ 267 (311)
T 3bgk_A 193 LSGLTIPEQIEAATQTALAHFPK--ETILVAKS-HQTKIYQGQKI-GHIQVGGPYQATGGMGDTL-AGMIAGFVAQFHTD 267 (311)
T ss_dssp TTCCCSTTCCHHHHHHHHTTSCT--TCEEEECS-SSCEEEETTEE-EEECCCCGGGCSTTHHHHH-HHHHHHHHHHCCSC
T ss_pred HhCCCCCcchhhHHHHHHHHHhc--CCEEEEeC-CCeEEEECCEE-EEECCCCCCCCCCcHHHHH-HHHHHHHHHccCCC
Confidence 998753221 2 222222222 34455555 56777774444 4445566778999999997 6666666 58 998
Q ss_pred hHHHHHHHHHHHHHHHhcc---cCCCCCCCCHHHHHHHHHccc
Q 011689 423 DLKGMGALAARIAATVVGQ---QGTRLSVRHASELAESFAYRI 462 (479)
Q Consensus 423 ~l~eAl~~A~a~Aa~~v~~---~G~~~~~p~~~el~~~l~~~~ 462 (479)
+.+|+++|+.+.+..... .| . . -...+|.+.+.+.+
T Consensus 268 -~~eA~~~A~~~~~~ag~~a~~~g-~-~-~~a~dl~~~l~~~~ 306 (311)
T 3bgk_A 268 -RFEVAAAAVFLHSYIADQLSKEA-Y-V-VLPTRISAEITRVM 306 (311)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTTC-S-S-CCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhC-C-C-CCHHHHHHHHHHHH
Confidence 999999997766654332 24 2 2 35667777665543
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.81 E-value=7.6e-08 Score=101.69 Aligned_cols=178 Identities=12% Similarity=0.105 Sum_probs=111.9
Q ss_pred hhhccCCcEEEEeccccCCcchHHHHHHHHH-HHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 272 VNLISKTNIFIVEGYLFELPDTIRTITKACE-VAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~-~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.+.+..++++++. +.+.... ...++++ .+++.+.++++|+...+... .++++. .+..+||+||..|+..|+
T Consensus 315 ~~~~~~~davviG---pGlg~~~-~~~~~~~~~l~~~~~pvVlDadgl~~l~---~~ll~~-~~~~~vlTPN~~E~~~L~ 386 (502)
T 3rss_A 315 LELSKDVDVVAIG---PGLGNNE-HVREFVNEFLKTLEKPAVIDADAINVLD---TSVLKE-RKSPAVLTPHPGEMARLV 386 (502)
T ss_dssp HHHHTTCSEEEEC---TTCCCSH-HHHHHHHHHHHHCCSCEEECHHHHHTCC---HHHHHH-CSSCEEECCCHHHHHHHH
T ss_pred HHHhccCCEEEEe---CCCCCCH-HHHHHHHHHHHhcCCCEEEeCcccchhc---HHHHhc-cCCCEEEeCCHHHHHHHh
Confidence 3456789999996 3333212 2223333 45566899999986554332 223321 246799999999999999
Q ss_pred CCCC---CCcHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHH
Q 011689 351 HFSS---KESPESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGM 427 (479)
Q Consensus 351 g~~~---~~~~~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eA 427 (479)
|... .++.+.++++.+++. .+|+..|. +.++++.+..+..+ ......+|+|+||+|+|.+.+.+.+|++ +.+|
T Consensus 387 g~~~~~~~~d~~aa~~la~~~~-~~VvlKG~-~~vi~~~~~~~~~~-~g~~~~at~GsGD~Lag~iaa~lA~g~~-~~~A 462 (502)
T 3rss_A 387 KKTVGDVKYNYELAEEFAKEND-CVLVLKSA-TTIVTDGEKTLFNI-TGNTGLSKGGSGDVLTGMIAGFIAQGLS-PLEA 462 (502)
T ss_dssp TCCHHHHTTCHHHHHHHHHHHT-SEEEECSS-SEEEECSSCEEEEC-CCCGGGSSTTHHHHHHHHHHHHHHTTCC-HHHH
T ss_pred CCCccchHHHHHHHHHHHHHcC-CEEEEeCC-CeEEEcCCEEEEEC-CCCCccccCCchHHHHHHHHHHHhCCCC-HHHH
Confidence 8641 122445555655543 35555664 45566655544433 4455678999999988777777789998 8999
Q ss_pred HHHHHHHHHHHhccc--CCCCCCCCHHHHHHHHHcccc
Q 011689 428 GALAARIAATVVGQQ--GTRLSVRHASELAESFAYRIK 463 (479)
Q Consensus 428 l~~A~a~Aa~~v~~~--G~~~~~p~~~el~~~l~~~~~ 463 (479)
+.+|+..-+.+-... |.. --...+|.+.+.+.+.
