Query 011690
Match_columns 479
No_of_seqs 164 out of 2112
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 13:21:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011690.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011690hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3c48_A Predicted glycosyltrans 100.0 1.1E-38 3.9E-43 330.8 44.5 364 22-475 49-427 (438)
2 3okp_A GDP-mannose-dependent a 100.0 3.7E-39 1.3E-43 328.1 39.4 361 1-472 1-378 (394)
3 3fro_A GLGA glycogen synthase; 100.0 4.1E-39 1.4E-43 332.0 37.2 374 21-475 24-432 (439)
4 2r60_A Glycosyl transferase, g 100.0 6.5E-38 2.2E-42 332.2 39.7 371 24-475 42-461 (499)
5 2jjm_A Glycosyl transferase, g 100.0 1.1E-36 3.6E-41 312.4 38.5 357 10-476 21-388 (394)
6 2gek_A Phosphatidylinositol ma 100.0 1.7E-36 5.8E-41 310.1 30.8 357 2-475 18-385 (406)
7 2iw1_A Lipopolysaccharide core 100.0 3.2E-37 1.1E-41 312.1 20.2 327 21-458 20-357 (374)
8 2x6q_A Trehalose-synthase TRET 100.0 1.2E-36 4.1E-41 314.2 20.0 275 100-473 125-414 (416)
9 2qzs_A Glycogen synthase; glyc 100.0 5.8E-35 2E-39 307.8 31.1 298 100-476 128-479 (485)
10 3s28_A Sucrose synthase 1; gly 100.0 7.9E-35 2.7E-39 326.2 33.6 373 26-464 321-761 (816)
11 1rzu_A Glycogen synthase 1; gl 100.0 7.6E-35 2.6E-39 306.9 31.6 295 99-476 128-478 (485)
12 3oy2_A Glycosyltransferase B73 100.0 2.6E-33 8.9E-38 288.6 28.5 269 100-475 80-392 (413)
13 2iuy_A Avigt4, glycosyltransfe 100.0 3E-33 1E-37 281.3 24.6 289 23-475 38-337 (342)
14 3vue_A GBSS-I, granule-bound s 100.0 1.1E-30 3.6E-35 281.9 33.4 295 101-472 153-510 (536)
15 1f0k_A MURG, UDP-N-acetylgluco 100.0 7.6E-30 2.6E-34 258.0 24.7 309 23-462 25-347 (364)
16 2x0d_A WSAF; GT4 family, trans 100.0 4.4E-31 1.5E-35 275.9 13.8 263 100-476 131-412 (413)
17 3beo_A UDP-N-acetylglucosamine 100.0 1E-28 3.5E-33 250.4 22.8 266 100-469 94-369 (375)
18 2hy7_A Glucuronosyltransferase 100.0 3.2E-28 1.1E-32 253.2 20.1 325 5-465 15-370 (406)
19 1vgv_A UDP-N-acetylglucosamine 100.0 7.4E-28 2.5E-32 245.2 19.4 266 100-461 85-365 (384)
20 2vsy_A XCC0866; transferase, g 99.9 7E-27 2.4E-31 251.1 23.4 263 100-477 281-563 (568)
21 3qhp_A Type 1 capsular polysac 99.9 1.6E-25 5.3E-30 202.1 17.3 160 264-461 2-163 (166)
22 3nb0_A Glycogen [starch] synth 99.9 3.7E-24 1.3E-28 232.3 30.3 340 100-475 180-635 (725)
23 1v4v_A UDP-N-acetylglucosamine 99.9 4.2E-25 1.4E-29 224.7 17.8 265 100-469 90-361 (376)
24 2bfw_A GLGA glycogen synthase; 99.9 2.2E-24 7.7E-29 200.1 19.7 151 266-453 38-196 (200)
25 2xci_A KDO-transferase, 3-deox 99.9 7.8E-24 2.7E-28 218.0 20.7 198 165-452 147-359 (374)
26 3rhz_A GTF3, nucleotide sugar 99.9 3.8E-23 1.3E-27 210.7 24.7 259 98-473 71-337 (339)
27 1uqt_A Alpha, alpha-trehalose- 99.9 1.1E-22 3.8E-27 216.5 27.5 159 265-460 256-442 (482)
28 2f9f_A First mannosyl transfer 99.9 1.7E-23 5.9E-28 192.2 15.8 154 258-451 18-176 (177)
29 3t5t_A Putative glycosyltransf 99.8 7.4E-19 2.5E-23 186.7 31.1 274 101-466 149-470 (496)
30 3dzc_A UDP-N-acetylglucosamine 99.8 7.9E-20 2.7E-24 189.6 20.5 255 100-452 110-381 (396)
31 3ot5_A UDP-N-acetylglucosamine 99.8 4E-19 1.4E-23 184.9 22.8 251 100-452 113-375 (403)
32 3otg_A CALG1; calicheamicin, T 99.8 4.6E-19 1.6E-23 182.0 23.0 339 5-460 21-398 (412)
33 3s2u_A UDP-N-acetylglucosamine 99.8 4.2E-18 1.4E-22 174.6 25.9 312 16-453 10-339 (365)
34 2iyf_A OLED, oleandomycin glyc 99.8 2.2E-16 7.4E-21 163.5 30.0 143 261-453 230-382 (430)
35 4fzr_A SSFS6; structural genom 99.7 1.5E-16 5.2E-21 163.2 19.4 148 261-460 225-390 (398)
36 3ia7_A CALG4; glycosysltransfe 99.7 2.8E-15 9.7E-20 152.8 26.0 145 261-456 229-384 (402)
37 3tsa_A SPNG, NDP-rhamnosyltran 99.7 3.6E-16 1.2E-20 159.7 18.3 149 261-458 216-376 (391)
38 3oti_A CALG3; calicheamicin, T 99.7 2.6E-15 9E-20 154.1 20.5 151 260-460 229-387 (398)
39 3rsc_A CALG2; TDP, enediyne, s 99.6 4.6E-14 1.6E-18 145.2 26.3 110 323-453 277-396 (415)
40 2p6p_A Glycosyl transferase; X 99.6 6.7E-13 2.3E-17 135.2 25.6 140 261-453 208-362 (384)
41 4hwg_A UDP-N-acetylglucosamine 99.5 1.4E-13 4.8E-18 142.3 16.6 235 100-434 93-342 (385)
42 2iya_A OLEI, oleandomycin glyc 99.5 2.9E-11 9.7E-16 125.0 29.9 141 261-452 253-403 (424)
43 3q3e_A HMW1C-like glycosyltran 99.4 6.9E-11 2.4E-15 127.9 28.3 180 257-475 433-629 (631)
44 2yjn_A ERYCIII, glycosyltransf 99.4 1.4E-11 4.7E-16 128.4 21.1 140 261-453 265-418 (441)
45 1iir_A Glycosyltransferase GTF 99.3 1E-09 3.4E-14 113.4 27.3 135 262-452 237-382 (415)
46 3h4t_A Glycosyltransferase GTF 99.3 1.4E-09 4.8E-14 112.2 26.4 138 261-453 219-366 (404)
47 4amg_A Snogd; transferase, pol 99.2 1.7E-10 5.9E-15 117.5 14.2 143 260-452 234-382 (400)
48 1rrv_A Glycosyltransferase GTF 99.1 1.9E-08 6.4E-13 103.7 26.8 134 263-452 237-383 (416)
49 2o6l_A UDP-glucuronosyltransfe 99.1 5.3E-10 1.8E-14 101.0 10.6 131 261-445 19-161 (170)
50 2c1x_A UDP-glucose flavonoid 3 98.5 0.0001 3.5E-09 77.3 28.7 112 347-475 325-452 (456)
51 3hbf_A Flavonoid 3-O-glucosylt 98.4 7.8E-05 2.7E-09 78.4 26.3 93 347-453 327-428 (454)
52 1l5w_A Maltodextrin phosphoryl 98.4 2.3E-06 8E-11 94.6 15.0 184 260-474 523-731 (796)
53 2pq6_A UDP-glucuronosyl/UDP-gl 98.3 0.00029 9.8E-09 74.3 28.5 93 347-453 353-453 (482)
54 2c4m_A Glycogen phosphorylase; 98.3 9E-06 3.1E-10 89.9 17.1 137 260-419 513-667 (796)
55 4gyw_A UDP-N-acetylglucosamine 98.3 8.8E-06 3E-10 90.5 17.2 181 253-472 513-708 (723)
56 2acv_A Triterpene UDP-glucosyl 98.3 0.0029 9.8E-08 66.3 35.2 76 347-433 332-424 (463)
57 2vch_A Hydroquinone glucosyltr 98.1 0.0021 7.2E-08 67.7 29.4 90 349-452 341-442 (480)
58 3tov_A Glycosyl transferase fa 98.1 0.00051 1.7E-08 69.4 22.5 111 259-407 181-293 (349)
59 1psw_A ADP-heptose LPS heptosy 98.0 0.00011 3.8E-09 73.2 15.7 105 259-401 176-287 (348)
60 3hbm_A UDP-sugar hydrolase; PS 97.9 0.0016 5.6E-08 64.0 21.6 67 324-403 186-253 (282)
61 2gj4_A Glycogen phosphorylase, 97.8 0.00023 7.9E-09 79.1 15.3 183 260-474 547-755 (824)
62 3l7i_A Teichoic acid biosynthe 97.0 0.018 6.1E-07 63.7 18.5 68 358-433 606-682 (729)
63 2jzc_A UDP-N-acetylglucosamine 96.7 0.0024 8.1E-08 60.8 6.5 73 348-431 115-196 (224)
64 2gt1_A Lipopolysaccharide hept 94.7 0.092 3.2E-06 51.5 9.0 133 262-433 177-321 (326)
65 1ygp_A Yeast glycogen phosphor 92.6 1.1 3.9E-05 49.8 13.6 143 264-424 600-766 (879)
66 2k6g_A Replication factor C su 61.1 29 0.001 28.5 7.6 66 318-400 31-98 (109)
67 1fy2_A Aspartyl dipeptidase; s 59.5 15 0.0005 34.2 6.2 79 323-405 32-124 (229)
68 3kcq_A Phosphoribosylglycinami 55.7 20 0.0007 33.2 6.4 84 1-109 5-90 (215)
69 2ixd_A LMBE-related protein; h 55.2 17 0.00059 34.2 5.9 19 25-44 24-42 (242)
70 1rcu_A Conserved hypothetical 54.8 11 0.00038 34.5 4.3 67 359-430 110-191 (195)
71 4fyk_A Deoxyribonucleoside 5'- 51.4 1E+02 0.0034 26.9 9.8 70 362-433 63-141 (152)
72 4g65_A TRK system potassium up 49.5 2.3E+02 0.0078 28.9 19.6 107 323-433 236-366 (461)
73 3en0_A Cyanophycinase; serine 48.1 81 0.0028 30.5 9.6 84 322-405 56-156 (291)
74 3ehd_A Uncharacterized conserv 47.7 31 0.001 30.6 5.9 68 363-432 65-161 (162)
75 3av3_A Phosphoribosylglycinami 46.4 40 0.0014 31.0 6.8 57 3-62 2-60 (212)
76 2ebu_A Replication factor C su 45.2 36 0.0012 28.2 5.6 74 311-401 14-89 (112)
77 3rys_A Adenosine deaminase 1; 45.1 40 0.0014 33.4 7.0 114 323-452 196-317 (343)
78 1jg7_A BGT, DNA beta-glucosylt 43.7 2.1E+02 0.0072 26.8 11.6 110 348-464 231-347 (351)
79 4dzz_A Plasmid partitioning pr 42.6 52 0.0018 28.8 6.8 71 20-116 18-90 (206)
80 3llv_A Exopolyphosphatase-rela 42.5 97 0.0033 25.3 8.2 115 23-189 20-134 (141)
81 4f3y_A DHPR, dihydrodipicolina 41.9 26 0.00087 33.7 4.8 78 323-406 8-109 (272)
82 3mm4_A Histidine kinase homolo 41.4 1.3E+02 0.0045 26.4 9.5 109 321-434 60-196 (206)
83 1u2p_A Ptpase, low molecular w 39.5 22 0.00076 31.1 3.7 41 1-41 1-43 (163)
84 3l4e_A Uncharacterized peptida 39.5 22 0.00077 32.5 3.9 69 335-404 47-123 (206)
85 2iz6_A Molybdenum cofactor car 38.6 17 0.00057 32.7 2.7 66 363-433 103-173 (176)
86 3nrb_A Formyltetrahydrofolate 38.6 2E+02 0.0067 27.6 10.6 57 3-62 87-144 (287)
87 3kb6_A D-lactate dehydrogenase 38.3 82 0.0028 31.0 8.0 82 322-405 141-234 (334)
88 1q74_A 1D-MYO-inosityl 2-aceta 38.3 1E+02 0.0035 29.7 8.6 42 1-44 1-43 (303)
89 3obi_A Formyltetrahydrofolate 37.7 1.8E+02 0.0061 28.0 10.2 57 3-62 88-145 (288)
90 2qsj_A DNA-binding response re 37.5 1.4E+02 0.0046 24.3 8.4 108 322-434 3-124 (154)
91 4ds3_A Phosphoribosylglycinami 36.9 73 0.0025 29.3 6.9 58 1-62 5-64 (209)
92 3auf_A Glycinamide ribonucleot 36.7 95 0.0033 28.8 7.8 57 3-62 21-79 (229)
93 3kht_A Response regulator; PSI 36.0 1.7E+02 0.0057 23.4 10.1 107 322-433 5-127 (144)
94 3i6i_A Putative leucoanthocyan 35.8 1.7E+02 0.0059 27.8 9.9 43 19-62 20-68 (346)
95 1i1q_B Anthranilate synthase c 35.4 1.4E+02 0.0048 26.2 8.5 75 325-400 3-82 (192)
96 3to5_A CHEY homolog; alpha(5)b 34.8 2E+02 0.0067 23.9 9.6 108 321-433 11-132 (134)
97 3ijp_A DHPR, dihydrodipicolina 34.2 31 0.001 33.5 4.0 78 322-405 21-123 (288)
98 3grc_A Sensor protein, kinase; 33.4 1.8E+02 0.0061 23.0 10.5 106 323-434 7-127 (140)
99 3fwz_A Inner membrane protein 32.7 1.9E+02 0.0064 23.8 8.5 115 23-189 21-136 (140)
100 1vl6_A Malate oxidoreductase; 32.1 90 0.0031 31.6 7.2 78 319-400 189-292 (388)
101 2ywr_A Phosphoribosylglycinami 32.1 93 0.0032 28.5 6.8 54 5-62 2-58 (216)
102 2pln_A HP1043, response regula 31.4 1.9E+02 0.0066 22.8 8.8 105 320-434 16-133 (137)
103 3da8_A Probable 5'-phosphoribo 31.4 64 0.0022 29.8 5.6 56 4-62 12-67 (215)
104 2nzw_A Alpha1,3-fucosyltransfe 31.4 2.7E+02 0.0093 27.8 10.6 99 340-446 198-308 (371)
105 1p9l_A Dihydrodipicolinate red 31.1 1E+02 0.0036 28.8 7.1 75 324-404 2-79 (245)
106 3q9l_A Septum site-determining 30.9 2.9E+02 0.01 24.7 11.1 23 20-43 19-41 (260)
107 1meo_A Phosophoribosylglycinam 30.2 1.5E+02 0.0051 27.0 7.8 54 6-62 2-57 (209)
108 3lou_A Formyltetrahydrofolate 29.9 2.1E+02 0.0073 27.5 9.3 56 3-62 94-150 (292)
109 3n0v_A Formyltetrahydrofolate 29.9 1.9E+02 0.0064 27.8 8.8 56 3-62 89-145 (286)
110 3zqu_A Probable aromatic acid 29.6 47 0.0016 30.6 4.3 40 1-42 1-40 (209)
111 3h1g_A Chemotaxis protein CHEY 29.6 2E+02 0.0069 22.5 10.3 107 322-433 5-126 (129)
112 3p9x_A Phosphoribosylglycinami 29.6 1.3E+02 0.0043 27.7 7.2 56 4-62 2-59 (211)
113 2vxb_A DNA repair protein RHP9 29.4 47 0.0016 31.1 4.3 26 320-345 3-32 (241)
114 3ty2_A 5'-nucleotidase SURE; s 28.1 63 0.0021 30.9 4.9 57 4-62 9-68 (261)
115 3o1l_A Formyltetrahydrofolate 28.0 2.9E+02 0.0098 26.7 9.8 85 3-109 104-189 (302)
116 3bfv_A CAPA1, CAPB2, membrane 27.9 2.4E+02 0.0084 26.3 9.3 24 18-42 97-120 (271)
117 2zay_A Response regulator rece 27.9 2.3E+02 0.0078 22.5 10.7 108 321-434 7-128 (147)
118 1jkx_A GART;, phosphoribosylgl 27.7 1.3E+02 0.0044 27.5 7.0 54 6-62 2-57 (212)
119 4e7p_A Response regulator; DNA 27.7 2.4E+02 0.0082 22.7 9.8 108 322-434 20-140 (150)
120 3vot_A L-amino acid ligase, BL 27.6 3.3E+02 0.011 26.8 10.8 38 1-44 1-39 (425)
121 2cwd_A Low molecular weight ph 27.5 41 0.0014 29.4 3.3 41 1-41 1-43 (161)
122 3hzh_A Chemotaxis response reg 27.5 2.5E+02 0.0086 22.9 8.7 107 322-433 36-156 (157)
123 3tqr_A Phosphoribosylglycinami 27.1 1.6E+02 0.0054 27.1 7.4 55 5-62 6-61 (215)
124 3glr_A NAD-dependent deacetyla 26.9 1.5E+02 0.005 28.6 7.4 96 347-448 175-275 (285)
125 3la6_A Tyrosine-protein kinase 26.6 1.5E+02 0.0052 28.1 7.6 25 18-43 107-131 (286)
126 3tpc_A Short chain alcohol deh 26.5 3.6E+02 0.012 24.3 10.3 26 18-44 16-42 (257)
127 1q1a_A HST2 protein; ternary c 26.4 1.8E+02 0.0062 27.8 8.1 85 347-433 175-278 (289)
128 3gvp_A Adenosylhomocysteinase 26.4 1.2E+02 0.0042 31.0 7.1 81 320-404 218-310 (435)
129 4dad_A Putative pilus assembly 26.0 1.4E+02 0.0047 24.0 6.3 110 320-434 18-141 (146)
130 4dgs_A Dehydrogenase; structur 25.6 1.5E+02 0.0053 29.1 7.5 83 321-404 170-261 (340)
131 2yq5_A D-isomer specific 2-hyd 25.1 2.2E+02 0.0076 27.9 8.6 82 322-404 148-239 (343)
132 1k68_A Phytochrome response re 24.9 2.4E+02 0.0083 21.8 10.4 106 323-433 3-130 (140)
133 4had_A Probable oxidoreductase 24.4 3E+02 0.01 26.3 9.4 70 320-401 46-117 (350)
134 1uan_A Hypothetical protein TT 23.9 2.3E+02 0.008 25.8 8.1 19 25-44 22-40 (227)
135 3l4b_C TRKA K+ channel protien 23.8 88 0.003 28.0 5.0 34 100-133 64-97 (218)
136 2ehd_A Oxidoreductase, oxidore 23.7 1.3E+02 0.0045 26.7 6.3 37 1-42 1-38 (234)
137 3cnb_A DNA-binding response re 23.7 2.6E+02 0.009 21.8 10.8 108 322-434 8-130 (143)
138 3cio_A ETK, tyrosine-protein k 23.5 2.2E+02 0.0074 27.1 8.1 27 16-43 117-143 (299)
139 3heb_A Response regulator rece 23.5 2.9E+02 0.0098 22.2 9.9 106 323-433 5-134 (152)
140 3eul_A Possible nitrate/nitrit 23.1 2.9E+02 0.01 22.1 9.7 110 320-434 13-135 (152)
141 3enk_A UDP-glucose 4-epimerase 23.0 2.8E+02 0.0095 26.0 8.8 26 17-43 13-39 (341)
142 3pp8_A Glyoxylate/hydroxypyruv 22.9 90 0.0031 30.4 5.2 82 322-404 139-232 (315)
143 2wqk_A 5'-nucleotidase SURE; S 22.8 2.1E+02 0.0071 26.9 7.6 50 11-62 6-58 (251)
144 1xdw_A NAD+-dependent (R)-2-hy 22.7 1.8E+02 0.0063 28.2 7.5 83 321-404 145-237 (331)
145 3rof_A Low molecular weight pr 22.7 71 0.0024 27.9 4.0 37 4-40 6-43 (158)
146 3cg4_A Response regulator rece 22.4 2.8E+02 0.0097 21.7 11.0 106 322-433 7-126 (142)
147 1d1q_A Tyrosine phosphatase (E 22.2 74 0.0025 27.6 4.0 38 4-41 7-47 (161)
148 4etm_A LMPTP, low molecular we 22.1 73 0.0025 28.2 4.0 39 3-41 17-57 (173)
149 2zki_A 199AA long hypothetical 22.0 59 0.002 28.5 3.4 42 1-44 1-43 (199)
150 3n8i_A Low molecular weight ph 22.0 72 0.0025 27.7 3.9 39 3-41 4-44 (157)
151 3gvx_A Glycerate dehydrogenase 21.8 2E+02 0.0067 27.6 7.3 83 321-404 121-212 (290)
152 2khz_A C-MYC-responsive protei 21.7 1.4E+02 0.0048 26.0 5.7 69 363-434 73-151 (165)
153 1l7b_A DNA ligase; BRCT, autos 21.7 71 0.0024 25.3 3.4 64 320-401 8-72 (92)
154 1jbe_A Chemotaxis protein CHEY 21.6 2.8E+02 0.0095 21.3 10.6 106 323-433 5-124 (128)
155 3pnx_A Putative sulfurtransfer 21.6 41 0.0014 29.7 2.1 42 1-43 2-43 (160)
156 3p2y_A Alanine dehydrogenase/p 21.6 3.7E+02 0.013 26.8 9.5 85 321-407 183-310 (381)
157 4gxw_A Adenosine deaminase; am 21.5 4.8E+02 0.016 25.9 10.4 113 322-452 210-338 (380)
158 3n58_A Adenosylhomocysteinase; 21.5 1.9E+02 0.0065 29.9 7.4 82 320-404 245-337 (464)
159 3jvi_A Protein tyrosine phosph 21.4 72 0.0025 27.8 3.7 38 3-40 3-42 (161)
160 1id1_A Putative potassium chan 21.4 3.4E+02 0.012 22.3 11.2 38 100-137 70-108 (153)
161 2x5n_A SPRPN10, 26S proteasome 21.2 1.5E+02 0.0052 26.3 6.0 57 5-62 107-171 (192)
162 3mc3_A DSRE/DSRF-like family p 21.2 55 0.0019 27.5 2.8 40 4-44 15-57 (134)
163 3jtm_A Formate dehydrogenase, 21.2 2E+02 0.0067 28.4 7.3 83 321-405 163-260 (351)
164 3dm5_A SRP54, signal recogniti 21.1 2.6E+02 0.0089 28.6 8.4 33 10-44 104-139 (443)
165 2f62_A Nucleoside 2-deoxyribos 20.9 2.2E+02 0.0076 24.8 6.8 39 362-401 62-105 (161)
166 3geb_A EYES absent homolog 2; 20.6 83 0.0028 30.0 4.1 44 320-370 228-271 (274)
167 4egs_A Ribose 5-phosphate isom 20.5 70 0.0024 28.5 3.5 37 5-41 35-71 (180)
168 3dhn_A NAD-dependent epimerase 20.2 1.1E+02 0.0038 27.0 4.9 53 1-62 1-54 (227)
169 4g2n_A D-isomer specific 2-hyd 20.0 2E+02 0.0067 28.4 7.0 83 321-404 172-266 (345)
No 1
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.1e-38 Score=330.75 Aligned_cols=364 Identities=17% Similarity=0.158 Sum_probs=256.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011690 22 QYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (479)
Q Consensus 22 ~~~a~~La~~~G~eV~Vv~~~~~~~~~~-~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~ 100 (479)
...+..|+++ ||+|+|++......... ....+++++++++...............+. .+...+ +...+.+..
T Consensus 49 ~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~ 121 (438)
T 3c48_A 49 LSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLA---AFTGGM---LSFTRREKV 121 (438)
T ss_dssp HHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCCGGGGGGGHH---HHHHHH---HHHHHHHTC
T ss_pred HHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccchhHHHHHHH---HHHHHH---HHHHHhccC
Confidence 3445666664 99999999775422111 122478999999832111110111111111 111111 111122223
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchh-HHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
+||+||+|. .....++.++++..++|+|+++|+..... .......... .....+ .++.+.+.+|.++++|
T Consensus 122 ~~Div~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~ii~~s 192 (438)
T 3c48_A 122 TYDLIHSHY---WLSGQVGWLLRDLWRIPLIHTAHTLAAVK-NSYRDDSDTPESEARRI-----CEQQLVDNADVLAVNT 192 (438)
T ss_dssp CCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSSCHHHH-SCC----CCHHHHHHHH-----HHHHHHHHCSEEEESS
T ss_pred CCCEEEeCC---ccHHHHHHHHHHHcCCCEEEEecCCcccc-cccccccCCcchHHHHH-----HHHHHHhcCCEEEEcC
Confidence 599999998 33444555566777999999999975211 0000000111 111222 3778888999999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
+.+++.+.+.+|.+ +.+|||+ +.+.|.+.+...+..+..+
T Consensus 193 ~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~------------------------------------ 236 (438)
T 3c48_A 193 QEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRE------------------------------------ 236 (438)
T ss_dssp HHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHH------------------------------------
T ss_pred HHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHh------------------------------------
Confidence 99999998877864 8999999 7777776543222222222
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC--CEEEEEEec---
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGK--- 330 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~l~IvG~--- 330 (479)
+++++++ .+++++|++.+.||++.+++|+..+.++ +| +++|+|+|+
T Consensus 237 -~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~p~~~~~l~i~G~~~~ 287 (438)
T 3c48_A 237 -LGIPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDR---------------------------DPDRNLRVIICGGPSG 287 (438)
T ss_dssp -TTCCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHH---------------------------CTTCSEEEEEECCBC-
T ss_pred -cCCCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCCCC
Confidence 2343444 4899999999999999999999999876 66 899999998
Q ss_pred -CCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhc
Q 011690 331 -GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 408 (479)
Q Consensus 331 -G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~ 408 (479)
|+..+.+++.++++++ ++|.|+|. ++.+++..+|++||++|+| |..|++|++++|||+||+|||+++.++.+|+
T Consensus 288 ~g~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~ 363 (438)
T 3c48_A 288 PNATPDTYRHMAEELGVEKRIRFLDP-RPPSELVAVYRAADIVAVP---SFNESFGLVAMEAQASGTPVIAARVGGLPIA 363 (438)
T ss_dssp -----CHHHHHHHHTTCTTTEEEECC-CCHHHHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHTTCCEEEESCTTHHHH
T ss_pred CCcHHHHHHHHHHHcCCCCcEEEcCC-CChHHHHHHHHhCCEEEEC---ccccCCchHHHHHHHcCCCEEecCCCChhHH
Confidence 8889999999999998 78999997 9999999999999999998 5678999999999999999999999999999
Q ss_pred cccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHh
Q 011690 409 VKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 409 i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
+.++.+|++++ |+++++++|.++++ +++.++.+++++++....++|+..-++ +..+++++++
T Consensus 364 i~~~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~ 427 (438)
T 3c48_A 364 VAEGETGLLVDGHSPHAWADALATLLD----DDETRIRMGEDAVEHARTFSWAATAAQ-LSSLYNDAIA 427 (438)
T ss_dssp SCBTTTEEEESSCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred hhCCCcEEECCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHhh
Confidence 99999999994 79999999999999 589999999999886655777665543 4556666654
No 2
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=3.7e-39 Score=328.08 Aligned_cols=361 Identities=15% Similarity=0.126 Sum_probs=270.3
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCc-ccccCCCCeEEEEeecCCCCCCCCCchhHHH
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~-~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~ 78 (479)
|++++++++++.......+|+...+..+++. .||+|+|++....... .......++++++++. ... + ......
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~ 75 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPR--SVM--L-PTPTTA 75 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEESS--SSC--C-SCHHHH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEccc--ccc--c-cchhhH
Confidence 6677777777754333457888888888887 5999999998765331 2333467899999982 211 1 122334
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCc-EEEEecCchhhhhhhhcCCCchhHHHHH
Q 011690 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (479)
Q Consensus 79 ~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~-~ii~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (479)
..+.+.+.+ .+||+||++.+... ..++.++ +..++| +|+++|+..... ......+
T Consensus 76 ~~l~~~~~~------------~~~Dvv~~~~~~~~--~~~~~~~-~~~~~~~~i~~~h~~~~~~---------~~~~~~~ 131 (394)
T 3okp_A 76 HAMAEIIRE------------REIDNVWFGAAAPL--ALMAGTA-KQAGASKVIASTHGHEVGW---------SMLPGSR 131 (394)
T ss_dssp HHHHHHHHH------------TTCSEEEESSCTTG--GGGHHHH-HHTTCSEEEEECCSTHHHH---------TTSHHHH
T ss_pred HHHHHHHHh------------cCCCEEEECCcchH--HHHHHHH-HhcCCCcEEEEeccchhhh---------hhcchhh
Confidence 444444444 79999999985433 2333333 445666 777999865211 0112223
Q ss_pred HHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccc
Q 011690 158 CFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 234 (479)
Q Consensus 158 ~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (479)
.. ++.+.+.+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.....+..+..++
T Consensus 132 ~~-----~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~-------------- 192 (394)
T 3okp_A 132 QS-----LRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKL-------------- 192 (394)
T ss_dssp HH-----HHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHT--------------
T ss_pred HH-----HHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhc--------------
Confidence 33 5667788999999999999999998766 48999999 77888875544545543332
Q ss_pred cccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhcc
Q 011690 235 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 314 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (479)
+++++.+ +++++|++.+.||++.+++|+..+.++
T Consensus 193 -----------------------~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------- 226 (394)
T 3okp_A 193 -----------------------GFTDTTP-VIACNSRLVPRKGQDSLIKAMPQVIAA---------------------- 226 (394)
T ss_dssp -----------------------TCCTTCC-EEEEESCSCGGGCHHHHHHHHHHHHHH----------------------
T ss_pred -----------------------CCCcCce-EEEEEeccccccCHHHHHHHHHHHHhh----------------------
Confidence 3444444 899999999999999999999999886
Q ss_pred CcccCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCC-------CCCcHH
Q 011690 315 GKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-------LDLPMK 386 (479)
Q Consensus 315 ~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~-------e~~p~~ 386 (479)
.|+++|+|+|+|+..+.+++.+ .++ ++|.|+|. ++.+++..+|++||++|+| |.. |++|++
T Consensus 227 -----~~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~p---s~~~~~~~~~e~~~~~ 295 (394)
T 3okp_A 227 -----RPDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGR-LEYQDMINTLAAADIFAMP---ARTRGGGLDVEGLGIV 295 (394)
T ss_dssp -----STTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEES-CCHHHHHHHHHHCSEEEEC---CCCBGGGTBCCSSCHH
T ss_pred -----CCCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCC-CCHHHHHHHHHhCCEEEec---CccccccccccccCcH
Confidence 8899999999999999999888 556 78999997 9999999999999999999 444 999999
Q ss_pred HHHHHhCCCcEEEecCccchhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhh-hhchHHHHH
Q 011690 387 VVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATEWE 463 (479)
Q Consensus 387 llEama~G~PVIas~~~~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~ 463 (479)
++|||+||+|||+++.++..|++.++ +|++++ |+++++++|.++++ +++.++++++++++... .++|+..-+
T Consensus 296 ~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~ 370 (394)
T 3okp_A 296 YLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLD----DPIRRAAMGAAGRAHVEAEWSWEIMGE 370 (394)
T ss_dssp HHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHHTBHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999 999994 89999999999999 69999999999988543 467765544
Q ss_pred HHHHHHHHH
Q 011690 464 EHAKPLITE 472 (479)
Q Consensus 464 ~~~~~~~~~ 472 (479)
+ +..++++
T Consensus 371 ~-~~~~~~~ 378 (394)
T 3okp_A 371 R-LTNILQS 378 (394)
T ss_dssp H-HHHHHHS
T ss_pred H-HHHHHHH
Confidence 3 3444443
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=4.1e-39 Score=331.98 Aligned_cols=374 Identities=16% Similarity=0.125 Sum_probs=262.6
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCcccc-----------------cCCCCeEEEEeecCCCCCCCCCc-hhHH-HHHH
Q 011690 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQWPTIPRGLPK-VLKP-VLLL 81 (479)
Q Consensus 21 ~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~-----------------~~~~gi~i~~~~~~~~~~~~~~~-~~~~-~~~l 81 (479)
+...+..|+++ ||+|+|+|+......... ...+|+++++++........... .... ...+
T Consensus 24 ~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (439)
T 3fro_A 24 LTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKA 102 (439)
T ss_dssp HHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEESGGGGCSSTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecchhccccccccCCcchhhhhh
Confidence 44456777775 999999997654332110 04579999999831111111111 1111 2222
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhH
Q 011690 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV 161 (479)
Q Consensus 82 ~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (479)
..+...+..++..++.+..+||+||+|+ .....++.++++..++|+|++.|+...............+.+. ..+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~Dii~~~~---~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~ 178 (439)
T 3fro_A 103 VTFGRASVLLLNDLLREEPLPDVVHFHD---WHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-APYPD 178 (439)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCSEEEEES---GGGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGG-CCSSE
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEecc---hhhhhhHHHHhhccCCCEEEEecccccccCchHHhCccccccc-cccce
Confidence 2233333333444333347999999998 4455566667778899999999987521000000000000000 00001
Q ss_pred HHHHHHHhhcCCEEEEeCHHHHHHHHHhh---CCeEEEecCC-CCCCCCCCC-----hHHHHHHHHhhhhcccCCCCccc
Q 011690 162 LRIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPTS-----LEEKHELFCRLNKILHQPLGVQD 232 (479)
Q Consensus 162 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~-~~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 232 (479)
...++...+.||.++++|+.+++.....+ ..++.+|||| +.+.|.|.. ...+..+..+
T Consensus 179 ~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~------------- 245 (439)
T 3fro_A 179 IDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSK------------- 245 (439)
T ss_dssp ECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHH-------------
T ss_pred eeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHH-------------
Confidence 13377778899999999999998865533 3449999999 778887652 2223333333
Q ss_pred cccccccCCcccccchhccccccccccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhh
Q 011690 233 CVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 311 (479)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~ 311 (479)
++++++ .+++++|++. +.||++.+++|++.+.++
T Consensus 246 ------------------------~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~------------------- 280 (439)
T 3fro_A 246 ------------------------FGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSK------------------- 280 (439)
T ss_dssp ------------------------HTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTS-------------------
T ss_pred ------------------------cCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhc-------------------
Confidence 234444 5899999999 999999999999998763
Q ss_pred hccCcccCC--CCEEEEEEecCCCh--HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHH
Q 011690 312 ISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 387 (479)
Q Consensus 312 ~~~~~~~~~--p~~~l~IvG~G~~~--~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~l 387 (479)
. |+++|+|+|+|+.. +.+++.+++++ +.+.|.|. ++.+++..+|++||++|+| |..|++|+++
T Consensus 281 --------~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~ 347 (439)
T 3fro_A 281 --------KEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGLVA 347 (439)
T ss_dssp --------GGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSC-CCHHHHHHHHTTCSEEEEC---BSCCSSCHHH
T ss_pred --------ccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCC-CCHHHHHHHHHHCCEEEeC---CCCCCccHHH
Confidence 4 89999999999977 88999999988 77889995 9999999999999999999 5568999999
Q ss_pred HHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 011690 388 VDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH 465 (479)
Q Consensus 388 lEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 465 (479)
+|||+||+|||+|+.++.+|+++++ +|+++ .|+++++++|.++++. +++.++.+++++++....++|+...++
T Consensus 348 ~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~- 422 (439)
T 3fro_A 348 LEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRAMSFSWEKSAER- 422 (439)
T ss_dssp HHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHTSCHHHHHHH-
T ss_pred HHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHhhCcHHHHHHH-
Confidence 9999999999999999999999887 99999 4799999999999994 367788898888886667888776654
Q ss_pred HHHHHHHHHh
Q 011690 466 AKPLITEVIS 475 (479)
Q Consensus 466 ~~~~~~~~~~ 475 (479)
...+++++++
T Consensus 423 ~~~~~~~~~~ 432 (439)
T 3fro_A 423 YVKAYTGSID 432 (439)
T ss_dssp HHHHHHTCSC
T ss_pred HHHHHHHHHH
Confidence 4556665544
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=6.5e-38 Score=332.24 Aligned_cols=371 Identities=15% Similarity=0.127 Sum_probs=259.5
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCc-cc----cc---CCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011690 24 QALSLARQMSLEVDVVAYGGSKPH-AA----IL---EHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL 95 (479)
Q Consensus 24 ~a~~La~~~G~eV~Vv~~~~~~~~-~~----~~---~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l 95 (479)
.+..|++ .||+|+|+|....... .. .. ...|+++++++. .+....... .....+..++.. +..+
T Consensus 42 la~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~--~~~~~~~~~-~~~~~~~~~~~~----l~~~ 113 (499)
T 2r60_A 42 VSLALAE-MGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPF--GGDKFLPKE-ELWPYLHEYVNK----IINF 113 (499)
T ss_dssp HHHHHHH-TTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECC--SCSSCCCGG-GCGGGHHHHHHH----HHHH
T ss_pred HHHHHHh-cCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecC--CCcCCcCHH-HHHHHHHHHHHH----HHHH
Confidence 3555555 4999999997654211 11 11 147999999983 221111110 000111111111 1122
Q ss_pred Hhhc-CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCC----chhHHHHHHHhHHHHHHHHhh
Q 011690 96 CVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVSIYRCFSVLRIEKYYGK 170 (479)
Q Consensus 96 ~~~~-~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~e~~~~~ 170 (479)
+.+. .+||+||+|+ .....++.++++..++|+|++.|+..+.... ..... ..+.+.+++.....+++.+.+
T Consensus 114 l~~~~~~~Divh~~~---~~~~~~~~~~~~~~~~p~v~~~H~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (499)
T 2r60_A 114 YREEGKFPQVVTTHY---GDGGLAGVLLKNIKGLPFTFTGHSLGAQKME-KLNVNTSNFKEMDERFKFHRRIIAERLTMS 189 (499)
T ss_dssp HHHHTCCCSEEEEEH---HHHHHHHHHHHHHHCCCEEEECSSCHHHHHH-TTCCCSTTSHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEcC---CcchHHHHHHHHhcCCcEEEEccCcccccch-hhccCCCCcchhhhhHHHHHHHHHHHHHHh
Confidence 2222 4899999998 3344555566777899999999997532211 01000 011111111112234788889
Q ss_pred cCCEEEEeCHHHHHHHHHh--hC-C-------eEEEecCC-CCCCCCCCCh-HHHHHHHHhhhhcccCCCCccccccccc
Q 011690 171 MANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNAG 238 (479)
Q Consensus 171 ~ad~vi~vS~~~~~~l~~~--~~-~-------~~~vi~n~-~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (479)
.||.++++|+.+++.+.+. +| + ++.+|||| +.+.|.+... ..+..+..+++...
T Consensus 190 ~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~-------------- 255 (499)
T 2r60_A 190 YADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDL-------------- 255 (499)
T ss_dssp HCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHS--------------
T ss_pred cCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccc--------------
Confidence 9999999999999998877 77 4 39999999 7777877642 22233333322000
Q ss_pred cCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCccc
Q 011690 239 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (479)
..+.++++ +|+++||+.+.||++.+++|++.+.++
T Consensus 256 ------------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~-------------------------- 290 (499)
T 2r60_A 256 ------------------GSERMELP-AIIASSRLDQKKNHYGLVEAYVQNKEL-------------------------- 290 (499)
T ss_dssp ------------------CGGGTTSC-EEEECSCCCGGGCHHHHHHHHHTCHHH--------------------------
T ss_pred ------------------cccCCCCc-EEEEeecCccccCHHHHHHHHHHHHHh--------------------------
Confidence 00233444 899999999999999999999998764
Q ss_pred CCCC-EEEEEEec--CC------C-------hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcC----CEEEEcccC
Q 011690 319 LYPR-LLFIITGK--GP------D-------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTS 377 (479)
Q Consensus 319 ~~p~-~~l~IvG~--G~------~-------~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~a----di~v~p~~~ 377 (479)
.|+ ++|+|+|+ |+ . .+.+++.++++++ ++|.|+|. ++.+++..+|++| |++|+|
T Consensus 291 -~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~-v~~~~~~~~~~~a~~~~dv~v~p--- 365 (499)
T 2r60_A 291 -QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL-NSQQELAGCYAYLASKGSVFALT--- 365 (499)
T ss_dssp -HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEEC-CSHHHHHHHHHHHHHTTCEEEEC---
T ss_pred -CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCC-CCHHHHHHHHHhcCcCCCEEEEC---
Confidence 344 68999998 44 2 7889999999999 78999997 9999999999999 999999
Q ss_pred CCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhh
Q 011690 378 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS 455 (479)
Q Consensus 378 s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
|..|+||++++|||+||+|||+|+.++.+|++.++.+|+++ .|+++|+++|.++++ +++.++.+++++++....
T Consensus 366 S~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 366 SFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE----SEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp CSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999999999999999999999999 479999999999999 689999999999886544
Q ss_pred -hchHHHHHHHHHHHHHHHHh
Q 011690 456 -ARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 456 -~~w~~~~~~~~~~~~~~~~~ 475 (479)
++|+...++ +..+++++++
T Consensus 442 ~fs~~~~~~~-~~~~y~~~~~ 461 (499)
T 2r60_A 442 RYTWQETARG-YLEVIQEIAD 461 (499)
T ss_dssp HSBHHHHHHH-HHHHHHHHHH
T ss_pred hCCHHHHHHH-HHHHHHHHHh
Confidence 888776654 5556666654
No 5
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=1.1e-36 Score=312.40 Aligned_cols=357 Identities=15% Similarity=0.191 Sum_probs=252.6
Q ss_pred EEecCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCC-chhHHHHHHHHHHHH
Q 011690 10 VVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLP-KVLKPVLLLLKPLIQ 87 (479)
Q Consensus 10 ~~~~~~g~~~r~-~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~ 87 (479)
..+++.|+.++. ...+..|+++ ||+|+|++....... ....++++++.++....+..... ........+.+.+.
