Query 011692
Match_columns 479
No_of_seqs 259 out of 827
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 13:23:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 99.8 1.1E-18 3.6E-23 186.4 19.7 157 62-303 305-462 (490)
2 3edt_B KLC 2, kinesin light ch 99.7 1.7E-16 5.7E-21 147.8 22.9 160 64-308 41-201 (283)
3 3nf1_A KLC 1, kinesin light ch 99.7 3.9E-15 1.3E-19 141.1 23.5 160 64-308 25-185 (311)
4 3edt_B KLC 2, kinesin light ch 99.7 3E-15 1E-19 139.2 20.8 158 64-306 83-282 (283)
5 3qww_A SET and MYND domain-con 99.7 8.8E-16 3E-20 161.5 18.6 136 63-283 295-431 (433)
6 3nf1_A KLC 1, kinesin light ch 99.7 6.6E-15 2.3E-19 139.5 22.7 159 65-308 68-227 (311)
7 3vtx_A MAMA; tetratricopeptide 99.6 2.6E-15 9E-20 134.2 16.0 169 66-308 5-173 (184)
8 3ulq_A Response regulator aspa 99.6 5E-15 1.7E-19 148.3 18.3 150 70-308 107-256 (383)
9 3ro3_A PINS homolog, G-protein 99.6 3.3E-14 1.1E-18 120.7 20.1 154 64-307 7-160 (164)
10 3qwp_A SET and MYND domain-con 99.6 3.1E-15 1.1E-19 156.9 16.6 139 65-288 286-425 (429)
11 3gw4_A Uncharacterized protein 99.6 3.8E-14 1.3E-18 127.1 20.9 155 65-308 25-179 (203)
12 3q15_A PSP28, response regulat 99.6 9.9E-15 3.4E-19 146.4 17.7 154 66-308 101-254 (378)
13 3ulq_A Response regulator aspa 99.6 6.8E-14 2.3E-18 140.1 21.8 156 64-308 141-296 (383)
14 3u3w_A Transcriptional activat 99.6 5.3E-14 1.8E-18 136.7 18.6 100 207-308 169-269 (293)
15 4gyw_A UDP-N-acetylglucosamine 99.6 3.1E-14 1.1E-18 158.4 18.3 172 64-311 7-180 (723)
16 1qqe_A Vesicular transport pro 99.6 1.1E-13 3.8E-18 135.0 19.9 151 66-306 37-188 (292)
17 3qww_A SET and MYND domain-con 99.6 1.4E-14 4.8E-19 152.4 13.3 107 205-311 310-417 (433)
18 2qfc_A PLCR protein; TPR, HTH, 99.6 1.2E-13 4.1E-18 134.2 18.6 194 63-307 72-268 (293)
19 3q15_A PSP28, response regulat 99.5 3.6E-13 1.2E-17 135.1 21.2 154 63-306 138-291 (378)
20 2ifu_A Gamma-SNAP; membrane fu 99.5 2.1E-13 7.3E-18 134.0 19.0 148 68-306 38-185 (307)
21 3n71_A Histone lysine methyltr 99.5 5.2E-14 1.8E-18 150.2 13.6 107 205-311 321-428 (490)
22 3urz_A Uncharacterized protein 99.5 1.8E-13 6.1E-18 127.0 14.9 141 66-307 4-188 (208)
23 4a1s_A PINS, partner of inscut 99.5 8E-13 2.7E-17 131.7 19.7 192 63-308 45-255 (411)
24 1qqe_A Vesicular transport pro 99.5 4.1E-13 1.4E-17 131.0 16.6 156 65-308 76-231 (292)
25 4a1s_A PINS, partner of inscut 99.5 1.1E-12 3.6E-17 130.8 19.6 99 206-307 99-214 (411)
26 4gyw_A UDP-N-acetylglucosamine 99.5 4.4E-13 1.5E-17 149.2 18.5 137 66-268 43-179 (723)
27 2pl2_A Hypothetical conserved 99.5 3.3E-13 1.1E-17 126.1 14.7 133 66-306 5-148 (217)
28 3sf4_A G-protein-signaling mod 99.5 1.5E-12 5.2E-17 127.9 19.1 99 207-308 101-219 (406)
29 4i17_A Hypothetical protein; T 99.5 1.6E-12 5.3E-17 120.3 17.5 141 67-308 8-149 (228)
30 2ifu_A Gamma-SNAP; membrane fu 99.5 1.7E-12 5.9E-17 127.4 18.0 150 65-306 75-224 (307)
31 3sf4_A G-protein-signaling mod 99.4 4.3E-12 1.5E-16 124.7 20.2 154 65-308 126-299 (406)
32 2pl2_A Hypothetical conserved 99.4 2E-12 7E-17 120.6 16.8 143 66-306 39-181 (217)
33 3uq3_A Heat shock protein STI1 99.4 6.8E-12 2.3E-16 115.4 20.1 149 64-307 3-170 (258)
34 3qwp_A SET and MYND domain-con 99.4 1.9E-13 6.3E-18 143.4 10.8 106 206-311 300-406 (429)
35 4i17_A Hypothetical protein; T 99.4 5.2E-13 1.8E-17 123.5 12.6 125 67-292 43-169 (228)
36 3ro2_A PINS homolog, G-protein 99.4 5.1E-12 1.7E-16 119.5 19.6 99 207-308 97-215 (338)
37 3ro2_A PINS homolog, G-protein 99.4 4.2E-12 1.4E-16 120.0 19.0 150 66-307 5-174 (338)
38 4gcn_A Protein STI-1; structur 99.4 2.7E-12 9.2E-17 110.6 15.4 109 63-264 5-113 (127)
39 4gco_A Protein STI-1; structur 99.4 2.1E-12 7E-17 111.6 14.1 115 64-286 11-125 (126)
40 4ga2_A E3 SUMO-protein ligase 99.4 1.6E-13 5.5E-18 121.5 7.0 129 71-307 2-131 (150)
41 4gcn_A Protein STI-1; structur 99.4 3.5E-12 1.2E-16 109.9 15.1 91 207-305 22-112 (127)
42 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1.5E-12 5.1E-17 118.4 12.5 142 62-306 2-151 (213)