T Consensus 463 a~~A~~~hg~Ag~~aa~g~~--~~~a~dl~~~lp~~~~ 498 (502)
T 3rss_A 463 STVSVYLHGFAAELFEQDER--GLTASELLRLIPEAIR 498 (502)
T ss_dssp HHHHHHHHHHHHHTCSSCGG--GCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCC--CcCHHHHHHHHHHHHH
Confidence 998877666553322 322 2356777777665443
No 67
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.75 E-value=1.3e-07 Score=92.56 Aligned_cols=174 Identities=14% Similarity=0.108 Sum_probs=107.8
Q ss_pred ccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCCCC
Q 011689 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHFSS 354 (479)
Q Consensus 275 l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~~~ 354 (479)
++.+|++++. +.+.. .+...++++.+.+.+.++++|....+. ... . -....+||+||..|++.|+|...
T Consensus 96 l~~~davviG---PGlg~-~~~~~~~~~~~l~~~~p~VlDAdal~~-~~l-----~-~~~~~~vlTPN~~E~~~L~g~~~ 164 (279)
T 3rpz_A 96 EETYRAIAIG---PGLPQ-TESVQQAVDHVLTADCPVILDAGALAK-RTY-----P-KREGPVILTPHPGEFFRMTGVPV 164 (279)
T ss_dssp SSCCSEEEEC---TTCCC-CHHHHHHHHHHTTSSSCEEECGGGCCS-CCC-----C-CCSSCEEECCCHHHHHHHHCCCH
T ss_pred ccCCCEEEEC---CCCCC-CHHHHHHHHHHHhhCCCEEEECCccch-hhh-----h-hccCCEEEecCHHHHHHHhCCCc
Confidence 5789999996 33332 234456666666778899999865432 000 0 01457899999999999998652
Q ss_pred ---CCcH-HHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHHHHHHH
Q 011689 355 ---KESP-ESTTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLKGMGAL 430 (479)
Q Consensus 355 ---~~~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~eAl~~ 430 (479)
.++. +.++++.+++.. +|+-.|. +.++++.+..+++.........|+|+||++.+.+.+.+.+|++ +.+|+..
T Consensus 165 ~~~~~d~~~aa~~la~~~~~-~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~-~~~A~~~ 241 (279)
T 3rpz_A 165 NELQKKRAEYAKEWAAQLQT-VIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED-PKHAVLN 241 (279)
T ss_dssp HHHTTSHHHHHHHHHHHHTS-EEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS-HHHHHHH
T ss_pred cchHHHHHHHHHHHHHHcCe-EEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC-HHHHHHH
Confidence 1223 334555554433 4444454 4556565534445444455678999999875555555569998 8899888
Q ss_pred HHH----HHHHHhcccCCCCCCCCHHHHHHHHHccccc
Q 011689 431 AAR----IAATVVGQQGTRLSVRHASELAESFAYRIKS 464 (479)
Q Consensus 431 A~a----~Aa~~v~~~G~~~~~p~~~el~~~l~~~~~~ 464 (479)
|.. +|-......|... -...||.+.+.+.+..
T Consensus 242 a~~lh~~Ag~~a~~~~g~~~--~~a~dl~~~lp~~~~~ 277 (279)
T 3rpz_A 242 AVYLHGACAELWTDEHSAHT--LLAHELSDILPRVWKR 277 (279)
T ss_dssp HHHHHHHHHHHHHHHSCTTS--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCC--cCHHHHHHHHHHHHHH
Confidence 864 3344444455432 2567887777655443
No 68
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.65 E-value=2.7e-06 Score=88.30 Aligned_cols=226 Identities=12% Similarity=0.040 Sum_probs=133.1
Q ss_pred cCCCCCCCCCccEEEEcCceeeeeeccChHHHHh----hc------------------------------cCCCCccccc
Q 011689 113 SGSASVLPERWDVLGLGQAMVDFSGMVDDDFLER----LG------------------------------LEKGTRKLVN 158 (479)
Q Consensus 113 ~~~~~~~~~~~~IlviG~~~iD~i~~v~~~~~~~----~~------------------------------~~~g~~~l~~ 158 (479)
.-+..+.+..+.|++-=+++||.+...+.+.+++ ++ -..+.++.+.