T Consensus 21 ~~~p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~- 96 (394)
T 2jjm_A 21 TCYPSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQ- 96 (394)
T ss_dssp ECCC--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC----CCSCCHHHHHHHHHHHHHH-
T ss_pred hcCCCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCcc--cccCCceEEEecccccccccccccccHHHHHHHHHHHH-
Confidence 334444443332 2345666664 999999997543211 12346788877762111111110 00111111122222
Q ss_pred HHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhc--CCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHH
Q 011690 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIE 165 (479)
Q Consensus 88 ~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~--~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 165 (479)
..+||+||+|++. +..+.+.++++.. ++|+|++.|+....... ... .++.+ +
T Consensus 97 -----------~~~~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-----~~~---~~~~~-----~ 150 (394)
T 2jjm_A 97 -----------RENLDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITVLG-----SDP---SLNNL-----I 150 (394)
T ss_dssp -----------HHTCSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHTTT-----TCT---TTHHH-----H
T ss_pred -----------HcCCCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCcccccC-----CCH---HHHHH-----H
Confidence 2799999999742 3334444555454 59999999986432111 111 11223 5
Q ss_pred HHHhhcCCEEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCc
Q 011690 166 KYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 242 (479)
Q Consensus 166 ~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (479)
+.+.+.+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.... .+..+
T Consensus 151 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~---~~~~~----------------------- 204 (394)
T 2jjm_A 151 RFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMT---QLKKE----------------------- 204 (394)
T ss_dssp HHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCH---HHHHH-----------------------
T ss_pred HHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchH---HHHHH-----------------------
Confidence 666788999999999999999888765 49999999 77777665321 11111
Q ss_pred ccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC
Q 011690 243 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 322 (479)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 322 (479)
++++++. .+++++|++.+.||++.+++|++.+.+ .++
T Consensus 205 --------------~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~ 241 (394)
T 2jjm_A 205 --------------YGISESE-KILIHISNFRKVKRVQDVVQAFAKIVT----------------------------EVD 241 (394)
T ss_dssp --------------TTCC----CEEEEECCCCGGGTHHHHHHHHHHHHH----------------------------SSC
T ss_pred --------------cCCCCCC-eEEEEeeccccccCHHHHHHHHHHHHh----------------------------hCC
Confidence 1233344 489999999999999999999999875 246
Q ss_pred EEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec
Q 011690 323 LLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 401 (479)
Q Consensus 323 ~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~ 401 (479)
++|+|+|+|+..+.+++.++++++ ++|.|.|. .+++..+|++||++|+| |..|++|++++|||+||+|||+++
T Consensus 242 ~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~p---s~~e~~~~~~~EAma~G~PvI~~~ 315 (394)
T 2jjm_A 242 AKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGK---QDNVAELLAMSDLMLLL---SEKESFGLVLLEAMACGVPCIGTR 315 (394)
T ss_dssp CEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBS---CSCTHHHHHTCSEEEEC---CSCCSCCHHHHHHHHTTCCEEEEC
T ss_pred CEEEEECCchHHHHHHHHHHHcCCCCeEEEeCc---hhhHHHHHHhCCEEEec---cccCCCchHHHHHHhcCCCEEEec
Confidence 899999999999999999999998 78999997 79999999999999999 567899999999999999999999
Q ss_pred CccchhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHHHHhh
Q 011690 402 YSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 402 ~~~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
.++.+|+++++.+|++++ |+++++++|.++++ +++.++.+++++++.. ..++|+...++ +..++++++++
T Consensus 316 ~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~ 388 (394)
T 2jjm_A 316 VGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLK----DEELHRNMGERARESVYEQFRSEKIVSQ-YETIYYDVLRD 388 (394)
T ss_dssp CTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHSCHHHHHHH-HHHHHHHTC--
T ss_pred CCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHhh
Confidence 999999999999999994 89999999999999 5899999999998865 67888776653 55666666543
No 6
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=1.7e-36 Score=310.11 Aligned_cols=357 Identities=14% Similarity=0.137 Sum_probs=247.8
Q ss_pred CCcceEEEEEecCCCCChhH----HHHHHHHHhhCCCcEEEEecCCCCC-cccccCCCCeEEEEeecCCCCCCCCCchhH
Q 011690 2 GRRGRACVVVLGDLGRSPRM----QYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLK 76 (479)
Q Consensus 2 ~~~~~~~i~~~~~~g~~~r~----~~~a~~La~~~G~eV~Vv~~~~~~~-~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~ 76 (479)
.+++++++++.......+|. ...+..|+++ ||+|+|++...... ........+ ++++++.... .........
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 94 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGS-VARLRFGPA 94 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC-------------CCHH
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEeccccCC-cccccccHH
Confidence 34555666653221222333 3456666664 99999999776533 111111222 4444441000 000000001
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHH
Q 011690 77 PVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIY 156 (479)
Q Consensus 77 ~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~ 156 (479)
....+.+.+.+ .+||+||++.+..... +.++++..++|+|+++|+.... ......+.
T Consensus 95 ~~~~l~~~l~~------------~~~Dii~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~~--------~~~~~~~~ 151 (406)
T 2gek_A 95 THRKVKKWIAE------------GDFDVLHIHEPNAPSL---SMLALQAAEGPIVATFHTSTTK--------SLTLSVFQ 151 (406)
T ss_dssp HHHHHHHHHHH------------HCCSEEEEECCCSSSH---HHHHHHHEESSEEEEECCCCCS--------HHHHHHHH
T ss_pred HHHHHHHHHHh------------cCCCEEEECCccchHH---HHHHHHhcCCCEEEEEcCcchh--------hhhHHHHH
Confidence 11222222222 6999999999654432 3345556689999999986411 01111111
Q ss_pred HHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccc
Q 011690 157 RCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 234 (479)
Q Consensus 157 ~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (479)
+++ + ...+.+|.++++|+.+++.+.+.++.+ + +|||+ +.+.|.+....
T Consensus 152 ~~~-----~-~~~~~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~----------------------- 201 (406)
T 2gek_A 152 GIL-----R-PYHEKIIGRIAVSDLARRWQMEALGSDAV-EIPNGVDVASFADAPLL----------------------- 201 (406)
T ss_dssp STT-----H-HHHTTCSEEEESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCCC-----------------------
T ss_pred HHH-----H-HHHhhCCEEEECCHHHHHHHHHhcCCCcE-EecCCCChhhcCCCchh-----------------------
Confidence 222 4 566889999999999999998887766 7 99998 54334332210
Q ss_pred cccccCCcccccchhccccccccccCCCCCeEEEEEecC-CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhc
Q 011690 235 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEIS 313 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~-~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 313 (479)
...+.++ ..++++|++ .+.||++.+++|+..+.++
T Consensus 202 ----------------------~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~--------------------- 237 (406)
T 2gek_A 202 ----------------------DGYPREG-RTVLFLGRYDEPRKGMAVLLAALPKLVAR--------------------- 237 (406)
T ss_dssp ----------------------TTCSCSS-CEEEEESCTTSGGGCHHHHHHHHHHHHTT---------------------
T ss_pred ----------------------hhccCCC-eEEEEEeeeCccccCHHHHHHHHHHHHHH---------------------
Confidence 0122233 489999999 9999999999999998764
Q ss_pred cCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-CCCCCcHHHHHHHh
Q 011690 314 DGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFG 392 (479)
Q Consensus 314 ~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~llEama 392 (479)
+|+++|+|+|+|+. +.+++.++++ .++|.|.|. ++.+++..+|++||++|+| | ..|++|++++|||+
T Consensus 238 ------~~~~~l~i~G~~~~-~~l~~~~~~~-~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~~e~~~~~~~Ea~a 305 (406)
T 2gek_A 238 ------FPDVEILIVGRGDE-DELREQAGDL-AGHLRFLGQ-VDDATKASAMRSADVYCAP---HLGGESFGIVLVEAMA 305 (406)
T ss_dssp ------STTCEEEEESCSCH-HHHHHHTGGG-GGGEEECCS-CCHHHHHHHHHHSSEEEEC---CCSCCSSCHHHHHHHH
T ss_pred ------CCCeEEEEEcCCcH-HHHHHHHHhc-cCcEEEEec-CCHHHHHHHHHHCCEEEec---CCCCCCCchHHHHHHH
Confidence 78999999999988 8888888776 478999997 9999999999999999998 5 48899999999999
Q ss_pred CCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q 011690 393 CGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 470 (479)
Q Consensus 393 ~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 470 (479)
||+|||+++.++..|++.++.+|+++ .|+++++++|.++++ +++.++.+++++++....++|+...++ +..++
T Consensus 306 ~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~ 380 (406)
T 2gek_A 306 AGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILE----DDQLRAGYVARASERVHRYDWSVVSAQ-IMRVY 380 (406)
T ss_dssp HTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHGGGGBHHHHHHH-HHHHH
T ss_pred cCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHH
Confidence 99999999999999999999999999 689999999999999 589999999999987667888766653 55666
Q ss_pred HHHHh
Q 011690 471 TEVIS 475 (479)
Q Consensus 471 ~~~~~ 475 (479)
++++.
T Consensus 381 ~~~~~ 385 (406)
T 2gek_A 381 ETVSG 385 (406)
T ss_dssp HHHCC
T ss_pred HHHHh
Confidence 66654
No 7
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=3.2e-37 Score=312.06 Aligned_cols=327 Identities=13% Similarity=0.094 Sum_probs=229.0
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011690 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (479)
Q Consensus 21 ~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~ 100 (479)
+...+..|+++ ||+|+|++....... .+++++++++ .. . .....+ ....... +..++ +..
T Consensus 20 ~~~l~~~L~~~-G~~V~v~~~~~~~~~-----~~~~~v~~~~--~~-~--~~~~~~----~~~~~~~----l~~~i-~~~ 79 (374)
T 2iw1_A 20 FMRIASTVAAR-GHHVRVYTQSWEGDC-----PKAFELIQVP--VK-S--HTNHGR----NAEYYAW----VQNHL-KEH 79 (374)
T ss_dssp HHHHHHHHHHT-TCCEEEEESEECSCC-----CTTCEEEECC--CC-C--SSHHHH----HHHHHHH----HHHHH-HHS
T ss_pred HHHHHHHHHhC-CCeEEEEecCCCCCC-----CCCcEEEEEc--cC-c--ccchhh----HHHHHHH----HHHHH-hcc
Confidence 33456666775 999999997643211 2578999888 21 1 111111 1111111 11122 227
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhh--cCCEEEEe
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGK--MANGCLCV 178 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~ad~vi~v 178 (479)
+||+||++++..... +.++....+++.+.+.|+..+. .....+.+.++ ++...+ .+|.++++
T Consensus 80 ~~Dvv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 80 PADRVVGFNKMPGLD---VYFAADVCYAEKVAQEKGFLYR--------LTSRYRHYAAF-----ERATFEQGKSTKLMML 143 (374)
T ss_dssp CCSEEEESSCCTTCS---EEECCSCCHHHHHHHHCCHHHH--------TSHHHHHHHHH-----HHHHHSTTCCCEEEES
T ss_pred CCCEEEEecCCCCce---eeeccccccceeeeecccchhh--------hcHHHHHHHHH-----HHHHhhccCCcEEEEc
Confidence 999999998422110 0001111112222223332211 11111222333 555544 69999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCCh-HHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
|+.+++.+.+.+|.+ +.++||| +.+.|.+... ..+..+..+
T Consensus 144 s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~---------------------------------- 189 (374)
T 2iw1_A 144 TDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQK---------------------------------- 189 (374)
T ss_dssp CHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHH----------------------------------
T ss_pred CHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHH----------------------------------
Confidence 999999998888864 8999999 7666765432 223333332
Q ss_pred ccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 254 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
+++++++ .+++++|++.+.||++.+++|+..+.++ ..++++|+|+|+|+
T Consensus 190 ---~~~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~g~- 238 (374)
T 2iw1_A 190 ---NGIKEQQ-NLLLQVGSDFGRKGVDRSIEALASLPES--------------------------LRHNTLLFVVGQDK- 238 (374)
T ss_dssp ---TTCCTTC-EEEEEECSCTTTTTHHHHHHHHHTSCHH--------------------------HHHTEEEEEESSSC-
T ss_pred ---hCCCCCC-eEEEEeccchhhcCHHHHHHHHHHhHhc--------------------------cCCceEEEEEcCCC-
Confidence 2343444 4899999999999999999999988653 13689999999998
Q ss_pred hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC
Q 011690 334 KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 412 (479)
Q Consensus 334 ~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~ 412 (479)
.+.+++.++++++ ++|.|+|. .+++..+|++||++|+| |..|++|++++|||+||+|||+++.++..|++.++
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~p---s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~ 312 (374)
T 2iw1_A 239 PRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLHP---AYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA 312 (374)
T ss_dssp CHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEECCC---cccHHHHHHhcCEEEec---cccCCcccHHHHHHHCCCCEEEecCCCchhhhccC
Confidence 4788999999998 78999997 78999999999999998 66789999999999999999999999999999999
Q ss_pred ccEEEeC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhch
Q 011690 413 KNGLLFS---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 458 (479)
Q Consensus 413 ~~G~l~~---~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w 458 (479)
.+|+++. |+++++++|.++++ +++.++.+++++++....++|
T Consensus 313 ~~g~~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~ 357 (374)
T 2iw1_A 313 NCGTVIAEPFSQEQLNEVLRKALT----QSPLRMAWAENARHYADTQDL 357 (374)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSCC
T ss_pred CceEEeCCCCCHHHHHHHHHHHHc----ChHHHHHHHHHHHHHHHHhhH
Confidence 9999995 79999999999999 589999999999886555544
No 8
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1.2e-36 Score=314.21 Aligned_cols=275 Identities=16% Similarity=0.204 Sum_probs=206.0
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEE-Ee
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL-CV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi-~v 178 (479)
.+||+||+|++..... ..+++ .++|+|++.|+.... .....++.+ ++.+ ..+|.++ ++
T Consensus 125 ~~~Dvv~~~~~~~~~~---~~~~~--~~~p~v~~~h~~~~~----------~~~~~~~~~-----~~~~-~~~~~~i~~~ 183 (416)
T 2x6q_A 125 SSFDYVLVHDPQPAAL---IEFYE--KKSPWLWRCHIDLSS----------PNREFWEFL-----RRFV-EKYDRYIFHL 183 (416)
T ss_dssp GGSSEEEEESSTTGGG---GGGSC--CCSCEEEECCSCCSS----------CCHHHHHHH-----HHHH-TTSSEEEESS
T ss_pred cCCCEEEEeccchhhH---HHHHH--hcCCEEEEEccccCC----------ccHHHHHHH-----HHHH-HhCCEEEEec
Confidence 6899999999643321 11222 248999999986411 111222222 4444 4566655 66
Q ss_pred CHHHHHHHHHhhC-CeEEEecCC-CCCCCCCC--ChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWG-IKATVLYDQ-PPEFFHPT--SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~-~~~~vi~n~-~~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+..++. +. .++.+|||| +...|.+. +...+..+..+
T Consensus 184 s~~~~~~----~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~----------------------------------- 224 (416)
T 2x6q_A 184 PEYVQPE----LDRNKAVIMPPSIDPLSEKNVELKQTEILRILER----------------------------------- 224 (416)
T ss_dssp GGGSCTT----SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHH-----------------------------------
T ss_pred hHHHHhh----CCccceEEeCCCCChhhhcccccChhhHHHHHHH-----------------------------------
Confidence 7665542 23 358899999 66555432 22233333322
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC-
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD- 333 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~- 333 (479)
++++++++ +++++||+.+.||++.+++|++.+.++ .|+++|+|+|+|+.
T Consensus 225 --~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~ 274 (416)
T 2x6q_A 225 --FDVDPEKP-IITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------IPGVQLLLVGVMAHD 274 (416)
T ss_dssp --TTCCTTSC-EEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------CTTCEEEEEECCCTT
T ss_pred --hCCCCCCc-EEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEecCccc
Confidence 23445554 899999999999999999999999876 78999999999975
Q ss_pred ----hHHHHHHHHHcCC-CcEEEecCCCC---cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc
Q 011690 334 ----KESYEEKIRRLRL-KRVAFRTMWLS---AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 334 ----~~~l~~~~~~~~l-~~V~f~G~~~~---~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~ 405 (479)
.+.+++.++++++ ++|.|+|. ++ .+++..+|++||++|+| |..|++|++++|||+||+|||+|+.++.
T Consensus 275 ~~~~~~~l~~~~~~~~~~~~V~~~G~-~~~~~~~~~~~~~~~ad~~v~p---s~~E~~~~~~lEAma~G~PvI~~~~~g~ 350 (416)
T 2x6q_A 275 DPEGWIYFEKTLRKIGEDYDVKVLTN-LIGVHAREVNAFQRASDVILQM---SIREGFGLTVTEAMWKGKPVIGRAVGGI 350 (416)
T ss_dssp CHHHHHHHHHHHHHHTTCTTEEEEEG-GGTCCHHHHHHHHHHCSEEEEC---CSSCSSCHHHHHHHHTTCCEEEESCHHH
T ss_pred chhHHHHHHHHHHHhCCCCcEEEecc-cCCCCHHHHHHHHHhCCEEEEC---CCcCCCccHHHHHHHcCCCEEEccCCCC
Confidence 4678888999998 79999994 44 67999999999999998 6679999999999999999999999999
Q ss_pred hhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHHH
Q 011690 406 EELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 406 ~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~ 473 (479)
+|++.++.+|++++|+++++++|.++++ +++.++.+++++++.. ..++|+...++ ...+++++
T Consensus 351 ~e~i~~~~~g~l~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~-~~~~~~~l 414 (416)
T 2x6q_A 351 KFQIVDGETGFLVRDANEAVEVVLYLLK----HPEVSKEMGAKAKERVRKNFIITKHMER-YLDILNSL 414 (416)
T ss_dssp HHHCCBTTTEEEESSHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHTBHHHHHHH-HHHHHHTC
T ss_pred hhheecCCCeEEECCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHHHHHHH-HHHHHHHh
Confidence 9999999999999999999999999999 5899999999988754 35777766543 34444443
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=5.8e-35 Score=307.83 Aligned_cols=298 Identities=13% Similarity=0.117 Sum_probs=216.5
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHH-HhcCCcEEEEecCchhhh-hh---hh-cCCCchhHH--HHHHHhHHHHHHHHhhc
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTL-LS---LS-LGRRSHFVS--IYRCFSVLRIEKYYGKM 171 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~-~~~~~~~ii~~h~~~~~~-~~---~~-~~~~~~~~~--~~~~~~~~~~e~~~~~~ 171 (479)
.+||+||+|++ ....++.+++ +..++|+|++.|+..+.- .. .. .+....... ...++.....++...+.
T Consensus 128 ~~~Divh~~~~---~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 128 WRPDVVHAHDW---HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCCSEEEEETG---GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCCEEEeecc---chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 68999999983 2233344444 567899999999864210 00 00 000000000 00000011236677788
Q ss_pred CCEEEEeCHHHHHHHHHh-hC-------------CeEEEecCC-CCCCCCCCChH----------------HHHHHHHhh
Q 011690 172 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 220 (479)
Q Consensus 172 ad~vi~vS~~~~~~l~~~-~~-------------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 220 (479)
+|.++++|+.+++.+.+. +| .++.+|||| +.+.|.+.... .+..+..+
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~- 283 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIA- 283 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHH-
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHH-
Confidence 999999999999988654 44 569999999 77777765311 12222222
Q ss_pred hhcccCCCCccccccccccCCcccccchhccccccccccCC-CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhcc
Q 011690 221 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299 (479)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~ 299 (479)
+++++ .+..+++++||+.+.||++.+++|++.+.+
T Consensus 284 ------------------------------------~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 319 (485)
T 2qzs_A 284 ------------------------------------MGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE-------- 319 (485)
T ss_dssp ------------------------------------HTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--------
T ss_pred ------------------------------------cCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--------
Confidence 23443 123489999999999999999999999864
Q ss_pred CCCchhhhhHhhhccCcccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcEE-EecCCCCcchHHHHHHcCCEEEEccc
Q 011690 300 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 376 (479)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V~-f~G~~~~~~~~~~~l~~adi~v~p~~ 376 (479)
++++|+|+|+|+ ..+.+++.+++++ ++|. |.|. +.+++..+|++||++|+|
T Consensus 320 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p-- 373 (485)
T 2qzs_A 320 ---------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIGY--HEAFSHRIMGGADVILVP-- 373 (485)
T ss_dssp ---------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEESC--CHHHHHHHHHHCSEEEEC--
T ss_pred ---------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCCC--CHHHHHHHHHhCCEEEEC--
Confidence 379999999996 5788888888876 7886 7774 667779999999999999
Q ss_pred CCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC---------ccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 377 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 377 ~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~---------~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
|..|+||++++|||+||+|||+|+.|+.+|++.++ .+|+++ .|+++|+++|.++++.. ++++.++++
T Consensus 374 -S~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~ 451 (485)
T 2qzs_A 374 -SRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLW-SRPSLWRFV 451 (485)
T ss_dssp -CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHH-TSHHHHHHH
T ss_pred -CccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHc-CCHHHHHHH
Confidence 66789999999999999999999999999999998 899999 47999999999999300 068999999
Q ss_pred HHHHHHhhhhhchHHHHHHHHHHHHHHHHhh
Q 011690 446 RNGTLEMGLSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 446 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
++++++ ..++|+...++ ...++++++.+
T Consensus 452 ~~~~~~--~~fs~~~~~~~-~~~ly~~~~~~ 479 (485)
T 2qzs_A 452 QRQAMA--MDFSWQVAAKS-YRELYYRLKLE 479 (485)
T ss_dssp HHHHHH--CCCCHHHHHHH-HHHHHHHHC--
T ss_pred HHHHHh--hcCCHHHHHHH-HHHHHHHhhhh
Confidence 999876 47899887754 56677766543
No 10
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=7.9e-35 Score=326.24 Aligned_cols=373 Identities=11% Similarity=0.088 Sum_probs=249.9
Q ss_pred HHHHhhCCCcEE----EEecCCCCC--------cccccCCCCeEEEEeecCCCC---CCCCCchhHHHHHHHHHHHHHHH
Q 011690 26 LSLARQMSLEVD----VVAYGGSKP--------HAAILEHPSIHIHTMTQWPTI---PRGLPKVLKPVLLLLKPLIQFFM 90 (479)
Q Consensus 26 ~~La~~~G~eV~----Vv~~~~~~~--------~~~~~~~~gi~i~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 90 (479)
..|+++ ||+|+ |+|.....+ ...+...+|++|+++|..+.. .....+. ....++..+.. .
T Consensus 321 ~~L~~~-G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~-~L~~~L~~F~~---~ 395 (816)
T 3s28_A 321 QRIKQQ-GLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRF-EVWPYLETYTE---D 395 (816)
T ss_dssp HHHHHT-TCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTT-TCGGGHHHHHH---H
T ss_pred HHHHHC-CCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHH-HHHHHHHHHHH---H
Confidence 345554 99886 898653221 111222469999999943311 0111110 00111111111 1
Q ss_pred HHHHHHhh-cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHh
Q 011690 91 LLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYG 169 (479)
Q Consensus 91 ~~~~l~~~-~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 169 (479)
.+..++.. ..+||+||+|. ..+..++.++++..|+|+|++.|+...............+...++.......|+..+
T Consensus 396 ~l~~il~~~~~~PDVIHsH~---~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l 472 (816)
T 3s28_A 396 AAVELSKELNGKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAM 472 (816)
T ss_dssp HHHHHHHHCSSCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEeCC---chHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 12222222 24799999997 556667778888889999999999763211100000001111111111123477888
Q ss_pred hcCCEEEEeCHHHHHHHHH---hhCC---------------------eEEEecCC-CCCCCCCCChHHHH--HHHHhhhh
Q 011690 170 KMANGCLCVTQAMQHELAQ---NWGI---------------------KATVLYDQ-PPEFFHPTSLEEKH--ELFCRLNK 222 (479)
Q Consensus 170 ~~ad~vi~vS~~~~~~l~~---~~~~---------------------~~~vi~n~-~~~~f~~~~~~~~~--~~~~~~~~ 222 (479)
+.||.||++|+..++.+.+ .|+. ++.+|||| |.+.|.|.....+. .+...+..
T Consensus 473 ~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~ 552 (816)
T 3s28_A 473 NHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEE 552 (816)
T ss_dssp HHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHH
T ss_pred HhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccc
Confidence 9999999999998874221 1111 68999999 88888776422110 00000000
Q ss_pred cccCCCCccccccccccCCcccccchhcccccccccc--CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccC
Q 011690 223 ILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300 (479)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~ 300 (479)
....| .-.+..+++ .++++ +|+++||+.+.||++.+++|+..+.++
T Consensus 553 ~l~~p-----------------------~~~r~~lg~l~~~~~~-vIl~vGRl~~~KGid~LIeA~~~L~~~-------- 600 (816)
T 3s28_A 553 LLYSD-----------------------VENKEHLCVLKDKKKP-ILFTMARLDRVKNLSGLVEWYGKNTRL-------- 600 (816)
T ss_dssp HHHCS-----------------------CCBTTEESCBSCTTSC-EEEEECCCCTTTTHHHHHHHHHHCHHH--------
T ss_pred cccch-----------------------hhHHHHhcccCCCCCe-EEEEEccCcccCCHHHHHHHHHHHHhh--------
Confidence 00000 001222333 34454 899999999999999999999999875
Q ss_pred CCchhhhhHhhhccCcccCCCCEEEEEEecCC-----------ChHHHHHHHHHcCC-CcEEEecC---CCCcchHHHHH
Q 011690 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRL-KRVAFRTM---WLSAEDYPLLL 365 (479)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-----------~~~~l~~~~~~~~l-~~V~f~G~---~~~~~~~~~~l 365 (479)
.|+++|+|+|+|+ ..+.+++.++++++ ++|.|+|. +++.+++..+|
T Consensus 601 -------------------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~ 661 (816)
T 3s28_A 601 -------------------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYI 661 (816)
T ss_dssp -------------------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHH
T ss_pred -------------------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHH
Confidence 6789999999998 56788999999999 79999994 13458899999
Q ss_pred H-cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHH----hcCCCC
Q 011690 366 G-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLF----KGFPDD 438 (479)
Q Consensus 366 ~-~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~----~~~~~~ 438 (479)
+ ++|++|+| |..|+||++++||||||+|||+|+.|+.+|++.++.+|+++ .|++++|++|.+++ + |
T Consensus 662 ~~aaDvfV~P---S~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~----d 734 (816)
T 3s28_A 662 CDTKGAFVQP---ALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKE----D 734 (816)
T ss_dssp HHTTCEEEEC---CSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHH----C
T ss_pred HhcCeEEEEC---CCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhcc----C
Confidence 8 68999999 67799999999999999999999999999999999999999 47999999998776 6 6
Q ss_pred HHHHHHHHHHHHHhh-hhhchHHHHHH
Q 011690 439 SDVLKKLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 439 ~~~~~~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
++.++++++++++.. ..++|+...++
T Consensus 735 ~~~~~~m~~~ar~~a~~~fSwe~~a~~ 761 (816)
T 3s28_A 735 PSHWDEISKGGLQRIEEKYTWQIYSQR 761 (816)
T ss_dssp THHHHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 899999999998865 57888766554
No 11
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=7.6e-35 Score=306.95 Aligned_cols=295 Identities=12% Similarity=0.111 Sum_probs=218.0
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHh--cCCcEEEEecCchhhh-hh---h-hcCCCchhHH--HHHHHhHHHHHHHHh
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTL-LS---L-SLGRRSHFVS--IYRCFSVLRIEKYYG 169 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~--~~~~~ii~~h~~~~~~-~~---~-~~~~~~~~~~--~~~~~~~~~~e~~~~ 169 (479)
..+||+||+|+ .....++.++++. .++|+|++.|+..+.- .. + ..+....... ...++.....++...
T Consensus 128 ~~~~DiIh~~~---~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 128 GWRPDMVHAHD---WQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SCCCSEEEEEH---HHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCCEEEecc---cchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 36899999998 3333344455554 7899999999864210 00 0 0000000000 000000012367777
Q ss_pred hcCCEEEEeCHHHHHHHHHh-hC-----------CeEEEecCC-CCCCCCCCChH----------------HHHHHHHhh
Q 011690 170 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 220 (479)
Q Consensus 170 ~~ad~vi~vS~~~~~~l~~~-~~-----------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 220 (479)
+.||.++++|+.+++.+.+. +| .++.+|||| +.+.|.+.... .+..+..
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-- 282 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE-- 282 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH--
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHH--
Confidence 88999999999999988764 33 249999999 77778765321 1222222
Q ss_pred hhcccCCCCccccccccccCCcccccchhccccccccccCCC-CCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhcc
Q 011690 221 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299 (479)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~ 299 (479)
.++++++ ++ +++++||+.+.||++.+++|++.+.+
T Consensus 283 -----------------------------------~~~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 318 (485)
T 1rzu_A 283 -----------------------------------HFRIDDDGSP-LFCVISRLTWQKGIDLMAEAVDEIVS-------- 318 (485)
T ss_dssp -----------------------------------HHTCCCSSSC-EEEEESCBSTTTTHHHHHTTHHHHHH--------
T ss_pred -----------------------------------hcCCCCCCCe-EEEEEccCccccCHHHHHHHHHHHHh--------
Confidence 2345554 44 89999999999999999999999864
Q ss_pred CCCchhhhhHhhhccCcccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcEE-EecCCCCcchHHHHHHcCCEEEEccc
Q 011690 300 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 376 (479)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V~-f~G~~~~~~~~~~~l~~adi~v~p~~ 376 (479)
++++|+|+|+|+ ..+.+++.+++++ ++|. |.|. +.+++..+|++||++|+|
T Consensus 319 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p-- 372 (485)
T 1rzu_A 319 ---------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIGY--NEPLSHLMQAGCDAIIIP-- 372 (485)
T ss_dssp ---------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEESC--CHHHHHHHHHHCSEEEEC--
T ss_pred ---------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecCC--CHHHHHHHHhcCCEEEEC--
Confidence 379999999996 4688888888876 7887 6774 667779999999999999
Q ss_pred CCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC---------ccEEEe--CCHHHHHHHHHHHH---hcCCCCHHHH
Q 011690 377 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLMLF---KGFPDDSDVL 442 (479)
Q Consensus 377 ~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~---------~~G~l~--~~~~~la~~l~~l~---~~~~~~~~~~ 442 (479)
|..|+||++++|||+||+|||+|+.|+++|++.++ .+|+++ .|+++|+++|.+++ + +++.+
T Consensus 373 -S~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~----~~~~~ 447 (485)
T 1rzu_A 373 -SRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH----DPKLW 447 (485)
T ss_dssp -CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHT----CHHHH
T ss_pred -cccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhC----CHHHH
Confidence 66799999999999999999999999999999998 899999 47999999999999 5 68999
Q ss_pred HHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHhh
Q 011690 443 KKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 443 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
+++++++++ ..++|+...++ +..++++++++
T Consensus 448 ~~~~~~~~~--~~fs~~~~~~~-~~~~y~~~~~~ 478 (485)
T 1rzu_A 448 TQMQKLGMK--SDVSWEKSAGL-YAALYSQLISK 478 (485)
T ss_dssp HHHHHHHHT--CCCBHHHHHHH-HHHHHHHHTC-
T ss_pred HHHHHHHHH--HhCChHHHHHH-HHHHHHHhhCC
Confidence 999999986 47899887654 56677776653
No 12
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=2.6e-33 Score=288.59 Aligned_cols=269 Identities=13% Similarity=0.185 Sum_probs=210.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCC----cEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCC--
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS----AFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMAN-- 173 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~----~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad-- 173 (479)
.+||+||+|++ .. ..+.++....++ +++..+|..... .... .+.+.+.+|
T Consensus 80 ~~~Div~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~------------~~~~~~~~~~~ 135 (413)
T 3oy2_A 80 HKPDIVMIYND---PI-VIGNYLLAMGKCSHRTKIVLYVDLVSKN--------IREN------------LWWIFSHPKVV 135 (413)
T ss_dssp HCCSEEEEEEC---HH-HHHHHHHHGGGCCSCCEEEEEECCCSBS--------CCGG------------GGGGGGCTTEE
T ss_pred cCCCEEEEcch---HH-HHHHHHHHhccCCCCCceeeeccccchh--------hHHH------------HHHHHhccCCc
Confidence 79999999962 22 233444445444 345566655310 0100 123457788
Q ss_pred EEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 174 GCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 174 ~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
.++++|+.+++.+.+ ++. ++.+|||| +.+.| .. .+..
T Consensus 136 ~ii~~S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~--~~--~~~~----------------------------------- 175 (413)
T 3oy2_A 136 GVMAMSKCWISDICN-YGCKVPINIVSHFVDTKTI--YD--ARKL----------------------------------- 175 (413)
T ss_dssp EEEESSTHHHHHHHH-TTCCSCEEECCCCCCCCCC--TT--HHHH-----------------------------------
T ss_pred eEEEcCHHHHHHHHH-cCCCCceEEeCCCCCHHHH--HH--HHHh-----------------------------------
Confidence 999999999999988 564 49999999 66666 11 1111
Q ss_pred cccccccccCC-CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEe
Q 011690 251 SLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 329 (479)
Q Consensus 251 ~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG 329 (479)
+++++ .+..+++++||+.+.||++.+++|+..+.++ .|+++|+|+|
T Consensus 176 ------~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG 222 (413)
T 3oy2_A 176 ------VGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLC 222 (413)
T ss_dssp ------TTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEE
T ss_pred ------cCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEe
Confidence 12222 1235899999999999999999999999876 8999999999
Q ss_pred cCCCh------HHHHHHHHHcCCC-c-------EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC
Q 011690 330 KGPDK------ESYEEKIRRLRLK-R-------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL 395 (479)
Q Consensus 330 ~G~~~------~~l~~~~~~~~l~-~-------V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~ 395 (479)
+|+.. +.+++.+++++++ + |.|.|. ++.+++..+|++||++|+| |..|+||++++|||+||+
T Consensus 223 ~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~-~~~~~~~~~~~~adv~v~p---S~~E~~~~~~lEAma~G~ 298 (413)
T 3oy2_A 223 NSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTV-LTDERVDMMYNACDVIVNC---SSGEGFGLCSAEGAVLGK 298 (413)
T ss_dssp ECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSC-CCHHHHHHHHHHCSEEEEC---CSCCSSCHHHHHHHTTTC
T ss_pred CCcccchhhHHHHHHHHHHHcCcccccccccceeeccCc-CCHHHHHHHHHhCCEEEeC---CCcCCCCcHHHHHHHcCC
Confidence 99865 8899999999994 4 888896 9999999999999999998 678999999999999999
Q ss_pred cEEEecCccchhccccCcc---------------EE--Ee--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hh
Q 011690 396 PVCAVSYSCIEELVKVDKN---------------GL--LF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LS 455 (479)
Q Consensus 396 PVIas~~~~~~e~i~~~~~---------------G~--l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 455 (479)
|||+|+.++.+|++.++.+ |+ ++ .|+++|+++| ++++ +++.++++++++++.. ..
T Consensus 299 PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~----~~~~~~~~~~~a~~~~~~~ 373 (413)
T 3oy2_A 299 PLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK----DEKNRKEYGKRVQDFVKTK 373 (413)
T ss_dssp CEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT----SHHHHHHHHHHHHHHHTTS
T ss_pred CEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhc----CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998887 88 87 5899999999 9999 6999999999998864 46
Q ss_pred hchHHHHHHHHHHHHHHHHh
Q 011690 456 ARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 456 ~~w~~~~~~~~~~~~~~~~~ 475 (479)
++|+...++ +..+++++++
T Consensus 374 fs~~~~~~~-~~~~~~~~~~ 392 (413)
T 3oy2_A 374 PTWDDISSD-IIDFFNSLLR 392 (413)
T ss_dssp CCHHHHHHH-HHHHHHHHTC
T ss_pred CCHHHHHHH-HHHHHHHHHh
Confidence 788877654 5666676654
No 13
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=3e-33 Score=281.34 Aligned_cols=289 Identities=17% Similarity=0.113 Sum_probs=216.9
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|+++ ||+|+|++....... .+++++++.+ . ...+.+.+.+ .+|
T Consensus 38 ~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~----~~~l~~~l~~------------~~~ 85 (342)
T 2iuy_A 38 NLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------E----PEEIERWLRT------------ADV 85 (342)
T ss_dssp HHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------S----HHHHHHHHHH------------CCC
T ss_pred HHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------c----HHHHHHHHHh------------cCC
Confidence 345666664 999999997654322 2455543322 1 1123333333 799
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|+||+|++..... +++..++| |+++|+.... . ..+|.++++|+.+
T Consensus 86 Dvi~~~~~~~~~~------~~~~~~~p-v~~~h~~~~~--------~--------------------~~~d~ii~~S~~~ 130 (342)
T 2iuy_A 86 DVVHDHSGGVIGP------AGLPPGTA-FISSHHFTTR--------P--------------------VNPVGCTYSSRAQ 130 (342)
T ss_dssp SEEEECSSSSSCS------TTCCTTCE-EEEEECSSSB--------C--------------------SCCTTEEESCHHH
T ss_pred CEEEECCchhhHH------HHhhcCCC-EEEecCCCCC--------c--------------------ccceEEEEcCHHH
Confidence 9999999653321 14556899 9999987510 0 1189999999999
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCC
Q 011690 183 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 261 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (479)
++.+.+ ..++.+|||+ +.+.|.+... ..+
T Consensus 131 ~~~~~~--~~~~~vi~ngvd~~~~~~~~~------------------------------------------------~~~ 160 (342)
T 2iuy_A 131 RAHCGG--GDDAPVIPIPVDPARYRSAAD------------------------------------------------QVA 160 (342)
T ss_dssp HHHTTC--CTTSCBCCCCBCGGGSCCSTT------------------------------------------------CCC
T ss_pred HHHHhc--CCceEEEcCCCChhhcCcccc------------------------------------------------cCC
Confidence 988866 5568999999 6666654431 012
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 341 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~ 341 (479)
+++ .++++|++.+.||++.+++|++.+ +++|+|+|+|+..+.+++.+
T Consensus 161 ~~~-~i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l~~~~ 207 (342)
T 2iuy_A 161 KED-FLLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYFDEIT 207 (342)
T ss_dssp CCS-CEEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHHHHHH
T ss_pred CCC-EEEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHHHHHH
Confidence 233 789999999999999999999864 48999999999999999999
Q ss_pred HHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-------CCCCCcHHHHHHHhCCCcEEEecCccchhcccc--C
Q 011690 342 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV--D 412 (479)
Q Consensus 342 ~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-------~~e~~p~~llEama~G~PVIas~~~~~~e~i~~--~ 412 (479)
++++ ++|.|+|. ++.+++..+|++||++|+|+... ..|++|++++|||+||+|||+|+.++.+|++++ +
T Consensus 208 ~~~~-~~v~~~g~-~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~ 285 (342)
T 2iuy_A 208 RRYG-STVEPIGE-VGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGE 285 (342)
T ss_dssp HHHT-TTEEECCC-CCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEE
T ss_pred HHhC-CCEEEecc-CCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCC
Confidence 9988 89999997 99999999999999999994311 179999999999999999999999999999999 9
Q ss_pred ccEEEeC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHh
Q 011690 413 KNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 413 ~~G~l~~-~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
.+|++++ |+++++++|.++++ .+..++.+.+ .++|+...++ +..+++++++
T Consensus 286 ~~g~~~~~d~~~l~~~i~~l~~--------~~~~~~~~~~---~~s~~~~~~~-~~~~~~~~~~ 337 (342)
T 2iuy_A 286 VVGYGTDFAPDEARRTLAGLPA--------SDEVRRAAVR---LWGHVTIAER-YVEQYRRLLA 337 (342)
T ss_dssp ECCSSSCCCHHHHHHHHHTSCC--------HHHHHHHHHH---HHBHHHHHHH-HHHHHHHHHT
T ss_pred CceEEcCCCHHHHHHHHHHHHH--------HHHHHHHHHH---hcCHHHHHHH-HHHHHHHHHc
Confidence 9999997 89999999988765 2233333333 6788776654 5566666654
No 14
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=1.1e-30 Score=281.86 Aligned_cols=295 Identities=15% Similarity=0.108 Sum_probs=202.8
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHh-------cCCcEEEEecCchhh------hhhhhcCCCchhHHHHH---------H
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYT------LLSLSLGRRSHFVSIYR---------C 158 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~-------~~~~~ii~~h~~~~~------~~~~~~~~~~~~~~~~~---------~ 158 (479)
.+||+|+|. +.+..+..+++.. .++|+|+|+|+..+. .+.. .+.......... +
T Consensus 153 ~ddIiH~hD---W~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 153 EDVVFVCND---WHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPE-LNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp SCEEEEEES---GGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGG-GCCCGGGHHHHEEEETTTSTTC
T ss_pred CCEEEEECc---chHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhh-cCCchhhcchhhhhhccccccc
Confidence 467889998 5555555454432 378999999986421 0000 000000000000 0
Q ss_pred HhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC-----------eEEEecCC-CCCCCCCCCh-------------HHH
Q 011690 159 FSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI-----------KATVLYDQ-PPEFFHPTSL-------------EEK 213 (479)
Q Consensus 159 ~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~-----------~~~vi~n~-~~~~f~~~~~-------------~~~ 213 (479)
......++.....||.|++||+..++++.+.++. ++.+|+|| |.+.|.|... ..+
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K 308 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAK 308 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHH
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhh
Confidence 0001125566678999999999999998775431 38999999 8888877421 111
Q ss_pred HHHHHhhhhcccCCCCccccccccccCCcccccchhcccccccccc--CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHH
Q 011690 214 HELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDR 291 (479)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~ 291 (479)
..-...+. ..+++ .++.| +|+++||+.++||++.|++|+..+.+
T Consensus 309 ~~~k~~l~---------------------------------~~~gl~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l~~ 354 (536)
T 3vue_A 309 ALNKEALQ---------------------------------AEAGLPVDRKIP-LIAFIGRLEEQKGPDVMAAAIPELMQ 354 (536)
T ss_dssp HHHHHHHH---------------------------------HHTTSCCCTTSC-EEEEECCBSGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHH---------------------------------HhcCCCCCCCCc-EEEEEeeccccCChHHHHHHHHHhHh
Confidence 11001111 11223 35566 89999999999999999999998853
Q ss_pred HHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh--HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCC
Q 011690 292 RVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD 369 (479)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~--~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~ad 369 (479)
.+.+|+|+|.|+.. +.++..+..++ .+|.|.+. .+.+++..+|++||
T Consensus 355 -----------------------------~~~~l~l~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aD 403 (536)
T 3vue_A 355 -----------------------------EDVQIVLLGTGKKKFEKLLKSMEEKYP-GKVRAVVK-FNAPLAHLIMAGAD 403 (536)
T ss_dssp -----------------------------SSCEEEEECCBCHHHHHHHHHHHHHST-TTEEEECS-CCHHHHHHHHHHCS
T ss_pred -----------------------------hCCeEEEEeccCchHHHHHHHHHhhcC-CceEEEEe-ccHHHHHHHHHhhh
Confidence 35788888887643 33444444332 68999997 89999999999999
Q ss_pred EEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe------------CCHHHHHHHHHHHHhcCCC
Q 011690 370 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF------------SSSSELADQLLMLFKGFPD 437 (479)
Q Consensus 370 i~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~------------~~~~~la~~l~~l~~~~~~ 437 (479)
++|+| |..|+||++++|||+||+|||+|+.||++|+|.++.+|+.+ .|+++|+++|.++++.+.
T Consensus 404 ~~v~P---S~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~- 479 (536)
T 3vue_A 404 VLAVP---SRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVG- 479 (536)
T ss_dssp EEEEC---CSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred eeecc---cccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcC-
Confidence 99999 77799999999999999999999999999999999999954 247899999999887432
Q ss_pred CHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHH
Q 011690 438 DSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 472 (479)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 472 (479)
+ +.++++++++.+ ..++|+..-++. .+++.+
T Consensus 480 ~-~~~~~~~~~am~--~~fSW~~~A~~y-~~ly~~ 510 (536)
T 3vue_A 480 T-PAYEEMVRNCMN--QDLSWKGPAKNW-ENVLLG 510 (536)
T ss_dssp S-HHHHHHHHHHHH--SCCSSHHHHHHH-HHHHHT
T ss_pred c-HHHHHHHHHHHH--hcCCHHHHHHHH-HHHHHH
Confidence 3 446777777654 478887776553 344444
No 15
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.97 E-value=7.6e-30 Score=258.00 Aligned_cols=309 Identities=15% Similarity=0.108 Sum_probs=209.7
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|+++ ||+|+|++..+.. ........|++++.++....... .....+......+..+.. +..++ +..+|
T Consensus 25 ~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-l~~~l-~~~~p 97 (364)
T 1f0k_A 25 AVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIRISGLRGK---GIKALIAAPLRIFNAWRQ-ARAIM-KAYKP 97 (364)
T ss_dssp HHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECCCCCCTTC---CHHHHHTCHHHHHHHHHH-HHHHH-HHHCC
T ss_pred HHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEecCCccCcC---ccHHHHHHHHHHHHHHHH-HHHHH-HhcCC
Confidence 456666665 9999999976532 11223345888888872111110 101111111111111111 11222 22699
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|+||++.+. ....+.++++..++|+|++.|+.. .. .. ++++.+.+|.+++.++..