43 3u3w_A Transcriptional activat 99.4 9.9E-12 3.4E-16 120.6 18.9 100 207-308 129-228 (293)
44 2qfc_A PLCR protein; TPR, HTH, 99.4 3.7E-12 1.2E-16 123.7 15.4 100 207-308 129-228 (293)
45 1a17_A Serine/threonine protei 99.4 1.2E-11 4.2E-16 106.8 16.5 141 61-307 8-148 (166)
46 2h6f_A Protein farnesyltransfe 99.4 2.5E-12 8.7E-17 132.5 14.0 53 63-123 94-146 (382)
47 3qky_A Outer membrane assembly 99.4 7.6E-12 2.6E-16 118.5 16.0 143 66-307 15-179 (261)
48 1fch_A Peroxisomal targeting s 99.4 5.7E-12 2E-16 123.0 15.5 97 207-310 265-364 (368)
49 3uq3_A Heat shock protein STI1 99.4 1.2E-11 4.1E-16 113.8 16.8 167 66-307 38-204 (258)
50 4g1t_A Interferon-induced prot 99.4 1.1E-11 3.8E-16 126.0 17.8 147 66-305 51-204 (472)
51 4eqf_A PEX5-related protein; a 99.4 1.7E-11 5.7E-16 120.6 18.1 91 204-307 188-278 (365)
52 4eqf_A PEX5-related protein; a 99.4 1.2E-11 4.1E-16 121.6 16.4 168 66-307 65-244 (365)
53 3qky_A Outer membrane assembly 99.3 4.5E-11 1.5E-15 113.1 19.2 169 66-321 52-249 (261)
54 2vq2_A PILW, putative fimbrial 99.3 5.2E-11 1.8E-15 107.2 18.7 169 64-306 6-177 (225)
55 3gyz_A Chaperone protein IPGC; 99.3 1.4E-12 4.9E-17 117.4 7.6 84 207-305 50-133 (151)
56 2fo7_A Synthetic consensus TPR 99.3 4.8E-11 1.6E-15 97.8 16.2 131 67-305 2-132 (136)
57 3gw4_A Uncharacterized protein 99.3 3.9E-11 1.3E-15 107.4 16.7 99 207-307 40-138 (203)
58 2hr2_A Hypothetical protein; a 99.3 3.3E-11 1.1E-15 110.7 16.3 125 59-268 4-136 (159)
59 3as5_A MAMA; tetratricopeptide 99.3 7.4E-11 2.5E-15 102.4 17.6 165 66-306 8-174 (186)
60 2ho1_A Type 4 fimbrial biogene 99.3 4.1E-11 1.4E-15 111.1 16.6 51 65-123 36-86 (252)
61 1hz4_A MALT regulatory protein 99.3 9.5E-11 3.2E-15 116.0 20.2 153 65-307 13-166 (373)
62 1fch_A Peroxisomal targeting s 99.3 4.8E-11 1.7E-15 116.4 17.5 85 207-306 195-281 (368)
63 4gco_A Protein STI-1; structur 99.3 2.5E-11 8.5E-16 104.7 13.7 84 207-305 27-110 (126)
64 3u4t_A TPR repeat-containing p 99.3 3.3E-11 1.1E-15 112.8 14.7 174 66-307 74-252 (272)
65 4abn_A Tetratricopeptide repea 99.3 2E-11 6.8E-16 128.1 14.6 175 66-305 102-287 (474)
66 1p5q_A FKBP52, FK506-binding p 99.3 5.3E-11 1.8E-15 119.3 16.9 145 62-306 143-295 (336)
67 2r5s_A Uncharacterized protein 99.3 9.1E-12 3.1E-16 111.8 9.8 157 67-305 7-173 (176)
68 3qou_A Protein YBBN; thioredox 99.3 4E-11 1.4E-15 117.1 15.2 162 66-306 117-285 (287)
69 3hym_B Cell division cycle pro 99.3 4.2E-11 1.4E-15 114.2 14.9 172 66-305 90-265 (330)
70 1xnf_A Lipoprotein NLPI; TPR, 99.3 3.8E-11 1.3E-15 112.0 14.2 53 64-124 41-93 (275)
71 3upv_A Heat shock protein STI1 99.3 2.1E-10 7E-15 96.5 17.4 122 65-288 3-124 (126)
72 1w3b_A UDP-N-acetylglucosamine 99.3 5.8E-11 2E-15 118.0 16.1 168 66-307 67-234 (388)
73 3as5_A MAMA; tetratricopeptide 99.3 5.9E-11 2E-15 103.1 14.2 84 207-305 56-139 (186)
74 3u4t_A TPR repeat-containing p 99.3 1.8E-11 6E-16 114.7 11.4 168 67-308 4-174 (272)
75 3cv0_A Peroxisome targeting si 99.3 8E-11 2.7E-15 112.1 15.4 144 66-309 172-319 (327)
76 3hym_B Cell division cycle pro 99.3 2.9E-11 9.8E-16 115.4 12.3 172 66-306 125-300 (330)
77 2q7f_A YRRB protein; TPR, prot 99.2 2.3E-10 7.8E-15 104.7 17.2 165 66-306 57-223 (243)
78 1w3b_A UDP-N-acetylglucosamine 99.2 7.2E-11 2.5E-15 117.3 14.8 164 66-305 203-368 (388)
79 2vgx_A Chaperone SYCD; alterna 99.2 5.5E-11 1.9E-15 105.2 12.2 86 207-307 35-120 (148)
80 2ho1_A Type 4 fimbrial biogene 99.2 1.9E-10 6.5E-15 106.6 16.5 134 66-305 71-204 (252)
81 3rkv_A Putative peptidylprolyl 99.2 1.2E-10 4.1E-15 102.7 14.4 112 61-264 6-127 (162)
82 2h6f_A Protein farnesyltransfe 99.2 4.5E-11 1.5E-15 123.2 13.4 135 66-308 131-272 (382)
83 1hz4_A MALT regulatory protein 99.2 4.1E-10 1.4E-14 111.4 19.3 153 64-306 51-204 (373)
84 2q7f_A YRRB protein; TPR, prot 99.2 3.7E-10 1.3E-14 103.3 17.4 166 65-306 22-189 (243)
85 3sz7_A HSC70 cochaperone (SGT) 99.2 2.1E-10 7.2E-15 101.3 14.9 103 64-266 9-111 (164)
86 2vq2_A PILW, putative fimbrial 99.2 4.3E-10 1.5E-14 101.1 17.2 167 66-305 42-211 (225)