T Consensus 18 ~~~~~~~~~~~~i~~ayN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~ 97 (474)
T 3drw_A 18 YFQGHMIPEHLSIYTAYNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLV 97 (474)
T ss_dssp TTTC-CCCTTCEEEEESCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred eeecccccccCceEEEecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecc
Confidence 4455666777889999999999999998753322 11 1234445554
Q ss_pred cchhhhhhhhccCCCceeecCchHHHHHHHHHHhCCCCCCCCCccEEEEEEeCCCchHHHHHHHHHhcCCCceee-----
Q 011689 159 HEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSE----- 233 (479)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~v----- 233 (479)
.++..+.++... ..-..+.||.+.-+|..|+++|.+ +|.+.+..+. +...+.| ..+|-.-.+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~GGnA~imAn~La~lg~~-------~Vi~~~p~~s----k~~~~ll-~~~i~~p~~e~g~l 164 (474)
T 3drw_A 98 NEKMNEWFDKTF-RYEEERLGGQAGIIANTLAGLKIR-------KVIAYTPFLP----KRLAELF-KKGVLYPVVENGEL 164 (474)
T ss_dssp CTTHHHHHHHHC-CCSEEEEESHHHHHHHHHHHTTCS-------EEEECCSCCC----HHHHTTS-CTTEEEEEESSSSE
T ss_pred cHhHHHHHHHhc-ccceEecCChHHHHHHHHHHcCCC-------cEEEecCcCC----HHHHHhc-CCcceeecccCCce
Confidence 444444444221 122568999999999999999983 3666666554 3333444 222211100
Q ss_pred ------e-e-CCCCceEEEEEE---------------CCCCCeEEEEecCCCC-CCCCChhhh----hhccCCcEEEEec
Q 011689 234 ------P-I-KDGTTGTVIVLT---------------TPDAQRAMLAYQGTSS-TINYDPCLV----NLISKTNIFIVEG 285 (479)
Q Consensus 234 ------~-~-~~~~T~~~~v~~---------------~~~G~rt~~~~~ga~~-~l~~~~~~~----~~l~~ad~v~i~g 285 (479)
. . .+.+.-.-+++- .+.-.|.++.++..+. .+...+... +..+.+|.++++|
T Consensus 165 ~l~~~~ea~~~~~~~~iH~I~Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSG 244 (474)
T 3drw_A 165 QFKPIQEAYREGDPLKINRIFEFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSG 244 (474)
T ss_dssp EEEEGGGCCCTTCCCCEEEEEEECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECC
T ss_pred eecCchhhhccCCCCCcEEEEEcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEec
Confidence 0 0 001122222222 2333455555555554 554433322 2223699999999
Q ss_pred cccCCc-----ch-H---HHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 286 YLFELP-----DT-I---RTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 286 ~~~~~~-----~~-~---~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
+.+-.. .. . +.+.+.++..+..+.+|-|...... ...+...+++.+++++|.+-+|++|+..+++.
T Consensus 245 lq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~-~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 245 YQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQ-DRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp GGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCS-CHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCccc-cHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 965333 11 2 3333555555678999999886532 22455677788999999999999999988764
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.25 E-value=2.6e-05 Score=83.01 Aligned_cols=156 Identities=12% Similarity=0.030 Sum_probs=100.6
Q ss_pred hhhhccC-CcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcc--cCcEEEcCHHHHH
Q 011689 271 LVNLISK-TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGN--YADIVFANSDEAR 347 (479)
Q Consensus 271 ~~~~l~~-ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~--~~Dvl~~N~~Ea~ 347 (479)
..+..+. ++.+++. +.+....+.+..+++.+++.+.++++||...... ..+.+..+.+++ ..+||++|..|+.
T Consensus 299 ~~e~~~~~~~alvin---~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~-~~r~~~~~~Ll~~~~~~vItpN~~E~~ 374 (540)
T 3nl6_A 299 VNDLAAIPHATLLLN---TGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSAT-ETRLLLNNKLLTFGQFSCIKGNSSEIL 374 (540)
T ss_dssp HHHHTTSTTCEEEEE---SSCSCCHHHHHHHHHHHHTTTCCEEEECTTCTTS-HHHHHHHHHHTTSCCCSEEEECHHHHH
T ss_pred HHHHHhccCCeEEEe---CCCCCHHHHHHHHHHHHHHcCCCEEEChHHhhcc-cccHHHHHHHHhhCCCeEECCCHHHHH
Confidence 4455676 8999997 3332237888888888999999999999765432 223445556666 7899999999999
Q ss_pred HhhCCCC-------------CCcH-HHHHHHHhcCCCEEEEeecCCCeEEEEC-------------------CeEEEeCC
Q 011689 348 AFCHFSS-------------KESP-ESTTRYLSHFVPLVSVTDGARGSYIGVK-------------------GEAVYIPP 394 (479)
Q Consensus 348 ~L~g~~~-------------~~~~-~~a~~~l~~g~~~VVVT~G~~Ga~~~~~-------------------~~~~~vpa 394 (479)
.|+|... .++. +.++++.++....|++| |+. -+++++ +..+.++.
T Consensus 375 ~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (540)
T 3nl6_A 375 GLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEA 452 (540)
T ss_dssp HHTTC--------------CCHHHHHHHHHHHHHTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCCTTSSCEEEEEC
T ss_pred HHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEc-CCC-eEEECCCccccccccccccccccCCccEEEECC
Confidence 9998541 0111 22344445555555555 433 234454 44556654
Q ss_pred CC-CCCCCccchhHHHHHHHHHHHHcCC---ChHHHHHHHHHH
Q 011689 395 SP-CVPVDTCGAGDAYASGILYGILRGV---SDLKGMGALAAR 433 (479)
Q Consensus 395 ~~-v~vvDttGAGDaF~Agfl~~l~~g~---~~l~eAl~~A~a 433 (479)
-. .-.-.++|.||++.+.+.+.+..+. + ..+|+..|..