T Consensus 98 Dvv~~~~~~---~~~~~~~~~~~~~~p~v~~~~~~~----------~~-------~~-----~~~~~~~~d~v~~~~~~~ 152 (364)
T 1f0k_A 98 DVVLGMGGY---VSGPGGLAAWSLGIPVVLHEQNGI----------AG-------LT-----NKWLAKIATKVMQAFPGA 152 (364)
T ss_dssp SEEEECSST---THHHHHHHHHHTTCCEEEEECSSS----------CC-------HH-----HHHHTTTCSEEEESSTTS
T ss_pred CEEEEeCCc---CchHHHHHHHHcCCCEEEEecCCC----------Cc-------HH-----HHHHHHhCCEEEecChhh
Confidence 999999843 123344566778999999888753 11 11 345567899999988764
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCC
Q 011690 183 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 261 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (479)
++ ++.+++|+ +.+.|.+.. .+.. +++.+
T Consensus 153 -------~~-~~~~i~n~v~~~~~~~~~--~~~~-----------------------------------------~~~~~ 181 (364)
T 1f0k_A 153 -------FP-NAEVVGNPVRTDVLALPL--PQQR-----------------------------------------LAGRE 181 (364)
T ss_dssp -------SS-SCEECCCCCCHHHHTSCC--HHHH-----------------------------------------HTTCC
T ss_pred -------cC-CceEeCCccchhhcccch--hhhh-----------------------------------------cccCC
Confidence 23 57799998 444444322 1111 12344
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEE-EEEEecCCChHHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEEK 340 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-l~IvG~G~~~~~l~~~ 340 (479)
+++.+++++|++.+.|+++.+++|+..+. . +++ ++++|+|+ .+.+++.
T Consensus 182 ~~~~il~~~g~~~~~k~~~~li~a~~~l~-----------------------------~-~~~~l~i~G~~~-~~~l~~~ 230 (364)
T 1f0k_A 182 GPVRVLVVGGSQGARILNQTMPQVAAKLG-----------------------------D-SVTIWHQSGKGS-QQSVEQA 230 (364)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHG-----------------------------G-GEEEEEECCTTC-HHHHHHH
T ss_pred CCcEEEEEcCchHhHHHHHHHHHHHHHhc-----------------------------C-CcEEEEEcCCch-HHHHHHH
Confidence 55667778889999999999999999873 1 577 57899998 5788889
Q ss_pred HHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch--------hccccC
Q 011690 341 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE--------ELVKVD 412 (479)
Q Consensus 341 ~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~--------e~i~~~ 412 (479)
++++++++|.|.|. + +++..+|++||++|+| | | |++++|||+||+|||+++.++.+ ++++++
T Consensus 231 ~~~~~~~~v~~~g~-~--~~~~~~~~~ad~~v~~---s-g---~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g 300 (364)
T 1f0k_A 231 YAEAGQPQHKVTEF-I--DDMAAAYAWADVVVCR---S-G---ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG 300 (364)
T ss_dssp HHHTTCTTSEEESC-C--SCHHHHHHHCSEEEEC---C-C---HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT
T ss_pred HhhcCCCceEEecc-h--hhHHHHHHhCCEEEEC---C-c---hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC
Confidence 99988888999997 5 8999999999999998 3 3 88999999999999999988764 466555
Q ss_pred ccEEEe--CC--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHH
Q 011690 413 KNGLLF--SS--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 462 (479)
Q Consensus 413 ~~G~l~--~~--~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 462 (479)
.|+++ ++ +++|+++|.++ + ++.++++++++++....++|+...
T Consensus 301 -~g~~~~~~d~~~~~la~~i~~l-~-----~~~~~~~~~~~~~~~~~~~~~~~~ 347 (364)
T 1f0k_A 301 -AAKIIEQPQLSVDAVANTLAGW-S-----RETLLTMAERARAASIPDATERVA 347 (364)
T ss_dssp -SEEECCGGGCCHHHHHHHHHTC-C-----HHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred -cEEEeccccCCHHHHHHHHHhc-C-----HHHHHHHHHHHHHhhccCHHHHHH
Confidence 59999 34 88999999888 3 889999999999866555554443
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.97 E-value=4.4e-31 Score=275.94 Aligned_cols=263 Identities=14% Similarity=0.148 Sum_probs=180.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHH-H------hcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWAS-S------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMA 172 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~-~------~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 172 (479)
.++|+||+++ ..+...+..+. + ..+.|.+...|++..... .... .+.. ++..++.+
T Consensus 131 ~~~Dvv~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~----~~~~-----~~~~~~~~ 193 (413)
T 2x0d_A 131 AKHDIFIATA---WWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFY-----QWSS----QYVL-----AESTYKYR 193 (413)
T ss_dssp CTTEEEEECS---HHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGS-----CSSH----HHHH-----HHHTTSCC
T ss_pred CCCCEEEEeh---HHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcC-----ccCh----HHHH-----HHHHhccC
Confidence 5799999987 33333332221 0 124577776777642110 0111 1112 44445555
Q ss_pred C--EEEEeCHHHHHHHHHh-hCC-eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccc
Q 011690 173 N--GCLCVTQAMQHELAQN-WGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADET 247 (479)
Q Consensus 173 d--~vi~vS~~~~~~l~~~-~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (479)
+ .++++|+.+++.+.+. ++. ++.+++|+ +.+.|.+..
T Consensus 194 ~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~-------------------------------------- 235 (413)
T 2x0d_A 194 GPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYIN-------------------------------------- 235 (413)
T ss_dssp SCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTT--------------------------------------
T ss_pred CceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhcccc--------------------------------------
Confidence 5 5899999999999875 332 37888888 433222110
Q ss_pred hhccccccccccCCCCCeEEEEEecC-CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC---E
Q 011690 248 IFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---L 323 (479)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~i~~~g~~-~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~ 323 (479)
...++. ..++++||+ .+.||++.+|+|++.+.++ +|+ +
T Consensus 236 ----------~~~~~~-~~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~ 277 (413)
T 2x0d_A 236 ----------DKRQKE-KIILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEW 277 (413)
T ss_dssp ----------SCCCCC-SEEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGC
T ss_pred ----------cccCCC-CEEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCce
Confidence 011223 367788886 6889999999999999875 664 9
Q ss_pred EEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 324 LFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 324 ~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
+|+|+|+|+.. .++++ ++|.|+|. ++.++++.+|++||++|+| |..|+||++++||||||+|||+++
T Consensus 278 ~l~ivG~~~~~-------~~l~~~~~v~f~G~-~~~~~l~~~~~~adv~v~p---S~~E~~g~~~lEAmA~G~PVV~~~- 345 (413)
T 2x0d_A 278 KIISVGEKHKD-------IALGKGIHLNSLGK-LTLEDYADLLKRSSIGISL---MISPHPSYPPLEMAHFGLRVITNK- 345 (413)
T ss_dssp EEEEEESCCCC-------EEEETTEEEEEEES-CCHHHHHHHHHHCCEEECC---CSSSSCCSHHHHHHHTTCEEEEEC-
T ss_pred EEEEEcCCchh-------hhcCCcCcEEEcCC-CCHHHHHHHHHhCCEEEEe---cCCCCCCcHHHHHHhCCCcEEEeC-
Confidence 99999999764 24566 68999997 9999999999999999999 666889999999999999999955
Q ss_pred ccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHhh
Q 011690 403 SCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 403 ~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
+|..|+++++.+|+++ .|+++||++|.+++++ ++.+++ ++++....++|+...++ ...+.++.+|
T Consensus 346 ~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~----~~~~~~---~~~~~~~~~~W~~~~~~--~~~~~~l~~~ 412 (413)
T 2x0d_A 346 YENKDLSNWHSNIVSLEQLNPENIAETLVELCMS----FNNRDV---DKKESSNMMFYINEFNE--FSFIKEIEEK 412 (413)
T ss_dssp BTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHH----TC----------CCBSCGGGCCCC-----TTHHHHHTT
T ss_pred CCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcC----HHHHHH---hHHHHHHhCCHHHHHHH--HHHHHHHHhh
Confidence 5668999999999998 5799999999999995 555544 45554557888777654 5666666665
No 17
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.96 E-value=1e-28 Score=250.39 Aligned_cols=266 Identities=13% Similarity=0.065 Sum_probs=188.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|++ ....+.+.++++..++|+|.+.|+.. + ......+. .++ .++.+.+.+|.++++|
T Consensus 94 ~~pDvv~~~~~--~~~~~~~~~~~~~~~ip~v~~~~~~~-~-----~~~~~~~~---~~~----~~~~~~~~~d~ii~~s 158 (375)
T 3beo_A 94 AKPDIVLVHGD--TTTTFIASLAAFYNQIPVGHVEAGLR-T-----WDKYSPYP---EEM----NRQLTGVMADLHFSPT 158 (375)
T ss_dssp HCCSEEEEETT--SHHHHHHHHHHHHTTCCEEEESCCCC-C-----SCTTSSTT---HHH----HHHHHHHHCSEEEESS
T ss_pred hCCCEEEEeCC--chHHHHHHHHHHHHCCCEEEEecccc-c-----ccccCCCh---hHh----hhhHHhhhhheeeCCC
Confidence 79999999974 23334445566778999987777542 0 00011111 111 1334556699999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC--CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
+..++.+.+. |.+ +.+++|+ +...|.+... .+.++..
T Consensus 159 ~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~------------------------------------ 200 (375)
T 3beo_A 159 AKSATNLQKE-NKDESRIFITGNTAIDALKTTVKET-YSHPVLE------------------------------------ 200 (375)
T ss_dssp HHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSS-CCCHHHH------------------------------------
T ss_pred HHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhh-hhHHHHH------------------------------------
Confidence 9999988764 764 8899997 2222222110 0001100
Q ss_pred cccccCCCCCeEEEEEecCCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 255 IDVFLKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
. + ++++.+++++||+.+. ||++.+++|++.+.++ +|++++++ |.|+.
T Consensus 201 -~--~-~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i~-~~g~~ 248 (375)
T 3beo_A 201 -K--L-GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVVY-PVHMN 248 (375)
T ss_dssp -T--T-TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEEE-ECCSC
T ss_pred -h--c-cCCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEEE-eCCCC
Confidence 0 1 2345578899999876 9999999999999875 78899654 77765
Q ss_pred hHHHHHHHHHc-CC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccchhccc
Q 011690 334 KESYEEKIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVK 410 (479)
Q Consensus 334 ~~~l~~~~~~~-~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~e~i~ 410 (479)
+.+++.++++ +. ++|.|+|. ++..++..+|++||++|+| | |..++|||+||+|||+++ .++.+|+++
T Consensus 249 -~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~ 318 (375)
T 3beo_A 249 -PVVRETANDILGDYGRIHLIEP-LDVIDFHNVAARSYLMLTD---S-----GGVQEEAPSLGVPVLVLRDTTERPEGIE 318 (375)
T ss_dssp -HHHHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHTCSEEEEC---C-----HHHHHHHHHHTCCEEECSSCCSCHHHHH
T ss_pred -HHHHHHHHHHhhccCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----CChHHHHHhcCCCEEEecCCCCCceeec
Confidence 3455555554 43 68999996 8888999999999999998 3 567999999999999996 488999998
Q ss_pred cCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 011690 411 VDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 469 (479)
Q Consensus 411 ~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 469 (479)
++ +|+++ .|+++|+++|.++++ |++.+++|++++++... ...|++++..+
T Consensus 319 ~g-~g~~v~~d~~~la~~i~~ll~----~~~~~~~~~~~~~~~~~----~~~~~~i~~~~ 369 (375)
T 3beo_A 319 AG-TLKLAGTDEETIFSLADELLS----DKEAHDKMSKASNPYGD----GRASERIVEAI 369 (375)
T ss_dssp TT-SEEECCSCHHHHHHHHHHHHH----CHHHHHHHCCCCCTTCC----SCHHHHHHHHH
T ss_pred CC-ceEEcCCCHHHHHHHHHHHHh----ChHhHhhhhhcCCCCCC----CcHHHHHHHHH
Confidence 87 99999 789999999999999 58899999888766433 34555544444
No 18
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.96 E-value=3.2e-28 Score=253.15 Aligned_cols=325 Identities=12% Similarity=0.067 Sum_probs=207.1
Q ss_pred ceEEEEEecCC--CCChhHHHHHHHHHhhCCCcEEEEecCCCCC--------------cccccCCCCeEEEEeecCCCCC
Q 011690 5 GRACVVVLGDL--GRSPRMQYQALSLARQMSLEVDVVAYGGSKP--------------HAAILEHPSIHIHTMTQWPTIP 68 (479)
Q Consensus 5 ~~~~i~~~~~~--g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~--------------~~~~~~~~gi~i~~~~~~~~~~ 68 (479)
++++++...++ +..+...+.+..|+++ | +|+|++...... .......+|+++++.+....+.
T Consensus 15 MkIl~is~~~~p~~~~~~~~~l~~~l~~~-G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~ 92 (406)
T 2hy7_A 15 PCYLVLSSHDFRTPRRANIHFITDQLALR-G-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTVHPF 92 (406)
T ss_dssp SCEEEEESSCTTSSSCCHHHHHHHHHHHH-S-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEECCBSSCCC
T ss_pred ceEEEEecccCCChhhhhHhHHHHHHHhC-C-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEeeccccCCc
Confidence 34555553212 2334455667778886 9 999996432100 0011124688888765211111
Q ss_pred CCCCchhHHHHHHH-HHH-HHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchh-hhhhhh
Q 011690 69 RGLPKVLKPVLLLL-KPL-IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY-TLLSLS 145 (479)
Q Consensus 69 ~~~~~~~~~~~~l~-~~l-~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~-~~~~~~ 145 (479)
.......+.+.... ... ..+...+..+. .++|+||.++ .....++. +++..++|+++++|+... ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~DvIh~~~---~~~~~~~~-~~~~~~~p~v~~~h~~~~~~~~--- 162 (406)
T 2hy7_A 93 NTRRSWLRPVEDAMFRWYAAHPPKQLLDWM---RESDVIVFES---GIAVAFIE-LAKRVNPAAKLVYRASDGLSTI--- 162 (406)
T ss_dssp CCCCGGGHHHHHHHHHHHHHCCCHHHHHHH---HHCSEEEEES---SGGGGGHH-HHHHHCTTSEEEEEESSCHHHH---
T ss_pred cccchhhhccchhHHHHHHHhHHHHHHHHh---cCCCEEEECC---chHHHHHH-HHHHhCCCEEEEEeccchhhcc---
Confidence 11111112221100 000 00011111111 3789999554 22221122 334568999999997532 100
Q ss_pred cCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcc
Q 011690 146 LGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKIL 224 (479)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~ 224 (479)
. . ....++. ++..++.+|.++++|+.+++.+.+. + ++.+|||| +.+.|.+...
T Consensus 163 -~-~---~~~~~~~-----~~~~~~~ad~vi~~S~~~~~~~~~~-~-~i~vipngvd~~~f~~~~~-------------- 216 (406)
T 2hy7_A 163 -N-V---ASYIERE-----FDRVAPTLDVIALVSPAMAAEVVSR-D-NVFHVGHGVDHNLDQLGDP-------------- 216 (406)
T ss_dssp -T-C---CHHHHHH-----HHHHGGGCSEEEESCGGGGGGCSCS-T-TEEECCCCBCTTHHHHHCS--------------
T ss_pred -c-c---cHHHHHH-----HHHHHHhCCEEEEcCHHHHHHHHhc-C-CEEEEcCCcChHhcCcccc--------------
Confidence 0 1 1222333 6777889999999999999887654 4 89999999 6554432210
Q ss_pred cCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCch
Q 011690 225 HQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 304 (479)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~ 304 (479)
.+.++..+++++|++.+.||+ +..+.++
T Consensus 217 ----------------------------------~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~------------ 244 (406)
T 2hy7_A 217 ----------------------------------SPYAEGIHAVAVGSMLFDPEF------FVVASKA------------ 244 (406)
T ss_dssp ----------------------------------CSCCSSEEEEEECCTTBCHHH------HHHHHHH------------
T ss_pred ----------------------------------cccCCCcEEEEEeccccccCH------HHHHHHh------------
Confidence 011222489999999999998 3333343
Q ss_pred hhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCC
Q 011690 305 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL 383 (479)
Q Consensus 305 ~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~ 383 (479)
.|+++|+|+|+|+ ++++++ ++|.|+|. ++.++++.+|++||++|+| |..|++
T Consensus 245 ---------------~~~~~l~ivG~g~--------~~~~~l~~~V~f~G~-~~~~~l~~~~~~adv~v~p---s~~E~~ 297 (406)
T 2hy7_A 245 ---------------FPQVTFHVIGSGM--------GRHPGYGDNVIVYGE-MKHAQTIGYIKHARFGIAP---YASEQV 297 (406)
T ss_dssp ---------------CTTEEEEEESCSS--------CCCTTCCTTEEEECC-CCHHHHHHHHHTCSEEECC---BSCSCC
T ss_pred ---------------CCCeEEEEEeCch--------HHhcCCCCCEEEcCC-CCHHHHHHHHHhcCEEEEC---CCcccC
Confidence 7899999999997 556677 78999997 9999999999999999999 566889
Q ss_pred cHHHHHHH-------hCCCcEEEecCccchhccccCccEEE-e--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 384 PMKVVDMF-------GCGLPVCAVSYSCIEELVKVDKNGLL-F--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 384 p~~llEam-------a~G~PVIas~~~~~~e~i~~~~~G~l-~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
|++++||| |||+|||+|+. +.++.+|++ + +|+++|+++|.+++++ ++ + +..
T Consensus 298 ~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~----~~-----~----~~~ 358 (406)
T 2hy7_A 298 PVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEA----PR-----V----RYR 358 (406)
T ss_dssp CTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHC----CC-----C----CCS
T ss_pred chHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhC----cc-----h----hhh
Confidence 99999999 99999999987 667889999 7 6799999999999995 32 1 223
Q ss_pred hhhchHHHHHHH
Q 011690 454 LSARWATEWEEH 465 (479)
Q Consensus 454 ~~~~w~~~~~~~ 465 (479)
..++|+..-++.
T Consensus 359 ~~~sw~~~a~~~ 370 (406)
T 2hy7_A 359 QCLNWSDTTDRV 370 (406)
T ss_dssp CCCBHHHHHHHH
T ss_pred hcCCHHHHHHHH
Confidence 467776665543
No 19
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.95 E-value=7.4e-28 Score=245.16 Aligned_cols=266 Identities=14% Similarity=0.094 Sum_probs=185.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|++. ...+.+.++++..++|++.+.|+... ......+. ... ....+.+.+|.++++|
T Consensus 85 ~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~---~~~----~~~~~~~~~d~ii~~s 149 (384)
T 1vgv_A 85 FKPDVVLVHGDT--TTTLATSLAAFYQRIPVGHVEAGLRT------GDLYSPWP---EEA----NRTLTGHLAMYHFSPT 149 (384)
T ss_dssp HCCSEEEEETTC--HHHHHHHHHHHTTTCCEEEESCCCCC------SCTTSSTT---HHH----HHHHHHTTCSEEEESS
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccccc------ccccCCCc---hHh----hHHHHHhhccEEEcCc
Confidence 799999999731 22334445667789999988887531 00001111 111 0223456799999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCC-CCCCC----hHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ-PPEF-FHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~-~~~~-f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
+..++.+.+ +|.+ +.+++|+ .... +.+.. ...+.++
T Consensus 150 ~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~---------------------------------- 194 (384)
T 1vgv_A 150 ETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSEL---------------------------------- 194 (384)
T ss_dssp HHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHH----------------------------------
T ss_pred HHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHH----------------------------------
Confidence 999998865 4764 8889987 2111 11000 0000011
Q ss_pred cccccccc-cCCCCCeEEEEEecCCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE
Q 011690 251 SLAGIDVF-LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 328 (479)
Q Consensus 251 ~~~~~~~~-~~~~~~~~i~~~g~~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv 328 (479)
+..++ ++++++.+++++||+.+. ||++.+++|+..+.++ .|+++|+++
T Consensus 195 ---~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~ 244 (384)
T 1vgv_A 195 ---AANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYP 244 (384)
T ss_dssp ---HTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEE
T ss_pred ---HHhccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEE
Confidence 11233 434556688899999876 9999999999999876 789999886
Q ss_pred -ecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC-ccc
Q 011690 329 -GKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCI 405 (479)
Q Consensus 329 -G~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~-~~~ 405 (479)
|.|+ ..+.+++.+. ..++|.|+|. ++.+++..+|++||++|+| | |..++|||+||+|||+++. ++.
T Consensus 245 ~g~~~~~~~~l~~~~~--~~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---S-----g~~~lEA~a~G~PvI~~~~~~~~ 313 (384)
T 1vgv_A 245 VHLNPNVREPVNRILG--HVKNVILIDP-QEYLPFVWLMNHAWLILTD---S-----GGIQEEAPSLGKPVLVMRDTTER 313 (384)
T ss_dssp CCBCHHHHHHHHHHHT--TCTTEEEECC-CCHHHHHHHHHHCSEEEES---S-----STGGGTGGGGTCCEEEESSCCSC
T ss_pred cCCCHHHHHHHHHHhh--cCCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----cchHHHHHHcCCCEEEccCCCCc
Confidence 5443 3344444332 1368999996 8889999999999999998 3 2248999999999999986 899
Q ss_pred hhccccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHH
Q 011690 406 EELVKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 461 (479)
Q Consensus 406 ~e~i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 461 (479)
+|+++++ +|+++ .|+++|+++|.++++ |++.+++|++++++....++|+..
T Consensus 314 ~e~v~~g-~g~lv~~d~~~la~~i~~ll~----d~~~~~~~~~~~~~~~~~~~~~~i 365 (384)
T 1vgv_A 314 PEAVTAG-TVRLVGTDKQRIVEEVTRLLK----DENEYQAMSRAHNPYGDGQACSRI 365 (384)
T ss_dssp HHHHHHT-SEEEECSSHHHHHHHHHHHHH----CHHHHHHHHSSCCTTCCSCHHHHH
T ss_pred chhhhCC-ceEEeCCCHHHHHHHHHHHHh----ChHHHhhhhhccCCCcCCCHHHHH
Confidence 9999888 99999 589999999999999 588999999888765434444433
No 20
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=7e-27 Score=251.13 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=194.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||.++....... ++.++ ....|++++||++.... .. .+ ..+..+|.++++|
T Consensus 281 ~~~Div~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~---------~~----~~--------~~~~~~d~~i~~s 336 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGGR-PEVFA--LRPAPVQVNWLAYPGTS---------GA----PW--------MDYVLGDAFALPP 336 (568)
T ss_dssp TTCSEEEECSSCTTCSS-CHHHH--TCCSSEEEEESSSSSCC---------CC----TT--------CCEEEECTTTSCT
T ss_pred CCCCEEEECCCCCCcch-HHHHh--cCCCceeEeeecCCccc---------CC----CC--------ceEEEECCCcCCc
Confidence 89999998764322211 12222 23568888888754110 00 00 1123588889999
Q ss_pred HHHHHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccccccc
Q 011690 180 QAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 259 (479)
Q Consensus 180 ~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (479)
+...+ ++.++.+|||. |.+........ .. ..+..+++
T Consensus 337 ~~~~~-----~~~~i~~ipn~----~~~~~~~~~~~------------------------------~~----~~r~~~~~ 373 (568)
T 2vsy_A 337 ALEPF-----YSEHVLRLQGA----FQPSDTSRVVA------------------------------EP----PSRTQCGL 373 (568)
T ss_dssp TTGGG-----CSSEEEECSSC----SCCCCTTCCCC------------------------------CC----CCTGGGTC
T ss_pred ccccC-----CcceeEcCCCc----CCCCCCCCCCC------------------------------CC----CCccccCC
Confidence 87653 45668999984 32221000000 00 02234455
Q ss_pred CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEe-cCCChHHHH
Q 011690 260 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYE 338 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG-~G~~~~~l~ 338 (479)
+++. +++++|++.+ ||++.+++|+..+.++ .|+++|+|+| +|+..+.++
T Consensus 374 ~~~~--~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~ 423 (568)
T 2vsy_A 374 PEQG--VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLR 423 (568)
T ss_dssp CTTS--CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHH
T ss_pred CCCC--EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHH
Confidence 4443 4559999999 9999999999999876 8999999999 999999999
Q ss_pred HHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEE-------ecCc------
Q 011690 339 EKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA-------VSYS------ 403 (479)
Q Consensus 339 ~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIa-------s~~~------ 403 (479)
+.++++|+ ++|.|+|. ++.+++..+|+.||++|+| |.. ++|++++|||+||+|||+ |+.+
T Consensus 424 ~~~~~~~l~~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~ 498 (568)
T 2vsy_A 424 AFAHAQGVDAQRLVFMPK-LPHPQYLARYRHADLFLDT---HPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH 498 (568)
T ss_dssp HHHHHTTCCGGGEEEECC-CCHHHHHHHGGGCSEEECC---SSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH
T ss_pred HHHHHcCCChhHEEeeCC-CCHHHHHHHHhcCCEEeeC---CCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH
Confidence 99999998 47999997 9999999999999999998 544 899999999999999999 9999
Q ss_pred -cchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh---hhhchHHHHHHHHHHHHHHHHhhc
Q 011690 404 -CIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG---LSARWATEWEEHAKPLITEVISQF 477 (479)
Q Consensus 404 -~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~ 477 (479)
|.+|++.+ |++++++++.++++ |++.++.|++++++.. ..++|+...+ .+..+++++++++
T Consensus 499 ~g~~e~v~~--------~~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 499 LGLDEMNVA--------DDAAFVAKAVALAS----DPAALTALHARVDVLRRASGVFHMDGFAD-DFGALLQALARRH 563 (568)
T ss_dssp HTCGGGBCS--------SHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHH-HHHHHHHHHHHTT
T ss_pred CCChhhhcC--------CHHHHHHHHHHHhc----CHHHHHHHHHHHHHhhhcCCCCCHHHHHH-HHHHHHHHHHHHH
Confidence 99998855 89999999999999 6999999999988754 5688877765 4566777776653
No 21
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.93 E-value=1.6e-25 Score=202.12 Aligned_cols=160 Identities=13% Similarity=0.267 Sum_probs=140.6
Q ss_pred CeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHH
Q 011690 264 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 343 (479)
Q Consensus 264 ~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~ 343 (479)
|.+|+++|++.+.||++.+++|+..+++ .|+++|+|+|+|+..+.+++.+++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~ 53 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK 53 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence 4689999999999999999999998842 578999999999999999999999
Q ss_pred cCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC-cEEE-ecCccchhccccCccEEEeCCH
Q 011690 344 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCA-VSYSCIEELVKVDKNGLLFSSS 421 (479)
Q Consensus 344 ~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~-PVIa-s~~~~~~e~i~~~~~G~l~~~~ 421 (479)
+++ +|.| |. ++.+++..+|++||++|+| |..|++|++++|||+||+ |||+ ++.++..+++.++.+.+...|+
T Consensus 54 ~~~-~v~~-g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~ 127 (166)
T 3qhp_A 54 LGV-KAEF-GF-VNSNELLEILKTCTLYVHA---ANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNA 127 (166)
T ss_dssp HTC-EEEC-CC-CCHHHHHHHHTTCSEEEEC---CCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCH
T ss_pred cCC-eEEE-ee-cCHHHHHHHHHhCCEEEEC---CcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCH
Confidence 987 8999 96 9999999999999999999 667999999999999998 9999 4688999999888774444789
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHH
Q 011690 422 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 461 (479)
Q Consensus 422 ~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 461 (479)
++++++|.++++ +++.++.+++++++....++|+..
T Consensus 128 ~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~ 163 (166)
T 3qhp_A 128 KDLSAKIDWWLE----NKLERERMQNEYAKSALNYTLENS 163 (166)
T ss_dssp HHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHCChhhh
Confidence 999999999999 699999999999986667777654
No 22
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.93 E-value=3.7e-24 Score=232.25 Aligned_cols=340 Identities=15% Similarity=0.078 Sum_probs=213.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHH-hcCCcEEEEecCchhhhhhhhcCCCch---hHH------HH--HHHhHHHHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSH---FVS------IY--RCFSVLRIEKY 167 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~-~~~~~~ii~~h~~~~~~~~~~~~~~~~---~~~------~~--~~~~~~~~e~~ 167 (479)
.+||++|+|. +.+..+..+++. ..++|+|+|.|+..+...-...+.... +.. .. ..+.....|+.
T Consensus 180 ~~pdIiH~HD---W~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHE---WLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEES---GGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCc---hhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 4599999999 766666666654 558999999998742111000010000 000 00 00011234788
Q ss_pred HhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCCCCCChH--HHHHHHHhhhhcccCCCCccccccccccCCcc
Q 011690 168 YGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 243 (479)
Q Consensus 168 ~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (479)
....||.++|||+.+++++...++.+ -.+|+|| +.+.|.|.... .+.....++...
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~-------------------- 316 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDF-------------------- 316 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHH--------------------
T ss_pred HHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHH--------------------
Confidence 88899999999999999998877665 3449999 88999886321 111111121100
Q ss_pred cccchhccccccccccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCC----------C----------
Q 011690 244 ADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDD----------S---------- 302 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~----------~---------- 302 (479)
++.-..+.+++.+++..++..+||++ .+||++.+++|+..+..++... +.+- -
T Consensus 317 -----l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~-~~~~~vvafii~p~~~~~~~~~~l~ 390 (725)
T 3nb0_A 317 -----VRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVS-GSKKTVVAFIVMPAKNNSFTVEALK 390 (725)
T ss_dssp -----HHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHT-TCCCEEEEEEECCCCEEEECHHHHH
T ss_pred -----HHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhc-cCCCcEEEEEEeCCCCCCCchhhhc
Confidence 00001112234444555677789999 7899999999999998763221 0000 0
Q ss_pred ----------------------------------------chhhhhHhh------------hccCcccCCCCE-EEEEEe
Q 011690 303 ----------------------------------------TNEEVFLKE------------ISDGKQYLYPRL-LFIITG 329 (479)
Q Consensus 303 ----------------------------------------~~~~~~~~~------------~~~~~~~~~p~~-~l~IvG 329 (479)
++.++.+.. .++-. ...|.+ .-.++
T Consensus 391 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~-~~lpp~~TH~~~- 468 (725)
T 3nb0_A 391 GQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPE-GQLPPIVTHNMV- 468 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCT-TCCCCSBSEEET-
T ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCC-CCCCCeeeeecc-
Confidence 011111110 00000 011111 11111
Q ss_pred cCCChHHHHHHHHHcCC-Cc------EEEecCCCCcc------hHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCc
Q 011690 330 KGPDKESYEEKIRRLRL-KR------VAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 396 (479)
Q Consensus 330 ~G~~~~~l~~~~~~~~l-~~------V~f~G~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~P 396 (479)
....+.+...++++++ ++ |.|.+.|++.+ ++.++|+.||++|+| |..|+||++++||||||+|
T Consensus 469 -~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~P---S~~EgfGl~~LEAmA~G~P 544 (725)
T 3nb0_A 469 -DDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFP---SYYEPWGYTPAECTVMGVP 544 (725)
T ss_dssp -TGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECC---CSSBSSCHHHHHHHHTTCC
T ss_pred -cCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEec---cccCCCCHHHHHHHHcCCC
Confidence 1234567777888887 43 78888789887 599999999999999 7789999999999999999
Q ss_pred EEEecCccchhccccC-------ccEEEeC-----CHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHhhhhhchHHHHH
Q 011690 397 VCAVSYSCIEELVKVD-------KNGLLFS-----SSSELADQLLMLFKGFP-DDSDVLKKLRNGTLEMGLSARWATEWE 463 (479)
Q Consensus 397 VIas~~~~~~e~i~~~-------~~G~l~~-----~~~~la~~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~w~~~~~ 463 (479)
||+|+.+|.+|.+.++ .+|+++. ++++++++|.+++..+- .++..+..++++++++...++|+...+
T Consensus 545 vI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~ 624 (725)
T 3nb0_A 545 SITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGL 624 (725)
T ss_dssp EEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHH
T ss_pred EEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999998875 3698772 35555555544443110 167888999999998888899988876
Q ss_pred HHHHHHHHHHHh
Q 011690 464 EHAKPLITEVIS 475 (479)
Q Consensus 464 ~~~~~~~~~~~~ 475 (479)
++ ..++++++.
T Consensus 625 ~Y-l~~Ye~aL~ 635 (725)
T 3nb0_A 625 EY-VKARQLALR 635 (725)
T ss_dssp HH-HHHHHHHHH
T ss_pred HH-HHHHHHHHh
Confidence 54 445566553
No 23
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.93 E-value=4.2e-25 Score=224.68 Aligned_cols=265 Identities=15% Similarity=0.091 Sum_probs=180.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|+++ ...+.+.++++..++|++...|+.. + ......+.. ... ++.+.+.+|.++++|
T Consensus 90 ~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~-~-----~~~~~~~~~--~~~-----~~~~~~~~~~~~~~s 154 (376)
T 1v4v_A 90 MGADYVLVHGDT--LTTFAVAWAAFLEGIPVGHVEAGLR-S-----GNLKEPFPE--EAN-----RRLTDVLTDLDFAPT 154 (376)
T ss_dssp TTCSEEEEESSC--HHHHHHHHHHHHTTCCEEEETCCCC-C-----SCTTSSTTH--HHH-----HHHHHHHCSEEEESS
T ss_pred cCCCEEEEeCCh--HHHHHHHHHHHHhCCCEEEEeCCCc-c-----ccccCCCch--HHH-----HHHHHHHhceeeCCC
Confidence 799999999742 2333445567778999764333321 0 000011111 111 345556799999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+..++.+.+. |++ +.+++|+..+.+... . .. .. .+..
T Consensus 155 ~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~---~-~~--~~---------------------------------~~~~ 194 (376)
T 1v4v_A 155 PLAKANLLKE-GKREEGILVTGQTGVDAVLLA---A-KL--GR---------------------------------LPEG 194 (376)
T ss_dssp HHHHHHHHTT-TCCGGGEEECCCHHHHHHHHH---H-HH--CC---------------------------------CCTT
T ss_pred HHHHHHHHHc-CCCcceEEEECCchHHHHhhh---h-hh--hH---------------------------------HHHh
Confidence 9999988765 764 778887511111000 0 00 00 0111
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCC-Ch
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DK 334 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~-~~ 334 (479)
+ ++++.+++++||+...||++.+++|++.+.++ +|+++++++ |+|+ ..
T Consensus 195 --~-~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~ 244 (376)
T 1v4v_A 195 --L-PEGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVR 244 (376)
T ss_dssp --C-CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHH
T ss_pred --c-CCCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHH
Confidence 1 13455778899998888999999999999775 788998886 7665 45
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCccchhccccCc
Q 011690 335 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDK 413 (479)
Q Consensus 335 ~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~~~~e~i~~~~ 413 (479)
+.+++.+. ..++|.|+|. +...++..+|++||++|+| | + + .++|||+||+|||++ +.++..++++++
T Consensus 245 ~~l~~~~~--~~~~v~~~g~-~g~~~~~~~~~~ad~~v~~---S--~--g-~~lEA~a~G~PvI~~~~~~~~~~~~~~g- 312 (376)
T 1v4v_A 245 EAVFPVLK--GVRNFVLLDP-LEYGSMAALMRASLLLVTD---S--G--G-LQEEGAALGVPVVVLRNVTERPEGLKAG- 312 (376)
T ss_dssp HHHHHHHT--TCTTEEEECC-CCHHHHHHHHHTEEEEEES---C--H--H-HHHHHHHTTCCEEECSSSCSCHHHHHHT-
T ss_pred HHHHHHhc--cCCCEEEECC-CCHHHHHHHHHhCcEEEEC---C--c--C-HHHHHHHcCCCEEeccCCCcchhhhcCC-
Confidence 55655543 2368999986 7777999999999999987 3 2 2 378999999999998 478888987654
Q ss_pred cEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 011690 414 NGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 469 (479)
Q Consensus 414 ~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 469 (479)
+|+++ .|+++|+++|.++++ |++.+++|++++. .+.|...++++++.+
T Consensus 313 ~g~lv~~d~~~la~~i~~ll~----d~~~~~~~~~~~~----~~~~~~~~~~i~~~i 361 (376)
T 1v4v_A 313 ILKLAGTDPEGVYRVVKGLLE----NPEELSRMRKAKN----PYGDGKAGLMVARGV 361 (376)
T ss_dssp SEEECCSCHHHHHHHHHHHHT----CHHHHHHHHHSCC----SSCCSCHHHHHHHHH
T ss_pred ceEECCCCHHHHHHHHHHHHh----ChHhhhhhcccCC----CCCCChHHHHHHHHH
Confidence 89999 789999999999999 5888888886443 345555555544433
No 24
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.92 E-value=2.2e-24 Score=200.12 Aligned_cols=151 Identities=20% Similarity=0.252 Sum_probs=138.3
Q ss_pred EEEEEecCC-CCCCHHHHHHHHHHhH--HHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC--ChHHHHHH
Q 011690 266 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 340 (479)
Q Consensus 266 ~i~~~g~~~-~~K~~~~lieA~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~--~~~~l~~~ 340 (479)
+++++|++. +.||++.+++|+..+. ++ .|+++|+|+|.|+ ..+.+++.
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~---------------------------~~~~~l~i~G~~~~~~~~~l~~~ 90 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKE---------------------------FQEMRFIIIGKGDPELEGWARSL 90 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGG---------------------------GGGEEEEEECCBCHHHHHHHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhcc---------------------------CCCeEEEEECCCChHHHHHHHHH
Confidence 899999999 9999999999999986 43 6899999999999 88899999
Q ss_pred HHHcCCCcEEE-ecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeC
Q 011690 341 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 419 (479)
Q Consensus 341 ~~~~~l~~V~f-~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~ 419 (479)
+++++ +|.| .|. ++.+++..+|+.||++|+| +..+++|++++|||+||+|||+++.++..|++ ++.+|++++
T Consensus 91 ~~~~~--~v~~~~g~-~~~~~~~~~~~~ad~~l~p---s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~ 163 (200)
T 2bfw_A 91 EEKHG--NVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVK 163 (200)
T ss_dssp HHHCT--TEEEECSC-CCHHHHHHHHTTCSEEEEC---CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEEC
T ss_pred HHhcC--CEEEEecc-CCHHHHHHHHHHCCEEEEC---CCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEec
Confidence 99887 8999 997 9999999999999999998 55689999999999999999999999999999 999999994
Q ss_pred --CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 --~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
++++++++|.++++. +++.++++++++++..
T Consensus 164 ~~~~~~l~~~i~~l~~~---~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 164 AGDPGELANAILKALEL---SRSDLSKFRENCKKRA 196 (200)
T ss_dssp TTCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 899999999999992 3889999999998843
No 25
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.91 E-value=7.8e-24 Score=217.98 Aligned_cols=198 Identities=17% Similarity=0.127 Sum_probs=152.0
Q ss_pred HHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcc
Q 011690 165 EKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 243 (479)
Q Consensus 165 e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (479)
.+.+++.+|.++++|+.+++.+.+. |++ +.+++|+. |.+.... +.
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~~-g~~ki~vi~n~~---f~~~~~~-~~----------------------------- 192 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKTF-GAKRVFSCGNLK---FICQKGK-GI----------------------------- 192 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHTT-TCCSEEECCCGG---GCCCCCS-CC-----------------------------
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCCeEEEcCCCc---cCCCcCh-hh-----------------------------
Confidence 4455678999999999999988765 765 88999862 2221100 00
Q ss_pred cccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCE
Q 011690 244 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 323 (479)
.+ ..+ ++++++++ .||++.+++|++.+.++ +|++
T Consensus 193 --------------~l--~~~-vi~~~~~~--~k~~~~ll~A~~~l~~~---------------------------~p~~ 226 (374)
T 2xci_A 193 --------------KL--KGE-FIVAGSIH--TGEVEIILKAFKEIKKT---------------------------YSSL 226 (374)
T ss_dssp --------------CC--SSC-EEEEEEEC--GGGHHHHHHHHHHHHTT---------------------------CTTC
T ss_pred --------------hh--cCC-EEEEEeCC--CchHHHHHHHHHHHHhh---------------------------CCCc
Confidence 01 113 55666654 58999999999998764 8999
Q ss_pred EEEEEecCCCh-HHHHHHHHHcCCC---------cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhC
Q 011690 324 LFIITGKGPDK-ESYEEKIRRLRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 393 (479)
Q Consensus 324 ~l~IvG~G~~~-~~l~~~~~~~~l~---------~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~ 393 (479)
+|+|+|+|+.+ +.+++.++++++. +|.|.|. .+|++.+|+.||++++|+ |..+.+|.+++|||||
T Consensus 227 ~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~---~~dl~~~y~~aDv~vl~s--s~~e~gg~~~lEAmA~ 301 (374)
T 2xci_A 227 KLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDR---FGILKELYPVGKIAIVGG--TFVNIGGHNLLEPTCW 301 (374)
T ss_dssp EEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCS---SSCHHHHGGGEEEEEECS--SSSSSCCCCCHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECC---HHHHHHHHHhCCEEEECC--cccCCCCcCHHHHHHh
Confidence 99999999987 5899999998874 5788886 789999999999999872 3335577899999999
Q ss_pred CCcEEEe-cCccchhccccC-ccEEE--eCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 394 GLPVCAV-SYSCIEELVKVD-KNGLL--FSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 394 G~PVIas-~~~~~~e~i~~~-~~G~l--~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|+|||++ +.++.+|++++. .+|++ ++|+++|+++|.++++ | +.+++|++++++.
T Consensus 302 G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~----d-~~r~~mg~~ar~~ 359 (374)
T 2xci_A 302 GIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLS----V-KKEIKVEEKSREI 359 (374)
T ss_dssp TCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHH----S-CCCCCHHHHHHHH
T ss_pred CCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHh----H-HHHHHHHHHHHHH
Confidence 9999986 678888877542 34444 4789999999999999 6 6777888888873
No 26
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.91 E-value=3.8e-23 Score=210.74 Aligned_cols=259 Identities=12% Similarity=0.049 Sum_probs=183.8
Q ss_pred hcCCCcEEEEeCCCCcchHHHHHHHHHh--cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEE
Q 011690 98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGC 175 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~~~~~~~~~~--~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 175 (479)
+..++|+|++++|+.....+.+.+++++ .++|+|+..|+.. ++.. . .+. ... ..|+.+++.||.+
T Consensus 71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~-pl~~---~-~~~---~~~-----~~E~~~y~~aD~I 137 (339)
T 3rhz_A 71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVV-PLMF---S-GNF---YLM-----DRTIAYYNKADVV 137 (339)
T ss_dssp TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCH-HHHC---G-GGG---GGH-----HHHHHHHTTCSEE
T ss_pred cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccH-HhhC---c-cch---hhH-----HHHHHHHHHCCEE
Confidence 4578999999998754443434444443 3899999999985 3211 1 111 111 2389999999999
Q ss_pred EEeCHHHHHHHHHhhCCe-EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 176 LCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 176 i~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
++.|+.+++.+.+. |++ ..+++.+..+...+.+.