87 2vsy_A XCC0866; transferase, g 99.2 2.4E-10 8.1E-15 121.3 16.8 133 66-306 23-158 (568)
88 2hr2_A Hypothetical protein; a 99.2 2.5E-10 8.5E-15 104.9 14.4 98 207-305 25-131 (159)
89 3ro3_A PINS homolog, G-protein 99.2 6.9E-10 2.3E-14 93.8 15.8 99 207-308 23-121 (164)
90 3ieg_A DNAJ homolog subfamily 99.2 7E-10 2.4E-14 106.4 17.8 136 66-306 3-150 (359)
91 2vyi_A SGTA protein; chaperone 99.2 9.1E-10 3.1E-14 90.2 16.0 124 62-293 8-131 (131)
92 3fp2_A TPR repeat-containing p 99.2 5.3E-10 1.8E-14 114.7 17.7 56 61-124 20-75 (537)
93 4g1t_A Interferon-induced prot 99.2 1.2E-10 4.1E-15 118.3 12.4 143 78-307 23-169 (472)
94 3cv0_A Peroxisome targeting si 99.2 8.5E-10 2.9E-14 105.0 17.5 87 206-307 151-237 (327)
95 2fbn_A 70 kDa peptidylprolyl i 99.2 2.9E-10 9.8E-15 103.5 13.5 137 59-296 31-176 (198)
96 2pzi_A Probable serine/threoni 99.2 2.9E-11 1E-15 132.7 8.1 133 67-308 434-566 (681)
97 2yhc_A BAMD, UPF0169 lipoprote 99.2 1.1E-09 3.6E-14 102.3 17.5 92 207-303 110-211 (225)
98 2xpi_A Anaphase-promoting comp 99.2 8E-10 2.8E-14 115.4 18.4 172 66-306 407-580 (597)
99 2xcb_A PCRH, regulatory protei 99.2 2.9E-10 9.9E-15 98.6 12.6 86 207-307 32-117 (142)
100 4ga2_A E3 SUMO-protein ligase 99.2 3.1E-10 1.1E-14 100.2 12.8 119 65-291 30-149 (150)
101 1ouv_A Conserved hypothetical 99.1 8E-10 2.8E-14 104.7 16.3 162 66-305 6-179 (273)
102 1elr_A TPR2A-domain of HOP; HO 99.1 7.7E-10 2.6E-14 90.9 13.9 122 65-288 3-124 (131)
103 3sz7_A HSC70 cochaperone (SGT) 99.1 1.3E-09 4.4E-14 96.2 16.1 85 207-306 25-109 (164)
104 2lni_A Stress-induced-phosphop 99.1 5.8E-10 2E-14 92.4 13.0 119 65-291 15-133 (133)
105 3rkv_A Putative peptidylprolyl 99.1 5.9E-10 2E-14 98.2 13.6 91 207-305 25-126 (162)
106 3ieg_A DNAJ homolog subfamily 99.1 1E-09 3.6E-14 105.2 16.5 88 207-305 248-335 (359)
107 1xnf_A Lipoprotein NLPI; TPR, 99.1 4.2E-10 1.4E-14 104.9 13.0 127 76-306 15-141 (275)
108 2e2e_A Formate-dependent nitri 99.1 4.8E-11 1.7E-15 106.1 6.1 128 70-305 14-144 (177)
109 3gyz_A Chaperone protein IPGC; 99.1 6.8E-10 2.3E-14 99.8 13.6 101 64-264 34-134 (151)
110 3upv_A Heat shock protein STI1 99.1 9.5E-10 3.3E-14 92.4 13.4 85 207-306 18-102 (126)
111 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 4E-10 1.4E-14 117.8 13.5 137 62-298 264-407 (457)
112 2yhc_A BAMD, UPF0169 lipoprote 99.1 2.1E-09 7.1E-14 100.3 16.9 147 66-306 4-177 (225)
113 4b4t_Q 26S proteasome regulato 99.1 1.9E-09 6.5E-14 108.2 17.4 154 64-307 53-206 (434)
114 2gw1_A Mitochondrial precursor 99.1 1.2E-09 4E-14 111.0 16.0 173 66-308 304-481 (514)
115 2y4t_A DNAJ homolog subfamily 99.1 2.1E-09 7E-14 108.0 17.4 89 207-306 271-359 (450)
116 3q49_B STIP1 homology and U bo 99.1 5.8E-09 2E-13 87.8 16.8 102 66-267 9-110 (137)
117 1elr_A TPR2A-domain of HOP; HO 99.1 8E-09 2.7E-13 84.7 16.9 92 207-306 18-109 (131)
118 1p5q_A FKBP52, FK506-binding p 99.1 6.4E-11 2.2E-15 118.7 5.0 128 78-306 125-260 (336)
119 3fp2_A TPR repeat-containing p 99.1 2E-09 7E-14 110.4 16.3 173 66-308 310-494 (537)
120 2y4t_A DNAJ homolog subfamily 99.1 4.1E-09 1.4E-13 105.8 18.2 138 64-306 24-173 (450)
121 2xpi_A Anaphase-promoting comp 99.1 3.5E-09 1.2E-13 110.5 18.1 171 66-305 373-545 (597)
122 1wao_1 Serine/threonine protei 99.1 2.5E-11 8.6E-16 128.0 1.5 130 64-301 4-135 (477)
123 2if4_A ATFKBP42; FKBP-like, al 99.1 4E-10 1.4E-14 113.1 10.0 37 59-95 172-208 (338)
124 2gw1_A Mitochondrial precursor 99.0 3.9E-09 1.3E-13 107.2 16.8 75 234-308 186-269 (514)
125 1ihg_A Cyclophilin 40; ppiase 99.0 1.6E-09 5.6E-14 110.6 13.9 139 59-297 216-362 (370)
126 2vgx_A Chaperone SYCD; alterna 99.0 8E-09 2.7E-13 91.1 16.2 102 64-265 19-120 (148)
127 1ouv_A Conserved hypothetical 99.0 5.7E-09 1.9E-13 98.9 16.0 162 66-305 38-215 (273)
128 4b4t_Q 26S proteasome regulato 99.0 1.4E-08 4.8E-13 101.9 19.0 150 69-307 98-247 (434)
129 2xcb_A PCRH, regulatory protei 99.0 1E-08 3.5E-13 88.7 15.6 102 65-266 17-118 (142)
130 3q49_B STIP1 homology and U bo 99.0 5.9E-09 2E-13 87.8 13.3 86 207-307 23-108 (137)