T Consensus 453 G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-~~~Aa~~a~~ 494 (540)
T 3nl6_A 453 GPIEIMGDITASGCSLGSTIACMIGGQPSEGN-LFHAVVAGVM 494 (540)
T ss_dssp SCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-HHHHHHHHHH
T ss_pred CChhhccCccCchHHHHHHHHHHHhcCcCCCC-HHHHHHHHHH
Confidence 44 2223479999999988877777887 4 5666555543
No 70
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.12 E-value=3.6e-05 Score=74.39 Aligned_cols=154 Identities=16% Similarity=0.122 Sum_probs=90.6
Q ss_pred hhhccCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHH-hcccCcEEEcCHHHHHHhh
Q 011689 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEI-VGNYADIVFANSDEARAFC 350 (479)
Q Consensus 272 ~~~l~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~-ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.+..+.++.++++--.+ .+...+.+..+.+.+++.++++++||...... .++.+.... +....++|++|..|+..|.
T Consensus 51 ~e~~~~a~al~iNiGtl-~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas-~~R~~~~~~ll~~~~~vIrgN~sEi~~L~ 128 (265)
T 3hpd_A 51 EEMIRLADAVVINIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGAT-KFRTRVSLEILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp HHHHHHCSEEEEECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTB-HHHHHHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred HHHHHHCCeEEEECCCC-ChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCc-HHHHHHHHHHHhcCCcEEcCCHHHHHHHh
Confidence 44556688899872222 22346778888899999999999999864422 122222222 2347899999999999998
Q ss_pred CCCC--------CC---cHHH-HHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHH
Q 011689 351 HFSS--------KE---SPES-TTRYLSHFVPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGIL 418 (479)
Q Consensus 351 g~~~--------~~---~~~~-a~~~l~~g~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 418 (479)
|... .+ +... ++++.++....|++| |+. -++.++++.+.++.-..-.-..+|.||+..+ ++++++
T Consensus 129 g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlk-G~~-d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg-~iaa~l 205 (265)
T 3hpd_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAV-DYVSDGRRTFAVYNGHELLGRVTGTGCMVAA-LTGAFV 205 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSS-EEEECSSCEEEECCCCGGGGGSTTHHHHHHH-HHHHHH
T ss_pred cccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEe-CCC-eEEEcCCEEEEECCCChHhhcCCccchHHHH-HHHHHH
Confidence 7421 01 1222 333444444555555 543 3455556666665433222344899999755 555555
Q ss_pred -cCCChHHHHHHHHH
Q 011689 419 -RGVSDLKGMGALAA 432 (479)
Q Consensus 419 -~g~~~l~eAl~~A~ 432 (479)
++ ++++ |...|.
T Consensus 206 A~~-~~~~-Aa~~a~ 218 (265)
T 3hpd_A 206 AVT-EPLK-ATTSAL 218 (265)
T ss_dssp TTS-CHHH-HHHHHH
T ss_pred hcC-ChHH-HHHHHH
Confidence 55 4354 444443
No 71
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.10 E-value=0.0003 Score=73.02 Aligned_cols=209 Identities=12% Similarity=0.035 Sum_probs=119.7
Q ss_pred cEEEEcCceeeeeeccChH----HHHhhccC------------------------------CCCccccccchhhhhhhhc
Q 011689 124 DVLGLGQAMVDFSGMVDDD----FLERLGLE------------------------------KGTRKLVNHEERGRVLRAM 169 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~----~~~~~~~~------------------------------~g~~~l~~~~~~~~~~~~~ 169 (479)
+|++-=++++|.+.....+ ++++++.. .+.++.+..++..+.+...