T Consensus 138 i~~S~~~~~~l~~~-G~~~~ki~~~~~~~~~~~~~~-------------------------------------------- 172 (339)
T 3rhz_A 138 VAPSQKMIDKLRDF-GMNVSKTVVQGMWDHPTQAPM-------------------------------------------- 172 (339)
T ss_dssp EESCHHHHHHHHHT-TCCCSEEEECCSCCCCCCCCC--------------------------------------------
T ss_pred EECCHHHHHHHHHc-CCCcCceeecCCCCccCcccc--------------------------------------------
Confidence 99999999999876 766 33333321011001000
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
.. +.....++|+|++..... +.+ -.++++|+|+|+|+..
T Consensus 173 ---~~-~~~~~~i~yaG~l~k~~~----------L~~---------------------------l~~~~~f~ivG~G~~~ 211 (339)
T 3rhz_A 173 ---FP-AGLKREIHFPGNPERFSF----------VKE---------------------------WKYDIPLKVYTWQNVE 211 (339)
T ss_dssp ---CC-CEEEEEEEECSCTTTCGG----------GGG---------------------------CCCSSCEEEEESCCCC
T ss_pred ---cc-cCCCcEEEEeCCcchhhH----------HHh---------------------------CCCCCeEEEEeCCccc
Confidence 00 111248999999984211 110 0368999999999864
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-----CCCCCcHHHHHHHhCCCcEEEecCccchhcc
Q 011690 335 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-----SGLDLPMKVVDMFGCGLPVCAVSYSCIEELV 409 (479)
Q Consensus 335 ~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-----~~e~~p~~llEama~G~PVIas~~~~~~e~i 409 (479)
.++||.|+|. +|.++++.+++++|+++++ .+. ....+|.|++||||||+|||+++.++..+++
T Consensus 212 ----------~l~nV~f~G~-~~~~el~~~l~~~~~~lv~-~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v 279 (339)
T 3rhz_A 212 ----------LPQNVHKINY-RPDEQLLMEMSQGGFGLVW-MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELI 279 (339)
T ss_dssp ----------CCTTEEEEEC-CCHHHHHHHHHTEEEEECC-CCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHH
T ss_pred ----------CcCCEEEeCC-CCHHHHHHHHHhCCEEEEE-CCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHH
Confidence 2359999996 9999999999999999985 111 1135799999999999999999999999999
Q ss_pred ccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 011690 410 KVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 410 ~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 473 (479)
+++.+|+++++.++++++|..+. ++.+++|++|+++.....+|..--++.+.+.+.++
T Consensus 280 ~~~~~G~~~~~~~e~~~~i~~l~------~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 280 ENNGLGWIVKDVEEAIMKVKNVN------EDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQA 337 (339)
T ss_dssp HHHTCEEEESSHHHHHHHHHHCC------HHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred HhCCeEEEeCCHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 99999999999999999888652 56789999999997767777666666555555444
No 27
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.91 E-value=1.1e-22 Score=216.54 Aligned_cols=159 Identities=8% Similarity=0.072 Sum_probs=126.1
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC----CEEEEEEecC-----CC--
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKG-----PD-- 333 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~l~IvG~G-----~~-- 333 (479)
.+|+++||+.+.||++.+|+|+..+.++ +| +++|+++|.+ +.
T Consensus 256 ~vil~VgRl~~~Kgi~~ll~A~~~ll~~---------------------------~p~~~~~v~Lv~vG~p~~~~~~~~~ 308 (482)
T 1uqt_A 256 QNIFSVERLDYSKGLPERFLAYEALLEK---------------------------YPQHHGKIRYTQIAPTSRGDVQAYQ 308 (482)
T ss_dssp EEEEEECCBCGGGCHHHHHHHHHHHHHH---------------------------CGGGTTTEEEEEECCBCSTTSHHHH
T ss_pred EEEEEEeCCcccCCHHHHHHHHHHHHHh---------------------------CccccCcEEEEEEECCCccchHHHH
Confidence 4899999999999999999999998775 54 4889999953 32
Q ss_pred --hHHHHHHHHHcC-------CCcEEE-ecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC-----cEE
Q 011690 334 --KESYEEKIRRLR-------LKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVC 398 (479)
Q Consensus 334 --~~~l~~~~~~~~-------l~~V~f-~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~-----PVI 398 (479)
++++++.+.+++ ...|.| .|. ++.+++..+|++||++|+| |..||||++++||||||+ |+|
T Consensus 309 ~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~-v~~~el~~ly~~ADv~v~p---S~~EGfgLv~lEAmA~g~~~~~gpvV 384 (482)
T 1uqt_A 309 DIRHQLENEAGRINGKYGQLGWTPLYYLNQH-FDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLV 384 (482)
T ss_dssp HHHHHHHHHHHHHHHHHCBTTBCSEEEECSC-CCHHHHHHHHHHCSEEEEC---CSSBSCCHHHHHHHHHSCTTSCCEEE
T ss_pred HHHHHHHHHHHHHhhhcccCCCceEEEeCCC-CCHHHHHHHHHHccEEEEC---CCcccCCchHHHHHHhCCCCCCCCEE
Confidence 233444444432 224776 465 9999999999999999999 778999999999999997 999
Q ss_pred EecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHH
Q 011690 399 AVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460 (479)
Q Consensus 399 as~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 460 (479)
+|+.+|..+.+. +|+++ .|++++|++|.+++++ ++++++.+.+++++....++|+.
T Consensus 385 ~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~---~~~~r~~~~~~~~~~v~~~s~~~ 442 (482)
T 1uqt_A 385 LSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVIVKNDINH 442 (482)
T ss_dssp EETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHTCHHH
T ss_pred EECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCHHH
Confidence 999877777772 78999 4799999999999985 56778788777776554555543
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.90 E-value=1.7e-23 Score=192.22 Aligned_cols=154 Identities=21% Similarity=0.193 Sum_probs=136.2
Q ss_pred ccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHH
Q 011690 258 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 337 (479)
Q Consensus 258 ~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l 337 (479)
.++.+++ +++++|++.+.||++.+++|+..+ |+++|+|+|.|+..+.+
T Consensus 18 ~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~l 65 (177)
T 2f9f_A 18 KFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHA 65 (177)
T ss_dssp CCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTH
T ss_pred ccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHHH
Confidence 4556666 789999999999999999999864 56899999999998999
Q ss_pred HHHHH--HcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCcc
Q 011690 338 EEKIR--RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 414 (479)
Q Consensus 338 ~~~~~--~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~ 414 (479)
++.++ ++++ ++|.|.|. ++.+++..+|++||++|+| +..+++|++++|||+||+|||+++.++..|+++++.+
T Consensus 66 ~~~~~~~~~~l~~~v~~~g~-~~~~e~~~~~~~adi~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~ 141 (177)
T 2f9f_A 66 ERYARKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLCT---AKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKT 141 (177)
T ss_dssp HHHHHHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTT
T ss_pred HHHHHhhhcccCCcEEEeCC-CCHHHHHHHHHhCCEEEeC---CCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCc
Confidence 99999 7788 68999996 9999999999999999998 5678899999999999999999999999999999999
Q ss_pred EEEe-CCHHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHH
Q 011690 415 GLLF-SSSSELADQLLMLFKGFPDDSDV-LKKLRNGTLE 451 (479)
Q Consensus 415 G~l~-~~~~~la~~l~~l~~~~~~~~~~-~~~~~~~~~~ 451 (479)
|+++ .|+++++++|.+++++ ++. ++++++++++
T Consensus 142 g~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 142 GYLVNADVNEIIDAMKKVSKN----PDKFKKDCFRRAKE 176 (177)
T ss_dssp EEEECSCHHHHHHHHHHHHHC----TTTTHHHHHHHHHT
T ss_pred cEEeCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHhc
Confidence 9998 7799999999999995 333 5666666654
No 29
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.85 E-value=7.4e-19 Score=186.69 Aligned_cols=274 Identities=10% Similarity=-0.014 Sum_probs=181.3
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhhcCCCchhHHHHHH-HhHHHHHHHHhhcCCEEEEe
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRC-FSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~ad~vi~v 178 (479)
.-|+|.+|. +....+..+++.. .+.++.+-+|....+ ..+++..-+ + ...+-+.+ -.||.|.+.
T Consensus 149 ~~D~VwVhD---YhL~llp~~lR~~~~~~~igfFlHiPfPs---------~e~f~~Lp~~~-r~ell~gl-l~~DligF~ 214 (496)
T 3t5t_A 149 ADPVYLVHD---YQLVGVPALLREQRPDAPILLFVHIPWPS---------ADYWRILPKEI-RTGILHGM-LPATTIGFF 214 (496)
T ss_dssp SSCEEEEES---GGGTTHHHHHHHHCTTSCEEEECCSCCCC---------HHHHTTSCHHH-HHHHHHHH-TTSSEEEES
T ss_pred CCCEEEEeC---ccHhHHHHHHHhhCCCCeEEEEEcCCCCC---------HHHHhhCcHhH-HHHHHHHH-HhCCEEEEe
Confidence 468999999 5555555666554 467888888864211 111110000 0 00011122 469999999
Q ss_pred CHHHHHHHHHh----h-C--------------C--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccc
Q 011690 179 TQAMQHELAQN----W-G--------------I--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN 236 (479)
Q Consensus 179 S~~~~~~l~~~----~-~--------------~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (479)
+......+.+. . | . ++.++|+| |++.|.+...+.+.++..+
T Consensus 215 t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~----------------- 277 (496)
T 3t5t_A 215 ADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEW----------------- 277 (496)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHH-----------------
T ss_pred cHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHH-----------------
Confidence 98777654431 2 2 1 26789999 8777866532111122222
Q ss_pred cccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCc
Q 011690 237 AGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 316 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (479)
++ ++ .+|+++||+.+.||++.+|+|+ .+.++
T Consensus 278 --------------------~~---~~-~lIl~VgRLd~~KGi~~lL~Af-~ll~~------------------------ 308 (496)
T 3t5t_A 278 --------------------AD---GH-RLVVHSGRTDPIKNAERAVRAF-VLAAR------------------------ 308 (496)
T ss_dssp --------------------HT---TS-EEEEEEEESSGGGCHHHHHHHH-HHHHH------------------------
T ss_pred --------------------hC---Cc-eEEEEcccCccccCHHHHHHHH-HHHHh------------------------
Confidence 11 33 4899999999999999999999 77665
Q ss_pred ccCCCC---EEEEEEe-----cCCChHHHHH----HHHHcCC----CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCC
Q 011690 317 QYLYPR---LLFIITG-----KGPDKESYEE----KIRRLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 380 (479)
Q Consensus 317 ~~~~p~---~~l~IvG-----~G~~~~~l~~----~~~~~~l----~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~ 380 (479)
+|+ +.|+++| +|+..+.+++ .+.+++. ..|.|+|. ++.+++..+|+.||++|+| |..
T Consensus 309 ---~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~-v~~~el~aly~~ADv~vv~---Slr 381 (496)
T 3t5t_A 309 ---GGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDND-NDVNHTIACFRRADLLIFN---STV 381 (496)
T ss_dssp ---TSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEC-CCHHHHHHHHHHCSEEEEC---CSS
T ss_pred ---CcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCC-CCHHHHHHHHHhccEEEEC---ccc
Confidence 564 6788886 3333334444 4444332 26999998 9999999999999999998 777
Q ss_pred CCCcHHHHHHHhCC---CcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhh
Q 011690 381 LDLPMKVVDMFGCG---LPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS 455 (479)
Q Consensus 381 e~~p~~llEama~G---~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
||||++++|||||| .|+|+|..+|..+.+ +.+|+++ .|++++|++|.++++. .+++++.+.+..++....
T Consensus 382 EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~V~~ 456 (496)
T 3t5t_A 382 DGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAISAALAA---GPRQRAEAAARRRDAARP 456 (496)
T ss_dssp BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHTT
T ss_pred ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHH
Confidence 99999999999997 899999988887777 3479999 4699999999999996 456666665555554323
Q ss_pred ---hchHHHHHHHH
Q 011690 456 ---ARWATEWEEHA 466 (479)
Q Consensus 456 ---~~w~~~~~~~~ 466 (479)
..|.+..-+.+
T Consensus 457 ~d~~~W~~~fl~~L 470 (496)
T 3t5t_A 457 WTLEAWVQAQLDGL 470 (496)
T ss_dssp CBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 34554444333
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.84 E-value=7.9e-20 Score=189.61 Aligned_cols=255 Identities=15% Similarity=0.131 Sum_probs=171.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchh-HHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|++++. ....+.+.++++..++|++...++.. + +....++ .... .+.+.+.+|.+++.
T Consensus 110 ~kPDvVi~~g~--~~~~~~~~~aa~~~~IPv~h~~ag~r-s-----~~~~~~~~~~~~--------r~~~~~~a~~~~~~ 173 (396)
T 3dzc_A 110 EQPDVVLVHGD--TATTFAASLAAYYQQIPVGHVEAGLR-T-----GNIYSPWPEEGN--------RKLTAALTQYHFAP 173 (396)
T ss_dssp HCCSEEEEETT--SHHHHHHHHHHHTTTCCEEEETCCCC-C-----SCTTSSTTHHHH--------HHHHHHTCSEEEES
T ss_pred cCCCEEEEECC--chhHHHHHHHHHHhCCCEEEEECCcc-c-----cccccCCcHHHH--------HHHHHHhcCEEECC
Confidence 79999999983 23334445677788999764322221 0 0001111 1111 22345789999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChH--H----HHHHHHhhhhcccCCCCccccccccccCCcccccchh
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLE--E----KHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIF 249 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
|+..++.+.+. |++ +.++.|...+.+...... . +.++
T Consensus 174 se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~--------------------------------- 219 (396)
T 3dzc_A 174 TDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATL--------------------------------- 219 (396)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHH---------------------------------
T ss_pred CHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHH---------------------------------
Confidence 99999988775 775 778887511111100000 0 1111
Q ss_pred ccccccccc-cCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEE
Q 011690 250 TSLAGIDVF-LKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 327 (479)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~I 327 (479)
+..++ +.++++.++++.+|.. ..|+++.+++|+..+.++ +|++++++
T Consensus 220 ----r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~---------------------------~~~~~~v~ 268 (396)
T 3dzc_A 220 ----ESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQ---------------------------HPECQILY 268 (396)
T ss_dssp ----HHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH---------------------------CTTEEEEE
T ss_pred ----HHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh---------------------------CCCceEEE
Confidence 12234 3455666667776643 347899999999999876 88999988
Q ss_pred E-ecCCChHHHHHHHHH-cCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCc
Q 011690 328 T-GKGPDKESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYS 403 (479)
Q Consensus 328 v-G~G~~~~~l~~~~~~-~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~ 403 (479)
. |.++ .+++.+++ ++. ++|.|.++ +...++..+|+.||++|.+ | | + ..+|||++|+|||++ +.+
T Consensus 269 ~~g~~~---~~~~~l~~~~~~~~~v~~~~~-lg~~~~~~l~~~ad~vv~~---S-G---g-~~~EA~a~G~PvV~~~~~~ 336 (396)
T 3dzc_A 269 PVHLNP---NVREPVNKLLKGVSNIVLIEP-QQYLPFVYLMDRAHIILTD---S-G---G-IQEEAPSLGKPVLVMRETT 336 (396)
T ss_dssp ECCBCH---HHHHHHHHHTTTCTTEEEECC-CCHHHHHHHHHHCSEEEES---C-S---G-GGTTGGGGTCCEEECCSSC
T ss_pred EeCCCh---HHHHHHHHHHcCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-c---c-HHHHHHHcCCCEEEccCCC
Confidence 5 6553 23444444 243 68999997 8888999999999999987 3 3 2 348999999999999 688
Q ss_pred cchhccccCccEEEeC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 404 CIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 404 ~~~e~i~~~~~G~l~~-~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+.+|+++.| ++++++ ++++|++++.++++ +++.+++|++++..+
T Consensus 337 ~~~e~v~~G-~~~lv~~d~~~l~~ai~~ll~----d~~~~~~m~~~~~~~ 381 (396)
T 3dzc_A 337 ERPEAVAAG-TVKLVGTNQQQICDALSLLLT----DPQAYQAMSQAHNPY 381 (396)
T ss_dssp SCHHHHHHT-SEEECTTCHHHHHHHHHHHHH----CHHHHHHHHTSCCTT
T ss_pred cchHHHHcC-ceEEcCCCHHHHHHHHHHHHc----CHHHHHHHhhccCCC
Confidence 888998877 578884 69999999999999 588889998776553
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.83 E-value=4e-19 Score=184.87 Aligned_cols=251 Identities=17% Similarity=0.141 Sum_probs=169.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchh-HHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|++++. ....+.+.++++..++|++....+.. .+....++ .... .+.+.+.+|.+++.
T Consensus 113 ~kPD~Vi~~gd--~~~~l~~~laA~~~~IPv~h~~aglr------s~~~~~~~p~~~~--------r~~~~~~a~~~~~~ 176 (403)
T 3ot5_A 113 ENPDIVLVHGD--TTTSFAAGLATFYQQKMLGHVEAGLR------TWNKYSPFPEEMN--------RQLTGVMADIHFSP 176 (403)
T ss_dssp HCCSEEEEETT--CHHHHHHHHHHHHTTCEEEEESCCCC------CSCTTSSTTHHHH--------HHHHHHHCSEEEES
T ss_pred cCCCEEEEECC--chhHHHHHHHHHHhCCCEEEEECCcc------ccccccCCcHHHH--------HHHHHHhcCEEECC
Confidence 79999999983 22334445677788999653222111 00001011 1111 23455679999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC--CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
|+..++.+.+. |++ +.++.|. |...+.+... .+.+.+
T Consensus 177 se~~~~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~-~~~~~~------------------------------------ 218 (403)
T 3ot5_A 177 TKQAKENLLAE-GKDPATIFVTGNTAIDALKTTVQKD-YHHPIL------------------------------------ 218 (403)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHSCTT-CCCHHH------------------------------------
T ss_pred CHHHHHHHHHc-CCCcccEEEeCCchHHHHHhhhhhh-cchHHH------------------------------------
Confidence 99999988776 775 7777774 2111111100 000100
Q ss_pred ccccccCCCCCeEEEEEecCCC-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecC
Q 011690 254 GIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKG 331 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~~-~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G 331 (479)
.. + ++++.++++.+|... .|+++.+++|+..+.++ +|++++++. |.+
T Consensus 219 -~~--l-~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~ 267 (403)
T 3ot5_A 219 -EN--L-GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLN 267 (403)
T ss_dssp -HS--C-TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSC
T ss_pred -Hh--c-cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCC
Confidence 11 2 345666777777543 46789999999998876 899999887 444
Q ss_pred CChHHHHHHHHH-cCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCccchhc
Q 011690 332 PDKESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEEL 408 (479)
Q Consensus 332 ~~~~~l~~~~~~-~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~~~~e~ 408 (479)
+ .+++.+++ ++. ++|.+.|. +...++..+|+.||++|.+ | |...+|||++|+|+|++ +.++.+|.
T Consensus 268 ~---~~~~~l~~~~~~~~~v~l~~~-l~~~~~~~l~~~ad~vv~~---S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~ 335 (403)
T 3ot5_A 268 P---AVREKAMAILGGHERIHLIEP-LDAIDFHNFLRKSYLVFTD---S-----GGVQEEAPGMGVPVLVLRDTTERPEG 335 (403)
T ss_dssp H---HHHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHEEEEEEC---C-----HHHHHHGGGTTCCEEECCSSCSCHHH
T ss_pred H---HHHHHHHHHhCCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-----ccHHHHHHHhCCCEEEecCCCcchhh
Confidence 3 23444444 344 68999997 8888999999999999875 3 22448999999999999 68888898
Q ss_pred cccCccEEEeC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 409 VKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 409 i~~~~~G~l~~-~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
++.+ +|++++ |++++++++.++++ +++.+++|++++..+
T Consensus 336 v~~g-~~~lv~~d~~~l~~ai~~ll~----~~~~~~~m~~~~~~~ 375 (403)
T 3ot5_A 336 IEAG-TLKLIGTNKENLIKEALDLLD----NKESHDKMAQAANPY 375 (403)
T ss_dssp HHHT-SEEECCSCHHHHHHHHHHHHH----CHHHHHHHHHSCCTT
T ss_pred eeCC-cEEEcCCCHHHHHHHHHHHHc----CHHHHHHHHhhcCcc
Confidence 8666 899885 89999999999999 588889998766553
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.83 E-value=4.6e-19 Score=181.99 Aligned_cols=339 Identities=12% Similarity=0.019 Sum_probs=197.8
Q ss_pred ceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecC-------------C---CCC
Q 011690 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW-------------P---TIP 68 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~-------------~---~~~ 68 (479)
++++++..+..|...++...+..|.++ ||+|+|++..+ ........|++++.++.. . .+.
T Consensus 21 MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (412)
T 3otg_A 21 MRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEG 96 (412)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTT
T ss_pred eEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCcc
Confidence 455555544333333455677888886 99999999653 123334568888888720 0 000
Q ss_pred CCCCc-hhHHHHHHHHH-HHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhc
Q 011690 69 RGLPK-VLKPVLLLLKP-LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL 146 (479)
Q Consensus 69 ~~~~~-~~~~~~~l~~~-l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~ 146 (479)
..... .......+... ......-+..++. ..+||+|+++.. . +.+.++++..++|+|+..|+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~pDvVv~~~~---~--~~~~~aa~~~giP~v~~~~~~~~~------ 164 (412)
T 3otg_A 97 LTPEQLSELPQIVFGRVIPQRVFDELQPVIE-RLRPDLVVQEIS---N--YGAGLAALKAGIPTICHGVGRDTP------ 164 (412)
T ss_dssp CCHHHHTTSHHHHHHTHHHHHHHHHHHHHHH-HHCCSEEEEETT---C--HHHHHHHHHHTCCEEEECCSCCCC------
T ss_pred CChhHhhHHHHHHHhccchHHHHHHHHHHHH-hcCCCEEEECch---h--hHHHHHHHHcCCCEEEecccccCc------
Confidence 00000 00000111111 0111111222222 269999988852 1 224566778899999988775410
Q ss_pred CCCchhHHHHHHHhHHHHHHHH--------hhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCCCCCCCCCCChHHHHHHH
Q 011690 147 GRRSHFVSIYRCFSVLRIEKYY--------GKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELF 217 (479)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~e~~~--------~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~ 217 (479)
.....++.+++ ....+++. ...+|.+++.++...+...+.+... ..+.+.+.. ... ..
T Consensus 165 --~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~---- 231 (412)
T 3otg_A 165 --DDLTRSIEEEV-RGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFA----EQG--DL---- 231 (412)
T ss_dssp --SHHHHHHHHHH-HHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCC----CCC--CC----
T ss_pred --hhhhHHHHHHH-HHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCC----CCC--CC----
Confidence 01111222222 00112211 1357788888877665554433222 111111100 000 00
Q ss_pred HhhhhcccCCCCccccccccccCCcccccchhcccccccc--ccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhh
Q 011690 218 CRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV--FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 295 (479)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~ 295 (479)
..+ ...++++.++++.|++. .++.+.+.+++..+.+
T Consensus 232 -------------------------------------~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~---- 269 (412)
T 3otg_A 232 -------------------------------------PAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG---- 269 (412)
T ss_dssp -------------------------------------CGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT----
T ss_pred -------------------------------------CCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc----
Confidence 001 12356677889999996 6788888887777653
Q ss_pred hhccCCCchhhhhHhhhccCcccCCCCEEEEEEe-cCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEE
Q 011690 296 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC 373 (479)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG-~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~ 373 (479)
. ++++++++ +++..+.++ ++ ++|.|.|. + ++.++|+.||++|+
T Consensus 270 ------------------------~-~~~~~~~~g~~~~~~~l~------~~~~~v~~~~~-~---~~~~~l~~ad~~v~ 314 (412)
T 3otg_A 270 ------------------------L-DADVLVASGPSLDVSGLG------EVPANVRLESW-V---PQAALLPHVDLVVH 314 (412)
T ss_dssp ------------------------S-SSEEEEECCSSCCCTTCC------CCCTTEEEESC-C---CHHHHGGGCSEEEE
T ss_pred ------------------------C-CCEEEEEECCCCChhhhc------cCCCcEEEeCC-C---CHHHHHhcCcEEEE
Confidence 2 45665555 444344333 23 68999996 5 59999999999997
Q ss_pred cccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 374 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 374 p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
+ + | +.+++|||++|+|+|++..++ ..+.+.+..+|+++. ++++|+++|.++++ |++.++.+
T Consensus 315 ~---~-g---~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~----~~~~~~~~ 383 (412)
T 3otg_A 315 H---G-G---SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA----EESYRAGA 383 (412)
T ss_dssp S---C-C---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred C---C-c---hHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh----CHHHHHHH
Confidence 5 2 2 369999999999999976543 678888888999993 78999999999999 58999999
Q ss_pred HHHHHHhhhhhchHH
Q 011690 446 RNGTLEMGLSARWAT 460 (479)
Q Consensus 446 ~~~~~~~~~~~~w~~ 460 (479)
++++++......|+.
T Consensus 384 ~~~~~~~~~~~~~~~ 398 (412)
T 3otg_A 384 RAVAAEIAAMPGPDE 398 (412)
T ss_dssp HHHHHHHHHSCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 998888655555533
No 33
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.81 E-value=4.2e-18 Score=174.59 Aligned_cols=312 Identities=17% Similarity=0.148 Sum_probs=185.2
Q ss_pred CCChhHHH----HHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011690 16 GRSPRMQY----QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (479)
Q Consensus 16 g~~~r~~~----~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 91 (479)
|+++|-.+ .|..|.+ .||+|+.+|.... ...+.....|++++.++....+.+..... +..+.+.+..++..
T Consensus 10 GGTgGHi~palala~~L~~-~g~~V~~vg~~~g-~e~~~v~~~g~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 84 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQA-RGYAVHWLGTPRG-IENDLVPKAGLPLHLIQVSGLRGKGLKSL---VKAPLELLKSLFQA 84 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSS-THHHHTGGGTCCEEECC-----------------CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEECCch-HhhchhhhcCCcEEEEECCCcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 34555444 3455555 4999999985443 22233445678888887322111111111 11122222222211
Q ss_pred HHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhc
Q 011690 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKM 171 (479)
Q Consensus 92 ~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 171 (479)
+.++ +..+||+|+.+.. . ....+.++++..|+|+++.-.+.. ... . .+++.+.
T Consensus 85 -~~~l-~~~~PDvVi~~g~--~-~s~p~~laA~~~~iP~vihe~n~~----------~G~-------~-----nr~l~~~ 137 (365)
T 3s2u_A 85 -LRVI-RQLRPVCVLGLGG--Y-VTGPGGLAARLNGVPLVIHEQNAV----------AGT-------A-----NRSLAPI 137 (365)
T ss_dssp -HHHH-HHHCCSEEEECSS--S-THHHHHHHHHHTTCCEEEEECSSS----------CCH-------H-----HHHHGGG
T ss_pred -HHHH-HhcCCCEEEEcCC--c-chHHHHHHHHHcCCCEEEEecchh----------hhh-------H-----HHhhccc
Confidence 1222 2379999998873 2 233445677888999987433322 111 1 3445677
Q ss_pred CCEEEEeCHHHHHHHHHhhCCeEEEecCCC-CCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 172 ANGCLCVTQAMQHELAQNWGIKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 172 ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
++.+.+..+... ....+..+..|.. .+.+...
T Consensus 138 a~~v~~~~~~~~-----~~~~k~~~~g~pvr~~~~~~~------------------------------------------ 170 (365)
T 3s2u_A 138 ARRVCEAFPDTF-----PASDKRLTTGNPVRGELFLDA------------------------------------------ 170 (365)
T ss_dssp CSEEEESSTTSS-----CC---CEECCCCCCGGGCCCT------------------------------------------
T ss_pred cceeeecccccc-----cCcCcEEEECCCCchhhccch------------------------------------------
Confidence 888776554321 0011244444442 1222111
Q ss_pred cccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEe
Q 011690 251 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITG 329 (479)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG 329 (479)
+....+.++++.++++.|+....+..+.+++|+..+.. ..++.+ .++|
T Consensus 171 ---~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~----------------------------~~~~~vi~~~G 219 (365)
T 3s2u_A 171 ---HARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPL----------------------------EIRPAIRHQAG 219 (365)
T ss_dssp ---TSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCT----------------------------TTCCEEEEECC
T ss_pred ---hhhcccCCCCcEEEEECCcCCccccchhhHHHHHhccc----------------------------ccceEEEEecC
Confidence 11223456677788888999887777788888876643 123444 4556
Q ss_pred cCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc----
Q 011690 330 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI---- 405 (479)
Q Consensus 330 ~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~---- 405 (479)
++ +.+...+..++.+ .++.+.++ .++++++|++||++|+- .| ++++.|+|++|+|+|..+.+..
T Consensus 220 ~~-~~~~~~~~~~~~~-~~~~v~~f---~~dm~~~l~~aDlvI~r----aG---~~Tv~E~~a~G~P~Ilip~p~~~~~~ 287 (365)
T 3s2u_A 220 RQ-HAEITAERYRTVA-VEADVAPF---ISDMAAAYAWADLVICR----AG---ALTVSELTAAGLPAFLVPLPHAIDDH 287 (365)
T ss_dssp TT-THHHHHHHHHHTT-CCCEEESC---CSCHHHHHHHCSEEEEC----CC---HHHHHHHHHHTCCEEECC-----CCH
T ss_pred cc-ccccccceecccc-cccccccc---hhhhhhhhccceEEEec----CC---cchHHHHHHhCCCeEEeccCCCCCcH
Confidence 55 3455666666655 35778898 68999999999999962 33 5699999999999998875432
Q ss_pred ----hhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 406 ----EELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 406 ----~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
.+.+.+...|.++. ++++|+++|.++++ |++.+++|++++++..
T Consensus 288 Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~----d~~~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 288 QTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLM----HPETLRSMADQARSLA 339 (365)
T ss_dssp HHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH----CTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHC----CHHHHHHHHHHHHhcC
Confidence 24566666788873 47899999999999 6899999999999864
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.77 E-value=2.2e-16 Score=163.54 Aligned_cols=143 Identities=18% Similarity=0.201 Sum_probs=103.8
Q ss_pred CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+.. .++.+.+.+++..+.+ .+++++ +++|+|+..+.++
T Consensus 230 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~- 279 (430)
T 2iyf_A 230 GAEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG- 279 (430)
T ss_dssp TCSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC-
T ss_pred CCCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc-
Confidence 34567889999998 5555555555444421 256887 5789887655442
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
.+ ++|.|.|. ++.. ++|+.||++|+. .| +++++|||++|+|+|++..++ ..+.+.+...
T Consensus 280 -----~~~~~v~~~~~-~~~~---~~l~~ad~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~ 343 (430)
T 2iyf_A 280 -----ELPDNVEVHDW-VPQL---AILRQADLFVTH----AG---AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGV 343 (430)
T ss_dssp -----SCCTTEEEESS-CCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTS
T ss_pred -----cCCCCeEEEec-CCHH---HHhhccCEEEEC----CC---ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCC
Confidence 23 68999995 7654 789999999863 22 368999999999999998655 4566777788
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
|+++. ++++|+++|.++++ |++.++++++.+++..
T Consensus 344 g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 344 ARKLATEEATADLLRETALALVD----DPEVARRLRRIQAEMA 382 (430)
T ss_dssp EEECCCC-CCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHH
Confidence 99984 78999999999999 5888888888877754
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.72 E-value=1.5e-16 Score=163.23 Aligned_cols=148 Identities=14% Similarity=0.113 Sum_probs=99.2
Q ss_pred CCCCeEEEEEecCCCCC----------CHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec
Q 011690 261 PNRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 330 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K----------~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~ 330 (479)
++++.++++.|++...+ .+..+++++..+ +++++++|+
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~ 272 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVS 272 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCC
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeC
Confidence 45677888899986544 455555555432 478888887
Q ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec----Cccch
Q 011690 331 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIE 406 (479)
Q Consensus 331 G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~----~~~~~ 406 (479)
|+..+.++ ++ .++|.+.|. ++ +.++++.||++|.. .| +.+++|||++|+|+|+.. ..+..
T Consensus 273 ~~~~~~l~----~~-~~~v~~~~~-~~---~~~ll~~ad~~v~~----gG---~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 273 DKLAQTLQ----PL-PEGVLAAGQ-FP---LSAIMPACDVVVHH----GG---HGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp C------------C-CTTEEEESC-CC---HHHHGGGCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred Ccchhhhc----cC-CCcEEEeCc-CC---HHHHHhhCCEEEec----CC---HHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 76544333 21 278999996 64 78899999999963 22 568999999999999954 44677
Q ss_pred hccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHH
Q 011690 407 ELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460 (479)
Q Consensus 407 e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 460 (479)
+.+.+...|+++. ++++|++++.++++ |++.++++++.++++.....|+.
T Consensus 337 ~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~~~~~~~~ 390 (398)
T 4fzr_A 337 RLLHAAGAGVEVPWEQAGVESVLAACARIRD----DSSYVGNARRLAAEMATLPTPAD 390 (398)
T ss_dssp HHHHHTTSEEECC-------CHHHHHHHHHH----CTHHHHHHHHHHHHHTTSCCHHH
T ss_pred HHHHHcCCEEecCcccCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHcCCCHHH
Confidence 8888899999984 67899999999999 58889999988888655555543
No 36
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.70 E-value=2.8e-15 Score=152.78 Aligned_cols=145 Identities=19% Similarity=0.190 Sum_probs=102.7
Q ss_pred CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+....+ .+.+.+++..+.+ .+ +++ +++|+|+..+.+++
T Consensus 229 ~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~----------------------------~~-~~~~~~~g~~~~~~~~~~ 278 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEH-PEFFRACAQAFAD----------------------------TP-WHVVMAIGGFLDPAVLGP 278 (402)
T ss_dssp TTCCEEEEECCSCSSCC-HHHHHHHHHHHTT----------------------------SS-CEEEEECCTTSCGGGGCS
T ss_pred CCCCEEEEECCCCCcch-HHHHHHHHHHHhc----------------------------CC-cEEEEEeCCcCChhhhCC
Confidence 45677889999887654 2233333333221 33 454 45777765544332
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC-----ccchhccccCc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-----SCIEELVKVDK 413 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~-----~~~~e~i~~~~ 413 (479)
+ ++|.+.|. ++.. ++++.||++|+. .| ..+++|||++|+|+|+... .+..+.+.+..
T Consensus 279 ------~~~~v~~~~~-~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g 341 (402)
T 3ia7_A 279 ------LPPNVEAHQW-IPFH---SVLAHARACLTH----GT---TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELG 341 (402)
T ss_dssp ------CCTTEEEESC-CCHH---HHHTTEEEEEEC----CC---HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTT
T ss_pred ------CCCcEEEecC-CCHH---HHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcC
Confidence 3 68999996 6554 899999999963 22 2488999999999996544 46778888888
Q ss_pred cEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhh
Q 011690 414 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA 456 (479)
Q Consensus 414 ~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
.|..+. ++++|++++.++++ |++.++++++.+.+.....
T Consensus 342 ~g~~~~~~~~~~~~l~~~~~~ll~----~~~~~~~~~~~~~~~~~~~ 384 (402)
T 3ia7_A 342 LGSVLRPDQLEPASIREAVERLAA----DSAVRERVRRMQRDILSSG 384 (402)
T ss_dssp SEEECCGGGCSHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHTSC
T ss_pred CEEEccCCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHhhCC
Confidence 999883 78999999999999 5888888888777754333
No 37
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.70 E-value=3.6e-16 Score=159.66 Aligned_cols=149 Identities=10% Similarity=0.091 Sum_probs=112.9
Q ss_pred CCCCeEEEEEecCCCCCCH-HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~-~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+....++. ..+++++... ++ .|+++++++|+|+..+.++
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~---------------------------~p~~~~v~~~~~~~~~~l~- 266 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TE---------------------------LPGVEAVIAVPPEHRALLT- 266 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT---------------------------STTEEEEEECCGGGGGGCT-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc---------------------------CCCeEEEEEECCcchhhcc-
Confidence 4567788888998765444 6677777666 53 7889999999876544432
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec----CccchhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~----~~~~~e~i~~~~~ 414 (479)
++ ++|.+.|. ++..+ ++..||++|.. . -+.+++|||++|+|+|+.. ..+..+.+.+...
T Consensus 267 -----~~~~~v~~~~~-~~~~~---ll~~ad~~v~~----~---G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~ 330 (391)
T 3tsa_A 267 -----DLPDNARIAES-VPLNL---FLRTCELVICA----G---GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGA 330 (391)
T ss_dssp -----TCCTTEEECCS-CCGGG---TGGGCSEEEEC----C---CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTS
T ss_pred -----cCCCCEEEecc-CCHHH---HHhhCCEEEeC----C---CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCC
Confidence 23 68999995 77655 56999999963 2 2358999999999999954 3456677888889
Q ss_pred EEEeCC------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhch
Q 011690 415 GLLFSS------SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 458 (479)
Q Consensus 415 G~l~~~------~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w 458 (479)
|.++.. +++|++++.++++ |++.++++++.+.++.....|
T Consensus 331 g~~~~~~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~~~~~~ 376 (391)
T 3tsa_A 331 GICLPDEQAQSDHEQFTDSIATVLG----DTGFAAAAIKLSDEITAMPHP 376 (391)
T ss_dssp EEECCSHHHHTCHHHHHHHHHHHHT----CTHHHHHHHHHHHHHHTSCCH
T ss_pred EEecCcccccCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHcCCCH
Confidence 999854 8899999999999 588888888888776544545
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.67 E-value=2.6e-15 Score=154.11 Aligned_cols=151 Identities=19% Similarity=0.093 Sum_probs=106.8
Q ss_pred CCCCCeEEEEEecCCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHH
Q 011690 260 KPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 338 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~ 338 (479)
.++++.++++.|++... ++.+.+.+++..+.+ . +++++++|+|+..+.++
T Consensus 229 ~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~----------------------------~-~~~~v~~~g~~~~~~l~ 279 (398)
T 3oti_A 229 VPARPEVAITMGTIELQAFGIGAVEPIIAAAGE----------------------------V-DADFVLALGDLDISPLG 279 (398)
T ss_dssp CCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT----------------------------S-SSEEEEECTTSCCGGGC
T ss_pred CCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc----------------------------C-CCEEEEEECCcChhhhc
Confidence 34567789999999654 355555555555542 2 58899998877544433
Q ss_pred HHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe----cCccch--hcccc
Q 011690 339 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV----SYSCIE--ELVKV 411 (479)
Q Consensus 339 ~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas----~~~~~~--e~i~~ 411 (479)
++ ++|.+.|. + ++.++++.||++|.. . -+.++.|||++|+|+|+. +..+.. +.+.+
T Consensus 280 ------~~~~~v~~~~~-~---~~~~ll~~ad~~v~~----~---G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~ 342 (398)
T 3oti_A 280 ------TLPRNVRAVGW-T---PLHTLLRTCTAVVHH----G---GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR 342 (398)
T ss_dssp ------SCCTTEEEESS-C---CHHHHHTTCSEEEEC----C---CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH
T ss_pred ------cCCCcEEEEcc-C---CHHHHHhhCCEEEEC----C---CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH
Confidence 24 68999996 5 577789999999963 2 235899999999999994 556777 88888
Q ss_pred CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHH
Q 011690 412 DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460 (479)
Q Consensus 412 ~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 460 (479)
...|+++...+.-++.+.++++ |++.++.+++.+.++.....|+.
T Consensus 343 ~g~g~~~~~~~~~~~~l~~ll~----~~~~~~~~~~~~~~~~~~~~~~~ 387 (398)
T 3oti_A 343 RGIGLVSTSDKVDADLLRRLIG----DESLRTAAREVREEMVALPTPAE 387 (398)
T ss_dssp HTSEEECCGGGCCHHHHHHHHH----CHHHHHHHHHHHHHHHTSCCHHH
T ss_pred CCCEEeeCCCCCCHHHHHHHHc----CHHHHHHHHHHHHHHHhCCCHHH
Confidence 8999998432222333337788 58999999888888655555533
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.64 E-value=4.6e-14 Score=145.17 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=83.9
Q ss_pred EEEEE-EecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 323 LLFII-TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 323 ~~l~I-vG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
+++++ +|+++..+.++ .+ ++|.+.|. ++.. ++++.||++|+. .| ..+++|||++|+|+|+.
T Consensus 277 ~~~v~~~g~~~~~~~l~------~~~~~v~~~~~-~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 277 WHVVMTLGGQVDPAALG------DLPPNVEAHRW-VPHV---KVLEQATVCVTH----GG---MGTLMEALYWGRPLVVV 339 (415)
T ss_dssp CEEEEECTTTSCGGGGC------CCCTTEEEESC-CCHH---HHHHHEEEEEES----CC---HHHHHHHHHTTCCEEEC
T ss_pred cEEEEEeCCCCChHHhc------CCCCcEEEEec-CCHH---HHHhhCCEEEEC----Cc---HHHHHHHHHhCCCEEEe
Confidence 66665 77776554443 24 68999996 6654 789999999963 22 24889999999999995
Q ss_pred c----CccchhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 401 S----YSCIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 401 ~----~~~~~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
. .....+.+.....|..+. ++++|++++.++++ +++.++++++.+.+..
T Consensus 340 p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 396 (415)
T 3rsc_A 340 PQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAA----DPALLARVEAMRGHVR 396 (415)
T ss_dssp CCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHT----CHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHH
Confidence 4 444667777888898883 68999999999999 5888888888777754
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.56 E-value=6.7e-13 Score=135.17 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=102.7
Q ss_pred CCCCeEEEEEecCCCC-------CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 261 PNRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~-------K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
++++.++++.|++... +.+..+++|+..+ ++++++++.++.
T Consensus 208 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~ 255 (384)
T 2p6p_A 208 DTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW--------------------------------DVELIVAAPDTV 255 (384)
T ss_dssp CSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT--------------------------------TCEEEEECCHHH
T ss_pred CCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC--------------------------------CcEEEEEeCCCC
Confidence 3456789999998865 5677777776532 477877664433
Q ss_pred hHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc
Q 011690 334 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV 409 (479)
Q Consensus 334 ~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i 409 (479)
.+.++ .+ -++|.+ |. ++. .++|++||++|+. .| +.+++|||++|+|+|+....+ ..+.+
T Consensus 256 ~~~l~----~~-~~~v~~-~~-~~~---~~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~ 318 (384)
T 2p6p_A 256 AEALR----AE-VPQARV-GW-TPL---DVVAPTCDLLVHH----AG---GVSTLTGLSAGVPQLLIPKGSVLEAPARRV 318 (384)
T ss_dssp HHHHH----HH-CTTSEE-EC-CCH---HHHGGGCSEEEEC----SC---TTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred HHhhC----CC-CCceEE-cC-CCH---HHHHhhCCEEEeC----Cc---HHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence 22222 22 268999 84 764 5688999999974 22 248999999999999998644 66767
Q ss_pred ccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 410 KVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 410 ~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
.+...|+.++ +++++++++.++++ +++.++++++.+.++.
T Consensus 319 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 319 ADYGAAIALLPGEDSTEAIADSCQELQA----KDTYARRAQDLSREIS 362 (384)
T ss_dssp HHHTSEEECCTTCCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHH
T ss_pred HHCCCeEecCcCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHH
Confidence 7778899884 68999999999999 5888888888777754
No 41
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.52 E-value=1.4e-13 Score=142.30 Aligned_cols=235 Identities=15% Similarity=0.141 Sum_probs=152.5
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhH-HHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFV-SIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|++++... ..+. .++++..++|++....+.. + . ...+- ... .+.+.+.+|.+++.