131 2pzi_A Probable serine/threoni 99.0 1E-09 3.4E-14 120.5 10.7 129 77-306 402-530 (681)
132 2fbn_A 70 kDa peptidylprolyl i 99.0 7.9E-10 2.7E-14 100.6 8.2 91 207-305 52-151 (198)
133 2vsy_A XCC0866; transferase, g 99.0 1.7E-09 5.9E-14 114.6 11.9 120 79-306 2-121 (568)
134 1elw_A TPR1-domain of HOP; HOP 99.0 8.6E-09 2.9E-13 83.0 13.3 115 65-287 3-117 (118)
135 4abn_A Tetratricopeptide repea 99.0 1.2E-09 4.2E-14 114.4 10.4 147 67-313 171-326 (474)
136 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 2.2E-10 7.5E-15 119.8 4.4 127 78-305 246-380 (457)
137 1na0_A Designed protein CTPR3; 99.0 2.2E-08 7.6E-13 81.1 15.4 116 66-289 9-124 (125)
138 3rjv_A Putative SEL1 repeat pr 99.0 9.3E-09 3.2E-13 95.7 14.3 133 66-305 18-158 (212)
139 2c2l_A CHIP, carboxy terminus 98.9 2.7E-09 9.2E-14 103.9 11.0 102 66-267 4-105 (281)
140 1hxi_A PEX5, peroxisome target 98.9 6.4E-09 2.2E-13 88.7 11.3 99 68-266 19-117 (121)
141 3mkr_A Coatomer subunit epsilo 98.9 3.9E-08 1.3E-12 96.4 17.8 161 66-305 101-264 (291)
142 2xev_A YBGF; tetratricopeptide 98.9 1.3E-08 4.3E-13 84.8 12.2 90 207-305 16-105 (129)
143 2xev_A YBGF; tetratricopeptide 98.9 7.8E-08 2.7E-12 79.9 16.6 118 67-283 3-120 (129)
144 2dba_A Smooth muscle cell asso 98.9 1.8E-08 6E-13 85.1 12.7 118 65-287 27-144 (148)
145 3vtx_A MAMA; tetratricopeptide 98.9 1E-08 3.5E-13 91.1 10.6 135 66-266 39-173 (184)
146 2lni_A Stress-induced-phosphop 98.8 2.2E-08 7.5E-13 82.7 11.4 84 208-306 31-114 (133)
147 1zu2_A Mitochondrial import re 98.8 4.6E-09 1.6E-13 96.3 7.9 99 78-266 14-123 (158)
148 3mkr_A Coatomer subunit epsilo 98.8 7.4E-08 2.5E-12 94.4 15.7 170 66-313 65-237 (291)
149 1na0_A Designed protein CTPR3; 98.8 7.5E-08 2.6E-12 77.9 13.0 84 207-305 23-106 (125)
150 2vyi_A SGTA protein; chaperone 98.8 8.6E-08 2.9E-12 78.2 13.2 84 207-305 26-109 (131)
151 3k9i_A BH0479 protein; putativ 98.8 9.2E-09 3.2E-13 86.1 7.3 88 207-306 4-91 (117)
152 1zu2_A Mitochondrial import re 98.8 3.3E-09 1.1E-13 97.3 4.4 83 216-306 18-121 (158)
153 1a17_A Serine/threonine protei 98.8 1.1E-07 3.7E-12 81.8 13.6 84 207-305 27-110 (166)
154 1hh8_A P67PHOX, NCF-2, neutrop 98.8 5.3E-08 1.8E-12 88.1 12.1 107 66-265 37-152 (213)
155 2kck_A TPR repeat; tetratricop 98.8 1.7E-08 5.7E-13 80.7 7.7 85 207-304 20-105 (112)
156 2dba_A Smooth muscle cell asso 98.8 5.6E-08 1.9E-12 81.9 11.1 88 207-306 42-129 (148)
157 1ihg_A Cyclophilin 40; ppiase 98.8 1.7E-07 5.9E-12 95.6 16.7 91 207-305 237-336 (370)
158 1hxi_A PEX5, peroxisome target 98.7 1.5E-08 5E-13 86.4 7.0 85 207-306 31-115 (121)
159 1elw_A TPR1-domain of HOP; HOP 98.7 1.2E-07 4.1E-12 76.1 12.1 84 207-305 18-101 (118)
160 2kat_A Uncharacterized protein 98.7 4.5E-08 1.5E-12 81.0 9.8 80 220-307 5-84 (115)
161 3rjv_A Putative SEL1 repeat pr 98.7 1.3E-07 4.3E-12 87.9 13.7 134 66-305 50-197 (212)
162 2ond_A Cleavage stimulation fa 98.7 1.5E-07 5E-12 91.9 14.6 81 217-305 151-232 (308)
163 3ma5_A Tetratricopeptide repea 98.7 4.3E-08 1.5E-12 80.4 8.4 69 231-307 4-72 (100)
164 2kck_A TPR repeat; tetratricop 98.7 6.9E-08 2.4E-12 77.0 9.0 96 68-263 8-106 (112)
165 2c2l_A CHIP, carboxy terminus 98.7 1.1E-07 3.7E-12 92.5 11.5 86 207-307 18-103 (281)
166 4f3v_A ESX-1 secretion system 98.6 1.9E-07 6.7E-12 93.0 12.9 148 66-320 102-250 (282)
167 4f3v_A ESX-1 secretion system 98.6 2.2E-07 7.6E-12 92.5 13.3 176 64-303 5-198 (282)
168 3k9i_A BH0479 protein; putativ 98.6 1.1E-07 3.7E-12 79.4 8.5 90 78-264 2-91 (117)
169 2ond_A Cleavage stimulation fa 98.6 3.1E-07 1.1E-11 89.6 13.0 31 83-121 33-63 (308)
170 3urz_A Uncharacterized protein 98.6 1.5E-07 5E-12 86.9 9.8 86 207-307 18-119 (208)
171 2e2e_A Formate-dependent nitri 98.6 1E-06 3.4E-11 77.9 14.5 100 66-265 44-146 (177)
172 2l6j_A TPR repeat-containing p 98.6 1.3E-07 4.6E-12 76.2 7.8 65 233-305 3-67 (111)
173 2if4_A ATFKBP42; FKBP-like, al 98.6 1.6E-07 5.4E-12 94.2 9.5 93 207-307 193-295 (338)