T Consensus 32 ~i~~Gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~~ 111 (467)
T 1gc5_A 32 GVLLAYNTNIDAIKYLDADDLEKRVTEKGKEKVFEIIENPPEKISSIEELLGGILRSIKLGKAMEWFVESEEVRRYLREW 111 (467)
T ss_dssp CEEEESCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHSCCCEEEEBCCHHHHHHHHHH
T ss_pred cEEEEecccEEEEEeCchHHHHHHHHHcCCcccccccccCccccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHHh
Confidence 5777779999999988762 33333332 2444444443333333332
Q ss_pred cCCCcee-ecCchHHHHHHHHHHhCCCCCCCCCccEEE--EEEeCCCchHHHHHHHHHhcCCCceeee----e-------
Q 011689 170 DGCSYKA-AAGGSLSNSLVALARLGGKPIGGPALNVAM--TGSVGSDPLGGFYRAKLRRANVAFCSEP----I------- 235 (479)
Q Consensus 170 ~~~~~~~-~~GG~a~NvA~ala~LG~~~~~~~~~~v~~--ig~VG~D~~G~~i~~~L~~~GVd~~~v~----~------- 235 (479)
.+.. +.||.+.-+|..|+++|. ++.+ ++.+ ++...+.|...+|..-.+. +
T Consensus 112 ---~~~~~~mGGnAgimAn~la~lg~--------~~vl~~~~~~-----s~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea 175 (467)
T 1gc5_A 112 ---GWDELRIGGQAGIMANLLGGVYR--------IPTIVHVPQN-----PKLQAELFVDGPIYVPVFEGNKLKLVHPKDA 175 (467)
T ss_dssp ---CCSEEEEESHHHHHHHHHHHTSC--------CCEEECCSCC-----CHHHHTTSCSSSEEEEEECSSCEEEECGGGS
T ss_pred ---cCcccccCccHHHHHHHHHhcCC--------CEEEEcCCCC-----CHHHHHhcCCCCeeeeeccCCceecccchhh
Confidence 2222 999999999999999999 4444 4443 4455555542333211000 0
Q ss_pred -CCCCceEEEEEECCCC-----------CeEEEEecCCCCCCCCChhhhhhc----cCCcEEEEeccccCCc-----c-h
Q 011689 236 -KDGTTGTVIVLTTPDA-----------QRAMLAYQGTSSTINYDPCLVNLI----SKTNIFIVEGYLFELP-----D-T 293 (479)
Q Consensus 236 -~~~~T~~~~v~~~~~G-----------~rt~~~~~ga~~~l~~~~~~~~~l----~~ad~v~i~g~~~~~~-----~-~ 293 (479)
.+.+.-.-+++-.+.| .|-++.++..+..+...+...+.+ .++|.++++|+.+-.. . .
T Consensus 176 ~~~~~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~ 255 (467)
T 1gc5_A 176 IAEEEELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTY 255 (467)
T ss_dssp CCSCCCCEEEEEEECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBH
T ss_pred ccCCCCcceEEEEcCCCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhH
Confidence 0122333333333333 345555555555555544433333 4599999999964322 1 1
Q ss_pred HHHHHH---HHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhh
Q 011689 294 IRTITK---ACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFC 350 (479)
Q Consensus 294 ~~~~~~---~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~ 350 (479)
.+.+.+ .++.....++++-+...... .......++ .+++++|.+-+|++|+..++
T Consensus 256 ~~~l~~~~~~l~~l~~~~~~iH~E~As~~-~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 256 KDVLDRVESHLNILNRYNVKSHFEFAYTA-NRRVREALV-ELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCCC-CHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCeEEEEECCcc-cHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 222333 33332557899999886532 223456777 89999999999999998554
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.05 E-value=6.9e-05 Score=77.67 Aligned_cols=209 Identities=13% Similarity=0.082 Sum_probs=116.1
Q ss_pred cEEEEcCceeeeeeccChH----HHHhhccC------------------------------CCCccccccchhhhhhhhc
Q 011689 124 DVLGLGQAMVDFSGMVDDD----FLERLGLE------------------------------KGTRKLVNHEERGRVLRAM 169 (479)
Q Consensus 124 ~IlviG~~~iD~i~~v~~~----~~~~~~~~------------------------------~g~~~l~~~~~~~~~~~~~ 169 (479)
+|++-=++++|.+.....+ ++++++.. .+.++.+..++..+.+...
T Consensus 27 ~i~~gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~~ 106 (457)
T 1l2l_A 27 GVLLAYNTNIDAIKYLKREDLEKRIEKVGKEEVLRYSEELPKEIETIPQLLGSILWSIKRGKAAELLVVSREVREYMRKW 106 (457)
T ss_dssp CEEEEECCEEEEECBCCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHHTCCEEEEBCCHHHHHHHHHH
T ss_pred cEEEEecccEEEEEECchHHHHHHHHHhCCcccccccccCCcccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHHh
Confidence 5666669999999988762 33333322 2334444333333322221
Q ss_pred cCCCceeecCchHHHHHHHHHHhCCCCCCCCCccEEE--EEEeCCCchHHHHHHHHHhcCCCceeee----e--------
Q 011689 170 DGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNVAM--TGSVGSDPLGGFYRAKLRRANVAFCSEP----I-------- 235 (479)
Q Consensus 170 ~~~~~~~~~GG~a~NvA~ala~LG~~~~~~~~~~v~~--ig~VG~D~~G~~i~~~L~~~GVd~~~v~----~-------- 235 (479)
.-. ..+.||.+.-+|..|+++|. ++.+ ++.+ ++...+.|...+|..-.+. .