T Consensus 93 ~kPD~Vlv~gd~~--~~~a-alaA~~~~IPv~h~eaglr-s------~-~~~~pee~n--------R~~~~~~a~~~~~~ 153 (385)
T 4hwg_A 93 EKPDAVLFYGDTN--SCLS-AIAAKRRKIPIFHMEAGNR-C------F-DQRVPEEIN--------RKIIDHISDVNITL 153 (385)
T ss_dssp HCCSEEEEESCSG--GGGG-HHHHHHTTCCEEEESCCCC-C------S-CTTSTHHHH--------HHHHHHHCSEEEES
T ss_pred cCCcEEEEECCch--HHHH-HHHHHHhCCCEEEEeCCCc-c------c-cccCcHHHH--------HHHHHhhhceeecC
Confidence 7999999998432 2223 4566788999653322221 0 0 00110 111 22345679999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCC-ChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+..++.+.+. |++ +.++.|...+.+... +...+.+ .+
T Consensus 154 te~~~~~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~-------------------------------------~~ 195 (385)
T 4hwg_A 154 TEHARRYLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSD-------------------------------------IL 195 (385)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCC-------------------------------------HH
T ss_pred CHHHHHHHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhH-------------------------------------HH
Confidence 99999988776 775 777776411111000 0001111 12
Q ss_pred cccccCCCCCeEEEEEecCC---CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 255 IDVFLKPNRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~---~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
..+++.+ ++.++++.+|.. ..++++.+++|+..+.++ + ++.+++...
T Consensus 196 ~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~~- 245 (385)
T 4hwg_A 196 DKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFSTH- 245 (385)
T ss_dssp HHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEEC-
T ss_pred HHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEECC-
Confidence 2334544 456777777643 447789999999998764 4 577666542
Q ss_pred CChHHHHHHHHHc-C-C---CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc-cc
Q 011690 332 PDKESYEEKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CI 405 (479)
Q Consensus 332 ~~~~~l~~~~~~~-~-l---~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~-~~ 405 (479)
| .+++.+++. + + ++|.+.+. +...++..+++.||+++.. | | ....||+++|+|+|..... +.
T Consensus 246 p---~~~~~l~~~~~~~~~~~~v~l~~~-lg~~~~~~l~~~adlvvt~---S-G----gv~~EA~alG~Pvv~~~~~ter 313 (385)
T 4hwg_A 246 P---RTKKRLEDLEGFKELGDKIRFLPA-FSFTDYVKLQMNAFCILSD---S-G----TITEEASILNLPALNIREAHER 313 (385)
T ss_dssp H---HHHHHHHTSGGGGGTGGGEEECCC-CCHHHHHHHHHHCSEEEEC---C-T----THHHHHHHTTCCEEECSSSCSC
T ss_pred h---HHHHHHHHHHHHhcCCCCEEEEcC-CCHHHHHHHHHhCcEEEEC---C-c----cHHHHHHHcCCCEEEcCCCccc
Confidence 2 356666665 4 2 58999987 8888999999999999964 3 3 2579999999999998643 35
Q ss_pred hhccccCccEEEe-CCHHHHHHHHHHHHhc
Q 011690 406 EELVKVDKNGLLF-SSSSELADQLLMLFKG 434 (479)
Q Consensus 406 ~e~i~~~~~G~l~-~~~~~la~~l~~l~~~ 434 (479)
+|.++.| +++++ .+++++++++.+++++
T Consensus 314 ~e~v~~G-~~~lv~~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 314 PEGMDAG-TLIMSGFKAERVLQAVKTITEE 342 (385)
T ss_dssp THHHHHT-CCEECCSSHHHHHHHHHHHHTT
T ss_pred hhhhhcC-ceEEcCCCHHHHHHHHHHHHhC
Confidence 7877666 67888 4899999999999984
No 42
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.48 E-value=2.9e-11 Score=124.99 Aligned_cols=141 Identities=16% Similarity=0.192 Sum_probs=99.3
Q ss_pred CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+.. .+..+.+.+++..+. .+++++ +++|.+...+.++
T Consensus 253 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~-----------------------------~~~~~~~~~~g~~~~~~~~~- 301 (424)
T 2iya_A 253 DGRPVLLIALGSAF-TDHLDFYRTCLSAVD-----------------------------GLDWHVVLSVGRFVDPADLG- 301 (424)
T ss_dssp SSCCEEEEECCSSS-CCCHHHHHHHHHHHT-----------------------------TCSSEEEEECCTTSCGGGGC-
T ss_pred CCCCEEEEEcCCCC-cchHHHHHHHHHHHh-----------------------------cCCcEEEEEECCcCChHHhc-
Confidence 45677888999887 334344333333332 234666 5678876544332
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
.+ ++|.+.+ |++.. ++|+.||++|.- .| ..+++|||++|+|+|+....+ ..+.+.+...
T Consensus 302 -----~~~~~v~~~~-~~~~~---~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~ 365 (424)
T 2iya_A 302 -----EVPPNVEVHQ-WVPQL---DILTKASAFITH----AG---MGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGL 365 (424)
T ss_dssp -----SCCTTEEEES-SCCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTS
T ss_pred -----cCCCCeEEec-CCCHH---HHHhhCCEEEEC----Cc---hhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCC
Confidence 24 6899999 47754 689999998862 22 358999999999999997643 4566667778
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|+.+. ++++++++|.++++ +++.++++++.+.+.
T Consensus 366 g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~ 403 (424)
T 2iya_A 366 GRHIPRDQVTAEKLREAVLAVAS----DPGVAERLAAVRQEI 403 (424)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHH
T ss_pred EEEcCcCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHH
Confidence 98884 78999999999999 577777777766654
No 43
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.41 E-value=6.9e-11 Score=127.89 Aligned_cols=180 Identities=14% Similarity=0.122 Sum_probs=132.5
Q ss_pred cccCCC-CCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEE--EEec--C
Q 011690 257 VFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI--ITGK--G 331 (479)
Q Consensus 257 ~~~~~~-~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~--IvG~--G 331 (479)
++++.+ +.+++++..+. .|..+.+++++..+.++ .|+..+. ++|+ |
T Consensus 433 ~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g 483 (631)
T 3q3e_A 433 YLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNG 483 (631)
T ss_dssp CCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCG
T ss_pred ccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCch
Confidence 344442 34456666664 68999999999998876 7876653 4674 3
Q ss_pred CChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccc
Q 011690 332 PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 410 (479)
Q Consensus 332 ~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~ 410 (479)
... .+.+.+.+.|+ ++|.|.|. ++.++....|+.+|+++-|+. .+-+++.+|||+||+|||+........-+.
T Consensus 484 ~~~-~~~~~~~~~GI~~Rv~F~g~-~p~~e~la~y~~aDIfLDpfp----y~GgtTtlEALwmGVPVVTl~G~~~asRvg 557 (631)
T 3q3e_A 484 ITH-PYVERFIKSYLGDSATAHPH-SPYHQYLRILHNCDMMVNPFP----FGNTNGIIDMVTLGLVGVCKTGAEVHEHID 557 (631)
T ss_dssp GGH-HHHHHHHHHHHGGGEEEECC-CCHHHHHHHHHTCSEEECCSS----SCCSHHHHHHHHTTCCEEEECCSSHHHHHH
T ss_pred hhH-HHHHHHHHcCCCccEEEcCC-CCHHHHHHHHhcCcEEEeCCc----ccCChHHHHHHHcCCCEEeccCCcHHHHhH
Confidence 333 34445567788 79999998 999999999999999998732 234789999999999999987665544332
Q ss_pred ------cCccEE-EeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhh---chHHHHHHHHHHHHHHHHh
Q 011690 411 ------VDKNGL-LFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSA---RWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 411 ------~~~~G~-l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~---~w~~~~~~~~~~~~~~~~~ 475 (479)
-|-.++ +..+.+++.+...+|.+ |++.+.++|+.+++.. .+. .|...+++.++.++++..+
T Consensus 558 aSlL~~~GLpE~LIA~d~eeYv~~Av~La~----D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~~ 629 (631)
T 3q3e_A 558 EGLFKRLGLPEWLIANTVDEYVERAVRLAE----NHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFLK 629 (631)
T ss_dssp HHHHHHTTCCGGGEESSHHHHHHHHHHHHH----CHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcceecCCHHHHHHHHHHHhC----CHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHh
Confidence 344553 67899999999999999 6999999999988753 122 3556777777777766544
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.40 E-value=1.4e-11 Score=128.45 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=102.6
Q ss_pred CCCCeEEEEEecCCC-----CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 261 PNRPALVVSSTSWTP-----DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~-----~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
++++.++++.|+... .+.+..+++|+..+ ++++++++.++..+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~ 312 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE 312 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence 456778899998875 47888888887532 46787777665433
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccc
Q 011690 336 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK 410 (479)
Q Consensus 336 ~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~ 410 (479)
.++ ++ ++|.+.|. ++. .++|.+||++|+. .| +.++.|||++|+|+|+....+ ..+.+.
T Consensus 313 ~l~------~~~~~v~~~~~-~~~---~~ll~~ad~~V~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 375 (441)
T 2yjn_A 313 GVA------NIPDNVRTVGF-VPM---HALLPTCAATVHH----GG---PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ 375 (441)
T ss_dssp SCS------SCCSSEEECCS-CCH---HHHGGGCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred hhc------cCCCCEEEecC-CCH---HHHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCCcccHHHHHHHHH
Confidence 221 24 68999995 775 4578999999962 22 468999999999999998743 566777
Q ss_pred cCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 411 VDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 411 ~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+...|+.+. ++++|+++|.++++ +++.++.+++.+.+..
T Consensus 376 ~~g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 418 (441)
T 2yjn_A 376 EFGAGIALPVPELTPDQLRESVKRVLD----DPAHRAGAARMRDDML 418 (441)
T ss_dssp HHTSEEECCTTTCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHH
T ss_pred HcCCEEEcccccCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHH
Confidence 778899884 68999999999999 5888888888777654
No 45
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.29 E-value=1e-09 Score=113.36 Aligned_cols=135 Identities=11% Similarity=0.024 Sum_probs=96.5
Q ss_pred CCCeEEEEEecC-CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCCChHHHHH
Q 011690 262 NRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEE 339 (479)
Q Consensus 262 ~~~~~i~~~g~~-~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~~~~~l~~ 339 (479)
+++.++++.|+. .+.+..+.+++|+..+ + .+++++ |.+....
T Consensus 237 ~~~~v~v~~Gs~~~~~~~~~~~~~al~~~-------------------------------~-~~~v~~~g~~~~~~---- 280 (415)
T 1iir_A 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAH-------------------------------G-RRVILSRGWADLVL---- 280 (415)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHT-------------------------------T-CCEEECTTCTTCCC----
T ss_pred CCCeEEEeCCCCCCcHHHHHHHHHHHHHC-------------------------------C-CeEEEEeCCCcccc----
Confidence 345688999998 4777777777777643 1 345444 7664320
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
..+ ++|.+.+ |++..+ ++.+||++|+. .| ..++.|||++|+|+|+....+ ..+.+++...
T Consensus 281 ----~~~~~~v~~~~-~~~~~~---~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~ 345 (415)
T 1iir_A 281 ----PDDGADCFAIG-EVNHQV---LFGRVAAVIHH----GG---AGTTHVAARAGAPQILLPQMADQPYYAGRVAELGV 345 (415)
T ss_dssp ----SSCGGGEEECS-SCCHHH---HGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ----cCCCCCEEEeC-cCChHH---HHhhCCEEEeC----CC---hhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCC
Confidence 234 6899999 588654 57999999963 22 259999999999999997644 5566777778
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|+.+. ++++++++|.++ + +++.++++++.+.+.
T Consensus 346 g~~~~~~~~~~~~l~~~i~~l-~----~~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 346 GVAHDGPIPTFDSLSAALATA-L----TPETHARATAVAGTI 382 (415)
T ss_dssp EEECSSSSCCHHHHHHHHHHH-T----SHHHHHHHHHHHHHS
T ss_pred cccCCcCCCCHHHHHHHHHHH-c----CHHHHHHHHHHHHHH
Confidence 99884 688999999999 7 578777777777664
No 46
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.26 E-value=1.4e-09 Score=112.16 Aligned_cols=138 Identities=13% Similarity=0.095 Sum_probs=96.8
Q ss_pred CCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+.. +.+.+..+++++..+ ++++++++.++..+.
T Consensus 219 ~~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~vv~~~g~~~~~~--- 263 (404)
T 3h4t_A 219 AGSPPVYVGFGSGPAPAEAARVAIEAVRAQ--------------------------------GRRVVLSSGWAGLGR--- 263 (404)
T ss_dssp TSSCCEEECCTTSCCCTTHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCCC---
T ss_pred cCCCeEEEECCCCCCcHHHHHHHHHHHHhC--------------------------------CCEEEEEeCCccccc---
Confidence 45567888889887 666677777776643 355666543332211
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
.+. +||.+.+. ++. .+++..||++|.- .| ..++.||+++|+|+|+....+ ..+.+.....
T Consensus 264 ----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~~----gG---~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~ 328 (404)
T 3h4t_A 264 ----IDEGDDCLVVGE-VNH---QVLFGRVAAVVHH----GG---AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGV 328 (404)
T ss_dssp ----SSCCTTEEEESS-CCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ----ccCCCCEEEecC-CCH---HHHHhhCcEEEEC----Cc---HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCC
Confidence 223 78999995 765 5578999999963 22 148999999999999987554 3345666678
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
|..+. ++++|++++.++++ ++.++++++.+.++.
T Consensus 329 g~~l~~~~~~~~~l~~ai~~ll~-----~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 329 GVAHDGPTPTVESLSAALATALT-----PGIRARAAAVAGTIR 366 (404)
T ss_dssp EEECSSSSCCHHHHHHHHHHHTS-----HHHHHHHHHHHTTCC
T ss_pred EeccCcCCCCHHHHHHHHHHHhC-----HHHHHHHHHHHHHHh
Confidence 88873 68899999999986 466777777766643
No 47
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.18 E-value=1.7e-10 Score=117.47 Aligned_cols=143 Identities=18% Similarity=0.173 Sum_probs=93.3
Q ss_pred CCCCCeEEEEEecCCCCCC-HHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHH
Q 011690 260 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 338 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~-~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~ 338 (479)
.++++.++++.|+....++ .+.+.+++..+.+ .+..+++.+.+...+..
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~~- 283 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLALL- 283 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCCC-
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCcccccc-
Confidence 4566778888888765443 3344444444432 24566665544322211
Q ss_pred HHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCc
Q 011690 339 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 413 (479)
Q Consensus 339 ~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~ 413 (479)
..+ ++|.+.+ |+|. .++|..+|++|.- .| .+++.|||++|+|+|+....+ +.+.+....
T Consensus 284 -----~~~~~~v~~~~-~~p~---~~lL~~~~~~v~h----~G---~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G 347 (400)
T 4amg_A 284 -----GELPANVRVVE-WIPL---GALLETCDAIIHH----GG---SGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG 347 (400)
T ss_dssp -----CCCCTTEEEEC-CCCH---HHHHTTCSEEEEC----CC---HHHHHHHHHHTCCEEECCC---CHHHHHHHHHHT
T ss_pred -----ccCCCCEEEEe-ecCH---HHHhhhhhheecc----CC---ccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCC
Confidence 134 6899988 5875 4578999998852 22 348999999999999975443 556666777
Q ss_pred cEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 414 NGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 414 ~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
.|+.+++.+..+++|.++++ |++.+++.++-+.++
T Consensus 348 ~g~~l~~~~~~~~al~~lL~----d~~~r~~a~~l~~~~ 382 (400)
T 4amg_A 348 IGFDAEAGSLGAEQCRRLLD----DAGLREAALRVRQEM 382 (400)
T ss_dssp SEEECCTTTCSHHHHHHHHH----CHHHHHHHHHHHHHH
T ss_pred CEEEcCCCCchHHHHHHHHc----CHHHHHHHHHHHHHH
Confidence 89888777778899999999 577666666555553
No 48
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.13 E-value=1.9e-08 Score=103.73 Aligned_cols=134 Identities=10% Similarity=-0.013 Sum_probs=94.0
Q ss_pred CCeEEEEEecCC---CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCCChHHHH
Q 011690 263 RPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYE 338 (479)
Q Consensus 263 ~~~~i~~~g~~~---~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~~~~~l~ 338 (479)
++.++++.|+.. +.+.+..+++|+..+ +.+++++ |.+... .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~- 281 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ--------------------------------GRRVILSRGWTELV--L- 281 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC--C-
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCcccc--c-
Confidence 456888888875 345555566665532 2455554 766431 1
Q ss_pred HHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCc
Q 011690 339 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 413 (479)
Q Consensus 339 ~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~ 413 (479)
..+ ++|.+.+. ++. .++|.+||++|+- .| ..++.||+++|+|+|+....+ ..+.+++..
T Consensus 282 -----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g 345 (416)
T 1rrv_A 282 -----PDDRDDCFAIDE-VNF---QALFRRVAAVIHH----GS---AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALG 345 (416)
T ss_dssp -----SCCCTTEEEESS-CCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHT
T ss_pred -----cCCCCCEEEecc-CCh---HHHhccCCEEEec----CC---hhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCC
Confidence 234 68999994 874 5578999999962 22 359999999999999987543 445666777
Q ss_pred cEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 414 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 414 ~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
.|+.+. +++++++++.++ . |++.++++++.+.+.
T Consensus 346 ~g~~~~~~~~~~~~l~~~i~~l-~----~~~~~~~~~~~~~~~ 383 (416)
T 1rrv_A 346 IGVAHDGPTPTFESLSAALTTV-L----APETRARAEAVAGMV 383 (416)
T ss_dssp SEEECSSSCCCHHHHHHHHHHH-T----SHHHHHHHHHHTTTC
T ss_pred CccCCCCCCCCHHHHHHHHHHh-h----CHHHHHHHHHHHHHH
Confidence 888873 588999999999 7 577777777766654
No 49
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.07 E-value=5.3e-10 Score=101.04 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=95.3
Q ss_pred CCCCeEEEEEecCC---CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHH
Q 011690 261 PNRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 337 (479)
Q Consensus 261 ~~~~~~i~~~g~~~---~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l 337 (479)
++++.++++.|+.. +.|.+..+++|+.. . +.++++++.|+..+
T Consensus 19 ~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~-------------------------------~-~~~~~~~~g~~~~~-- 64 (170)
T 2o6l_A 19 GENGVVVFSLGSMVSNMTEERANVIASALAQ-------------------------------I-PQKVLWRFDGNKPD-- 64 (170)
T ss_dssp TTTCEEEEECCSCCTTCCHHHHHHHHHHHTT-------------------------------S-SSEEEEECCSSCCT--
T ss_pred CCCCEEEEECCCCcccCCHHHHHHHHHHHHh-------------------------------C-CCeEEEEECCcCcc--
Confidence 34567899999985 55666777776643 2 25777777665322
Q ss_pred HHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc----cchhccccC
Q 011690 338 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVD 412 (479)
Q Consensus 338 ~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~----~~~e~i~~~ 412 (479)
++ ++|.+.|. ++.+++..+ .+||++|+. . -+.++.|||++|+|+|+.... ...+.+.+.
T Consensus 65 -------~~~~~v~~~~~-~~~~~~l~~-~~ad~~I~~----~---G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~ 128 (170)
T 2o6l_A 65 -------TLGLNTRLYKW-IPQNDLLGH-PKTRAFITH----G---GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR 128 (170)
T ss_dssp -------TCCTTEEEESS-CCHHHHHTS-TTEEEEEEC----C---CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT
T ss_pred -------cCCCcEEEecC-CCHHHHhcC-CCcCEEEEc----C---CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc
Confidence 24 68999995 887554332 999999963 2 246999999999999999864 346778888
Q ss_pred ccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 413 KNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 413 ~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
..|+.++ ++++|+++|.++++ +++.++++
T Consensus 129 g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~a 161 (170)
T 2o6l_A 129 GAAVRVDFNTMSSTDLLNALKRVIN----DPSYKENV 161 (170)
T ss_dssp TSEEECCTTTCCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred CCeEEeccccCCHHHHHHHHHHHHc----CHHHHHHH
Confidence 8999984 78999999999998 46543333
No 50
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=98.47 E-value=0.0001 Score=77.32 Aligned_cols=112 Identities=16% Similarity=0.136 Sum_probs=75.9
Q ss_pred CcEEEecCCCCcchHHHHHH--cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEeC
Q 011690 347 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~~ 419 (479)
+++.+.+ |+|+. ++|+ ++|++|. ..| ..++.||+++|+|+|+....+ ....+.+. +.|..+.
T Consensus 325 ~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~ 393 (456)
T 2c1x_A 325 GYGMVVP-WAPQA---EVLAHEAVGAFVT----HCG---WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 393 (456)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEEE----CCC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred CceEEec-CCCHH---HHhcCCcCCEEEe----cCC---cchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec
Confidence 5788888 78874 5788 6677774 122 248999999999999997543 34556666 7888873
Q ss_pred ----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhch-----HHHHHHHHHHHHHHHHh
Q 011690 420 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW-----ATEWEEHAKPLITEVIS 475 (479)
Q Consensus 420 ----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w-----~~~~~~~~~~~~~~~~~ 475 (479)
+.+++++++.+++.+ ++ .+.+++++.+.....+- ..++ +.+..+++++.+
T Consensus 394 ~~~~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~~~~~~a~~~gGsS~-~~l~~~v~~~~~ 452 (456)
T 2c1x_A 394 GGVFTKSGLMSCFDQILSQ----EK-GKKLRENLRALRETADRAVGPKGSST-ENFITLVDLVSK 452 (456)
T ss_dssp GGSCCHHHHHHHHHHHHHS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHHTS
T ss_pred CCCcCHHHHHHHHHHHHCC----Cc-HHHHHHHHHHHHHHHHHhhhcCCcHH-HHHHHHHHHHHh
Confidence 578999999999984 54 66777777775422211 1122 345666666543
No 51
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=98.42 E-value=7.8e-05 Score=78.40 Aligned_cols=93 Identities=13% Similarity=0.217 Sum_probs=66.9
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~~-- 419 (479)
+|+.+.+ |+|+. .+|+.+++.++. +.+ |. .+++|++++|+|+|+....+ ....+.+. +.|..+.
T Consensus 327 ~~~~vv~-w~Pq~---~vL~h~~v~~fv---tH~-G~-~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~ 397 (454)
T 3hbf_A 327 TKGKIVA-WAPQV---EILKHSSVGVFL---THS-GW-NSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG 397 (454)
T ss_dssp TTEEEES-SCCHH---HHHHSTTEEEEE---ECC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGG
T ss_pred CceEEEe-eCCHH---HHHhhcCcCeEE---ecC-Cc-chHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCC
Confidence 5788887 78874 688999965443 222 22 48999999999999987533 34556554 7888873
Q ss_pred --CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 --~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+++++++.+++.+ +..+.+|+++.+++
T Consensus 398 ~~~~~~l~~av~~ll~~-----~~~~~~r~~a~~l~ 428 (454)
T 3hbf_A 398 VLTKESIKKALELTMSS-----EKGGIMRQKIVKLK 428 (454)
T ss_dssp SCCHHHHHHHHHHHHSS-----HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCC-----ChHHHHHHHHHHHH
Confidence 478999999999983 44566777777654
No 52
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.42 E-value=2.3e-06 Score=94.59 Aligned_cols=184 Identities=13% Similarity=0.088 Sum_probs=120.4
Q ss_pred CCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC-ChHHH
Q 011690 260 KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESY 337 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-~~~~l 337 (479)
.++.+ +++.+.|++.+|+.+. ++..+..+.+- .+........+.|++.|+|. .-+.-
T Consensus 523 dpd~l-~~~~vkRl~eYKRq~Lnil~ii~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~a 581 (796)
T 1l5w_A 523 NPQAI-FDIQIKRLHEYKRQHLNLLHILALYKEI--------------------RENPQADRVPRVFLFGAKAAPGYYLA 581 (796)
T ss_dssp CTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HTCTTCCCCCEEEEEECCCCTTCHHH
T ss_pred CCCcc-eEeeeecchhhcccCEeHHHHHHHHHHH--------------------hcCCCCCCCCeEEEEEecCChhHHHH
Confidence 44554 8999999999999999 88888777541 11111112459999999984 32222
Q ss_pred HHH---HHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 338 EEK---IRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 338 ~~~---~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
++. +.+. .. + +|.|+-. .+.+-...++++||+.+.|++. ..|..|+.=+=+|..|.+-|++--|
T Consensus 582 K~iIk~i~~va~~in~Dp~~~~~lKVvfl~n-Y~vslA~~I~~gaDv~l~~S~a-~~EAsGTs~MKam~NGaL~iGtLDG 659 (796)
T 1l5w_A 582 KNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQISTA-GKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp HHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEECCCT-TTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeecCCCC-CCCCCchHHHHHHHcCCeeecCcCC
Confidence 222 2222 23 4 6888876 6778888999999999999543 2466677888899999999999888
Q ss_pred cchhcccc--CccEEEe-CCHHHHHHHHH------HHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHH
Q 011690 404 CIEELVKV--DKNGLLF-SSSSELADQLL------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 474 (479)
Q Consensus 404 ~~~e~i~~--~~~G~l~-~~~~~la~~l~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 474 (479)
...|+.+. .+|||+| .+++++.+.-. ..... ++ .++++-+++.. ..++|++. ....+|++.++
T Consensus 660 anvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~---~~-~~~~vvd~~~~--g~fs~~~~--~~y~~Ly~~L~ 731 (796)
T 1l5w_A 660 ANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKK---DK-VLDAVLKELES--GKYSDGDK--HAFDQMLHSIG 731 (796)
T ss_dssp THHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHH---CH-HHHHHHHHHHH--TTTTTTCT--TTTHHHHHHTS
T ss_pred eeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhc---CH-HHHHHHHHHHc--CCCCCCcH--HHHHHHHHHHh
Confidence 88887655 4799999 55666653221 22332 34 34444444444 26777553 23555655554
No 53
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=98.34 E-value=0.00029 Score=74.26 Aligned_cols=93 Identities=16% Similarity=0.267 Sum_probs=66.8
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~-- 419 (479)
+|+.+.+ |+|+. ++|+.+++.++- +.+ | ..++.|++++|+|+|+....+ ....+ +.-+.|+.+.
T Consensus 353 ~~~~v~~-~~pq~---~~L~h~~~~~~v---th~-G-~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~ 423 (482)
T 2pq6_A 353 DRGLIAS-WCPQD---KVLNHPSIGGFL---THC-G-WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN 423 (482)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEE---ECC-C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSS
T ss_pred CCEEEEe-ecCHH---HHhcCCCCCEEE---ecC-C-cchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCC
Confidence 6788888 78875 488777763332 222 1 248999999999999997544 33444 3567788884
Q ss_pred -CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 -~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+++++++.+++.+ ++ .+.+++++.+..
T Consensus 424 ~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 424 VKREELAKLINEVIAG----DK-GKKMKQKAMELK 453 (482)
T ss_dssp CCHHHHHHHHHHHHTS----HH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC----Cc-HHHHHHHHHHHH
Confidence 689999999999984 54 467888877754
No 54
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.33 E-value=9e-06 Score=89.94 Aligned_cols=137 Identities=14% Similarity=0.104 Sum_probs=98.6
Q ss_pred CCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC-ChHHH
Q 011690 260 KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESY 337 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-~~~~l 337 (479)
.++.+ +++.+.|++.+|+.+. ++..+..+.+- .+........+.|++.|+|. .-+.-
T Consensus 513 dpd~l-~~~~vkRlheYKRq~Lnil~ii~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~a 571 (796)
T 2c4m_A 513 DPESI-FDVQIKRLHEYKRQLMNALYVLDLYFRI--------------------KEDGLTDIPARTVIFGAKAAPGYVRA 571 (796)
T ss_dssp CTTSE-EEEEECCCCGGGTHHHHHHHHHHHHHHH--------------------HTSCCCSSCCEEEEEECCCCTTCHHH
T ss_pred CCCCc-EEEEeecchhhcccCEeHHHHHHHHHHH--------------------hhCCCCCCCCeEEEEEecCCHhHHHH
Confidence 44554 8999999999999999 88888777531 11101112359999999984 22222
Q ss_pred HHH---HHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 338 EEK---IRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 338 ~~~---~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
++. +.+. .. + +|.|+-. .+.+-...++++||+.+.|++. ..|..|+.=+=+|..|.+-|++--|
T Consensus 572 K~iIk~i~~va~~in~dp~~~~~lKVvFl~n-Y~vslA~~I~~gaDv~l~~S~a-~~EAsGTs~MKam~NGaL~iGtLDG 649 (796)
T 2c4m_A 572 KAIIKLINSIADLVNNDPEVSPLLKVVFVEN-YNVSPAEHILPASDVSEQISTA-GKEASGTSNMKFMMNGALTLGTMDG 649 (796)
T ss_dssp HHHHHHHHHHHHHHHTCTTTTTTEEEEEETT-CCHHHHHHHGGGCSEEEECCCT-TSCSCCHHHHHHHHTTCEEEEESST
T ss_pred HHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeecCCCC-CCCCCchHHHHHHHcCCeEEeccCC
Confidence 222 2222 23 4 6998876 6788888999999999999543 3567788889999999999999888
Q ss_pred cchhcccc--CccEEEeC
Q 011690 404 CIEELVKV--DKNGLLFS 419 (479)
Q Consensus 404 ~~~e~i~~--~~~G~l~~ 419 (479)
...|+.+. .+|||+|+
T Consensus 650 anvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 650 ANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp HHHHHHHHHCGGGSEEES
T ss_pred eEeehhhhcCCCcEEEec
Confidence 88887655 46999994
No 55
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.33 E-value=8.8e-06 Score=90.46 Aligned_cols=181 Identities=13% Similarity=0.080 Sum_probs=128.6
Q ss_pred cccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-
Q 011690 253 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG- 331 (479)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G- 331 (479)
.|..++++.+. +++.+..++. |=-+..++++..+.++ .|+.+|++...+
T Consensus 513 ~R~~~gLp~~~-v~f~~fN~~~--Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~ 562 (723)
T 4gyw_A 513 TRSQYGLPEDA-IVYCNFNQLY--KIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPA 562 (723)
T ss_dssp EGGGGTCCTTS-EEEECCSCGG--GCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTG
T ss_pred chhhcCCCCCC-EEEEeCCccc--cCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcH
Confidence 45677787665 3554444443 6677888998888876 899999887754
Q ss_pred CChHHHHHHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch---
Q 011690 332 PDKESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE--- 406 (479)
Q Consensus 332 ~~~~~l~~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~--- 406 (479)
...+.+++.+++.|+ ++|.|.+. .+.++....++.+||++=|... +=+++..||+.||+|||+-....+.
T Consensus 563 ~~~~~l~~~~~~~gi~~~r~~f~~~-~~~~~~l~~~~~~Di~LDt~p~----~g~tT~~eal~~GvPvvt~~g~~~~sR~ 637 (723)
T 4gyw_A 563 VGEPNIQQYAQNMGLPQNRIIFSPV-APKEEHVRRGQLADVCLDTPLC----NGHTTGMDVLWAGTPMVTMPGETLASRV 637 (723)
T ss_dssp GGHHHHHHHHHHTTCCGGGEEEEEC-CCHHHHHHHGGGCSEEECCSSS----CCSHHHHHHHHTTCCEEBCCCSSGGGTH
T ss_pred HHHHHHHHHHHhcCCCcCeEEECCC-CCHHHHHHHhCCCeEEeCCCCc----CCHHHHHHHHHcCCCEEEccCCCccHhH
Confidence 345678888889998 58999997 9999999999999999975322 2356999999999999997533221
Q ss_pred --hcccc-CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh------hhhchHHHHHHHHHHHHHH
Q 011690 407 --ELVKV-DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG------LSARWATEWEEHAKPLITE 472 (479)
Q Consensus 407 --e~i~~-~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~w~~~~~~~~~~~~~~ 472 (479)
.++.. |-.-++..|.++..+.-.+|.+ |++.+..+|+..++.. ....|..+.|+....++++
T Consensus 638 ~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~----d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 638 AASQLTCLGCLELIAKNRQEYEDIAVKLGT----DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHTCGGGBCSSHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccccCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 12211 2233456889999999999999 5888888887766532 2334555555555555443
No 56
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=98.31 E-value=0.0029 Score=66.32 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=56.1
Q ss_pred CcEEEecCCCCcchHHHHHH--cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhc-cccCccEEEe-
Q 011690 347 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLF- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~-i~~~~~G~l~- 418 (479)
+++...+ |+|+. .+|+ ++|++|. ..| ..++.|++++|+|+|+....+ .... ++..+.|+.+
T Consensus 332 ~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~ 400 (463)
T 2acv_A 332 GKGMICG-WAPQV---EVLAHKAIGGFVS----HCG---WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 400 (463)
T ss_dssp CSEEEES-SCCHH---HHHHSTTEEEEEE----CCC---HHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCEEEEc-cCCHH---HHhCCCccCeEEe----cCC---chhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEe
Confidence 4678888 78875 4676 5777774 122 248999999999999997543 3344 4667788887
Q ss_pred C---------CHHHHHHHHHHHHh
Q 011690 419 S---------SSSELADQLLMLFK 433 (479)
Q Consensus 419 ~---------~~~~la~~l~~l~~ 433 (479)
. +.+++++++.++++
T Consensus 401 ~~~~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 401 VDYRKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred cccCCCCccccHHHHHHHHHHHHh
Confidence 2 47899999999996
No 57
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=98.13 E-value=0.0021 Score=67.71 Aligned_cols=90 Identities=19% Similarity=0.207 Sum_probs=60.7
Q ss_pred EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC----
Q 011690 349 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS---- 419 (479)
Q Consensus 349 V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~---- 419 (479)
+...+ |+|+. ++|+.+++.++- +.+ |. .+++||+++|+|+|+-...+ ....+ +.-+.|+.+.
T Consensus 341 ~~v~~-w~Pq~---~vL~h~~v~~fv---tHg-G~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~ 411 (480)
T 2vch_A 341 FVIPF-WAPQA---QVLAHPSTGGFL---THC-GW-NSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD 411 (480)
T ss_dssp EEEES-CCCHH---HHHHSTTEEEEE---ECC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred EEEeC-ccCHH---HHhCCCCcCeEE---ecc-cc-hhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccC
Confidence 44445 78875 689999964443 222 23 38999999999999987543 33443 5667787762
Q ss_pred ---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 420 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 420 ---~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+.+++++++.+++.+ + .-..+++++.++
T Consensus 412 ~~~~~~~l~~av~~vl~~----~-~~~~~r~~a~~l 442 (480)
T 2vch_A 412 GLVRREEVARVVKGLMEG----E-EGKGVRNKMKEL 442 (480)
T ss_dssp SCCCHHHHHHHHHHHHTS----T-HHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhcC----c-chHHHHHHHHHH
Confidence 478999999999984 2 334455555554
No 58
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=98.07 E-value=0.00051 Score=69.37 Aligned_cols=111 Identities=14% Similarity=0.119 Sum_probs=76.4
Q ss_pred cCCCCCeEEEEEecCCCCCCH--HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHH
Q 011690 259 LKPNRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~--~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~ 336 (479)
+.++++.+++..|.-.+.|.. +...+.+..+.++ +.+++++|...+.+.
T Consensus 181 ~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~~ 231 (349)
T 3tov_A 181 LTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLEM 231 (349)
T ss_dssp CCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHHH
T ss_pred CCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHHH
Confidence 445567677776653345544 5677777777653 467777886666666
Q ss_pred HHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchh
Q 011690 337 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 407 (479)
Q Consensus 337 l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e 407 (479)
.++.++..+...+.+.|. .+-.++..+++.||++|.. .+| ..-+ |.++|+|+|+--.+..+.
T Consensus 232 ~~~i~~~~~~~~~~l~g~-~sl~e~~ali~~a~~~i~~---DsG----~~Hl-Aaa~g~P~v~lfg~t~p~ 293 (349)
T 3tov_A 232 VQPVVEQMETKPIVATGK-FQLGPLAAAMNRCNLLITN---DSG----PMHV-GISQGVPIVALYGPSNPF 293 (349)
T ss_dssp HHHHHHTCSSCCEECTTC-CCHHHHHHHHHTCSEEEEE---SSH----HHHH-HHTTTCCEEEECSSCCHH
T ss_pred HHHHHHhcccccEEeeCC-CCHHHHHHHHHhCCEEEEC---CCC----HHHH-HHhcCCCEEEEECCCCcc
Confidence 666655554345778887 8899999999999999975 343 2444 899999999975444333
No 59
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=98.00 E-value=0.00011 Score=73.22 Aligned_cols=105 Identities=16% Similarity=0.148 Sum_probs=71.7
Q ss_pred cCCCCCeEEEEEec-CCCCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 259 LKPNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 259 ~~~~~~~~i~~~g~-~~~~K~~~--~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
+..+++.+++..|. ..+.|... .+.++++.+.+ . +++++++|...+.+
T Consensus 176 ~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~----------------------------~-~~~vvl~g~~~e~~ 226 (348)
T 1psw_A 176 LSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID----------------------------E-GYQVVLFGSAKDHE 226 (348)
T ss_dssp CCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH----------------------------T-TCEEEECCCGGGHH
T ss_pred CCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH----------------------------C-CCeEEEEeChhhHH
Confidence 33355667777776 65666654 77787777764 2 57888888655544
Q ss_pred HHHHHHHHcC----CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec
Q 011690 336 SYEEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 401 (479)
Q Consensus 336 ~l~~~~~~~~----l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~ 401 (479)
..++..+..+ ...+.+.|. .+-.++..+++.||++|.. ++| .+--|.|+|+|+|+--
T Consensus 227 ~~~~i~~~~~~~~~~~~~~l~g~-~sl~e~~ali~~a~l~I~~---Dsg-----~~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 227 AGNEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVTN---DSG-----LMHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhhhhccccceEeccCc-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEEEEE
Confidence 4444433222 123567787 8899999999999999975 444 2333999999999874
No 60
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.89 E-value=0.0016 Score=64.01 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=52.2
Q ss_pred EEEEEecC-CChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 324 LFIITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 324 ~l~IvG~G-~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
..+|.|.| +..+++++.+++. .++.+.++ .+++++++++||++|++ . |+++.|++++|+|.|....
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~~---~~~m~~~m~~aDlvI~~----g----G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFID---HENIAKLMNESNKLIIS----A----SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTC--SSEEEEES---CSCHHHHHHTEEEEEEE----S----SHHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHhhC--CCEEEEeC---HHHHHHHHHHCCEEEEC----C----cHHHHHHHHcCCCEEEEeC
Confidence 44677876 4556677665542 58999998 89999999999999974 2 2499999999999998764
Q ss_pred c
Q 011690 403 S 403 (479)
Q Consensus 403 ~ 403 (479)
.
T Consensus 253 ~ 253 (282)
T 3hbm_A 253 V 253 (282)
T ss_dssp S
T ss_pred C
Confidence 3
No 61
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=97.81 E-value=0.00023 Score=79.07 Aligned_cols=183 Identities=13% Similarity=0.090 Sum_probs=119.0
Q ss_pred CCCCCeEEEEEecCCCCCCHHHH-HHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC-ChHH-
Q 011690 260 KPNRPALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES- 336 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~l-ieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-~~~~- 336 (479)
.++.+ +++.+.|++.+|+.+.+ +..+..+.+- .+.......+..|++.|+|. .-+.
T Consensus 547 dpd~l-~~g~vkRl~eYKRq~L~~l~~i~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~a 605 (824)
T 2gj4_A 547 NPNSL-FDVQVKRIHEYKRQLLNCLHVITLYNRI--------------------KKEPNKFVVPRTVMIGGKAAPGYHMA 605 (824)
T ss_dssp CTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HHCTTSCCCCEEEEEECCCCTTCHHH
T ss_pred CCCcc-eEeeeecchhhcchhhHHHHHHHHHHHH--------------------HhCCCCCCCCEEEEEEEeCCHhHHHH
Confidence 45554 89999999999999998 7777776421 00000112258999999984 2222
Q ss_pred ------HHHHHHHcC----C-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 337 ------YEEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 337 ------l~~~~~~~~----l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
+.+.++..+ + + +|.|+-. .+.+-...++++||+.+.|++. ..|..|+.=+=+|..|.+-|++--|
T Consensus 606 K~iIkli~~va~~in~Dp~v~~~lKVvFl~n-YdvslA~~I~~gaDv~l~~S~a-g~EAsGTs~MKamlNGaLtigtlDG 683 (824)
T 2gj4_A 606 KMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQISTA-GTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp HHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEECCCT-TSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHHHHHHHHHHHhccCcccCCceEEEEECC-CCHHHHHHHhhhcceeecCCCC-CCCCCchHHHHHHHcCceEEEEecC
Confidence 333333321 2 3 6888876 6778888999999999999543 2566677888899999999999877
Q ss_pred cchhccc--cCccEEEeC-CHHHHHHHHH-------HHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 011690 404 CIEELVK--VDKNGLLFS-SSSELADQLL-------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 404 ~~~e~i~--~~~~G~l~~-~~~~la~~l~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 473 (479)
..-|+.+ ..+|||+|+ .++++ +.+. .+.+. +++ ++.+-+++.. ..++|... +...+|++.+
T Consensus 684 anvEi~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~---~~~-l~~v~d~i~~--g~fs~~~~--~~y~~ly~~l 754 (824)
T 2gj4_A 684 ANVEMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR---IPE-LRQIIEQLSS--GFFSPKQP--DLFKDIVNML 754 (824)
T ss_dssp THHHHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH---CHH-HHHHHHHHHH--TTTCTTST--TTTHHHHHHH
T ss_pred ccchhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC---CHH-HHHHHHHHHh--CCCCCCCh--HHHHHHHHHH
Confidence 7767764 467899994 46666 4332 23342 333 3333333333 36777665 2356666666
Q ss_pred H
Q 011690 474 I 474 (479)
Q Consensus 474 ~ 474 (479)
+
T Consensus 755 ~ 755 (824)
T 2gj4_A 755 M 755 (824)
T ss_dssp H
T ss_pred H
Confidence 5
No 62
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.05 E-value=0.018 Score=63.66 Aligned_cols=68 Identities=21% Similarity=0.061 Sum_probs=49.3
Q ss_pred cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC---------ccchhccccCccEEEeCCHHHHHHHH
Q 011690 358 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY---------SCIEELVKVDKNGLLFSSSSELADQL 428 (479)
Q Consensus 358 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~---------~~~~e~i~~~~~G~l~~~~~~la~~l 428 (479)
..++.+++..||++|.= .++ +++|++..++|||.... .|.-.-+.+.--|-++.+.++|.++|
T Consensus 606 ~~di~~ll~~aD~lITD---ySS-----v~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i 677 (729)
T 3l7i_A 606 YNDVSELFLISDCLITD---YSS-----VMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKEL 677 (729)
T ss_dssp CSCHHHHHHTCSEEEES---SCT-----HHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHH
T ss_pred CcCHHHHHHHhCEEEee---chH-----HHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHHHHH
Confidence 56899999999999951 233 89999999999998831 11111122234577788899999999
Q ss_pred HHHHh
Q 011690 429 LMLFK 433 (479)
Q Consensus 429 ~~l~~ 433 (479)
.....
T Consensus 678 ~~~~~ 682 (729)
T 3l7i_A 678 KNLDK 682 (729)
T ss_dssp TTHHH
T ss_pred hhhhc
Confidence 87765
No 63
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=96.67 E-value=0.0024 Score=60.78 Aligned_cols=73 Identities=10% Similarity=0.014 Sum_probs=51.8
Q ss_pred cEEEecCCCCcchHHHHHH-cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc---c-----hhccccCccEEEe
Q 011690 348 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC---I-----EELVKVDKNGLLF 418 (479)
Q Consensus 348 ~V~f~G~~~~~~~~~~~l~-~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~---~-----~e~i~~~~~G~l~ 418 (479)
++...++ .+++..+|+ .||++|+ -.| ..++.|++++|+|.|...... . .+.+.....+++.