174 2l6j_A TPR repeat-containing p 98.5 2.8E-08 9.5E-13 80.3 2.7 101 65-259 3-103 (111)
175 2xm6_A Protein corresponding t 98.5 1.4E-06 4.9E-11 90.2 16.4 166 66-305 39-216 (490)
176 2xm6_A Protein corresponding t 98.5 1.4E-06 4.6E-11 90.4 16.1 80 208-306 346-433 (490)
177 2fo7_A Synthetic consensus TPR 98.5 1.3E-06 4.4E-11 71.0 12.5 85 207-306 15-99 (136)
178 1na3_A Designed protein CTPR2; 98.5 4.9E-07 1.7E-11 70.4 9.1 67 231-305 6-72 (91)
179 1wao_1 Serine/threonine protei 98.4 6.1E-07 2.1E-11 94.4 9.6 86 206-306 19-104 (477)
180 2kat_A Uncharacterized protein 98.3 2.1E-06 7.2E-11 70.8 8.8 54 207-267 33-86 (115)
181 3e4b_A ALGK; tetratricopeptide 98.3 2.8E-06 9.7E-11 88.2 11.3 79 206-305 264-351 (452)
182 1klx_A Cysteine rich protein B 98.3 4.1E-06 1.4E-10 73.0 10.4 75 212-305 44-126 (138)
183 2ooe_A Cleavage stimulation fa 98.2 2.1E-05 7E-10 82.3 16.0 83 208-305 371-454 (530)
184 3e4b_A ALGK; tetratricopeptide 98.2 8.3E-06 2.8E-10 84.7 12.5 78 208-305 302-387 (452)
185 2ooe_A Cleavage stimulation fa 98.2 8.6E-06 2.9E-10 85.2 12.0 30 83-120 255-284 (530)
186 3ly7_A Transcriptional activat 98.2 4.3E-05 1.5E-09 78.8 16.9 141 66-305 196-339 (372)
187 2kc7_A BFR218_protein; tetratr 98.2 3.5E-06 1.2E-10 67.3 6.9 61 237-305 3-64 (99)
188 2v5f_A Prolyl 4-hydroxylase su 98.2 9.8E-06 3.4E-10 67.4 9.9 72 234-306 5-76 (104)
189 1na3_A Designed protein CTPR2; 98.1 3E-05 1E-09 60.0 11.8 49 65-121 8-56 (91)
190 3qou_A Protein YBBN; thioredox 98.1 1.1E-05 3.8E-10 78.3 11.3 91 207-305 131-248 (287)
191 1xi4_A Clathrin heavy chain; a 98.1 2.9E-05 9.9E-10 91.5 15.7 84 205-305 1146-1250(1630)
192 2r5s_A Uncharacterized protein 98.0 3.8E-06 1.3E-10 74.9 5.1 89 217-305 23-137 (176)
193 3ma5_A Tetratricopeptide repea 97.9 8.8E-05 3E-09 60.3 11.2 48 66-121 7-54 (100)
194 2kc7_A BFR218_protein; tetratr 97.9 2.5E-05 8.7E-10 62.1 7.8 45 69-121 3-48 (99)
195 1pc2_A Mitochondria fission pr 97.9 6.2E-05 2.1E-09 68.5 10.8 87 214-307 12-102 (152)
196 3u64_A Protein TP_0956; tetrat 97.9 0.00031 1.1E-08 70.3 16.5 88 206-305 176-269 (301)
197 1xi4_A Clathrin heavy chain; a 97.8 0.00027 9.3E-09 83.4 16.8 87 233-320 1133-1244(1630)
198 1dce_A Protein (RAB geranylger 97.8 0.00013 4.5E-09 78.7 13.4 149 59-305 21-173 (567)
199 3dra_A Protein farnesyltransfe 97.7 0.00044 1.5E-08 69.2 14.8 135 66-306 32-176 (306)
200 2v5f_A Prolyl 4-hydroxylase su 97.6 0.00035 1.2E-08 57.8 10.5 69 207-283 19-87 (104)
201 1dce_A Protein (RAB geranylger 97.6 0.00024 8.1E-09 76.7 10.9 135 66-306 63-222 (567)
202 1b89_A Protein (clathrin heavy 97.6 2.8E-05 9.6E-10 82.0 3.2 55 235-305 123-177 (449)
203 3ffl_A Anaphase-promoting comp 97.5 0.0006 2E-08 62.8 11.1 95 207-301 34-147 (167)
204 3dra_A Protein farnesyltransfe 97.4 0.002 7E-08 64.3 14.5 140 66-306 67-216 (306)
205 3dss_A Geranylgeranyl transfer 97.4 0.0027 9.3E-08 64.3 14.8 141 67-305 30-174 (331)
206 3bee_A Putative YFRE protein; 97.3 0.00032 1.1E-08 57.7 6.3 66 231-304 3-71 (93)
207 1klx_A Cysteine rich protein B 97.1 0.00093 3.2E-08 57.9 7.3 78 207-305 9-90 (138)
208 1b89_A Protein (clathrin heavy 97.1 0.00081 2.8E-08 71.0 7.4 63 237-307 210-274 (449)
209 3bee_A Putative YFRE protein; 97.1 0.0038 1.3E-07 51.2 10.0 48 210-264 26-73 (93)
210 1nzn_A CGI-135 protein, fissio 96.9 0.011 3.9E-07 51.9 12.1 103 211-317 12-117 (126)
211 3mv2_B Coatomer subunit epsilo 96.8 0.011 3.8E-07 59.4 12.7 138 68-306 102-241 (310)
212 3q7a_A Farnesyltransferase alp 96.8 0.0059 2E-07 62.3 10.8 126 74-306 61-197 (349)
213 3q7a_A Farnesyltransferase alp 96.7 0.016 5.4E-07 59.2 13.2 136 66-307 88-239 (349)
214 3dss_A Geranylgeranyl transfer 96.6 0.019 6.5E-07 58.1 12.8 134 68-307 66-224 (331)
215 1pc2_A Mitochondria fission pr 96.3 0.021 7.2E-07 51.7 10.1 55 207-266 49-103 (152)
216 3ffl_A Anaphase-promoting comp 96.1 0.11 3.8E-06 47.7 14.1 107 67-258 21-146 (167)
217 3mv2_B Coatomer subunit epsilo 95.6 0.29 1E-05 49.0 15.8 87 208-304 193-281 (310)
218 3txn_A 26S proteasome regulato 95.5 0.11 3.7E-06 53.8 12.8 100 205-306 111-211 (394)