T Consensus 107 -~~~-~~~mGGnA~imAn~la~lg~--------~~vl~~~~~~-----s~~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~ 171 (457)
T 1l2l_A 107 -GWD-ELRMGGQVGIMANLLGGVYG--------IPVIAHVPQL-----SELQASLFLDGPIYVPTFERGELRLIHPREFR 171 (457)
T ss_dssp -CCS-EEEEESHHHHHHHHHTTTSC--------CCEEECCSSC-----CHHHHHTSCSSSEEEEC------CEECGGGC-
T ss_pred -cCC-ccccCchHHHHHHHHHHcCC--------CEEEEcCCCC-----CHHHHHhcCCCCeEeeeccCCceeccCchhhc
Confidence 112 22999999999999999998 4443 3443 4445555542222211000 0
Q ss_pred CCCCceEEEEEE-----------CCCCCeEEEEecCCCCCCCCChhhhhhc----cCCcEEEEeccccCCcch----HHH
Q 011689 236 KDGTTGTVIVLT-----------TPDAQRAMLAYQGTSSTINYDPCLVNLI----SKTNIFIVEGYLFELPDT----IRT 296 (479)
Q Consensus 236 ~~~~T~~~~v~~-----------~~~G~rt~~~~~ga~~~l~~~~~~~~~l----~~ad~v~i~g~~~~~~~~----~~~ 296 (479)
.+.+.-.-+++- .+.-.|-++.++..+..+...+...+.+ .++|.++++|+.+-...+ .+.
T Consensus 172 ~~~~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~ 251 (457)
T 1l2l_A 172 KGEEDCIHYIYEFPRNFKVLDFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKL 251 (457)
T ss_dssp ---CCCEEECCEECTTCEETTEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHH
T ss_pred cCCCCcceEEEEcCCCCeecceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHH
Confidence 001122222222 2333455566665555555444433333 459999999996432211 111
Q ss_pred HHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHh
Q 011689 297 ITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAF 349 (479)
Q Consensus 297 ~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L 349 (479)
..+.++..+..++++-+...... .......++ .+++++|.+-+|++|+..+
T Consensus 252 ~~~~i~~L~~~~~~iH~E~As~~-~~~l~~~i~-~ilp~vDSlGmNEqELa~l 302 (457)
T 1l2l_A 252 VREHLKILNDLGIRAHLEFAFTP-DEVVRLEIV-KLLKHFYSVGLNEVELASV 302 (457)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCS-SHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEEECCcc-cHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 22222233678899999887532 223456777 7999999999999999875
No 73
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.02 E-value=9.6e-05 Score=76.72 Aligned_cols=161 Identities=12% Similarity=0.018 Sum_probs=95.1
Q ss_pred ecCchHHHHHHHHHHhCCCCCCCCCccEEE--EEEeCCCchHHHHHHHHHhcCCCceeee------------eCCCCceE
Q 011689 177 AAGGSLSNSLVALARLGGKPIGGPALNVAM--TGSVGSDPLGGFYRAKLRRANVAFCSEP------------IKDGTTGT 242 (479)
Q Consensus 177 ~~GG~a~NvA~ala~LG~~~~~~~~~~v~~--ig~VG~D~~G~~i~~~L~~~GVd~~~v~------------~~~~~T~~ 242 (479)
+.||.+..+|..|+++|. ++.+ ++.+|. .+.+.|...+|..-.+. ....+...
T Consensus 109 ~~GGnA~imAn~la~lg~--------~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~i 175 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYG--------VPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCI 175 (455)
T ss_dssp EEESHHHHHHHHHTTTTC--------CCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCE
T ss_pred ccCCcHHHHHHHHHHcCC--------CEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCc
Confidence 999999999999999999 5555 555543 44555542233321110 01234455
Q ss_pred EEEEECCCCC-----------eEEEEecCCCCCCCCChhhhhhcc----CCcEEEEeccccCCcch-HHHHHHHH---HH
Q 011689 243 VIVLTTPDAQ-----------RAMLAYQGTSSTINYDPCLVNLIS----KTNIFIVEGYLFELPDT-IRTITKAC---EV 303 (479)
Q Consensus 243 ~~v~~~~~G~-----------rt~~~~~ga~~~l~~~~~~~~~l~----~ad~v~i~g~~~~~~~~-~~~~~~~l---~~ 303 (479)
.+++-.+.|+ |-++.++-.+..+...+...+.+. ++|.++++|+.+-.... .+...+.+ +.
T Consensus 176 H~I~Ef~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~ 255 (455)
T 1ua4_A 176 HYIYEFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEV 255 (455)
T ss_dssp EEEEEECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHH
Confidence 5555444554 333344434444443333334444 49999999996532211 12222222 22
Q ss_pred HHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC
Q 011689 304 AHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF 352 (479)
Q Consensus 304 ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~ 352 (479)
.+..+.++.|++.+..- ......++ .+++++|.+-+|++|+..+.+.
T Consensus 256 L~~~~~~iH~ElAs~~~-~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~ 302 (455)
T 1ua4_A 256 LNEREIPVHLEFAFTPD-EKVREEIL-NVLGMFYSVGLNEVELASIMEI 302 (455)
T ss_dssp HHHTTCCEEEECCCCCC-HHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred hcCCCceEEEEeCCccC-HHHHHHHH-hhhccCcccccCHHHHHHHHHH
Confidence 36677899999875432 23445666 7899999999999999877553
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=96.95 E-value=0.013 Score=61.14 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=96.4
Q ss_pred cCCcEEEEeccccCCcchHHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEcCHHHHHHhhCC---
Q 011689 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFANSDEARAFCHF--- 352 (479)
Q Consensus 276 ~~ad~v~i~g~~~~~~~~~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~N~~Ea~~L~g~--- 352 (479)
.+++++.+.. .+..... + +.++++ .. ++++|....+.. ++. ..++...||+||.-|++.|++.