T Consensus 115 ~v~v~~f---~~~m~~~l~~~AdlvIs----haG---agTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~ 184 (224)
T 2jzc_A 115 KVIGFDF---STKMQSIIRDYSDLVIS----HAG---TGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC 184 (224)
T ss_dssp EEEECCS---SSSHHHHHHHHCSCEEE----SSC---HHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE
T ss_pred eEEEeec---cchHHHHHHhcCCEEEE----CCc---HHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc
Confidence 4556666 589999999 9999996 222 348999999999998886532 1 2334333345554
Q ss_pred CCHHHHHHHHHHH
Q 011690 419 SSSSELADQLLML 431 (479)
Q Consensus 419 ~~~~~la~~l~~l 431 (479)
+++.|++++.++
T Consensus 185 -~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 -APTETGLIAGLR 196 (224)
T ss_dssp -CSCTTTHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 677788888777
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.72 E-value=0.092 Score=51.53 Aligned_cols=133 Identities=13% Similarity=0.089 Sum_probs=78.8
Q ss_pred CCCeEEEEEecCCCCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 339 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~--~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~ 339 (479)
+++.+++..|.=.+.|... .+.+.++.+.+ .+.++++.+.++....+.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~ 227 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAK 227 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHH
Confidence 4455666666444555544 56666655532 2577777643443333333
Q ss_pred HHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcccc-CccEEEe
Q 011690 340 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-DKNGLLF 418 (479)
Q Consensus 340 ~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~-~~~G~l~ 418 (479)
.+.+. .+++.+.|. .+-.+...+++.||++|.. .+| ..-+ |.|+|+|+|+--.+..++.... +....++
T Consensus 228 ~i~~~-~~~~~l~g~-~sl~el~ali~~a~l~I~~---DSG----~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~ 297 (326)
T 2gt1_A 228 RLAEG-FAYVEVLPK-MSLEGVARVLAGAKFVVSV---DTG----LSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVC 297 (326)
T ss_dssp HHHTT-CTTEEECCC-CCHHHHHHHHHTCSEEEEE---SSH----HHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEE
T ss_pred HHHhh-CCcccccCC-CCHHHHHHHHHhCCEEEec---CCc----HHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEe
Confidence 33321 345778897 8999999999999999975 344 2445 6679999998743322222111 1111211
Q ss_pred ---------CCHHHHHHHHHHHHh
Q 011690 419 ---------SSSSELADQLLMLFK 433 (479)
Q Consensus 419 ---------~~~~~la~~l~~l~~ 433 (479)
-+++++.+++.++++
T Consensus 298 ~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 298 RAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp ECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred cCCcccccCCCHHHHHHHHHHHHH
Confidence 147788888887776
No 65
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=92.62 E-value=1.1 Score=49.82 Aligned_cols=143 Identities=14% Similarity=0.156 Sum_probs=97.4
Q ss_pred CeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccC-----CCCEEEEEEecCC-ChH-
Q 011690 264 PALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL-----YPRLLFIITGKGP-DKE- 335 (479)
Q Consensus 264 ~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~l~IvG~G~-~~~- 335 (479)
.++++.+-|++..|-... ++..+..+.+- ....+.|+-.. .....+++.|+-. .-.
T Consensus 600 sLfdvq~KR~heYKRq~LniL~ii~ry~~I----------------k~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~ 663 (879)
T 1ygp_A 600 TLFDMQVKRIHEYKRQQLNVFGIIYRYLAM----------------KNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYM 663 (879)
T ss_dssp CEEEEEESCCCGGGTHHHHHHHHHHHHHHH----------------HHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHH
T ss_pred eeeeeeeehhhHhHHHHHHHHHHHHHHHHH----------------HhCccccCCCcccccCCCCeEEEEeccCCCCcHH
Confidence 368999999999999888 66666655431 11110110000 2348999999752 222
Q ss_pred --HHHHHHHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 336 --SYEEKIRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 336 --~l~~~~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+.+.+... .+ + +|.|+-. ....-...++.+||+-.--++. .-|.-|+.=.=+|..|.+.|+|--
T Consensus 664 aK~iIklI~~va~~iN~Dp~v~~~LKVVFlen-Y~VslAe~iipaaDvseqista-g~EASGTsnMKfalNGaLtlgtlD 741 (879)
T 1ygp_A 664 AKLIIKLINCVADIVNNDESIEHLLKVVFVAD-YNVSKAEIIIPASDLSEHISTA-GTEASGTSNMKFVMNGGLIIGTVD 741 (879)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGTTSEEEEEETT-CCHHHHHHHGGGCSEEEECCCT-TCCSCCHHHHHHHTTTCEEEEESC
T ss_pred HHHHHHHHHHHHHHhccChhhCCceEEEEeCC-CCHHHHHHhhhhhhhhhhCCCC-CccccCchhhHHHHcCCeeeeccc
Confidence 222222222 13 3 6999987 7888899999999999975433 456678888889999999999998
Q ss_pred ccchhcccc--CccEEEeC-CHHHH
Q 011690 403 SCIEELVKV--DKNGLLFS-SSSEL 424 (479)
Q Consensus 403 ~~~~e~i~~--~~~G~l~~-~~~~l 424 (479)
|+.-|+.+. .+|+|+|+ +.+++
T Consensus 742 GanvEi~e~vG~eN~fiFG~~~~ev 766 (879)
T 1ygp_A 742 GANVEITREIGEDNVFLFGNLSENV 766 (879)
T ss_dssp THHHHHHHHHCGGGSEEESCCHHHH
T ss_pred chhHHHHHHcCcccEEEccCCHHHH
Confidence 998888876 56999994 44443
No 66
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=61.11 E-value=29 Score=28.54 Aligned_cols=66 Identities=17% Similarity=0.072 Sum_probs=47.4
Q ss_pred cCCCCEEEEEEecC--CChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC
Q 011690 318 YLYPRLLFIITGKG--PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL 395 (479)
Q Consensus 318 ~~~p~~~l~IvG~G--~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~ 395 (479)
....+..++|.|.= -.++++++.++++|- .+.+. |+ ...|++|+- ... -+.|+-.|...|+
T Consensus 31 ~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg---~v~~s-VS--------kkTd~LV~G----~~~-g~sK~~kA~~lgI 93 (109)
T 2k6g_A 31 NCLEGLIFVITGVLESIERDEAKSLIERYGG---KVTGN-VS--------KKTNYLVMG----RDS-GQSKSDKAAALGT 93 (109)
T ss_dssp TTTTTCEEEEESBCSSCCHHHHHHHHHHTTC---EEESS-CC--------TTCCEEEEC----BCC-CHHHHHHHHHHTC
T ss_pred CCCCCCEEEEeeeCCCCCHHHHHHHHHHcCC---EeeCc-cc--------CCceEEEEC----CCC-ChHHHHHHHHcCC
Confidence 34678999999954 368999999999873 34565 44 356888863 111 1479999999999
Q ss_pred cEEEe
Q 011690 396 PVCAV 400 (479)
Q Consensus 396 PVIas 400 (479)
|||.-
T Consensus 94 ~Ii~E 98 (109)
T 2k6g_A 94 KIIDE 98 (109)
T ss_dssp EEECH
T ss_pred eEEeH
Confidence 99854
No 67
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=59.49 E-value=15 Score=34.24 Aligned_cols=79 Identities=11% Similarity=-0.045 Sum_probs=48.1
Q ss_pred EEEEEEecCC-------ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-------CCCCCcHHHH
Q 011690 323 LLFIITGKGP-------DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVV 388 (479)
Q Consensus 323 ~~l~IvG~G~-------~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-------~~e~~p~~ll 388 (479)
-++.|+..+. ...++.+..+++|. .+..+-. .++..+.+.+||..++|-..+ ...++-..+-
T Consensus 32 ~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~-~~~~v~~---~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~ 107 (229)
T 1fy2_A 32 RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGV-NVTGIHR---VADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMA 107 (229)
T ss_dssp CEEEEECTTCCSSCHHHHHHHHHHHHGGGTC-EEEETTS---SSCHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHH
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEEec---cccHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHH
Confidence 4566666442 22344555556664 3444332 356668889999999983221 1123444677
Q ss_pred HHHhCCCcEEEecCccc
Q 011690 389 DMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 389 Eama~G~PVIas~~~~~ 405 (479)
|+...|+|++.+..|.+
T Consensus 108 ~~~~~G~p~~G~sAG~~ 124 (229)
T 1fy2_A 108 DRVKRGALYIGWSAGAN 124 (229)
T ss_dssp HHHHTTCEEEEETHHHH
T ss_pred HHHHcCCEEEEECHHHH
Confidence 78889999999986653
No 68
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=55.71 E-value=20 Score=33.21 Aligned_cols=84 Identities=14% Similarity=0.132 Sum_probs=43.7
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCC-CCCcccccCCCCeEEEEeecCCCCCCCCCchhHHH
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGG-SKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~-~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~ 78 (479)
|.+++|+.|+++|. ..-++.....+... .+++|..|.... +..........||+++.++ +. .+..
T Consensus 5 ~~~~~ri~vl~SG~---gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~--~~---~~~~----- 71 (215)
T 3kcq_A 5 MKKELRVGVLISGR---GSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVK--RK---PLDI----- 71 (215)
T ss_dssp --CCEEEEEEESSC---CHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECC--BT---TBCH-----
T ss_pred CCCCCEEEEEEECC---cHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeC--cc---cCCh-----
Confidence 66777888888764 23333333333222 235766554432 2222234456799998887 21 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Q 011690 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQN 109 (479)
Q Consensus 79 ~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~ 109 (479)
..+...+.+ .+||+|.+-.
T Consensus 72 ~~~~~~L~~------------~~~Dlivlag 90 (215)
T 3kcq_A 72 EHISTVLRE------------HDVDLVCLAG 90 (215)
T ss_dssp HHHHHHHHH------------TTCSEEEESS
T ss_pred HHHHHHHHH------------hCCCEEEEeC
Confidence 233344444 8999988776
No 69
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=55.23 E-value=17 Score=34.20 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=13.9
Q ss_pred HHHHHhhCCCcEEEEecCCC
Q 011690 25 ALSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 25 a~~La~~~G~eV~Vv~~~~~ 44 (479)
...++++ |++|+|++...+
T Consensus 24 ia~~~~~-G~~V~vv~lT~G 42 (242)
T 2ixd_A 24 IAKYTKQ-GYEVGICDLTEA 42 (242)
T ss_dssp HHHHHHT-TCCEEEEEEECC
T ss_pred HHHHHHC-CCeEEEEEEcCC
Confidence 4566675 999999986543
No 70
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=54.82 E-value=11 Score=34.54 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=42.7
Q ss_pred chHHHHHHcCCEEEEcccCCCCCCCc--HHHHHHHhCCCcEEEecCcc-chhcc----ccC-------ccEEEe-CCHHH
Q 011690 359 EDYPLLLGSADLGVCLHTSSSGLDLP--MKVVDMFGCGLPVCAVSYSC-IEELV----KVD-------KNGLLF-SSSSE 423 (479)
Q Consensus 359 ~~~~~~l~~adi~v~p~~~s~~e~~p--~~llEama~G~PVIas~~~~-~~e~i----~~~-------~~G~l~-~~~~~ 423 (479)
+--.-+...||.+|+. ..+ +| ..+.|++..|+||++.+..+ ....+ .++ ...+.+ +|+++
T Consensus 110 ~Rk~~m~~~sda~Ivl---pGG--~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee 184 (195)
T 1rcu_A 110 MRSFVLLRNADVVVSI---GGE--IGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEE 184 (195)
T ss_dssp HHHHHHHTTCSEEEEE---SCC--HHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHH
T ss_pred HHHHHHHHhCCEEEEe---cCC--CcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHH
Confidence 3445566788998876 333 44 47889999999999997443 33222 211 112333 88999
Q ss_pred HHHHHHH
Q 011690 424 LADQLLM 430 (479)
Q Consensus 424 la~~l~~ 430 (479)
+.+.|.+
T Consensus 185 ~~~~l~~ 191 (195)
T 1rcu_A 185 AVQIIEQ 191 (195)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8887754
No 71
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=51.44 E-value=1e+02 Score=26.93 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=38.7
Q ss_pred HHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc--EEEe---CCHHHHHHHHHHHH
Q 011690 362 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN--GLLF---SSSSELADQLLMLF 432 (479)
Q Consensus 362 ~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~--G~l~---~~~~~la~~l~~l~ 432 (479)
.+.+..||++|.-.. ....|-..-+-=|.+.|+||++-.... .+-++....+ -+.+ ++ +++.+.|.+.+
T Consensus 63 ~~~i~~aD~vvA~l~-~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f~ 140 (152)
T 4fyk_A 63 LNWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRYF 140 (152)
T ss_dssp HHHHHHCSEEEEECS-SCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCC-CCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHHH
Confidence 356889999987422 222222223444789999999943322 2323322221 1222 55 77777777777
Q ss_pred h
Q 011690 433 K 433 (479)
Q Consensus 433 ~ 433 (479)
+
T Consensus 141 ~ 141 (152)
T 4fyk_A 141 E 141 (152)
T ss_dssp C
T ss_pred H
Confidence 6
No 72
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=49.54 E-value=2.3e+02 Score=28.92 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=61.1
Q ss_pred EEEEEEecCC--------------------ChHHHHHHHHHcCCCcEEEecCCCCcchHHH--HHHcCCEEEEcccCCCC
Q 011690 323 LLFIITGKGP--------------------DKESYEEKIRRLRLKRVAFRTMWLSAEDYPL--LLGSADLGVCLHTSSSG 380 (479)
Q Consensus 323 ~~l~IvG~G~--------------------~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~--~l~~adi~v~p~~~s~~ 380 (479)
-+.+|+|.|. +.+..++.++++. +-+.+.|- -+..++.. =+..+|+++.. +. .-
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~-~~~Vi~GD-~td~~~L~ee~i~~~D~~ia~-T~-~D 311 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELE-NTIVFCGD-AADQELLTEENIDQVDVFIAL-TN-ED 311 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCT-TSEEEESC-TTCHHHHHHTTGGGCSEEEEC-CS-CH
T ss_pred cEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCC-CceEEecc-ccchhhHhhcCchhhcEEEEc-cc-Cc
Confidence 4778888773 2334445555542 33556676 33333322 35778999975 22 22
Q ss_pred CCCcHHHHHHHhCCCcEEEec--CccchhccccCccEEEeCCHHHHHHHHHHHHh
Q 011690 381 LDLPMKVVDMFGCGLPVCAVS--YSCIEELVKVDKNGLLFSSSSELADQLLMLFK 433 (479)
Q Consensus 381 e~~p~~llEama~G~PVIas~--~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~ 433 (479)
|..=+..+-|-.+|+|=+.+. .....++++...-..+++.....++.|.+.+.
T Consensus 312 e~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~gid~visp~~~~a~~I~~~i~ 366 (461)
T 4g65_A 312 ETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVR 366 (461)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSSSSCEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccccccchhhhhhccccceeeCHHHHHHHHHHHHhh
Confidence 323346667778898855553 44456667554445555555566777766655
No 73
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=48.13 E-value=81 Score=30.50 Aligned_cols=84 Identities=11% Similarity=0.082 Sum_probs=53.9
Q ss_pred CEEEEEEec--CC---ChHHHHHHHHHcCCCcEEEecCC----CCcchHHHHHHcCCEEEEcccCC-------CCCCCcH
Q 011690 322 RLLFIITGK--GP---DKESYEEKIRRLRLKRVAFRTMW----LSAEDYPLLLGSADLGVCLHTSS-------SGLDLPM 385 (479)
Q Consensus 322 ~~~l~IvG~--G~---~~~~l~~~~~~~~l~~V~f~G~~----~~~~~~~~~l~~adi~v~p~~~s-------~~e~~p~ 385 (479)
+-++.++.. +. +.+.+.+..+++|.+.|..+--. .+.+++.+.+..||+..++-..+ ..-++-.
T Consensus 56 ~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~ 135 (291)
T 3en0_A 56 DAIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMD 135 (291)
T ss_dssp GCEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHH
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHH
Confidence 456666653 22 23566777788888777665420 12346788999999999863221 2223344
Q ss_pred HHHHHHhCC-CcEEEecCccc
Q 011690 386 KVVDMFGCG-LPVCAVSYSCI 405 (479)
Q Consensus 386 ~llEama~G-~PVIas~~~~~ 405 (479)
.+-|+...| +|++.++.|++
T Consensus 136 ~L~~~~~~G~~~~~GtSAGA~ 156 (291)
T 3en0_A 136 RIRQRVHNGEISLAGTSAGAA 156 (291)
T ss_dssp HHHHHHHTTSSEEEEETHHHH
T ss_pred HHHHHHHCCCeEEEEeCHHHH
Confidence 777888899 99999987653
No 74
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=47.70 E-value=31 Score=30.56 Aligned_cols=68 Identities=22% Similarity=0.286 Sum_probs=42.2
Q ss_pred HHHHcCCEEEEcccCCCCCCCcHHHHH---HHhCCCcEEEec-----Cccc--------hhcccc-------------Cc
Q 011690 363 LLLGSADLGVCLHTSSSGLDLPMKVVD---MFGCGLPVCAVS-----YSCI--------EELVKV-------------DK 413 (479)
Q Consensus 363 ~~l~~adi~v~p~~~s~~e~~p~~llE---ama~G~PVIas~-----~~~~--------~e~i~~-------------~~ 413 (479)
..+..||++|... .....+ +.+.+| |.+.|+||++.. .|+. .|+.++ ..
T Consensus 65 ~~i~~aD~viA~l-dg~~~D-~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~ 142 (162)
T 3ehd_A 65 ENVLASDLLVALL-DGPTID-AGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKL 142 (162)
T ss_dssp HHHHTCSEEEEEC-CSSSCC-HHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHT
T ss_pred HHHHHCCEEEEEC-CCCCCC-CCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHh
Confidence 4588999988742 111112 224555 789999999873 1221 122221 12
Q ss_pred cEEEeCCHHHHHHHHHHHH
Q 011690 414 NGLLFSSSSELADQLLMLF 432 (479)
Q Consensus 414 ~G~l~~~~~~la~~l~~l~ 432 (479)
+|.++.+.+++.+.|.+.+
T Consensus 143 ~g~~~~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 143 NGRVVSSEEDLLEEIKQRL 161 (162)
T ss_dssp TEEEESSHHHHHHHHHHTC
T ss_pred CCeEEeCHHHHHHHHHHHh
Confidence 8999999999998887654
No 75
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=46.45 E-value=40 Score=30.96 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=30.9
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCC-CCCcccccCCCCeEEEEee
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGG-SKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~-~~~~~~~~~~~gi~i~~~~ 62 (479)
+|+++.|++.|. ..-++.....+... .+++|..|.... ..+........||+++.++
T Consensus 2 ~m~ki~vl~sG~---g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~ 60 (212)
T 3av3_A 2 HMKRLAVFASGS---GTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFS 60 (212)
T ss_dssp CCEEEEEECCSS---CHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred CCcEEEEEEECC---cHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeC
Confidence 456777777654 23334434444443 257876554342 2222233456789988876
No 76
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.19 E-value=36 Score=28.22 Aligned_cols=74 Identities=19% Similarity=0.140 Sum_probs=50.6
Q ss_pred hhccCcccCCCCEEEEEEecC--CChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHH
Q 011690 311 EISDGKQYLYPRLLFIITGKG--PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV 388 (479)
Q Consensus 311 ~~~~~~~~~~p~~~l~IvG~G--~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ll 388 (479)
++-.+....+.+..|+|.|.= -.+++++++++++|- .+.+. |+ ...|++|+- ... -+.|+-
T Consensus 14 ~~P~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg---kv~~s-VS--------kkTd~LV~G----~~~-g~sKl~ 76 (112)
T 2ebu_A 14 EIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGG---KVTGN-VS--------KKTNYLVMG----RDS-GQSKSD 76 (112)
T ss_dssp CCCCCCSSSSTTCEEEECSCCSSSCHHHHHHHHHHTTC---EECSS-CC--------SSCCEEEEC----SSC-CSHHHH
T ss_pred cCCCCCCCCcCCCEEEEeeeCCCCCHHHHHHHHHHcCC---EEecc-cc--------CCeeEEEec----CCC-ChHHHH
Confidence 333444445678999999953 468999999999873 23454 33 356888863 111 247999
Q ss_pred HHHhCCCcEEEec
Q 011690 389 DMFGCGLPVCAVS 401 (479)
Q Consensus 389 Eama~G~PVIas~ 401 (479)
.|...|+|||.-+
T Consensus 77 KA~~lgI~IisE~ 89 (112)
T 2ebu_A 77 KAAALGTKIIDED 89 (112)
T ss_dssp HHHHHTCEEEEHH
T ss_pred HHHHcCCeEEeHH
Confidence 9999999998653
No 77
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=45.10 E-value=40 Score=33.38 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=62.3
Q ss_pred EEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCc-chHHHHHHcCCEE--EEcccCC-CCC--CCc-HHHHHHHhCCC
Q 011690 323 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSA-EDYPLLLGSADLG--VCLHTSS-SGL--DLP-MKVVDMFGCGL 395 (479)
Q Consensus 323 ~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~-~~~~~~l~~adi~--v~p~~~s-~~e--~~p-~~llEama~G~ 395 (479)
+.+.. |.....+.+.+.+..++.++|- .|.++.. .+..+.++...+. +||...- .+. +++ -.+-+.+..|+
T Consensus 196 ~~~Ha-gE~~~~~~i~~al~~lg~~rIg-Hgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv 273 (343)
T 3rys_A 196 RIAHA-GEEGPASYITEALDVLHVERID-HGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLPEMLAIGL 273 (343)
T ss_dssp EEEEE-SSSSCHHHHHHHHHTSCCSEEE-ECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSCGGGCSHHHHHHTTC
T ss_pred EEEee-CCCCCHHHHHHHHhcCCcceee-eeeeecCChHHHHHHHhcCCCeeEchhHHHHhCCCCCcccchHHHHHHCCC
Confidence 44443 5433445666666556666654 6765654 4677778777664 6662111 111 221 14678899999
Q ss_pred cEEE-ecCccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 396 PVCA-VSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 396 PVIa-s~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
||.. ||.++.. + + +-.+++..+.... .. +.+.+..+..|+.+.
T Consensus 274 ~V~l~TDdp~~~-----~--~---~l~~E~~~a~~~~-~l---~~~~l~~l~~nsi~~ 317 (343)
T 3rys_A 274 NVCVNSDDPAYF-----G--G---YVDDNFEQLVKVL-EF---SVPEQATLAANSIRS 317 (343)
T ss_dssp CEEECCBSTTTT-----T--C---CHHHHHHHHHHHH-CC---CHHHHHHHHHHHHHH
T ss_pred eEEEeCCCcccc-----C--C---CHHHHHHHHHHHc-CC---CHHHHHHHHHHHHHH
Confidence 9754 4544432 0 1 1133444433332 22 577788888888774
No 78
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=43.70 E-value=2.1e+02 Score=26.80 Aligned_cols=110 Identities=11% Similarity=0.110 Sum_probs=69.0
Q ss_pred cEEEecCCCCcchHHHHHHcCCEEEEcccCC-CCCCCcHHHHHHHhCCCcEEEecCccch-hccccCccEEEeCCHHHHH
Q 011690 348 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIE-ELVKVDKNGLLFSSSSELA 425 (479)
Q Consensus 348 ~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~llEama~G~PVIas~~~~~~-e~i~~~~~G~l~~~~~~la 425 (479)
-=.|.|. ++..++.+-=+.|=..++.-... ..-.+-..+.|+||+---...-..-... .++ ++ .-|.+++-.+|.
T Consensus 231 ~pvf~gk-i~~~~~~~~ns~a~a~~i~gdk~y~~n~it~rvwe~~as~av~~~d~~fd~~~~i~-~~-a~fyv~nr~eli 307 (351)
T 1jg7_A 231 APVFTGK-IPMNMVSEKNSQAIAALIIGDKNYNDNFITLRVWETMASDAVMLIDEEFDTKHRII-ND-ARFYVNNRAELI 307 (351)
T ss_dssp CCEEEEC-CCGGGHHHHHTTEEEEEECCCGGGTTTCCCHHHHHHHTSSSEEEEEGGGCTTCCSC-SC-GGGEECSHHHHH
T ss_pred CCccCCc-CCHHHHhhccccceEEEEeccccccCCeecHHHHHHHhhhhHhhhhcccCcccccc-cC-ceeEecCHHHHH
Confidence 4568998 99998888777776666542222 2222456899999987655554433332 344 33 347889999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHH---HHH-h-hhhhchHHHHHH
Q 011690 426 DQLLMLFKGFPDDSDVLKKLRNG---TLE-M-GLSARWATEWEE 464 (479)
Q Consensus 426 ~~l~~l~~~~~~~~~~~~~~~~~---~~~-~-~~~~~w~~~~~~ 464 (479)
+.+.++-. ++..|..+-.. ..+ . ..+..|..++++
T Consensus 308 d~in~~k~----~~~~r~e~l~~qh~il~k~~~~k~~wq~~fkk 347 (351)
T 1jg7_A 308 DRVNELKH----SDVLRKEMLSIQHDILNKTRAKKAEWQDAFKK 347 (351)
T ss_dssp HHHHHHHH----CHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHhhccc----hHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 99999987 46666554222 111 1 135566666554
No 79
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=42.65 E-value=52 Score=28.76 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=38.9
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCccccc--CCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 011690 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAIL--EHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (479)
Q Consensus 20 r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~--~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~ 97 (479)
-..+.|..|+++ |++|.++-........... ...++++...+ . ..+...+.. +
T Consensus 18 ~a~~la~~la~~-g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~--~-------------~~l~~~l~~-------l-- 72 (206)
T 4dzz_A 18 AVINIATALSRS-GYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAA--S-------------EKDVYGIRK-------D-- 72 (206)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHTTSCCSSEEEECC--S-------------HHHHHTHHH-------H--
T ss_pred HHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHhcCCCCCcEEecC--c-------------HHHHHHHHH-------h--
Confidence 344567778885 9999999765433221221 12334443332 0 111222222 1
Q ss_pred hcCCCcEEEEeCCCCcchH
Q 011690 98 KIASPDVFLVQNPPSVPTL 116 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~ 116 (479)
..++|+|++-+||.....
T Consensus 73 -~~~yD~viiD~~~~~~~~ 90 (206)
T 4dzz_A 73 -LADYDFAIVDGAGSLSVI 90 (206)
T ss_dssp -TTTSSEEEEECCSSSSHH
T ss_pred -cCCCCEEEEECCCCCCHH
Confidence 157999999999887543
No 80
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=42.51 E-value=97 Score=25.34 Aligned_cols=115 Identities=17% Similarity=0.086 Sum_probs=57.5
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|+++ |++|.++...... . ......+++++... .. . .. .+.+. ...+.
T Consensus 20 ~la~~L~~~-g~~V~~id~~~~~-~-~~~~~~~~~~~~gd--~~------~-~~-------~l~~~---------~~~~~ 71 (141)
T 3llv_A 20 GLVRELTAA-GKKVLAVDKSKEK-I-ELLEDEGFDAVIAD--PT------D-ES-------FYRSL---------DLEGV 71 (141)
T ss_dssp HHHHHHHHT-TCCEEEEESCHHH-H-HHHHHTTCEEEECC--TT------C-HH-------HHHHS---------CCTTC
T ss_pred HHHHHHHHC-CCeEEEEECCHHH-H-HHHHHCCCcEEECC--CC------C-HH-------HHHhC---------CcccC
Confidence 346777775 9999999754321 1 11223455544433 11 1 11 11110 12578
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|++++..+..-....+...++.....+++...++..+ . +.+...-+|.++......
T Consensus 72 d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~~~~~-------------~-----------~~l~~~G~~~vi~p~~~~ 127 (141)
T 3llv_A 72 SAVLITGSDDEFNLKILKALRSVSDVYAIVRVSSPKK-------------K-----------EEFEEAGANLVVLVADAV 127 (141)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCCCCEEEEESCGGG-------------H-----------HHHHHTTCSEEEEHHHHH
T ss_pred CEEEEecCCHHHHHHHHHHHHHhCCceEEEEEcChhH-------------H-----------HHHHHcCCCEEECHHHHH
Confidence 9888877543333444445554443444444443321 0 111112478888877777
Q ss_pred HHHHHHh
Q 011690 183 QHELAQN 189 (479)
Q Consensus 183 ~~~l~~~ 189 (479)
...+.+.
T Consensus 128 ~~~l~~~ 134 (141)
T 3llv_A 128 KQAFMDK 134 (141)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666554
No 81
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=41.86 E-value=26 Score=33.68 Aligned_cols=78 Identities=12% Similarity=0.072 Sum_probs=51.7
Q ss_pred EEEEEEe-cCCChHHHHHHHHHcCCCcEEEecCCCC-----------------------cchHHHHHHcCCEEEEcccCC
Q 011690 323 LLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLS-----------------------AEDYPLLLGSADLGVCLHTSS 378 (479)
Q Consensus 323 ~~l~IvG-~G~~~~~l~~~~~~~~l~~V~f~G~~~~-----------------------~~~~~~~l~~adi~v~p~~~s 378 (479)
+++.|+| .|..-..+.+.+.+. +.+.+.+. ++ .+++.+++..+|+.|-. +
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~-~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDf---T 81 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAA--PDATLVGA-LDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDF---T 81 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHC--TTEEEEEE-BCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEEC---S
T ss_pred cEEEEECCCCHHHHHHHHHHHhC--CCCEEEEE-EEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEc---C
Confidence 7889999 887777777766653 34555543 22 25788889999999864 2
Q ss_pred CCCCCcHHHHHHHhCCCcEEEecCccch
Q 011690 379 SGLDLPMKVVDMFGCGLPVCAVSYSCIE 406 (479)
Q Consensus 379 ~~e~~p~~llEama~G~PVIas~~~~~~ 406 (479)
.......-+-.++..|+|+|....|-..
T Consensus 82 ~p~a~~~~~~~al~~G~~vVigTTG~s~ 109 (272)
T 4f3y_A 82 LPEGTLVHLDAALRHDVKLVIGTTGFSE 109 (272)
T ss_dssp CHHHHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 2222223456788999999987666433
No 82
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=41.44 E-value=1.3e+02 Score=26.38 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=69.6
Q ss_pred CCEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHH---------------cCCEEEEcccCCCCCCCc
Q 011690 321 PRLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG---------------SADLGVCLHTSSSGLDLP 384 (479)
Q Consensus 321 p~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~---------------~adi~v~p~~~s~~e~~p 384 (479)
...+++|+-+.+ ..+.+.+..++.|...|..... .++..+++. ..|++++=... ...-|
T Consensus 60 ~~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~---~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~l--p~~~G 134 (206)
T 3mm4_A 60 RGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDS---GKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQM--PEMDG 134 (206)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESS---HHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCC--SSSCH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCC---HHHHHHHHHhhcccccccccccCCCCCEEEEcCCC--CCCCH
Confidence 457888888764 3456677777777655665554 677777665 46888863111 11234
Q ss_pred HHHHHHHh-------CCCcEEEecCcc-----chhccccCccEEEeCCHHHHHHHHHHHHhc
Q 011690 385 MKVVDMFG-------CGLPVCAVSYSC-----IEELVKVDKNGLLFSSSSELADQLLMLFKG 434 (479)
Q Consensus 385 ~~llEama-------~G~PVIas~~~~-----~~e~i~~~~~G~l~~~~~~la~~l~~l~~~ 434 (479)
..+++.+- ..+|||...... ..+.++.|..+++.++.++|.+.|..++..
T Consensus 135 ~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~~L~~~i~~~l~~ 196 (206)
T 3mm4_A 135 YEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLNQLANVIREIESK 196 (206)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCTTHHHHHHHHC--
T ss_pred HHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHHHHHHHHHHHHhh
Confidence 46666553 568887765322 235566788899997766888888888873
No 83
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=39.53 E-value=22 Score=31.15 Aligned_cols=41 Identities=24% Similarity=0.243 Sum_probs=29.4
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhhCCC--cEEEEec
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSL--EVDVVAY 41 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~--eV~Vv~~ 41 (479)
|..+++++.||.|++-||+-.+.....++.+.|. .+.|.+.
T Consensus 1 m~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SA 43 (163)
T 1u2p_A 1 MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSA 43 (163)
T ss_dssp ---CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEE
T ss_pred CCCCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEec
Confidence 7777789999999999999988888777765443 3666653
No 84
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=39.50 E-value=22 Score=32.52 Aligned_cols=69 Identities=13% Similarity=0.026 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCCcEEEecCC-CCcchHHHHHHcCCEEEEcccCC-------CCCCCcHHHHHHHhCCCcEEEecCcc
Q 011690 335 ESYEEKIRRLRLKRVAFRTMW-LSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVVDMFGCGLPVCAVSYSC 404 (479)
Q Consensus 335 ~~l~~~~~~~~l~~V~f~G~~-~~~~~~~~~l~~adi~v~p~~~s-------~~e~~p~~llEama~G~PVIas~~~~ 404 (479)
+++++..+++|. .+..+.-. -+.++..+.+.+||..++|-..+ ...++-..+-|+...|+|++.+..|.
T Consensus 47 ~s~~~a~~~lG~-~v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa 123 (206)
T 3l4e_A 47 EAGKKALESLGL-LVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGA 123 (206)
T ss_dssp HHHHHHHHHTTC-EEEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHH
T ss_pred HHHHHHHHHcCC-eEEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHH
Confidence 456667777776 35554200 13667778999999999972211 11123346778888999999998665
No 85
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=38.63 E-value=17 Score=32.73 Aligned_cols=66 Identities=12% Similarity=0.025 Sum_probs=42.9
Q ss_pred HHHHcCCEEEEcccCCCCCCCc--HHHHHHHhCCCcEEEecCccc-hhccccC-ccEEE-eCCHHHHHHHHHHHHh
Q 011690 363 LLLGSADLGVCLHTSSSGLDLP--MKVVDMFGCGLPVCAVSYSCI-EELVKVD-KNGLL-FSSSSELADQLLMLFK 433 (479)
Q Consensus 363 ~~l~~adi~v~p~~~s~~e~~p--~~llEama~G~PVIas~~~~~-~e~i~~~-~~G~l-~~~~~~la~~l~~l~~ 433 (479)
-+...||.+|+. ..+ +| ..+.|++..++||++.+.-+. ...+.+. ...+. ++|++++.+.|.+.+.
T Consensus 103 ~m~~~sda~Ivl---pGg--~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 103 INALSSNVLVAV---GMG--PGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp CCGGGCSEEEEE---SCC--HHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEe---cCC--ccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEEEcCCHHHHHHHHHHHHH
Confidence 355668888775 223 44 378888999999999985221 1222222 22333 4889999998888776
No 86
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=38.61 E-value=2e+02 Score=27.63 Aligned_cols=57 Identities=11% Similarity=0.047 Sum_probs=30.9
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCCeEEEEee
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~ 62 (479)
+++|+.|++++. | .-++......... ...+|..|..+.........+..||+++.+|
T Consensus 87 ~~~ri~vl~Sg~-g--~nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~ 144 (287)
T 3nrb_A 87 DRKKVVIMVSKF-D--HCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLP 144 (287)
T ss_dssp CCCEEEEEECSC-C--HHHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECC
T ss_pred CCcEEEEEEeCC-C--cCHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEe
Confidence 467788887664 2 2333222222221 2357666654443212244567899999988
No 87
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=38.34 E-value=82 Score=30.95 Aligned_cols=82 Identities=12% Similarity=0.069 Sum_probs=59.8
Q ss_pred CEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC----------cchHHHHHHcCCEEEE--cccCCCCCCCcHHHHH
Q 011690 322 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS----------AEDYPLLLGSADLGVC--LHTSSSGLDLPMKVVD 389 (479)
Q Consensus 322 ~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~----------~~~~~~~l~~adi~v~--p~~~s~~e~~p~~llE 389 (479)
+-++-|+|-|.....+.+.++..|. +|....+ .+ ..++.++++.||+.++ |.+.+...=+....+.
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg~-~v~~~d~-~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~ 218 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDV-VKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERIS 218 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS-SCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHH
T ss_pred CcEEEEECcchHHHHHHHhhcccCc-eeeecCC-ccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHh
Confidence 4588999999877788888877765 4555554 22 2357889999999876 4344422227889999
Q ss_pred HHhCCCcEEEecCccc
Q 011690 390 MFGCGLPVCAVSYSCI 405 (479)
Q Consensus 390 ama~G~PVIas~~~~~ 405 (479)
.|--|.-+|-+.-|++
T Consensus 219 ~mk~~a~lIN~aRG~i 234 (334)
T 3kb6_A 219 LMKDGVYLINTARGKV 234 (334)
T ss_dssp HSCTTEEEEECSCGGG
T ss_pred hcCCCeEEEecCcccc
Confidence 9999999999887774
No 88
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=38.32 E-value=1e+02 Score=29.74 Aligned_cols=42 Identities=14% Similarity=0.032 Sum_probs=22.3
Q ss_pred CCCcceEEEEEecCCCCC-hhHHHHHHHHHhhCCCcEEEEecCCC
Q 011690 1 MGRRGRACVVVLGDLGRS-PRMQYQALSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~-~r~~~~a~~La~~~G~eV~Vv~~~~~ 44 (479)
|...+++.+|. .+-+.- -++.-....++++ |++|+|++...+
T Consensus 1 m~~~~~vL~v~-AHPDDe~l~~ggtla~~~~~-G~~V~vv~lT~G 43 (303)
T 1q74_A 1 MSETPRLLFVH-AHPDDESLSNGATIAHYTSR-GAQVHVVTCTLG 43 (303)
T ss_dssp --CCCEEEEEE-SSTTHHHHHHHHHHHHHHHT-TCEEEEEESCCC
T ss_pred CCCCCeEEEEE-eCCchHHHhHHHHHHHHHHC-CCcEEEEEEcCC
Confidence 55445554443 554331 1122234566675 999999987643
No 89
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=37.66 E-value=1.8e+02 Score=27.96 Aligned_cols=57 Identities=5% Similarity=0.024 Sum_probs=29.5
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCCeEEEEee
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~ 62 (479)
+++|+.|+++|. ..-++......... ...+|.+|..+.........+..||+++.+|
T Consensus 88 ~~~ri~vl~Sg~---g~nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~ 145 (288)
T 3obi_A 88 TRRKVMLLVSQS---DHCLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFP 145 (288)
T ss_dssp SCEEEEEEECSC---CHHHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECC
T ss_pred CCcEEEEEEcCC---CCCHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeC
Confidence 456788777664 12332222222221 2246555544431122345567899999988
No 90
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=37.50 E-value=1.4e+02 Score=24.31 Aligned_cols=108 Identities=12% Similarity=0.089 Sum_probs=65.5
Q ss_pred CEEEEEEecCC-ChHHHHHHHHHc-CCCcEEEecCCCCcchHHHHHHc---CCEEEEcccCCCCCCCcHHHHHHHh---C
Q 011690 322 RLLFIITGKGP-DKESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGS---ADLGVCLHTSSSGLDLPMKVVDMFG---C 393 (479)
Q Consensus 322 ~~~l~IvG~G~-~~~~l~~~~~~~-~l~~V~f~G~~~~~~~~~~~l~~---adi~v~p~~~s~~e~~p~~llEama---~ 393 (479)
..+++|+.+.+ ..+.++...++. +...|..... .++....+.. .|++++=...... -+..+++.+. .
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~~~---~~~a~~~l~~~~~~dlvi~d~~l~~~--~g~~~~~~l~~~~~ 77 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAET---VSDALAFLEADNTVDLILLDVNLPDA--EAIDGLVRLKRFDP 77 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESS---HHHHHHHHHTTCCCSEEEECC--------CHHHHHHHHHHCT
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCceEEEEecC---HHHHHHHHhccCCCCEEEEeCCCCCC--chHHHHHHHHHhCC
Confidence 36778888654 345566666666 5444555554 7777777766 6888763111111 2334555543 4
Q ss_pred CCcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHhc
Q 011690 394 GLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFKG 434 (479)
Q Consensus 394 G~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~ 434 (479)
.+|||...... ..+.+..|..+++.. +.++|.+.|..++..
T Consensus 78 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 78 SNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEG 124 (154)
T ss_dssp TSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHTT
T ss_pred CCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHHHHHHHcC
Confidence 78888764322 345666788888884 488999999999885
No 91
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=36.92 E-value=73 Score=29.26 Aligned_cols=58 Identities=17% Similarity=0.173 Sum_probs=29.8
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCC-CCCcccccCCCCeEEEEee
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGG-SKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~-~~~~~~~~~~~gi~i~~~~ 62 (479)
|.+ +|+.|+++|. ..-++.....+... ..++|..|.... +.......+..||+++.++
T Consensus 5 m~~-~ri~vl~SG~---gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~ 64 (209)
T 4ds3_A 5 MKR-NRVVIFISGG---GSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFK 64 (209)
T ss_dssp -CC-EEEEEEESSC---CHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred CCC-ccEEEEEECC---cHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeC
Confidence 443 5677777653 23444434444332 235766554432 2222234456799998887
No 92
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=36.75 E-value=95 Score=28.83 Aligned_cols=57 Identities=14% Similarity=0.051 Sum_probs=29.4
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecC-CCCCcccccCCCCeEEEEee
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYG-GSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~-~~~~~~~~~~~~gi~i~~~~ 62 (479)
+|+|+.++++|. ..-.+.....+.+. .+++|..|... +...........||+++.++
T Consensus 21 ~~~rI~~l~SG~---g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~ 79 (229)
T 3auf_A 21 HMIRIGVLISGS---GTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMD 79 (229)
T ss_dssp TCEEEEEEESSC---CHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECC
T ss_pred CCcEEEEEEeCC---cHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEEC
Confidence 445666666553 23344444444443 25676444333 22222234456799998876
No 93
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=35.99 E-value=1.7e+02 Score=23.41 Aligned_cols=107 Identities=9% Similarity=0.142 Sum_probs=67.7
Q ss_pred CEEEEEEecCC-ChHHHHHHHHHcCCC-cEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhC----
Q 011690 322 RLLFIITGKGP-DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC---- 393 (479)
Q Consensus 322 ~~~l~IvG~G~-~~~~l~~~~~~~~l~-~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~---- 393 (479)
..+++|+.+.+ ..+.+++..++.+.. .|..... .++....+.. .|++++= ......-|..+++.+-.
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~a~~~l~~~~~dlii~D--~~l~~~~g~~~~~~lr~~~~~ 79 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDN---GAKALYQVQQAKYDLIILD--IGLPIANGFEVMSAVRKPGAN 79 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESS---HHHHHHHHTTCCCSEEEEC--TTCGGGCHHHHHHHHHSSSTT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECC---HHHHHHHhhcCCCCEEEEe--CCCCCCCHHHHHHHHHhcccc
Confidence 47888888654 345667777776654 3544443 6676666655 4777762 11122234567777654
Q ss_pred -CCcEEEecCcc----chhccccCccEEEe--C-CHHHHHHHHHHHHh
Q 011690 394 -GLPVCAVSYSC----IEELVKVDKNGLLF--S-SSSELADQLLMLFK 433 (479)
Q Consensus 394 -G~PVIas~~~~----~~e~i~~~~~G~l~--~-~~~~la~~l~~l~~ 433 (479)
++|||+..... ..+.++.|..+++. - +.++|.+.|..+++
T Consensus 80 ~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 80 QHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp TTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 67887764332 23556778889998 3 67889888888877
No 94
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=35.78 E-value=1.7e+02 Score=27.83 Aligned_cols=43 Identities=14% Similarity=-0.013 Sum_probs=24.5
Q ss_pred hhHHHH-HHHHHhhCCCcEEEEecCCCCCccc-----ccCCCCeEEEEee
Q 011690 19 PRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAA-----ILEHPSIHIHTMT 62 (479)
Q Consensus 19 ~r~~~~-a~~La~~~G~eV~Vv~~~~~~~~~~-----~~~~~gi~i~~~~ 62 (479)
|.+..+ +..|+++ ||+|.+++......... .....+++++...