219 4b4t_P 26S proteasome regulato 95.3 0.8 2.7E-05 47.7 18.5 117 63-267 134-251 (445)
220 3o48_A Mitochondria fission 1 95.3 0.067 2.3E-06 47.4 8.6 87 214-305 21-107 (134)
221 1y8m_A FIS1; mitochondria, unk 95.0 0.13 4.5E-06 46.1 9.8 86 215-305 21-106 (144)
222 3u64_A Protein TP_0956; tetrat 94.8 0.15 5.3E-06 50.9 10.9 64 207-279 218-283 (301)
223 2ff4_A Probable regulatory pro 94.3 0.44 1.5E-05 48.6 13.4 69 234-310 171-239 (388)
224 4e6h_A MRNA 3'-END-processing 94.1 0.56 1.9E-05 51.7 14.4 94 207-307 392-501 (679)
225 4e6h_A MRNA 3'-END-processing 93.9 0.47 1.6E-05 52.3 13.3 85 209-307 450-535 (679)
226 3txn_A 26S proteasome regulato 93.4 3 0.0001 43.0 17.5 131 71-291 104-235 (394)
227 4b4t_S RPN3, 26S proteasome re 93.1 0.29 9.8E-06 52.5 9.5 68 231-304 228-298 (523)
228 1ya0_A SMG-7 transcript varian 93.0 0.17 5.8E-06 53.9 7.6 64 234-305 152-215 (497)
229 4b4t_R RPN7, 26S proteasome re 91.4 0.71 2.4E-05 47.7 9.8 95 204-304 142-236 (429)
230 4h7y_A Dual specificity protei 91.3 0.4 1.4E-05 43.6 6.7 83 231-322 58-140 (161)
231 2cpt_A SKD1 protein, vacuolar 91.1 1.1 3.7E-05 38.6 9.0 61 61-121 13-75 (117)
232 1o9d_A 14-3-3-like protein C; 90.8 0.98 3.3E-05 44.2 9.5 73 233-305 131-207 (260)
233 1nzn_A CGI-135 protein, fissio 90.4 1.8 6.1E-05 37.8 9.9 59 207-265 37-105 (126)
234 3ly7_A Transcriptional activat 90.0 0.44 1.5E-05 48.9 6.6 88 217-306 216-307 (372)
235 2o8p_A 14-3-3 domain containin 89.9 1.6 5.6E-05 41.8 10.0 72 233-306 126-198 (227)
236 3iqu_A 14-3-3 protein sigma; s 89.9 1.2 4.1E-05 43.0 9.1 72 233-304 129-204 (236)
237 4b4t_R RPN7, 26S proteasome re 89.5 0.53 1.8E-05 48.7 6.8 87 215-306 112-198 (429)
238 2v6x_A Vacuolar protein sortin 89.2 2.1 7.1E-05 34.3 8.8 61 61-121 8-69 (85)
239 2w2u_A Hypothetical P60 katani 89.2 1.7 6E-05 35.0 8.3 52 61-112 14-66 (83)
240 4b4t_P 26S proteasome regulato 89.0 1.4 4.7E-05 45.9 9.6 100 204-306 148-248 (445)
241 1wfd_A Hypothetical protein 15 88.8 2.6 8.9E-05 34.6 9.3 59 61-119 10-69 (93)
242 2v6y_A AAA family ATPase, P60 88.7 1.9 6.7E-05 34.6 8.3 60 62-121 7-67 (83)
243 2br9_A 14-3-3E, 14-3-3 protein 88.3 1.8 6.2E-05 41.6 9.1 72 233-304 126-201 (234)
244 4a5x_A MITD1, MIT domain-conta 87.7 3.1 0.00011 33.7 8.9 57 64-120 14-71 (86)
245 3uzd_A 14-3-3 protein gamma; s 87.0 1.7 5.9E-05 42.2 8.1 72 233-304 127-202 (248)
246 3c3r_A Programmed cell death 6 86.9 3.1 0.00011 42.5 10.6 58 253-310 241-309 (380)
247 2vkj_A TM1634; membrane protei 86.8 3.2 0.00011 34.4 8.3 52 64-121 51-103 (106)
248 4gns_B Protein CSD3, chitin bi 86.4 6.6 0.00022 43.9 13.5 59 233-299 336-394 (754)
249 2crb_A Nuclear receptor bindin 86.1 7.7 0.00026 32.2 10.3 40 230-269 11-50 (97)
250 3r9m_A BRO1 domain-containing 85.5 7.6 0.00026 39.5 12.5 39 274-312 251-289 (376)
251 2xs1_A Programmed cell death 6 85.2 3.5 0.00012 45.5 10.6 56 253-308 226-292 (704)
252 3mkq_B Coatomer subunit alpha; 85.0 1.9 6.4E-05 39.8 6.9 54 207-265 10-65 (177)
253 2npm_A 14-3-3 domain containin 84.9 2.9 0.0001 40.8 8.6 71 233-304 152-226 (260)
254 2crb_A Nuclear receptor bindin 84.8 1.9 6.7E-05 35.7 6.2 41 61-101 10-50 (97)
255 4g26_A Pentatricopeptide repea 84.8 17 0.00058 38.1 15.2 84 207-303 119-202 (501)
256 3o48_A Mitochondria fission 1 84.0 3.5 0.00012 36.3 8.0 58 207-264 42-108 (134)
257 1zb1_A BRO1 protein; AIP1, BRO 83.8 5.4 0.00018 40.8 10.6 58 252-309 217-290 (392)
258 3ubw_A 14-3-3E, 14-3-3 protein 83.5 3.1 0.00011 40.6 8.1 72 233-304 152-227 (261)
259 1y8m_A FIS1; mitochondria, unk 83.3 6.6 0.00023 35.0 9.5 59 206-264 40-107 (144)
260 3mkq_A Coatomer beta'-subunit; 80.8 2.8 9.4E-05 45.0 7.4 82 208-299 658-746 (814)
261 3efz_A 14-3-3 protein; 14-3-3, 80.3 3.3 0.00011 40.6 7.0 71 234-304 149-225 (268)
262 2v6x_A Vacuolar protein sortin 80.2 12 0.00043 29.6 9.4 37 275-311 12-48 (85)
263 2wpv_A GET4, UPF0363 protein Y 80.0 50 0.0017 32.8 17.9 87 215-301 115-213 (312)
264 2cpt_A SKD1 protein, vacuolar 79.1 15 0.00053 31.3 10.1 23 246-268 30-52 (117)