T Consensus 291 ~~~~a~~iGP-GlG~~~~-~-l~~~l~----~~-p~VlDADaL~~~-----~~~-~~~~~~~VlTPh~~E~~rL~g~~~~ 356 (475)
T 3k5w_A 291 NLLSAFALGM-GLENIPK-D-FNRWLE----LA-PCVLDAGVFYHK-----EIL-QALEKEAVLTPHPKEFLSLLNLVGI 356 (475)
T ss_dssp SSCSEEEECT-TCSSCCT-T-HHHHHH----HS-CEEEEGGGGGSG-----GGG-TTTTSSEEEECCHHHHHHHHHHTSC
T ss_pred cCCCEEEEcC-CCCCCHH-H-HHHHHh----cC-CEEEECcccCCc-----hhh-hccCCCEEECCCHHHHHHHhCCccC
Confidence 5789999952 2332222 2 444432 24 899997544321 111 1234568999999999999975
Q ss_pred --CCCC----cHHHHHHHHhcC-CCEEEEeecCCCeEEEECCeEEEeCCCCCCCCCccchhHHHHHHHHHHHHcCCChHH
Q 011689 353 --SSKE----SPESTTRYLSHF-VPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGILRGVSDLK 425 (479)
Q Consensus 353 --~~~~----~~~~a~~~l~~g-~~~VVVT~G~~Ga~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~l~ 425 (479)
...+ ..+.++++.++. ...|++| |.. .++++++..+..+.- ..-..|.|.||++.+.+.+-+.+|++ +.
T Consensus 357 ~v~~~~~~~d~~~aa~~la~~~g~~~VvlK-G~~-~vI~~~~~~~~~~~g-~~~mat~GtGdvLsg~Iaa~lA~g~~-~~ 432 (475)
T 3k5w_A 357 NISMLELLDNKLEIARDFSQKYPKVVLLLK-GAN-TLIAHQGQVFINILG-SVALAKAGSGDVLAGLILSLLSQNYT-PL 432 (475)
T ss_dssp CCCTTSGGGSCC--CHHHHHHCTTEEEEEC-SSS-EEEEETTEEEEECCC-CGGGCSTTHHHHHHHHHHHHHHTTCC-HH
T ss_pred CCCcchhHHHHHHHHHHHHHHcCCeEEEEe-CCC-CEEECCCEEEEECCC-CCCCCCCCHHHHHHHHHHHHHHcCCC-HH
Confidence 3111 123445555555 4455554 443 344455655544432 23356899999999988888899998 77
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHc
Q 011689 426 GMGALAARIAATVVGQQGTRLSVRHASELAESFAY 460 (479)
Q Consensus 426 eAl~~A~a~Aa~~v~~~G~~~~~p~~~el~~~l~~ 460 (479)
+|+..|...-+.+-.......+ -...+|.+.+.+
T Consensus 433 ~Aa~~a~~lhg~ag~~a~~~~~-~~a~dl~~~l~~ 466 (475)
T 3k5w_A 433 DAAINASLAHALASLEFKNNYA-LTPLDLIEKIKQ 466 (475)
T ss_dssp HHHHHHHHHHHHGGGGCSSTTC-CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccCCC-cCHHHHHHHhhh
Confidence 7777765554444333211112 356777776653
No 75
>3ost_A Serine/threonine-protein kinase KCC4; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.69A {Saccharomyces cerevisiae} PDB: 3osm_A
Probab=50.10 E-value=4.9 Score=33.66 Aligned_cols=21 Identities=43% Similarity=0.841 Sum_probs=10.6
Q ss_pred ccCCccchhhhhhhhhccccc
Q 011689 24 HHHPHRTKLQALVFRKFSLGK 44 (479)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~ 44 (479)
|||.|...-....|||||-+.
T Consensus 3 ~~~~~~~~~~~~f~rkfs~~~ 23 (128)
T 3ost_A 3 HHHHHKKPPNSVLLKKFSKGK 23 (128)
T ss_dssp ------CCCHHHHGGGSCSSE
T ss_pred ccccCCCCCchhhhhhhcCCC
Confidence 555566666777788888544
No 76
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=30.01 E-value=2.5e+02 Score=23.75 Aligned_cols=66 Identities=14% Similarity=0.130 Sum_probs=40.5
Q ss_pred cEEEEeccccCCcch-HHHHHHHHHHHHhcCCEEEEeCCChhhhhhhhHHHHHHhcccCcEEEc-----CHHHHHHhhCC
Q 011689 279 NIFIVEGYLFELPDT-IRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWEIVGNYADIVFA-----NSDEARAFCHF 352 (479)
Q Consensus 279 d~v~i~g~~~~~~~~-~~~~~~~l~~ak~~g~~v~~D~~~~~~~~~~~~~~~~~ll~~~Dvl~~-----N~~Ea~~L~g~ 352 (479)
+.|.++|- .|-. .+.+.++++.+++.|..+.+..++. .. .+.++.+++..|.+.+ +.+....+.|.