T Consensus 20 G~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~D 68 (346)
T 3i6i_A 20 GFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGL 68 (346)
T ss_dssp SHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECC
T ss_pred cHHHHHHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEee
Confidence 444443 5677775 99999998655221111 1123577776665
No 95
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=35.43 E-value=1.4e+02 Score=26.23 Aligned_cols=75 Identities=11% Similarity=0.076 Sum_probs=44.6
Q ss_pred EEEEe-cCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCC---EEEEcccCC-CCCCCcHHHHHHHhCCCcEEE
Q 011690 325 FIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD---LGVCLHTSS-SGLDLPMKVVDMFGCGLPVCA 399 (479)
Q Consensus 325 l~IvG-~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~ad---i~v~p~~~s-~~e~~p~~llEama~G~PVIa 399 (479)
+.|+- .+.....+.+..+++|.. +..+....+.+++.+.+...| +++.|-..+ ...++-..+++++..|+||++
T Consensus 3 i~iiDn~~s~~~~i~~~l~~~G~~-~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~~~~~~~~~l~~~~~~~~PilG 81 (192)
T 1i1q_B 3 ILLLDNIDSFTWNLADQLRTNGHN-VVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIG 81 (192)
T ss_dssp EEEEECSCSSHHHHHHHHHHTTCE-EEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEE
T ss_pred EEEEECCccHHHHHHHHHHHCCCe-EEEEECCCCHHHHHHHhhhccCCeEEECCCCcCchhCchHHHHHHHHhcCCCEEE
Confidence 34444 345666778888888754 333333134466666665444 666653222 112344578888889999998
Q ss_pred e
Q 011690 400 V 400 (479)
Q Consensus 400 s 400 (479)
.
T Consensus 82 I 82 (192)
T 1i1q_B 82 I 82 (192)
T ss_dssp E
T ss_pred E
Confidence 6
No 96
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=34.78 E-value=2e+02 Score=23.93 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=68.1
Q ss_pred CCEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHh-----
Q 011690 321 PRLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFG----- 392 (479)
Q Consensus 321 p~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama----- 392 (479)
.++++.||-+.+ .++.+++..++.|...|..-.. .++..+.+.. -|+.++=. .-..--|..+++.+-
T Consensus 11 k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~---g~~al~~~~~~~~DlillD~--~MP~mdG~el~~~ir~~~~~ 85 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADD---GLTALPMLKKGDFDFVVTDW--NMPGMQGIDLLKNIRADEEL 85 (134)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESS---HHHHHHHHHHHCCSEEEEES--CCSSSCHHHHHHHHHHSTTT
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECC---HHHHHHHHHhCCCCEEEEcC--CCCCCCHHHHHHHHHhCCCC
Confidence 357888887654 3455666777777665654433 5555555554 47777521 111113557777763
Q ss_pred CCCcEEEecC-ccc---hhccccCccEEEeCC--HHHHHHHHHHHHh
Q 011690 393 CGLPVCAVSY-SCI---EELVKVDKNGLLFSS--SSELADQLLMLFK 433 (479)
Q Consensus 393 ~G~PVIas~~-~~~---~e~i~~~~~G~l~~~--~~~la~~l~~l~~ 433 (479)
..+|||.... +.. .+..+.|.++|+.++ +++|.+.+.++++
T Consensus 86 ~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 5689887653 332 345667889999964 8899999988875
No 97
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=34.25 E-value=31 Score=33.51 Aligned_cols=78 Identities=13% Similarity=0.023 Sum_probs=51.4
Q ss_pred CEEEEEEe-cCCChHHHHHHHHHcCCCcEEEecCCCCc------------------------chHHHHHHcCCEEEEccc
Q 011690 322 RLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSA------------------------EDYPLLLGSADLGVCLHT 376 (479)
Q Consensus 322 ~~~l~IvG-~G~~~~~l~~~~~~~~l~~V~f~G~~~~~------------------------~~~~~~l~~adi~v~p~~ 376 (479)
.+++.|+| .|..-..+.+.+.+. +.+.+.|. +.. .++.+++..+|+.|-.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~-vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDF-- 95 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR--KDVELCAV-LVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDF-- 95 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEE-BCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEEC--
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEE-EecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEc--
Confidence 38999999 887777777666543 45555554 322 2678889999999853
Q ss_pred CCCCCCCcHHHHHHHhCCCcEEEecCccc
Q 011690 377 SSSGLDLPMKVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 377 ~s~~e~~p~~llEama~G~PVIas~~~~~ 405 (479)
+.......-+..++..|+|+|....|-.
T Consensus 96 -T~p~a~~~~~~~~l~~Gv~vViGTTG~~ 123 (288)
T 3ijp_A 96 -SQPQASVLYANYAAQKSLIHIIGTTGFS 123 (288)
T ss_dssp -SCHHHHHHHHHHHHHHTCEEEECCCCCC
T ss_pred -CCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 2222122234567889999998766543
No 98
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.39 E-value=1.8e+02 Score=23.01 Aligned_cols=106 Identities=9% Similarity=-0.043 Sum_probs=65.6
Q ss_pred EEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhC-----C
Q 011690 323 LLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC-----G 394 (479)
Q Consensus 323 ~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~-----G 394 (479)
.+++|+.+.+ ..+.+++..++.|.. |..... .++....+.. .|++++=. .....-+..+++.+.. .
T Consensus 7 ~~iLivdd~~~~~~~l~~~l~~~g~~-v~~~~~---~~~a~~~l~~~~~dlvi~d~--~l~~~~g~~~~~~l~~~~~~~~ 80 (140)
T 3grc_A 7 PRILICEDDPDIARLLNLMLEKGGFD-SDMVHS---AAQALEQVARRPYAAMTVDL--NLPDQDGVSLIRALRRDSRTRD 80 (140)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCE-EEEECS---HHHHHHHHHHSCCSEEEECS--CCSSSCHHHHHHHHHTSGGGTT
T ss_pred CCEEEEcCCHHHHHHHHHHHHHCCCe-EEEECC---HHHHHHHHHhCCCCEEEEeC--CCCCCCHHHHHHHHHhCcccCC
Confidence 5777887654 345566666666543 444443 6666666654 47777621 1122235577777654 7
Q ss_pred CcEEEecCccc----h-hccccCccEEEeC--CHHHHHHHHHHHHhc
Q 011690 395 LPVCAVSYSCI----E-ELVKVDKNGLLFS--SSSELADQLLMLFKG 434 (479)
Q Consensus 395 ~PVIas~~~~~----~-e~i~~~~~G~l~~--~~~~la~~l~~l~~~ 434 (479)
+|||....... . +.+..|..+++.. +.++|.+.|..+++.
T Consensus 81 ~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 81 LAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp CEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 78877654332 2 5556677889984 488999999888873
No 99
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=32.74 E-value=1.9e+02 Score=23.75 Aligned_cols=115 Identities=9% Similarity=-0.002 Sum_probs=60.3
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|.++ |++|.++....... ......|++++.-. .. ... .+.+. ...+.
T Consensus 21 ~la~~L~~~-g~~v~vid~~~~~~--~~~~~~g~~~i~gd--~~-------~~~-------~l~~a---------~i~~a 72 (140)
T 3fwz_A 21 LLGEKLLAS-DIPLVVIETSRTRV--DELRERGVRAVLGN--AA-------NEE-------IMQLA---------HLECA 72 (140)
T ss_dssp HHHHHHHHT-TCCEEEEESCHHHH--HHHHHTTCEEEESC--TT-------SHH-------HHHHT---------TGGGC
T ss_pred HHHHHHHHC-CCCEEEEECCHHHH--HHHHHcCCCEEECC--CC-------CHH-------HHHhc---------CcccC
Confidence 346677775 99999998554321 11223566654433 11 011 11110 12578
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhc-CCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~-~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 181 (479)
|++++..|.......++..++... ..++|.-.++..+ . +.+..--+|.++.....
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~~~~~----------------~--------~~l~~~G~d~vi~p~~~ 128 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDE----------------V--------AYITERGANQVVMGERE 128 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESSHHH----------------H--------HHHHHTTCSEEEEHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEEEECCHHH----------------H--------HHHHHCCCCEEECchHH
Confidence 998887765444444555555553 4555554444321 0 11111348888887777
Q ss_pred HHHHHHHh
Q 011690 182 MQHELAQN 189 (479)
Q Consensus 182 ~~~~l~~~ 189 (479)
+...+.+.
T Consensus 129 ~a~~i~~~ 136 (140)
T 3fwz_A 129 IARTMLEL 136 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766554
No 100
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=32.12 E-value=90 Score=31.57 Aligned_cols=78 Identities=15% Similarity=0.110 Sum_probs=54.6
Q ss_pred CCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCC----CC----------------------cchHHHHHHcCCEEE
Q 011690 319 LYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW----LS----------------------AEDYPLLLGSADLGV 372 (479)
Q Consensus 319 ~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~----~~----------------------~~~~~~~l~~adi~v 372 (479)
+.++.+++|.|-|.-....-+.+..+|.++|.+...- .. ..++.+.+..+|+++
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlI 268 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFI 268 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEE
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEE
Confidence 3678999999999877777777777888888887652 11 234889999999999
Q ss_pred EcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 373 CLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 373 ~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
-.+. .+ -|...+++.|+ ..|||.-
T Consensus 269 G~Sa--p~-l~t~emVk~Ma-~~pIIfa 292 (388)
T 1vl6_A 269 GVSR--GN-ILKPEWIKKMS-RKPVIFA 292 (388)
T ss_dssp ECSC--SS-CSCHHHHTTSC-SSCEEEE
T ss_pred EeCC--CC-ccCHHHHHhcC-CCCEEEE
Confidence 7622 22 25556777776 4565543
No 101
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=32.08 E-value=93 Score=28.51 Aligned_cols=54 Identities=9% Similarity=0.116 Sum_probs=27.8
Q ss_pred ceEEEEEecCCCCChhHHHHHHHHHhhCCC--cEE-EEecCCCCCcccccCCCCeEEEEee
Q 011690 5 GRACVVVLGDLGRSPRMQYQALSLARQMSL--EVD-VVAYGGSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~La~~~G~--eV~-Vv~~~~~~~~~~~~~~~gi~i~~~~ 62 (479)
+|+.++++|. ..-.+.....+.+. ++ +|. |+|..+...........||+++.++
T Consensus 2 ~rI~vl~SG~---g~~~~~~l~~l~~~-~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 58 (216)
T 2ywr_A 2 LKIGVLVSGR---GSNLQAIIDAIESG-KVNASIELVISDNPKAYAIERCKKHNVECKVIQ 58 (216)
T ss_dssp EEEEEEECSC---CHHHHHHHHHHHTT-SSCEEEEEEEESCTTCHHHHHHHHHTCCEEECC
T ss_pred CEEEEEEeCC---cHHHHHHHHHHHhC-CCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeC
Confidence 4566565543 23444444555554 67 654 4443222222233445789888776
No 102
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=31.40 E-value=1.9e+02 Score=22.76 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=64.3
Q ss_pred CCCEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHh--C-
Q 011690 320 YPRLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFG--C- 393 (479)
Q Consensus 320 ~p~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama--~- 393 (479)
....+++|+.+.+ ..+.+++..++.|. .|..... .++....+.. .|++++| ... +..+++.+. .
T Consensus 16 ~~~~~ilivdd~~~~~~~l~~~L~~~g~-~v~~~~~---~~~al~~l~~~~~dlvi~~--~~~----g~~~~~~l~~~~~ 85 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIEKGLNVKGF-MADVTES---LEDGEYLMDIRNYDLVMVS--DKN----ALSFVSRIKEKHS 85 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHHHHHHHTTC-EEEEESC---HHHHHHHHHHSCCSEEEEC--STT----HHHHHHHHHHHST
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCc-EEEEeCC---HHHHHHHHHcCCCCEEEEc--Ccc----HHHHHHHHHhcCC
Confidence 3456888888654 34556666666554 3444443 6666666654 5787732 112 234455443 4
Q ss_pred CCcEEEecCcc----chhccccCccEEEe--C-CHHHHHHHHHHHHhc
Q 011690 394 GLPVCAVSYSC----IEELVKVDKNGLLF--S-SSSELADQLLMLFKG 434 (479)
Q Consensus 394 G~PVIas~~~~----~~e~i~~~~~G~l~--~-~~~~la~~l~~l~~~ 434 (479)
.+|||...... ..+.++.|..+++. - +.++|...|..++..
T Consensus 86 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 86 SIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 133 (137)
T ss_dssp TSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC-
T ss_pred CccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHHhh
Confidence 78877664322 34566778889998 3 678999999888763
No 103
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=31.39 E-value=64 Score=29.76 Aligned_cols=56 Identities=16% Similarity=0.131 Sum_probs=27.9
Q ss_pred cceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEee
Q 011690 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~ 62 (479)
++|+.|+++|. ..-++.....+....+++|..|......+........||+++..+
T Consensus 12 ~~ri~vl~SG~---gsnl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 12 PARLVVLASGT---GSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp SEEEEEEESSC---CHHHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHTTCCEEECC
T ss_pred CcEEEEEEeCC---hHHHHHHHHHHhccCCCeEEEEEeCCchHHHHHHHHcCCCEEEeC
Confidence 45677776653 233333222221112357665544443222234456789988876
No 104
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=31.37 E-value=2.7e+02 Score=27.79 Aligned_cols=99 Identities=12% Similarity=0.162 Sum_probs=62.4
Q ss_pred HHHHcCC-CcEEEecCCC-----CcchHHHHHHcCCEEEEcccCCCCC-CCcHHHHHHHhCCC-cEEEecCccchhcccc
Q 011690 340 KIRRLRL-KRVAFRTMWL-----SAEDYPLLLGSADLGVCLHTSSSGL-DLPMKVVDMFGCGL-PVCAVSYSCIEELVKV 411 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~-----~~~~~~~~l~~adi~v~p~~~s~~e-~~p~~llEama~G~-PVIas~~~~~~e~i~~ 411 (479)
.++++.- -.|...|... +.++..++++..-..++. ..+... -+--|+.+|+.+|+ ||+--. +...+++-
T Consensus 198 ~~~~L~k~i~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLaf-ENs~c~dYvTEK~~~al~~g~VPI~~G~-~~~~~~~P- 274 (371)
T 2nzw_A 198 FYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCF-ENTQGYGYVTEKIIDAYFSHTIPIYWGS-PSVAKDFN- 274 (371)
T ss_dssp HHHHHTTTSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEE-CSSCCTTCCCTHHHHHHHTTCEEEEESC-TTGGGTSC-
T ss_pred HHHHHhCcCCEeeCCCccCCCCCccccHHHHHhcCcEEEEE-eccCCCCcccHHHHHHHhCCeEEEEECC-CchhhhCC-
Confidence 4444432 3466666522 236778888888888774 333211 13449999999996 666543 34556653
Q ss_pred CccEEE-e---CCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 011690 412 DKNGLL-F---SSSSELADQLLMLFKGFPDDSDVLKKLR 446 (479)
Q Consensus 412 ~~~G~l-~---~~~~~la~~l~~l~~~~~~~~~~~~~~~ 446 (479)
. ..++ + +++++||+-|..|-+ |++...++-
T Consensus 275 p-~SfI~~~dF~s~~~La~yL~~L~~----n~~~Y~~y~ 308 (371)
T 2nzw_A 275 P-KSFVNVHDFKNFDEAIDYIKYLHT----HKNAYLDML 308 (371)
T ss_dssp G-GGSEEGGGSSSHHHHHHHHHHHHT----CHHHHHHHH
T ss_pred C-CceEEcccCCCHHHHHHHHHHHhc----CHHHHHHHH
Confidence 2 3444 3 679999999999988 576666554
No 105
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=31.13 E-value=1e+02 Score=28.83 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=45.2
Q ss_pred EEEEEe-cCCChHHHHHHHHHc-CCCcEEEecCCCCcchHHHHHH-cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 324 LFIITG-KGPDKESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 324 ~l~IvG-~G~~~~~l~~~~~~~-~l~~V~f~G~~~~~~~~~~~l~-~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
++.|+| .|..-..+.+.+.+. +.+=+-.... .+++.+++. .+|+.|-. +..+..-.-+..+...|+|+|..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~---~~dl~~~~~~~~DvvIDf---T~p~a~~~~~~~a~~~g~~~Vig 75 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA---GDPLSLLTDGNTEVVIDF---THPDVVMGNLEFLIDNGIHAVVG 75 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT---TCCTHHHHHTTCCEEEEC---SCTTTHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc---CCCHHHHhccCCcEEEEc---cChHHHHHHHHHHHHcCCCEEEc
Confidence 678899 587777777766543 3222223332 456666665 78998843 22232332344568899998886
Q ss_pred cCcc
Q 011690 401 SYSC 404 (479)
Q Consensus 401 ~~~~ 404 (479)
..|-
T Consensus 76 TTG~ 79 (245)
T 1p9l_A 76 TTGF 79 (245)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 5544
No 106
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=30.91 E-value=2.9e+02 Score=24.72 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=16.8
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCC
Q 011690 20 RMQYQALSLARQMSLEVDVVAYGG 43 (479)
Q Consensus 20 r~~~~a~~La~~~G~eV~Vv~~~~ 43 (479)
-....|..|+++ |+.|.++-...
T Consensus 19 ~a~~LA~~la~~-g~~VlliD~D~ 41 (260)
T 3q9l_A 19 SSAAIATGLAQK-GKKTVVIDFAI 41 (260)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCC
T ss_pred HHHHHHHHHHhC-CCcEEEEECCC
Confidence 344567778885 99999996554
No 107
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=30.18 E-value=1.5e+02 Score=27.04 Aligned_cols=54 Identities=20% Similarity=0.239 Sum_probs=29.3
Q ss_pred eEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCC-cccccCCCCeEEEEee
Q 011690 6 RACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKP-HAAILEHPSIHIHTMT 62 (479)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~-~~~~~~~~gi~i~~~~ 62 (479)
++.|+++|. | .-++..+..+... .+++|..|......+ ........||+++.++
T Consensus 2 riaVl~SG~-G--s~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 57 (209)
T 1meo_A 2 RVAVLISGT-G--SNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVIN 57 (209)
T ss_dssp EEEEEESSS-C--TTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred eEEEEEECC-c--hHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEEC
Confidence 577777654 2 3344433333332 368876665444332 2233456789988776
No 108
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.90 E-value=2.1e+02 Score=27.45 Aligned_cols=56 Identities=5% Similarity=0.049 Sum_probs=30.9
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCCeEEEEee
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~ 62 (479)
+++|+.|++++. | .-++......... ...+|.+|..+.... ....+..||+++.+|
T Consensus 94 ~~~ri~vl~Sg~-g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 94 ARPKVLIMVSKL-E--HCLADLLFRWKMGELKMDIVGIVSNHPDF-APLAAQHGLPFRHFP 150 (292)
T ss_dssp SCCEEEEEECSC-C--HHHHHHHHHHHHTSSCCEEEEEEESSSTT-HHHHHHTTCCEEECC
T ss_pred CCCEEEEEEcCC-C--cCHHHHHHHHHcCCCCcEEEEEEeCcHHH-HHHHHHcCCCEEEeC
Confidence 456788777664 2 2333222222221 346766665554332 244556799999988
No 109
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=29.89 E-value=1.9e+02 Score=27.77 Aligned_cols=56 Identities=9% Similarity=0.067 Sum_probs=30.0
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCCeEEEEee
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~ 62 (479)
+++|+.|++++. | .-++......... ...+|..|..+.... ....+..||+++.+|
T Consensus 89 ~~~ri~vl~Sg~-g--~~l~~ll~~~~~g~l~~~i~~Visn~~~~-~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 89 HRPKVVIMVSKA-D--HCLNDLLYRQRIGQLGMDVVAVVSNHPDL-EPLAHWHKIPYYHFA 145 (286)
T ss_dssp CCCEEEEEESSC-C--HHHHHHHHHHHTTSSCCEEEEEEESSSTT-HHHHHHTTCCEEECC
T ss_pred CCcEEEEEEeCC-C--CCHHHHHHHHHCCCCCcEEEEEEeCcHHH-HHHHHHcCCCEEEeC
Confidence 456777777664 1 2222222222221 236766665544322 244556799999988
No 110
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=29.64 E-value=47 Score=30.60 Aligned_cols=40 Identities=18% Similarity=0.111 Sum_probs=25.9
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~ 42 (479)
|.++|++.+-+.|.+|- -.....+..|.+. |++|+|+...
T Consensus 1 m~~~k~IllgvTGaiaa-~k~~~ll~~L~~~-g~eV~vv~T~ 40 (209)
T 3zqu_A 1 MSGPERITLAMTGASGA-QYGLRLLDCLVQE-EREVHFLISK 40 (209)
T ss_dssp CCSCSEEEEEECSSSCH-HHHHHHHHHHHHT-TCEEEEEECH
T ss_pred CCCCCEEEEEEECHHHH-HHHHHHHHHHHHC-CCEEEEEECc
Confidence 77778877777665432 2233445666664 9999999643
No 111
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=29.63 E-value=2e+02 Score=22.45 Aligned_cols=107 Identities=9% Similarity=0.115 Sum_probs=66.3
Q ss_pred CEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHH---cCCEEEEcccCCCCCCCcHHHHHHHhC----
Q 011690 322 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG---SADLGVCLHTSSSGLDLPMKVVDMFGC---- 393 (479)
Q Consensus 322 ~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~---~adi~v~p~~~s~~e~~p~~llEama~---- 393 (479)
..+++|+.+.+ ..+.+++..++.|...|..... ..+....+. ..|++++=. .....-|..+++.+-.
T Consensus 5 ~~~iLivdd~~~~~~~l~~~L~~~g~~~v~~~~~---~~~a~~~~~~~~~~dlvi~D~--~~p~~~g~~~~~~lr~~~~~ 79 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEH---GVEAWEKLDANADTKVLITDW--NMPEMNGLDLVKKVRSDSRF 79 (129)
T ss_dssp -CCEEEECSCHHHHHHHHHHHHHTTCCCEEEESS---HHHHHHHHHHCTTCCEEEECS--CCSSSCHHHHHHHHHTSTTC
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCCcEEEEeCC---HHHHHHHHHhCCCCCEEEEeC--CCCCCCHHHHHHHHHhcCCC
Confidence 35677888654 3456667777777655554443 555544443 357777621 1122235577777653
Q ss_pred -CCcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHh
Q 011690 394 -GLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFK 433 (479)
Q Consensus 394 -G~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~ 433 (479)
.+|||...... ..+.++.|..+++.+ ++++|.+.+..++.
T Consensus 80 ~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 80 KEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp TTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhc
Confidence 57877764322 235667788899995 48899999998886
No 112
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=29.59 E-value=1.3e+02 Score=27.69 Aligned_cols=56 Identities=11% Similarity=0.099 Sum_probs=28.1
Q ss_pred cceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCC-CCcccccCCCCeEEEEee
Q 011690 4 RGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGS-KPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~-~~~~~~~~~~gi~i~~~~ 62 (479)
|+|+.|+++|. ..-++......... ...+|.+|..... .+........||+++.++
T Consensus 2 m~riavl~Sg~---Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~ 59 (211)
T 3p9x_A 2 MKRVAIFASGS---GTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALD 59 (211)
T ss_dssp -CEEEEECCTT---CHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECC
T ss_pred CCEEEEEEeCC---chHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeC
Confidence 35677777653 23333333333222 2246665554432 222234556799988876
No 113
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=29.40 E-value=47 Score=31.08 Aligned_cols=26 Identities=15% Similarity=0.365 Sum_probs=21.1
Q ss_pred CCCEEEEEEec----CCChHHHHHHHHHcC
Q 011690 320 YPRLLFIITGK----GPDKESYEEKIRRLR 345 (479)
Q Consensus 320 ~p~~~l~IvG~----G~~~~~l~~~~~~~~ 345 (479)
+.+..|.|.|. +..++++++.+++.|
T Consensus 3 F~g~~F~ls~~~~~~~~~k~~L~~~I~~~G 32 (241)
T 2vxb_A 3 FDDCVFAFSGPVHEDAYDRSALETVVQDHG 32 (241)
T ss_dssp TTTEEEEECCCSSTTSSCHHHHHHHHHHTT
T ss_pred CCCcEEEEecCCCCchhhHHHHHHHHHHCC
Confidence 56788988886 257789999999987
No 114
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=28.07 E-value=63 Score=30.88 Aligned_cols=57 Identities=23% Similarity=0.267 Sum_probs=34.6
Q ss_pred cceEEEEEecCCC-CChhHHHHHHHHHhhCCCcEEEEecCCCCCc--ccccCCCCeEEEEee
Q 011690 4 RGRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGSKPH--AAILEHPSIHIHTMT 62 (479)
Q Consensus 4 ~~~~~i~~~~~~g-~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~--~~~~~~~gi~i~~~~ 62 (479)
++...|++.+|=| .++++...+..|.+ +|+|.|+++...+.. ..+....-+++.++.
T Consensus 9 ~~~m~ILlTNDDGi~apGi~aL~~~l~~--~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~ 68 (261)
T 3ty2_A 9 TPKLRLLLSNDDGVYAKGLAILAKTLAD--LGEVDVVAPDRNRSGASNSLTLNAPLHIKNLE 68 (261)
T ss_dssp --CCEEEEECSSCTTCHHHHHHHHHHTT--TSEEEEEEESSCCTTCTTCCCCSSCEEEEECT
T ss_pred CCCCeEEEEcCCCCCCHHHHHHHHHHHh--cCCEEEEecCCCCcCcccceecCCCeEEEEec
Confidence 3445567777655 48898888777755 799999998754321 122223345555544
No 115
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=28.03 E-value=2.9e+02 Score=26.73 Aligned_cols=85 Identities=8% Similarity=0.062 Sum_probs=44.3
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHH
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL 81 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l 81 (479)
.++|+.|++++. | .-++......... .+.+|..|..+.... ....+..||+++.+| ... ..+ ...-..+
T Consensus 104 ~~~ri~vl~Sg~-g--~nl~~ll~~~~~g~l~~~I~~Visn~~~~-~~~A~~~gIp~~~~~--~~~---~~r-~~~~~~~ 173 (302)
T 3o1l_A 104 QKKRVVLMASRE-S--HCLADLLHRWHSDELDCDIACVISNHQDL-RSMVEWHDIPYYHVP--VDP---KDK-EPAFAEV 173 (302)
T ss_dssp SCCEEEEEECSC-C--HHHHHHHHHHHTTCSCSEEEEEEESSSTT-HHHHHTTTCCEEECC--CCS---SCC-HHHHHHH
T ss_pred CCcEEEEEEeCC-c--hhHHHHHHHHHCCCCCcEEEEEEECcHHH-HHHHHHcCCCEEEcC--CCc---CCH-HHHHHHH
Confidence 466788877664 2 2222222222221 346776665544322 244567899999987 211 111 1111233
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEeC
Q 011690 82 LKPLIQFFMLLWFLCVKIASPDVFLVQN 109 (479)
Q Consensus 82 ~~~l~~~~~~~~~l~~~~~~~DvI~~~~ 109 (479)
...+.+ .+||+|.+-.
T Consensus 174 ~~~l~~------------~~~DliVlag 189 (302)
T 3o1l_A 174 SRLVGH------------HQADVVVLAR 189 (302)
T ss_dssp HHHHHH------------TTCSEEEESS
T ss_pred HHHHHH------------hCCCEEEHhH
Confidence 344444 8999988776
No 116
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=27.90 E-value=2.4e+02 Score=26.26 Aligned_cols=24 Identities=17% Similarity=0.070 Sum_probs=17.7
Q ss_pred ChhHHHHHHHHHhhCCCcEEEEecC
Q 011690 18 SPRMQYQALSLARQMSLEVDVVAYG 42 (479)
Q Consensus 18 ~~r~~~~a~~La~~~G~eV~Vv~~~ 42 (479)
+--..+.|..||+. |..|.+|-..
T Consensus 97 Tt~a~nLA~~lA~~-G~rVLLID~D 120 (271)
T 3bfv_A 97 STIAANLAVAYAQA-GYKTLIVDGD 120 (271)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred HHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 33445678888885 9999999654
No 117
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=27.89 E-value=2.3e+02 Score=22.54 Aligned_cols=108 Identities=9% Similarity=0.012 Sum_probs=67.7
Q ss_pred CCEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhC----
Q 011690 321 PRLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC---- 393 (479)
Q Consensus 321 p~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~---- 393 (479)
...+++|+.+.+ ..+.+.+..++.|. .|..... .++....+.. .|++++=. .....-+..+++.+..
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g~-~v~~~~~---~~~a~~~l~~~~~dlii~d~--~l~~~~g~~~~~~l~~~~~~ 80 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEGF-DIIQCGN---AIEAVPVAVKTHPHLIITEA--NMPKISGMDLFNSLKKNPQT 80 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHTE-EEEEESS---HHHHHHHHHHHCCSEEEEES--CCSSSCHHHHHHHHHTSTTT
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcCC-eEEEeCC---HHHHHHHHHcCCCCEEEEcC--CCCCCCHHHHHHHHHcCccc
Confidence 357888888764 45667777766654 3444343 6666666554 68877631 1112234577777654
Q ss_pred -CCcEEEecC-cc---chhccccCccEEEeC--CHHHHHHHHHHHHhc
Q 011690 394 -GLPVCAVSY-SC---IEELVKVDKNGLLFS--SSSELADQLLMLFKG 434 (479)
Q Consensus 394 -G~PVIas~~-~~---~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~ 434 (479)
.+|||.... .. ..+.++.|..+++.. +.++|...|..++..
T Consensus 81 ~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 81 ASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKL 128 (147)
T ss_dssp TTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 678776543 22 234566788899984 478999999888773
No 118
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=27.74 E-value=1.3e+02 Score=27.51 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=28.0
Q ss_pred eEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCC-CCCcccccCCCCeEEEEee
Q 011690 6 RACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGG-SKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~-~~~~~~~~~~~gi~i~~~~ 62 (479)
|+.|+.+|. ..-++.....+... .+++|..|.... ...........||+++.++
T Consensus 2 ri~vl~Sg~---gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~ 57 (212)
T 1jkx_A 2 NIVVLISGN---GSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLI 57 (212)
T ss_dssp EEEEEESSC---CHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECC
T ss_pred EEEEEEECC---cHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeC
Confidence 466666553 23344434444332 357765554343 2222234456799998876
No 119
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=27.67 E-value=2.4e+02 Score=22.68 Aligned_cols=108 Identities=13% Similarity=0.155 Sum_probs=65.6
Q ss_pred CEEEEEEecCCC-hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHh---CC
Q 011690 322 RLLFIITGKGPD-KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFG---CG 394 (479)
Q Consensus 322 ~~~l~IvG~G~~-~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama---~G 394 (479)
..+++|+.+.+. .+.+.+..++.+- ..|..... .++....+.. .|++++=. .....-+..+++.+. ..
T Consensus 20 m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~al~~l~~~~~dlii~D~--~l~~~~g~~~~~~l~~~~~~ 94 (150)
T 4e7p_A 20 HMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKN---GQEAIQLLEKESVDIAILDV--EMPVKTGLEVLEWIRSEKLE 94 (150)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESS---HHHHHHHHTTSCCSEEEECS--SCSSSCHHHHHHHHHHTTCS
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECC---HHHHHHHhhccCCCEEEEeC--CCCCCcHHHHHHHHHHhCCC
Confidence 478889887542 3445555554432 23444333 6677766654 47777621 112223445666554 36
Q ss_pred CcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHhc
Q 011690 395 LPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFKG 434 (479)
Q Consensus 395 ~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~ 434 (479)
+|||...... ..+.++.|..+++.. +.++|.+.|..++..
T Consensus 95 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 95 TKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG 140 (150)
T ss_dssp CEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTT
T ss_pred CeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcC
Confidence 7777654332 345677788899994 588999999999885
No 120
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=27.64 E-value=3.3e+02 Score=26.80 Aligned_cols=38 Identities=13% Similarity=0.244 Sum_probs=21.3
Q ss_pred CCCc-ceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCC
Q 011690 1 MGRR-GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 1 m~~~-~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~ 44 (479)
|.++ |+++|+..+. ... .+..-|+++|++|.+++....
T Consensus 1 M~~~~k~l~Il~~~~-----~~~-~i~~aa~~lG~~vv~v~~~~~ 39 (425)
T 3vot_A 1 MTKRNKNLAIICQNK-----HLP-FIFEEAERLGLKVTFFYNSAE 39 (425)
T ss_dssp -CCCCCEEEEECCCT-----TCC-HHHHHHHHTTCEEEEEEETTS
T ss_pred CCCCCcEEEEECCCh-----hHH-HHHHHHHHCCCEEEEEECCCc
Confidence 5555 5666665332 112 233444557999999976554
No 121
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=27.55 E-value=41 Score=29.39 Aligned_cols=41 Identities=29% Similarity=0.337 Sum_probs=30.1
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhhCCC--cEEEEec
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSL--EVDVVAY 41 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~--eV~Vv~~ 41 (479)
|.++++++.||.|++.||+-.+.....++.+.|. .+.|.+.
T Consensus 1 ~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SA 43 (161)
T 2cwd_A 1 MDRPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSA 43 (161)
T ss_dssp -CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Confidence 6667788999999999999888877777764353 4666553
No 122
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=27.50 E-value=2.5e+02 Score=22.87 Aligned_cols=107 Identities=6% Similarity=0.052 Sum_probs=64.1
Q ss_pred CEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc----CCEEEEcccCCCCCCCcHHHHHHH---hC
Q 011690 322 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS----ADLGVCLHTSSSGLDLPMKVVDMF---GC 393 (479)
Q Consensus 322 ~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~----adi~v~p~~~s~~e~~p~~llEam---a~ 393 (479)
..+++|+.+.+ ..+.+++..++.+..-+.... +.++....+.. .|++++=. .....-+..+++.+ ..
T Consensus 36 ~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~---~~~~al~~l~~~~~~~dliilD~--~l~~~~g~~~~~~lr~~~~ 110 (157)
T 3hzh_A 36 PFNVLIVDDSVFTVKQLTQIFTSEGFNIIDTAA---DGEEAVIKYKNHYPNIDIVTLXI--TMPKMDGITCLSNIMEFDK 110 (157)
T ss_dssp ECEEEEECSCHHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHHGGGCCEEEECS--SCSSSCHHHHHHHHHHHCT
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCCCCCEEEEec--cCCCccHHHHHHHHHhhCC
Confidence 36788888654 345566666666543231323 36666666654 48888631 11112344555554 34
Q ss_pred CCcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHh
Q 011690 394 GLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFK 433 (479)
Q Consensus 394 G~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~ 433 (479)
.+|||...... ..+.++.|..+++.. +.++|.+.|..++.
T Consensus 111 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 111 NARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp TCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTTC
T ss_pred CCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 67887764332 345667788899994 47889998887764
No 123
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.10 E-value=1.6e+02 Score=27.09 Aligned_cols=55 Identities=13% Similarity=0.202 Sum_probs=28.2
Q ss_pred ceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCc-ccccCCCCeEEEEee
Q 011690 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIHIHTMT 62 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~-~~~~~~~gi~i~~~~ 62 (479)
+|+.|+++|. ..-++..........+++|..|........ .......||+++.++
T Consensus 6 ~riavl~SG~---Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~ 61 (215)
T 3tqr_A 6 LPIVVLISGN---GTNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIP 61 (215)
T ss_dssp EEEEEEESSC---CHHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECC
T ss_pred cEEEEEEeCC---cHHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 4666666553 234443333332212467665554432221 233456799999887
No 124
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=26.90 E-value=1.5e+02 Score=28.61 Aligned_cols=96 Identities=14% Similarity=0.112 Sum_probs=55.4
Q ss_pred CcEEEecCCCCcc--hHHHHHHcCCEEEEcccCCCCCCCc-HHHHHHHhCCCcEEEecCccchhc--cccCccEEEeCCH
Q 011690 347 KRVAFRTMWLSAE--DYPLLLGSADLGVCLHTSSSGLDLP-MKVVDMFGCGLPVCAVSYSCIEEL--VKVDKNGLLFSSS 421 (479)
Q Consensus 347 ~~V~f~G~~~~~~--~~~~~l~~adi~v~p~~~s~~e~~p-~~llEama~G~PVIas~~~~~~e~--i~~~~~G~l~~~~ 421 (479)
++|.|.|..+|.+ .....+..||++|+. .+|... .| ..+.++...|.|+|.-+....... .....+-.+..+.
T Consensus 175 P~IV~FGE~lp~~~~~~~~~~~~aDlllvi-GTSl~V-~Paa~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~~~g~~ 252 (285)
T 3glr_A 175 PDIVFFGEPLPQRFLLHVVDFPMADLLLIL-GTSLEV-EPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVAQLGDV 252 (285)
T ss_dssp EEECCTTSBCCGGGGGHHHHHHHCSEEEEE-SCCCCE-ETTGGGGGSSCTTSCEEEEESSCCTHHHHSCCTTEEEEESCH
T ss_pred CcEEEeCCcCCHHHHHHHHHHhcCCEEEEe-CCCCcc-ccHHHHHHHHhCCCcEEEECCCCcCccccCCCCccEEEcCCH
Confidence 5788888766653 334567889999985 333111 11 123455667889888775444322 1122233444787
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 011690 422 SELADQLLMLFKGFPDDSDVLKKLRNG 448 (479)
Q Consensus 422 ~~la~~l~~l~~~~~~~~~~~~~~~~~ 448 (479)
++....|.+.+- -.++++.+-+.
T Consensus 253 ~~~~~~L~~~lg----w~~el~~~~~~ 275 (285)
T 3glr_A 253 VHGVESLVELLG----WTEEMRDLVQR 275 (285)
T ss_dssp HHHHHHHHHHHT----CHHHHHHHHHH
T ss_pred HHHHHHHHHHhC----CHHHHHHHHHh
Confidence 777777777665 34555555443
No 125
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=26.63 E-value=1.5e+02 Score=28.07 Aligned_cols=25 Identities=8% Similarity=-0.044 Sum_probs=17.9
Q ss_pred ChhHHHHHHHHHhhCCCcEEEEecCC
Q 011690 18 SPRMQYQALSLARQMSLEVDVVAYGG 43 (479)
Q Consensus 18 ~~r~~~~a~~La~~~G~eV~Vv~~~~ 43 (479)
+--..+.|..||+. |..|.+|-...
T Consensus 107 Ttva~nLA~~lA~~-G~rVLLID~D~ 131 (286)
T 3la6_A 107 TFVCANLAAVISQT-NKRVLLIDCDM 131 (286)
T ss_dssp HHHHHHHHHHHHTT-TCCEEEEECCT
T ss_pred HHHHHHHHHHHHhC-CCCEEEEeccC
Confidence 33445667888885 99999996543
No 126
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=26.51 E-value=3.6e+02 Score=24.32 Aligned_cols=26 Identities=15% Similarity=0.012 Sum_probs=18.3
Q ss_pred ChhHHH-HHHHHHhhCCCcEEEEecCCC
Q 011690 18 SPRMQY-QALSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 18 ~~r~~~-~a~~La~~~G~eV~Vv~~~~~ 44 (479)
++++.. .+..|+++ |++|.++.....
T Consensus 16 s~gIG~aia~~l~~~-G~~V~~~~r~~~ 42 (257)
T 3tpc_A 16 SSGLGAAVTRMLAQE-GATVLGLDLKPP 42 (257)
T ss_dssp TSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred CCHHHHHHHHHHHHC-CCEEEEEeCChH
Confidence 345544 47888886 999988875543
No 127
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=26.43 E-value=1.8e+02 Score=27.76 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=46.4
Q ss_pred CcEEEecCCCCcchHH----------------HHHHcCCEEEEcccCCCCCCCc-HHHHHHHhCCCcEEEecCccchhcc
Q 011690 347 KRVAFRTMWLSAEDYP----------------LLLGSADLGVCLHTSSSGLDLP-MKVVDMFGCGLPVCAVSYSCIEELV 409 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~----------------~~l~~adi~v~p~~~s~~e~~p-~~llEama~G~PVIas~~~~~~e~i 409 (479)
++|.|.|.++|.+... +....||++|+. .+|... .| ..+.+....|.|+|.-+.......-
T Consensus 175 P~vv~FGE~lp~~~~~~~~~~~~~l~~~~~a~~~~~~~Dlllvi-GTSl~V-~Pa~~l~~~~~~~~~~v~IN~~~~~~~~ 252 (289)
T 1q1a_A 175 PAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVV-GTSLAV-YPFASLPEEIPRKVKRVLCNLETVGDFK 252 (289)
T ss_dssp EEECCBTSBCCHHHHHHHHHHHHHHHHHHHC----CCCCEEEEE-SCCCCE-ETTTHHHHHSCTTSEEEEESSSCCTHHH
T ss_pred CCEEEcCCCCCHHHHHHHHHhhhhhhhhhhHHHHhccCCEEEEE-ccCCCh-hhHHHHHHHHhcCCCEEEEECCCcccCC
Confidence 5777878767665422 236789999985 333111 22 2345555569999988866543210
Q ss_pred -ccCccEEEe-CCHHHHHHHHHHHHh
Q 011690 410 -KVDKNGLLF-SSSSELADQLLMLFK 433 (479)
Q Consensus 410 -~~~~~G~l~-~~~~~la~~l~~l~~ 433 (479)
......+.+ .+.++....|.+.+.
T Consensus 253 ~~~~~~d~~i~~~~~~~l~~l~~~l~ 278 (289)
T 1q1a_A 253 ANKRPTDLIVHQYSDEFAEQLVEELG 278 (289)
T ss_dssp HSCCTTCEEECCCHHHHHHHHHHHHT
T ss_pred CCCcceeEEEeCCHHHHHHHHHHHcC
Confidence 111233444 677766666655444
No 128
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=26.39 E-value=1.2e+02 Score=31.05 Aligned_cols=81 Identities=10% Similarity=0.100 Sum_probs=57.6
Q ss_pred CCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC------------cchHHHHHHcCCEEEEcccCCCCCCCcHHH
Q 011690 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS------------AEDYPLLLGSADLGVCLHTSSSGLDLPMKV 387 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~------------~~~~~~~l~~adi~v~p~~~s~~e~~p~~l 387 (479)
..+-++.|+|-|+.-..+-+.++..|. +|..... -+ ..++.+.+..||+++.. +....-+....
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~-dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a--tgt~~lI~~e~ 293 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEI-DPICALQACMDGFRLVKLNEVIRQVDIVITC--TGNKNVVTREH 293 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS-CHHHHHHHHHTTCEECCHHHHTTTCSEEEEC--SSCSCSBCHHH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeC-ChhhhHHHHHcCCEeccHHHHHhcCCEEEEC--CCCcccCCHHH
Confidence 456799999999888888888887775 5766653 11 23577889999999984 22122255688
Q ss_pred HHHHhCCCcEEEecCcc
Q 011690 388 VDMFGCGLPVCAVSYSC 404 (479)
Q Consensus 388 lEama~G~PVIas~~~~ 404 (479)
++.|.-|.-+|.+..+.