265 3rau_A Tyrosine-protein phosph 79.1 40 0.0014 34.0 15.0 37 274-310 250-286 (363)
266 1wfd_A Hypothetical protein 15 78.6 12 0.0004 30.6 8.9 37 275-311 14-50 (93)
267 4b4t_O 26S proteasome regulato 77.8 16 0.00056 37.1 11.7 99 207-305 90-198 (393)
268 2uy1_A Cleavage stimulation fa 77.8 39 0.0013 35.1 14.9 50 63-121 11-60 (493)
269 4a5x_A MITD1, MIT domain-conta 77.2 9.5 0.00032 30.8 7.8 37 275-311 15-51 (86)
270 1deq_A Fibrinogen (alpha chain 76.6 27 0.00094 35.7 12.6 48 248-295 63-110 (390)
271 2uy1_A Cleavage stimulation fa 75.9 47 0.0016 34.4 14.9 77 217-302 303-380 (493)
272 2v6y_A AAA family ATPase, P60 74.9 5.1 0.00018 32.1 5.6 36 276-311 11-46 (83)
273 2w2u_A Hypothetical P60 katani 74.4 6.2 0.00021 31.7 5.9 37 275-311 18-54 (83)
274 2dl1_A Spartin; SPG20, MIT, st 73.5 17 0.00057 31.3 8.6 78 276-378 22-99 (116)
275 1fxk_C Protein (prefoldin); ar 70.2 1.3 4.4E-05 38.4 1.0 73 242-314 19-108 (133)
276 3mkq_A Coatomer beta'-subunit; 69.4 71 0.0024 33.9 14.7 21 237-257 726-746 (814)
277 3re2_A Predicted protein; meni 69.3 11 0.00039 38.6 7.7 71 233-306 254-326 (472)
278 4g26_A Pentatricopeptide repea 66.4 21 0.00073 37.3 9.6 83 207-302 84-166 (501)
279 3na7_A HP0958; flagellar bioge 65.8 93 0.0032 29.5 13.5 28 293-320 89-116 (256)
280 2rpa_A Katanin P60 ATPase-cont 65.8 9 0.00031 30.6 5.0 35 279-313 15-49 (78)
281 2akf_A Coronin-1A; coiled coil 65.4 8.1 0.00028 25.2 3.7 27 351-377 3-29 (32)
282 3esl_A Checkpoint serine/threo 62.7 9.7 0.00033 35.8 5.4 95 214-315 58-154 (202)
283 4gq4_A Menin; tumor suppressor 61.6 24 0.00082 36.8 8.5 85 217-306 247-333 (489)
284 2wvi_A Mitotic checkpoint seri 60.3 12 0.00042 33.9 5.5 89 214-315 44-135 (164)
285 2rpa_A Katanin P60 ATPase-cont 60.1 9 0.00031 30.6 4.0 33 236-268 14-46 (78)
286 3ax2_A Mitochondrial import re 58.8 23 0.00079 27.9 6.1 31 65-95 16-46 (73)
287 4a1g_A Mitotic checkpoint seri 58.8 12 0.00041 33.6 5.1 90 214-316 49-141 (152)
288 2dl1_A Spartin; SPG20, MIT, st 58.1 37 0.0012 29.1 7.8 75 234-318 22-99 (116)
289 2ymb_A MITD1, MIT domain-conta 57.5 2.2 7.4E-05 41.7 0.0 61 61-121 18-79 (257)
290 4h7y_A Dual specificity protei 56.3 21 0.00073 32.3 6.3 50 208-264 75-124 (161)
291 4aez_C MAD3, mitotic spindle c 52.5 13 0.00045 35.4 4.5 80 214-306 98-180 (223)
292 3u84_A Menin; MLL, JUND, ledgf 52.1 25 0.00084 36.8 6.7 71 233-306 276-348 (550)
293 4gns_B Protein CSD3, chitin bi 50.6 12 0.00042 41.7 4.6 54 68-129 339-392 (754)
294 2xze_A STAM-binding protein; h 50.4 65 0.0022 28.3 8.5 42 232-274 38-79 (146)
295 2lw1_A ABC transporter ATP-bin 49.9 18 0.00063 29.1 4.4 32 350-381 18-49 (89)
296 1om2_A Protein (mitochondrial 49.9 35 0.0012 28.2 6.2 32 64-95 18-49 (95)
297 2ff4_A Probable regulatory pro 48.2 1.4E+02 0.0048 29.8 11.8 48 66-121 171-218 (388)
298 3lpz_A GET4 (YOR164C homolog); 48.1 2.2E+02 0.0077 28.4 19.7 87 215-301 117-212 (336)
299 3kae_A CDC27, possible protein 47.7 1.4E+02 0.0049 27.8 10.4 72 232-305 60-143 (242)
300 1ya0_A SMG-7 transcript varian 47.4 23 0.00079 37.4 5.9 48 66-121 152-199 (497)
301 3myv_A SUSD superfamily protei 47.1 22 0.00074 36.7 5.6 56 250-305 164-219 (454)
302 2wb7_A PT26-6P; extra chromoso 45.4 35 0.0012 36.3 6.7 43 250-292 448-490 (526)
303 2l5g_B Putative uncharacterize 44.8 36 0.0012 24.0 4.5 30 349-378 11-40 (42)
304 3mq7_A Bone marrow stromal ant 44.8 57 0.002 27.9 6.7 28 349-376 73-100 (121)
305 1om2_A Protein (mitochondrial 44.0 25 0.00084 29.1 4.3 28 238-265 24-51 (95)
306 3spa_A Mtrpol, DNA-directed RN 44.0 98 0.0033 36.1 10.6 87 207-303 141-228 (1134)
307 3kez_A Putative sugar binding 43.2 22 0.00076 36.7 4.9 56 250-305 170-225 (461)
308 3mq9_A Bone marrow stromal ant 41.8 2.9E+02 0.0098 28.0 13.2 26 351-376 440-465 (471)
309 1m1j_A Fibrinogen alpha subuni 40.1 1.5E+02 0.0051 31.1 10.3 20 355-374 133-152 (491)
310 3iqc_A FLIS, flagellar protein 38.5 1.3E+02 0.0045 25.8 8.4 44 63-106 33-76 (131)