T Consensus 5 ~~v~~tGG---EPll~~~~~~~l~~~~~~~g~~~~l~TNG~-l~----~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~ 76 (182)
T 3can_A 5 GGVTFCGG---EPLLHPEFLIDILKRCGQQGIHRAVDTTLL-AR----KETVDEVMRNCELLLIDLKSMDSTVHQTFCDV 76 (182)
T ss_dssp CCEEECSS---TGGGSHHHHHHHHHHHHHTTCCEEEECTTC-CC----HHHHHHHHHTCSEEEEECCCSCHHHHHHHHSS
T ss_pred CEEEEEcc---cccCCHHHHHHHHHHHHHCCCcEEEECCCC-CC----HHHHHHHHhhCCEEEEECCCCCHHHHHHHhCC
Confidence 45666652 2222 4555688999999999888887754 21 2334455566787655 45555666664
No 77
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=24.17 E-value=4.2e+02 Score=25.58 Aligned_cols=22 Identities=18% Similarity=-0.003 Sum_probs=19.2
Q ss_pred ceeecCchHHHHHHHHHHhCCC
Q 011689 174 YKAAAGGSLSNSLVALARLGGK 195 (479)
Q Consensus 174 ~~~~~GG~a~NvA~ala~LG~~ 195 (479)
...-.||.|..+|.+|++.|+.
T Consensus 40 livG~GGlG~~ia~~La~~Gvg 61 (346)
T 1y8q_A 40 LLVGLKGLGAEIAKNLILAGVK 61 (346)
T ss_dssp EEECCSHHHHHHHHHHHHHTCS
T ss_pred EEECCCHHHHHHHHHHHHcCCC
Confidence 4567899999999999999984
No 78
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=23.02 E-value=34 Score=19.73 Aligned_cols=12 Identities=42% Similarity=1.010 Sum_probs=8.7
Q ss_pred cccceEEEccCC
Q 011689 55 KGGGFLWVSPSS 66 (479)
Q Consensus 55 ~~~~~~~~~~~~ 66 (479)
...=||||-|.+
T Consensus 9 rsslflwvr~ng 20 (26)
T 2bp3_S 9 RSSLFLWVRPNG 20 (26)
T ss_pred hheEEEEEccCC
Confidence 345699998865
No 79
>1vrm_A Hypothetical protein TM1553; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 1.58A {Thermotoga maritima} SCOP: d.96.2.1
Probab=22.88 E-value=13 Score=36.44 Aligned_cols=15 Identities=53% Similarity=0.634 Sum_probs=2.2
Q ss_pred CcccCCccchhhhhh
Q 011689 22 LYHHHPHRTKLQALV 36 (479)
Q Consensus 22 ~~~~~~~~~~~~~~~ 36 (479)
..|||.||||-+...
T Consensus 6 ~~~~~~~~~~~~~~~ 20 (325)
T 1vrm_A 6 IHHHHHHRTKDQYYE 20 (325)
T ss_dssp -----------CCEE
T ss_pred cccccccccCCccEE
Confidence 468899999977653
No 80
>3ach_A Beta-1,4-endoglucanase; beta-jellyroll, cellulose-binding domain, hydrolase; HET: BGC; 1.40A {Clostridium josui} PDB: 3acf_A* 3acg_A* 3aci_A*
Probab=21.56 E-value=48 Score=29.11 Aligned_cols=51 Identities=29% Similarity=0.487 Sum_probs=35.3
Q ss_pred cccCCccchhhhhhhhhccccccccccccccccccceEEEccCCCCCcceEE
Q 011689 23 YHHHPHRTKLQALVFRKFSLGKERVRGGFMGKKGGGFLWVSPSSSSSSLSVC 74 (479)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (479)
.|||-||.-..+-|- .-.+|+.-.-.-|--..--|+-|-++|.--++|.+-
T Consensus 5 ~~~~~~~~~~e~pv~-hap~G~~tLPS~FED~TRQGWdWd~~SGVk~aLTIe 55 (203)
T 3ach_A 5 HHHHHHRAVVEAPVE-HAPIGKATLPSTFEDSTRQGWAWDATSGVQSALTIK 55 (203)
T ss_dssp ------CCCCCSCCC-CCCCCCCCSSBCCTTSSCTTEEECTTCSCCSCCEEE
T ss_pred cccccceeecccccc-ccCCCCccCCCcccccccccccccCCCCccceeEEe
Confidence 477778876665554 456788888888888888899999999888888764
Done!