T Consensus 294 l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 294 LDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp HHHSCTTEEEEECSSTT
T ss_pred HHhcCCCcEEEEecCCC
Confidence 99999997777776554
No 129
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=25.97 E-value=1.4e+02 Score=24.02 Aligned_cols=110 Identities=8% Similarity=0.014 Sum_probs=64.7
Q ss_pred CCCEEEEEEecCC-ChHHHHHHHHHcC-CCcEEEecCCCCcchHHHHH---HcCCEEEEcccCCCCCCCcHHHHHHHh--
Q 011690 320 YPRLLFIITGKGP-DKESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLL---GSADLGVCLHTSSSGLDLPMKVVDMFG-- 392 (479)
Q Consensus 320 ~p~~~l~IvG~G~-~~~~l~~~~~~~~-l~~V~f~G~~~~~~~~~~~l---~~adi~v~p~~~s~~e~~p~~llEama-- 392 (479)
.+..+++|+.+.+ ..+.+++..++.+ ..-+.+... .+.+..+. ...|++++=. .....-+..+++.+.
T Consensus 18 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~---~~~~~~~~~~~~~~dlvi~D~--~l~~~~g~~~~~~l~~~ 92 (146)
T 4dad_A 18 QGMINILVASEDASRLAHLARLVGDAGRYRVTRTVGR---AAQIVQRTDGLDAFDILMIDG--AALDTAELAAIEKLSRL 92 (146)
T ss_dssp GGGCEEEEECSCHHHHHHHHHHHHHHCSCEEEEECCC---HHHHTTCHHHHTTCSEEEEEC--TTCCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEeCCH---HHHHHHHHhcCCCCCEEEEeC--CCCCccHHHHHHHHHHh
Confidence 3457888888764 3456677777766 332322222 33444444 3568888731 111112335555443
Q ss_pred -CCCcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHhc
Q 011690 393 -CGLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFKG 434 (479)
Q Consensus 393 -~G~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~ 434 (479)
..+|||...... ..+.++.|..+++.. +.++|...|..++..
T Consensus 93 ~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 93 HPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp CTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHHT
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHhh
Confidence 367877654322 335567788899984 488999999988874
No 130
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=25.59 E-value=1.5e+02 Score=29.09 Aligned_cols=83 Identities=10% Similarity=0.011 Sum_probs=54.4
Q ss_pred CCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC-------cchHHHHHHcCCEEEEcc--cCCCCCCCcHHHHHHH
Q 011690 321 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS-------AEDYPLLLGSADLGVCLH--TSSSGLDLPMKVVDMF 391 (479)
Q Consensus 321 p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~-------~~~~~~~l~~adi~v~p~--~~s~~e~~p~~llEam 391 (479)
.+-++-|+|-|.....+-+.++..|. +|....+... ..++.++++.||++++-. +.....-+....++.|
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~m 248 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQAL 248 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHT
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcC
Confidence 35689999999877777777776664 5666654111 247889999999988732 2222222456788889
Q ss_pred hCCCcEEEecCcc
Q 011690 392 GCGLPVCAVSYSC 404 (479)
Q Consensus 392 a~G~PVIas~~~~ 404 (479)
.-|.-+|-+..|+
T Consensus 249 k~gailIN~aRG~ 261 (340)
T 4dgs_A 249 GPEGIVVNVARGN 261 (340)
T ss_dssp TTTCEEEECSCC-
T ss_pred CCCCEEEECCCCc
Confidence 8888888776655
No 131
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=25.11 E-value=2.2e+02 Score=27.94 Aligned_cols=82 Identities=13% Similarity=0.030 Sum_probs=57.3
Q ss_pred CEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC--------cchHHHHHHcCCEEEEc--ccCCCCCCCcHHHHHHH
Q 011690 322 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS--------AEDYPLLLGSADLGVCL--HTSSSGLDLPMKVVDMF 391 (479)
Q Consensus 322 ~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~--------~~~~~~~l~~adi~v~p--~~~s~~e~~p~~llEam 391 (479)
+-++-|+|-|.....+-+.++..|. +|....+... ..++.++++.||++++- .+.+...-+....+..|
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~m 226 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGA-KVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEM 226 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHS
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCC-EEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhC
Confidence 4589999999888888888887774 4666554111 22578999999998763 22222222566888899
Q ss_pred hCCCcEEEecCcc
Q 011690 392 GCGLPVCAVSYSC 404 (479)
Q Consensus 392 a~G~PVIas~~~~ 404 (479)
--|.-+|-+..|+
T Consensus 227 k~gailIN~aRg~ 239 (343)
T 2yq5_A 227 KKSAYLINCARGE 239 (343)
T ss_dssp CTTCEEEECSCGG
T ss_pred CCCcEEEECCCCh
Confidence 8888888887666
No 132
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.93 E-value=2.4e+02 Score=21.84 Aligned_cols=106 Identities=14% Similarity=0.035 Sum_probs=65.7
Q ss_pred EEEEEEecCC-ChHHHHHHHHHcCCC-cEEEecCCCCcchHHHHHHc---------CCEEEEcccCCCCCCCcHHHHHHH
Q 011690 323 LLFIITGKGP-DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGS---------ADLGVCLHTSSSGLDLPMKVVDMF 391 (479)
Q Consensus 323 ~~l~IvG~G~-~~~~l~~~~~~~~l~-~V~f~G~~~~~~~~~~~l~~---------adi~v~p~~~s~~e~~p~~llEam 391 (479)
.+++|+.+.+ ..+.+++..++.+.. .|..... .++....+.. .|++++=. .....-+..+++.+
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~a~~~l~~~~~~~~~~~~dlvi~d~--~~~~~~g~~~~~~l 77 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRD---GMEAMAYLRQEGEYANASRPDLILLXL--NLPKKDGREVLAEI 77 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECS---HHHHHHHHTTCGGGGSCCCCSEEEECS--SCSSSCHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECC---HHHHHHHHHcccccccCCCCcEEEEec--CCCcccHHHHHHHH
Confidence 4667777654 345566666666652 5655554 7777777764 68887631 11112344666665
Q ss_pred h-----CCCcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHh
Q 011690 392 G-----CGLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFK 433 (479)
Q Consensus 392 a-----~G~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~ 433 (479)
. ..+|||...... ..+.++.|..+++.. +.++|...+..++.
T Consensus 78 ~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 78 KSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp HHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHHHH
Confidence 4 467877654322 345566788899984 47889888888776
No 133
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=24.41 E-value=3e+02 Score=26.29 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=47.4
Q ss_pred CCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhCCCcE
Q 011690 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 397 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~G~PV 397 (479)
.|+++++-+-+ +..+..++.++++++.++ ..++.++++. .|++++....... ...+.+|+..|++|
T Consensus 46 ~~~~~lvav~d-~~~~~a~~~a~~~g~~~~--------y~d~~ell~~~~iDaV~I~tP~~~H---~~~~~~al~aGkhV 113 (350)
T 4had_A 46 AENCVVTAIAS-RDLTRAREMADRFSVPHA--------FGSYEEMLASDVIDAVYIPLPTSQH---IEWSIKAADAGKHV 113 (350)
T ss_dssp CSSEEEEEEEC-SSHHHHHHHHHHHTCSEE--------ESSHHHHHHCSSCSEEEECSCGGGH---HHHHHHHHHTTCEE
T ss_pred CCCeEEEEEEC-CCHHHHHHHHHHcCCCee--------eCCHHHHhcCCCCCEEEEeCCCchh---HHHHHHHHhcCCEE
Confidence 67788775553 467778888888876432 3567778875 5787775222211 23678999999999
Q ss_pred EEec
Q 011690 398 CAVS 401 (479)
Q Consensus 398 Ias~ 401 (479)
++=.
T Consensus 114 l~EK 117 (350)
T 4had_A 114 VCEK 117 (350)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9763
No 134
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=23.88 E-value=2.3e+02 Score=25.78 Aligned_cols=19 Identities=5% Similarity=0.081 Sum_probs=13.6
Q ss_pred HHHHHhhCCCcEEEEecCCC
Q 011690 25 ALSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 25 a~~La~~~G~eV~Vv~~~~~ 44 (479)
...++++ |++|+|++...+
T Consensus 22 ia~~~~~-G~~v~vv~lT~G 40 (227)
T 1uan_A 22 LARAKAE-GLSTGILDLTRG 40 (227)
T ss_dssp HHHHHHT-TCCEEEEEEECC
T ss_pred HHHHHhC-CCcEEEEEEcCC
Confidence 4556675 999999986543
No 135
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=23.81 E-value=88 Score=27.97 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=22.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD 133 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~ 133 (479)
.+.|++++..+.......+...++...+.+.++.
T Consensus 64 ~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 64 SKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred ccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 6899998887665555555656665556555553
No 136
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.74 E-value=1.3e+02 Score=26.74 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=20.9
Q ss_pred CCCcceEEEEEecCCCCChhHHH-HHHHHHhhCCCcEEEEecC
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYG 42 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~-~a~~La~~~G~eV~Vv~~~ 42 (479)
|..+++.. ++. |.++++.. .+..|+++ |++|.++...
T Consensus 1 M~~~~k~v-lVt---GasggiG~~~a~~l~~~-G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAV-LIT---GASRGIGEATARLLHAK-GYRVGLMARD 38 (234)
T ss_dssp ---CCCEE-EES---STTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CCCCCCEE-EEE---CCCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 55554433 332 34455554 46778886 9999888753
No 137
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=23.70 E-value=2.6e+02 Score=21.83 Aligned_cols=108 Identities=9% Similarity=0.019 Sum_probs=67.4
Q ss_pred CEEEEEEecCC-ChHHHHHHHHH-cCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhC----
Q 011690 322 RLLFIITGKGP-DKESYEEKIRR-LRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC---- 393 (479)
Q Consensus 322 ~~~l~IvG~G~-~~~~l~~~~~~-~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~---- 393 (479)
..+++|+.+.+ ..+.+.+..++ .+...|..... .++....+.. .|++++=. .....-+..+++.+..
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~a~~~l~~~~~dlii~d~--~l~~~~g~~~~~~l~~~~~~ 82 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYN---PFDAGDLLHTVKPDVVMLDL--MMVGMDGFSICHRIKSTPAT 82 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECS---HHHHHHHHHHTCCSEEEEET--TCTTSCHHHHHHHHHTSTTT
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEECC---HHHHHHHHHhcCCCEEEEec--ccCCCcHHHHHHHHHhCccc
Confidence 46788888654 34556666666 56553555554 6666666654 57777631 1112234566776654
Q ss_pred -CCcEEEec-Ccc---chhccccCccEEEeC--CHHHHHHHHHHHHhc
Q 011690 394 -GLPVCAVS-YSC---IEELVKVDKNGLLFS--SSSELADQLLMLFKG 434 (479)
Q Consensus 394 -G~PVIas~-~~~---~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~ 434 (479)
.+|||... ... ..+.++.|..+++.. +.++|.+.+..++..
T Consensus 83 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 130 (143)
T 3cnb_A 83 ANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQ 130 (143)
T ss_dssp TTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHT
T ss_pred cCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 57877653 322 245666788899984 588999999988874
No 138
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=23.49 E-value=2.2e+02 Score=27.06 Aligned_cols=27 Identities=15% Similarity=0.043 Sum_probs=19.1
Q ss_pred CCChhHHHHHHHHHhhCCCcEEEEecCC
Q 011690 16 GRSPRMQYQALSLARQMSLEVDVVAYGG 43 (479)
Q Consensus 16 g~~~r~~~~a~~La~~~G~eV~Vv~~~~ 43 (479)
|-+--..+.|..||+. |..|.+|-...
T Consensus 117 GKTtva~nLA~~lA~~-G~rVLLID~D~ 143 (299)
T 3cio_A 117 GKTFVSSTLAAVIAQS-DQKVLFIDADL 143 (299)
T ss_dssp CHHHHHHHHHHHHHHT-TCCEEEEECCT
T ss_pred ChHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 3344455678888885 99999997553
No 139
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=23.46 E-value=2.9e+02 Score=22.16 Aligned_cols=106 Identities=13% Similarity=0.062 Sum_probs=67.0
Q ss_pred EEEEEEecCC-ChHHHHHHHHHcCCC-cEEEecCCCCcchHHHHHH-----------cCCEEEEcccCCCCCCCcHHHHH
Q 011690 323 LLFIITGKGP-DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLG-----------SADLGVCLHTSSSGLDLPMKVVD 389 (479)
Q Consensus 323 ~~l~IvG~G~-~~~~l~~~~~~~~l~-~V~f~G~~~~~~~~~~~l~-----------~adi~v~p~~~s~~e~~p~~llE 389 (479)
.+++|+.+.+ ..+.+++..++.+.. .|..... .++....+. ..|++++=. .....-|..+++
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~---~~~al~~l~~~~~~~~~~~~~~dliilD~--~l~~~~g~~~~~ 79 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTD---GTSALNYLFGDDKSGRVSAGRAQLVLLDL--NLPDMTGIDILK 79 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESS---HHHHHHHHHCTTSSSGGGTTCBEEEEECS--BCSSSBHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCC---HHHHHHHHhccccccccccCCCCEEEEeC--CCCCCcHHHHHH
Confidence 5778888654 345677777777763 5666554 677777774 357777621 112223456676
Q ss_pred HHhC-----CCcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHh
Q 011690 390 MFGC-----GLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFK 433 (479)
Q Consensus 390 ama~-----G~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~ 433 (479)
.+.. ++|||...... ..+.++.|..+++.+ +.++|.+.|.++..
T Consensus 80 ~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 134 (152)
T 3heb_A 80 LVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGL 134 (152)
T ss_dssp HHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 6543 67877764332 235567788899995 47888888877654
No 140
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=23.13 E-value=2.9e+02 Score=22.12 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=67.3
Q ss_pred CCCEEEEEEecCC-ChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHH--cCCEEEEcccCCCCCCCcHHHHHHHh---
Q 011690 320 YPRLLFIITGKGP-DKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFG--- 392 (479)
Q Consensus 320 ~p~~~l~IvG~G~-~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~llEama--- 392 (479)
.+..+++|+.+.+ ..+.+++..++.+. ..|..... .++....+. ..|++++=. .....-+..+++.+.
T Consensus 13 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~a~~~l~~~~~dlii~d~--~l~~~~g~~~~~~l~~~~ 87 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADD---GAAALELIKAHLPDVALLDY--RMPGMDGAQVAAAVRSYE 87 (152)
T ss_dssp -CCEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESS---HHHHHHHHHHHCCSEEEEET--TCSSSCHHHHHHHHHHTT
T ss_pred CceEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCC---HHHHHHHHHhcCCCEEEEeC--CCCCCCHHHHHHHHHhcC
Confidence 4568899998764 34566666666653 22323333 566666554 458877631 112223446666554
Q ss_pred CCCcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHhc
Q 011690 393 CGLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFKG 434 (479)
Q Consensus 393 ~G~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~ 434 (479)
..+|||...... ..+.++.|..+++.. +.++|.+++..++..
T Consensus 88 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 88 LPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp CSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcC
Confidence 457777654322 335677788999994 488999999999885
No 141
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.96 E-value=2.8e+02 Score=25.98 Aligned_cols=26 Identities=12% Similarity=0.037 Sum_probs=17.7
Q ss_pred CChhHHHH-HHHHHhhCCCcEEEEecCC
Q 011690 17 RSPRMQYQ-ALSLARQMSLEVDVVAYGG 43 (479)
Q Consensus 17 ~~~r~~~~-a~~La~~~G~eV~Vv~~~~ 43 (479)
.++.+..+ +..|+++ |++|.++....
T Consensus 13 atG~iG~~l~~~L~~~-G~~V~~~~r~~ 39 (341)
T 3enk_A 13 GAGYIGSHTAVELLAH-GYDVVIADNLV 39 (341)
T ss_dssp TTSHHHHHHHHHHHHT-TCEEEEECCCS
T ss_pred CCcHHHHHHHHHHHHC-CCcEEEEecCC
Confidence 34555544 6778886 99999887544
No 142
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=22.91 E-value=90 Score=30.38 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=53.0
Q ss_pred CEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC----------cchHHHHHHcCCEEEEcc--cCCCCCCCcHHHHH
Q 011690 322 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS----------AEDYPLLLGSADLGVCLH--TSSSGLDLPMKVVD 389 (479)
Q Consensus 322 ~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~----------~~~~~~~l~~adi~v~p~--~~s~~e~~p~~llE 389 (479)
+-++-|+|-|.....+-+.++..|. +|......-. ..++.++++.||++++-. +.....-+....+.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 217 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLD 217 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHh
Confidence 4689999999887788777777765 4555432011 147899999999987732 22212224556777
Q ss_pred HHhCCCcEEEecCcc
Q 011690 390 MFGCGLPVCAVSYSC 404 (479)
Q Consensus 390 ama~G~PVIas~~~~ 404 (479)
.|--|.-+|-+..|+
T Consensus 218 ~mk~gailIN~aRG~ 232 (315)
T 3pp8_A 218 QLPDGAYVLNLARGV 232 (315)
T ss_dssp TSCTTEEEEECSCGG
T ss_pred hCCCCCEEEECCCCh
Confidence 777776666665554
No 143
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=22.84 E-value=2.1e+02 Score=26.88 Aligned_cols=50 Identities=18% Similarity=0.180 Sum_probs=31.7
Q ss_pred EecCCC-CChhHHHHHHHHHhhCCCcEEEEecCCCCC--cccccCCCCeEEEEee
Q 011690 11 VLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGSKP--HAAILEHPSIHIHTMT 62 (479)
Q Consensus 11 ~~~~~g-~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~--~~~~~~~~gi~i~~~~ 62 (479)
+.+|=| .++++...+..|.+. | +|+||++...+. ...+.-..-+++.++.
T Consensus 6 lTNDDGi~apGi~~L~~~l~~~-g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~ 58 (251)
T 2wqk_A 6 LVNDDGYFSPGINALREALKSL-G-RVVVVAPDRNLSGVGHSLTFTEPLKMRKID 58 (251)
T ss_dssp EECSSCTTCHHHHHHHHHHTTT-S-EEEEEEESSCCTTSCCSCCCSSCEEEEEEE
T ss_pred EEcCCCCCcHHHHHHHHHHHhC-C-CEEEEeeCCCCcccccCcCCCCCceeEEee
Confidence 334434 589999988888774 7 699999875432 1233333446666665
No 144
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=22.69 E-value=1.8e+02 Score=28.19 Aligned_cols=83 Identities=8% Similarity=0.000 Sum_probs=55.3
Q ss_pred CCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC--------cchHHHHHHcCCEEEEc--ccCCCCCCCcHHHHHH
Q 011690 321 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS--------AEDYPLLLGSADLGVCL--HTSSSGLDLPMKVVDM 390 (479)
Q Consensus 321 p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~--------~~~~~~~l~~adi~v~p--~~~s~~e~~p~~llEa 390 (479)
.+-++-|+|-|.....+-+.++..|. +|........ ..++.++++.||++++- .+.+...-+....++.
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~ 223 (331)
T 1xdw_A 145 RNCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKK 223 (331)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhh
Confidence 34689999999877777777777764 4666554111 23678899999998872 2222222245578888
Q ss_pred HhCCCcEEEecCcc
Q 011690 391 FGCGLPVCAVSYSC 404 (479)
Q Consensus 391 ma~G~PVIas~~~~ 404 (479)
|.-|.-+|-+..|+
T Consensus 224 mk~ga~lin~srg~ 237 (331)
T 1xdw_A 224 MKDGAILVNCARGQ 237 (331)
T ss_dssp SCTTEEEEECSCGG
T ss_pred CCCCcEEEECCCcc
Confidence 88887777776555
No 145
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=22.67 E-value=71 Score=27.87 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=27.9
Q ss_pred cceEEEEEecCCCCChhHHHHHHHHHhhCCCc-EEEEe
Q 011690 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLE-VDVVA 40 (479)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~e-V~Vv~ 40 (479)
|+++..||.|++.||+-.+.....++.+.|.. +.|.+
T Consensus 6 m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~S 43 (158)
T 3rof_A 6 MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHS 43 (158)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEe
Confidence 45688899999999999888887777654543 66554
No 146
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=22.39 E-value=2.8e+02 Score=21.71 Aligned_cols=106 Identities=5% Similarity=-0.056 Sum_probs=64.4
Q ss_pred CEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhC-----
Q 011690 322 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC----- 393 (479)
Q Consensus 322 ~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~----- 393 (479)
..+++|+.+.+ ..+.+.+..++.|. .|..... .++....+.. .|++++=. .....-+..+++.+..
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~-~v~~~~~---~~~a~~~l~~~~~dlii~d~--~l~~~~g~~~~~~l~~~~~~~ 80 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSDAGF-HIISADS---GGQCIDLLKKGFSGVVLLDI--MMPGMDGWDTIRAILDNSLEQ 80 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC-EEEEESS---HHHHHHHHHTCCCEEEEEES--CCSSSCHHHHHHHHHHTTCCT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCe-EEEEeCC---HHHHHHHHHhcCCCEEEEeC--CCCCCCHHHHHHHHHhhcccC
Confidence 46788888654 34556666666654 3544443 6777777665 46766521 1112234566776643
Q ss_pred CCcEEEecCc----cchhccccCccEEEeC--CHHHHHHHHHHHHh
Q 011690 394 GLPVCAVSYS----CIEELVKVDKNGLLFS--SSSELADQLLMLFK 433 (479)
Q Consensus 394 G~PVIas~~~----~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~ 433 (479)
.+|||..... ...+.++.|..+++.. +.++|.+.+..++.
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 81 GIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG 126 (142)
T ss_dssp TEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHH
Confidence 5777765322 2345566677788884 47889888888776
No 147
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=22.21 E-value=74 Score=27.63 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=29.1
Q ss_pred cceEEEEEecCCCCChhHHHHHHHHHhhCCCc---EEEEec
Q 011690 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLE---VDVVAY 41 (479)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~e---V~Vv~~ 41 (479)
+++++.||.|++-||+-.+.....++.+.|.+ +.|.+.
T Consensus 7 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SA 47 (161)
T 1d1q_A 7 KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSF 47 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEec
Confidence 35688899999999999888888877755654 666653
No 148
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=22.13 E-value=73 Score=28.20 Aligned_cols=39 Identities=23% Similarity=0.224 Sum_probs=28.6
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhhCCC--cEEEEec
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSL--EVDVVAY 41 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~--eV~Vv~~ 41 (479)
.|+++++||.|++-|||-.+.....++.+.|. .|.|-+.
T Consensus 17 ~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SA 57 (173)
T 4etm_A 17 SMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSA 57 (173)
T ss_dssp SCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEE
T ss_pred CccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEecc
Confidence 34678889999999999888777777765443 4666543
No 149
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=22.00 E-value=59 Score=28.55 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=22.2
Q ss_pred CCCcceEEEEEecCCCCChhHHHHH-HHHHhhCCCcEEEEecCCC
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQA-LSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a-~~La~~~G~eV~Vv~~~~~ 44 (479)
|.+++++.|+..+ -|.+..+...+ ..+.. .|++|.++-....
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~-~g~~v~~~~l~~~ 43 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEE-AGAEVKIRRVRET 43 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHH-HSCEEEEEECCCC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHh-CCCEEEEEehhHh
Confidence 6655666666655 43333333332 22333 4999999875543
No 150
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=22.00 E-value=72 Score=27.73 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=28.7
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhhCCC--cEEEEec
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSL--EVDVVAY 41 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~--eV~Vv~~ 41 (479)
++++++.||.|++.||+-.+.....++.+.|. ++.|.+.
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SA 44 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSA 44 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEE
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEee
Confidence 34567889999999999988877777765565 3666553
No 151
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=21.79 E-value=2e+02 Score=27.59 Aligned_cols=83 Identities=14% Similarity=0.019 Sum_probs=55.7
Q ss_pred CCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC-------cchHHHHHHcCCEEEEcc--cCCCCCCCcHHHHHHH
Q 011690 321 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS-------AEDYPLLLGSADLGVCLH--TSSSGLDLPMKVVDMF 391 (479)
Q Consensus 321 p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~-------~~~~~~~l~~adi~v~p~--~~s~~e~~p~~llEam 391 (479)
.+-++-|+|-|..-..+-+.++..|. +|....+... .+++.++++.||+.++-. +.....-+....++.|
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~m 199 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANA 199 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTC
T ss_pred ecchheeeccCchhHHHHHHHHhhCc-EEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhh
Confidence 34689999999887788888887775 4655544111 237889999999988732 2222222456777888
Q ss_pred hCCCcEEEecCcc
Q 011690 392 GCGLPVCAVSYSC 404 (479)
Q Consensus 392 a~G~PVIas~~~~ 404 (479)
.-|.-+|-+..|+
T Consensus 200 k~gailIN~aRG~ 212 (290)
T 3gvx_A 200 RKNLTIVNVARAD 212 (290)
T ss_dssp CTTCEEEECSCGG
T ss_pred hcCceEEEeehhc
Confidence 7777777776555
No 152
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=21.68 E-value=1.4e+02 Score=25.97 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=38.6
Q ss_pred HHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc------EEEeCCHHHHHHHHHHHH
Q 011690 363 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN------GLLFSSSSELADQLLMLF 432 (479)
Q Consensus 363 ~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~------G~l~~~~~~la~~l~~l~ 432 (479)
..+..||++|.-.. ....|...-+-=|.+.|+||++..... +.-++ .+.+ -+.. +.+++...|...+
T Consensus 73 ~~i~~aD~vva~~~-~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M~-~g~~~~~~~~~~~y-~~~el~~~l~~~~ 149 (165)
T 2khz_A 73 NWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMI-RGAADGSRFQVWDY-AEGEVETMLDRYF 149 (165)
T ss_dssp HHHHHCSEEEEECS-SCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHHH-HHTCCSSSEEEEEC-CTTTHHHHHHHHH
T ss_pred HHHHhCCEEEEECC-CCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhhh-cccCccceeEEEec-CHHHHHHHHHHHH
Confidence 57999999987432 111122223334789999999974222 11111 1111 1223 6677777777777
Q ss_pred hc
Q 011690 433 KG 434 (479)
Q Consensus 433 ~~ 434 (479)
+.
T Consensus 150 ~~ 151 (165)
T 2khz_A 150 EA 151 (165)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 153
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=21.68 E-value=71 Score=25.27 Aligned_cols=64 Identities=22% Similarity=0.216 Sum_probs=46.0
Q ss_pred CCCEEEEEEecC-CChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEE
Q 011690 320 YPRLLFIITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 398 (479)
Q Consensus 320 ~p~~~l~IvG~G-~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVI 398 (479)
..+..+++.|.= ..++++++.++++|- .+.+. ++ ...|++|+- +.-+.|+-.|...|+|||
T Consensus 8 l~G~~~v~TG~l~~~R~e~~~~i~~~Gg---~v~~s-Vs--------kkt~~LV~g------~~~gsK~~kA~~lgI~Ii 69 (92)
T 1l7b_A 8 LKGLTFVITGELSRPREEVKALLRRLGA---KVTDS-VS--------RKTSYLVVG------ENPGSKLEKARALGVPTL 69 (92)
T ss_dssp STTCEEECSTTTTSCHHHHHHHHHHTTC---EEESC-CS--------SSCCCBEEC------SSSSTTHHHHHCSSSCCE
T ss_pred cCCcEEEEecCCCCCHHHHHHHHHHcCC---EEeCc-cc--------CCeeEEEeC------CCCChHHHHHHHcCCcEE
Confidence 567899999942 278999999999873 24455 33 356777763 223469999999999998
Q ss_pred Eec
Q 011690 399 AVS 401 (479)
Q Consensus 399 as~ 401 (479)
.-+
T Consensus 70 ~E~ 72 (92)
T 1l7b_A 70 TEE 72 (92)
T ss_dssp EHH
T ss_pred eHH
Confidence 654
No 154
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=21.61 E-value=2.8e+02 Score=21.30 Aligned_cols=106 Identities=14% Similarity=0.175 Sum_probs=63.8
Q ss_pred EEEEEEecCCC-hHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhC-----C
Q 011690 323 LLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC-----G 394 (479)
Q Consensus 323 ~~l~IvG~G~~-~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~-----G 394 (479)
.+++|+.+.+. .+.++...++.+...|..... .++....+.. .|++++=. .....-|..+++.+.. .
T Consensus 5 ~~ilivdd~~~~~~~l~~~l~~~~~~~v~~~~~---~~~a~~~~~~~~~dlvi~D~--~l~~~~g~~l~~~l~~~~~~~~ 79 (128)
T 1jbe_A 5 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAED---GVDALNKLQAGGYGFVISDW--NMPNMDGLELLKTIRAXXAMSA 79 (128)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCCCEEEESS---HHHHHHHHTTCCCCEEEEES--CCSSSCHHHHHHHHHC--CCTT
T ss_pred cEEEEECCCHHHHHHHHHHHHHcCCcEEEeeCC---HHHHHHHHHhcCCCEEEEeC--CCCCCCHHHHHHHHHhhcccCC
Confidence 56778876542 345566666656544554443 5666666654 47777621 1111234567777753 5
Q ss_pred CcEEEecCcc----chhccccCccEEEeC--CHHHHHHHHHHHHh
Q 011690 395 LPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLMLFK 433 (479)
Q Consensus 395 ~PVIas~~~~----~~e~i~~~~~G~l~~--~~~~la~~l~~l~~ 433 (479)
+|+|...... ..+.++.|..+++.. +.+++.+.+..++.
T Consensus 80 ~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 80 LPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp CCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHHHHHHHHHH
Confidence 6877654322 345566788899984 47888888887765
No 155
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=21.58 E-value=41 Score=29.68 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=22.5
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCC
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~ 43 (479)
|.++|...|+..|++.+.--....|...+. +|+||+|+....
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA-~G~eV~iFfTf~ 43 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAARE-MEIEVTIFCAFW 43 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHH-TTCEEEEEECGG
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHH-cCCCEEEEEeeh
Confidence 566565555555554321112222333344 699999996443
No 156
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=21.57 E-value=3.7e+02 Score=26.84 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=53.6
Q ss_pred CCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC--------------------------------------cchHH
Q 011690 321 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS--------------------------------------AEDYP 362 (479)
Q Consensus 321 p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~--------------------------------------~~~~~ 362 (479)
++.+..|+|-|..-...-+.++.+|. +|..... -+ .+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~-~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDV-RPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECS-SGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeC-CHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 55799999999776666777777775 4555432 11 13567
Q ss_pred HHHHcCCEEEEcccC-C--CCCCCcHHHHHHHhCCCcEEEec--Cccchh
Q 011690 363 LLLGSADLGVCLHTS-S--SGLDLPMKVVDMFGCGLPVCAVS--YSCIEE 407 (479)
Q Consensus 363 ~~l~~adi~v~p~~~-s--~~e~~p~~llEama~G~PVIas~--~~~~~e 407 (479)
+.++.||+++..... . ...=+....++.|.-|.-+|-.. .||.-|
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence 888999999863111 1 11114567888888787776653 455444
No 157
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=21.51 E-value=4.8e+02 Score=25.86 Aligned_cols=113 Identities=15% Similarity=0.167 Sum_probs=57.3
Q ss_pred CEEEEE-Eec-CCChHHHHHHHHHcCCCcEEEecC-CCCcchHHHHHHcCCEE--EEcccCCCCCC---CcH-------H
Q 011690 322 RLLFII-TGK-GPDKESYEEKIRRLRLKRVAFRTM-WLSAEDYPLLLGSADLG--VCLHTSSSGLD---LPM-------K 386 (479)
Q Consensus 322 ~~~l~I-vG~-G~~~~~l~~~~~~~~l~~V~f~G~-~~~~~~~~~~l~~adi~--v~p~~~s~~e~---~p~-------~ 386 (479)
++.+.+ +|+ |...+.+.+.+..++.++|-- |. -+...++...+..-.|. +|| .| ..- +|. .
T Consensus 210 Gl~~t~HAGE~~~p~~~i~~al~~lga~RIgH-G~~~~~d~~L~~~l~~~~I~lEvCP--~S-N~~l~~v~~~~~~~~HP 285 (380)
T 4gxw_A 210 GFRTTAHAGEFGMPWRNVETAVDLLHVDRVDH-GYTIVDNPELCARYAERGIVFTVVP--TN-SYYLRTLPPDQWAERHP 285 (380)
T ss_dssp TCEEEEEESCTTCCHHHHHHHHHTSCCSEEEE-CGGGGGCHHHHHHHHHHTCEEEECT--TC-HHHHHHSCTTTHHHHCG
T ss_pred CCCeeeeccccCCchHHHHHHHHHcCCccccc-ceeeccChHHHHHHHHhCceeEECC--cc-hhhhcccccccccccCh
Confidence 355544 453 323456666666677777653 42 12344677777777775 566 12 110 110 1
Q ss_pred HHHHHhCCCcEEEe-cCccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 387 VVDMFGCGLPVCAV-SYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 387 llEama~G~PVIas-~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+-..+..|+||..+ |.+++.. .+ |.+-...+.+.+.-+.+.+..+..|+.+.
T Consensus 286 ~~~l~~~Gv~vtinTDDp~~f~-----------t~---Ls~Ey~~~~~~~gls~~dl~~l~~nsi~~ 338 (380)
T 4gxw_A 286 MRKMPGLGLKIHPNTDDPTLHK-----------VN---PSEAWELMFSHFGFTIADLKQFMLNGIDG 338 (380)
T ss_dssp GGGTGGGTCEEEECCBSHHHHT-----------CC---HHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEECCCCchhhC-----------CC---HHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 34456778886543 3322210 11 33333334443333567777777777764
No 158
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=21.49 E-value=1.9e+02 Score=29.90 Aligned_cols=82 Identities=11% Similarity=0.028 Sum_probs=57.4
Q ss_pred CCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCC-----------CCcchHHHHHHcCCEEEEcccCCCCCCCcHHHH
Q 011690 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW-----------LSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV 388 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~-----------~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ll 388 (479)
..+-++.|+|-|.--..+-+.++.+|. +|.....- ....++.++++.||+++.. +...+ -+....+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~a-tgt~~-lI~~e~l 321 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTT-TGNKD-VITIDHM 321 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEEC-CSSSS-SBCHHHH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEEC-CCCcc-ccCHHHH
Confidence 456799999999877788888887775 57666420 0123577899999999874 11122 2566889
Q ss_pred HHHhCCCcEEEecCcc
Q 011690 389 DMFGCGLPVCAVSYSC 404 (479)
Q Consensus 389 Eama~G~PVIas~~~~ 404 (479)
+.|--|.-+|.+..+.
T Consensus 322 ~~MK~GAILINvGRgd 337 (464)
T 3n58_A 322 RKMKDMCIVGNIGHFD 337 (464)
T ss_dssp HHSCTTEEEEECSSST
T ss_pred hcCCCCeEEEEcCCCC
Confidence 9998888888776554
No 159
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=21.45 E-value=72 Score=27.81 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=28.5
Q ss_pred CcceEEEEEecCCCCChhHHHHHHHHHhhCCC--cEEEEe
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSL--EVDVVA 40 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~--eV~Vv~ 40 (479)
+|+++..||.|++.||+-.+.....++.+.|. .+.|.+
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~S 42 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDS 42 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEe
Confidence 34668889999999999988888888765454 466655
No 160
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=21.42 E-value=3.4e+02 Score=22.30 Aligned_cols=38 Identities=8% Similarity=-0.003 Sum_probs=23.4
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcC-CcEEEEecCc
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNF 137 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~-~~~ii~~h~~ 137 (479)
.+.|+|++..+..-....+...++...+ .+++...++.
T Consensus 70 ~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 70 DRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp TTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred hhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 6889988887655445555556666644 4555555544
No 161
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=21.25 E-value=1.5e+02 Score=26.35 Aligned_cols=57 Identities=12% Similarity=0.223 Sum_probs=32.0
Q ss_pred ceEEEEEecCCCCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCcc---ccc----CCCCeEEEEee
Q 011690 5 GRACVVVLGDLGRSP-RMQYQALSLARQMSLEVDVVAYGGSKPHA---AIL----EHPSIHIHTMT 62 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~-r~~~~a~~La~~~G~eV~Vv~~~~~~~~~---~~~----~~~gi~i~~~~ 62 (479)
+|+.|++.+++...+ .+...+..+.+ .|+.|++++.+...... .+. ...+-++.++|
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~-~gi~v~~Ig~G~~~~~~~l~~la~~~n~~~~s~~~~~~ 171 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKK-NNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIP 171 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHH-TTEEEEEEEESCC---CHHHHHHHHHCSTTCCEEEEEC
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHH-CCCEEEEEEeCCCCccHHHHHHHHhccCCCceEEEEec
Confidence 355666656653323 33444555555 59999999987653211 111 12567888888
No 162
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=21.24 E-value=55 Score=27.50 Aligned_cols=40 Identities=20% Similarity=0.063 Sum_probs=21.1
Q ss_pred cceEEEEEecCCCCChhH---HHHHHHHHhhCCCcEEEEecCCC
Q 011690 4 RGRACVVVLGDLGRSPRM---QYQALSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~---~~~a~~La~~~G~eV~Vv~~~~~ 44 (479)
++++.|++...-..+.+. ...|...+. .||+|.|+-..+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a-~g~eV~vFf~~dG 57 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISAS-MEYETSVFFMIXG 57 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHH-TTCEEEEEECTTG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEeCc
Confidence 345555554321123332 233444445 5999999976654
No 163
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=21.22 E-value=2e+02 Score=28.44 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=57.5
Q ss_pred CCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCC-------------cchHHHHHHcCCEEEEc--ccCCCCCCCcH
Q 011690 321 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS-------------AEDYPLLLGSADLGVCL--HTSSSGLDLPM 385 (479)
Q Consensus 321 p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~-------------~~~~~~~l~~adi~v~p--~~~s~~e~~p~ 385 (479)
.+-++-|+|-|..-..+-+.++..|. +|....+ -+ .+++.++++.||++++- .+.....-+..
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr-~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~ 240 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDR-LQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNK 240 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECS-SCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSH
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCC-CccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcH
Confidence 45689999999877777777777765 3666553 11 13688999999998873 22222222567
Q ss_pred HHHHHHhCCCcEEEecCccc
Q 011690 386 KVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 386 ~llEama~G~PVIas~~~~~ 405 (479)
..+..|.-|.-+|-+..|+.
T Consensus 241 ~~l~~mk~gailIN~aRG~~ 260 (351)
T 3jtm_A 241 ELIGKLKKGVLIVNNARGAI 260 (351)
T ss_dssp HHHHHSCTTEEEEECSCGGG
T ss_pred HHHhcCCCCCEEEECcCchh
Confidence 88899988888888776653
No 164
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=21.11 E-value=2.6e+02 Score=28.59 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=20.5
Q ss_pred EEecCCCCChhHH---HHHHHHHhhCCCcEEEEecCCC
Q 011690 10 VVLGDLGRSPRMQ---YQALSLARQMSLEVDVVAYGGS 44 (479)
Q Consensus 10 ~~~~~~g~~~r~~---~~a~~La~~~G~eV~Vv~~~~~ 44 (479)
++.|. +++|-.. ..|..|+++ |+.|.+++....
T Consensus 104 livG~-~G~GKTTt~~kLA~~l~~~-G~kVllv~~D~~ 139 (443)
T 3dm5_A 104 LMVGI-QGSGKTTTVAKLARYFQKR-GYKVGVVCSDTW 139 (443)
T ss_dssp EEECC-TTSSHHHHHHHHHHHHHTT-TCCEEEEECCCS
T ss_pred EEECc-CCCCHHHHHHHHHHHHHHC-CCeEEEEeCCCc
Confidence 33443 5555443 356666675 999999986543
No 165
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=20.91 E-value=2.2e+02 Score=24.77 Aligned_cols=39 Identities=8% Similarity=-0.065 Sum_probs=26.3
Q ss_pred HHHHHcCCEEEEcccCC--CCCCCcHHHHH---HHhCCCcEEEec
Q 011690 362 PLLLGSADLGVCLHTSS--SGLDLPMKVVD---MFGCGLPVCAVS 401 (479)
Q Consensus 362 ~~~l~~adi~v~p~~~s--~~e~~p~~llE---ama~G~PVIas~ 401 (479)
...+..||++|.-...- ...+ +.+.+| |.|.|+||++..
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D-~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPD-CGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCC-HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCC-CcHHHHHHHHHHCCCEEEEEE
Confidence 57899999998753321 1222 235666 789999999964
No 166
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=20.60 E-value=83 Score=30.04 Aligned_cols=44 Identities=14% Similarity=0.275 Sum_probs=29.8
Q ss_pred CCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCE
Q 011690 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADL 370 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi 370 (479)
.++..++++|+|++. ++.+++++++-+.+ -+..|+..+..+-++
T Consensus 228 G~k~~yvvIGDG~eE---e~AAk~~n~PFwrI----~~h~Dl~~l~~al~l 271 (274)
T 3geb_A 228 GRKAVYVVIGDGVEE---EQGAKKHNMPFWRI----SCHADLEALRHALEL 271 (274)
T ss_dssp CTTSEEEEEESSHHH---HHHHHHTTCCEEEC----CSHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCHHH---HHHHHHcCCCeEEe----ecCccHHHHHHhhcc
Confidence 588999999999743 34666777664433 346777777666544
No 167
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=20.46 E-value=70 Score=28.49 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=27.9
Q ss_pred ceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEec
Q 011690 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAY 41 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~ 41 (479)
.++++||.|++-||+-.+.....++++.|.++.|.+.
T Consensus 35 mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SA 71 (180)
T 4egs_A 35 MRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSA 71 (180)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEe
Confidence 4688899999999998877766666555767766653
No 168
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.17 E-value=1.1e+02 Score=27.00 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=28.6
Q ss_pred CCCcceEEEEEecCCCCChhHHHH-HHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEee
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~-a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~ 62 (479)
|.++++++ +. |.++.+..+ +..|+++ |++|.+++....... .. ..+++++...
T Consensus 1 M~~m~~il--It---GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~~--~~~~~~~~~D 54 (227)
T 3dhn_A 1 MEKVKKIV--LI---GASGFVGSALLNEALNR-GFEVTAVVRHPEKIK-IE--NEHLKVKKAD 54 (227)
T ss_dssp --CCCEEE--EE---TCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCC-CC--CTTEEEECCC
T ss_pred CCCCCEEE--EE---cCCchHHHHHHHHHHHC-CCEEEEEEcCcccch-hc--cCceEEEEec
Confidence 66666543 32 444666554 5677775 999999976543211 11 2456655544
No 169
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=20.01 E-value=2e+02 Score=28.39 Aligned_cols=83 Identities=17% Similarity=0.098 Sum_probs=56.8
Q ss_pred CCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCC-C---------cchHHHHHHcCCEEEEcc--cCCCCCCCcHHHH
Q 011690 321 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-S---------AEDYPLLLGSADLGVCLH--TSSSGLDLPMKVV 388 (479)
Q Consensus 321 p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~-~---------~~~~~~~l~~adi~v~p~--~~s~~e~~p~~ll 388 (479)
.+-++-|+|-|.....+-+.++..|. +|....+.- + .+++.++++.||++++-. +.+...-+....+
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l 250 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRI 250 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHH
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHH
Confidence 35689999999877777777777664 566665411 1 147889999999987732 2222222566788
Q ss_pred HHHhCCCcEEEecCcc
Q 011690 389 DMFGCGLPVCAVSYSC 404 (479)
Q Consensus 389 Eama~G~PVIas~~~~ 404 (479)
..|--|.-+|-+..|+
T Consensus 251 ~~mk~gailIN~aRG~ 266 (345)
T 4g2n_A 251 AKIPEGAVVINISRGD 266 (345)
T ss_dssp HHSCTTEEEEECSCGG
T ss_pred hhCCCCcEEEECCCCc
Confidence 8888888788776655
Done!