311 1fxk_C Protein (prefoldin); ar 38.5 99 0.0034 26.1 7.6 22 299-320 86-107 (133)
312 3ax2_A Mitochondrial import re 38.4 23 0.0008 27.8 3.2 28 237-264 20-47 (73)
313 3mcx_A SUSD superfamily protei 38.3 25 0.00086 36.3 4.4 55 250-304 176-230 (477)
314 4fm3_A Uncharacterized hypothe 37.4 99 0.0034 25.7 7.0 32 231-262 31-62 (98)
315 4b4t_O 26S proteasome regulato 36.0 3.4E+02 0.012 27.1 14.8 58 207-264 141-199 (393)
316 2xze_A STAM-binding protein; h 35.9 50 0.0017 29.1 5.4 45 61-106 35-79 (146)
317 3mkq_B Coatomer subunit alpha; 35.7 54 0.0018 29.9 5.7 55 243-310 14-68 (177)
318 4fhn_B Nucleoporin NUP120; pro 35.3 60 0.002 37.5 7.3 70 237-306 845-929 (1139)
319 3spa_A Mtrpol, DNA-directed RN 35.1 73 0.0025 37.1 7.8 67 232-302 125-191 (1134)
320 3snx_A SUSD homolog, putative 35.0 43 0.0015 34.6 5.6 55 251-305 161-220 (460)
321 3trt_A Vimentin; cytoskeleton, 33.8 1.6E+02 0.0054 22.5 8.0 26 349-374 51-76 (77)
322 1dip_A Delta-sleep-inducing pe 33.6 72 0.0025 25.2 5.2 36 350-393 11-46 (78)
323 3eab_A Spastin; spastin, MIT, 33.2 45 0.0015 27.3 4.2 33 275-307 15-50 (89)
324 1vh6_A Flagellar protein FLIS; 32.8 1.2E+02 0.0041 26.6 7.3 58 63-120 30-93 (145)
325 2zan_A Vacuolar protein sortin 32.3 9.5 0.00032 39.3 0.0 51 62-112 7-59 (444)
326 4abx_A DNA repair protein RECN 32.2 88 0.003 27.9 6.5 97 253-375 68-164 (175)
327 3lew_A SUSD-like carbohydrate 32.0 57 0.002 33.9 6.0 56 250-305 174-232 (495)
328 4fhn_B Nucleoporin NUP120; pro 31.5 2.2E+02 0.0076 32.7 11.3 63 233-299 898-961 (1139)
329 4gq2_M Nucleoporin NUP120; bet 31.2 56 0.0019 37.1 6.1 67 238-304 844-925 (950)
330 2zqm_A Prefoldin beta subunit 31.2 44 0.0015 27.5 4.0 97 232-366 14-110 (117)
331 1lq7_A Alpha3W; three helix bu 30.7 71 0.0024 23.7 4.5 19 355-373 26-44 (67)
332 2zdi_C Prefoldin subunit alpha 29.5 1.3E+02 0.0046 26.1 7.1 23 291-313 95-117 (151)
333 2oo2_A Hypothetical protein AF 29.4 76 0.0026 25.7 4.9 32 60-91 29-60 (86)
334 4abx_A DNA repair protein RECN 28.5 99 0.0034 27.6 6.2 75 212-293 68-142 (175)
335 2pmr_A Uncharacterized protein 28.3 80 0.0027 25.6 4.9 35 59-93 32-66 (87)
336 2wq1_A General control protein 28.1 28 0.00095 23.3 1.7 15 350-364 17-31 (33)
337 1deq_A Fibrinogen (alpha chain 28.1 5E+02 0.017 26.5 12.2 98 206-320 62-160 (390)
338 1zb1_A BRO1 protein; AIP1, BRO 26.7 1.5E+02 0.0053 29.8 7.9 63 216-287 120-190 (392)
339 1o3u_A Conserved hypothetical 26.6 1.2E+02 0.0039 25.8 6.0 37 62-98 12-48 (135)
340 2yy0_A C-MYC-binding protein; 26.5 95 0.0032 22.7 4.6 29 348-376 20-48 (53)
341 3t5x_A PCI domain-containing p 25.9 60 0.0021 29.9 4.3 33 274-306 12-44 (203)
342 1wol_A ST0689, 122AA long cons 25.7 1.3E+02 0.0044 24.8 6.0 38 61-98 6-43 (122)
343 2cfu_A SDSA1; SDS-hydrolase, l 25.5 1.3E+02 0.0044 32.6 7.5 51 66-124 449-499 (658)
344 2rkl_A Vacuolar protein sortin 25.5 1.4E+02 0.0049 22.0 5.3 37 61-97 15-51 (53)
345 1orj_A Flagellar protein FLIS; 25.3 1.2E+02 0.0042 26.1 5.9 44 63-106 26-73 (130)
346 1m1j_B Fibrinogen beta chain; 25.2 2.7E+02 0.0091 29.2 9.5 25 352-376 166-190 (464)
347 3hdx_A SUSD homolog, SUSD supe 24.4 86 0.0029 32.3 5.6 30 275-304 196-225 (478)
348 3c3g_A Alpha/beta peptide with 24.2 48 0.0017 22.1 2.3 16 350-365 17-32 (33)
349 4b6x_A AVRRPS4, avirulence pro 24.1 1.6E+02 0.0053 23.7 5.7 33 350-383 25-57 (90)
350 2rkl_A Vacuolar protein sortin 23.9 1.3E+02 0.0046 22.1 4.9 34 233-266 19-52 (53)
351 2k48_A Nucleoprotein; viral pr 23.6 3.3E+02 0.011 22.8 8.2 26 353-378 74-99 (107)
352 2p32_A Heat shock 70 kDa prote 23.5 3.1E+02 0.011 22.6 8.7 29 348-376 47-83 (120)
353 2zdi_C Prefoldin subunit alpha 23.5 1.5E+02 0.0051 25.8 6.2 23 298-320 95-117 (151)
354 1fxk_A Prefoldin; archaeal pro 23.2 76 0.0026 25.6 4.0 73 237-315 14-86 (107)
355 1ufb_A TT1696 protein; structu 23.1 1.3E+02 0.0046 24.8 5.7 37 61-97 6-42 (127)
356 2wm9_A Dedicator of cytokinesi 23.0 2.4E+02 0.0082 28.9 8.7 74 235-308 12-120 (428)
357 3t5v_B Nuclear mRNA export pro 22.9 1E+02 0.0036 32.1 5.9 71 235-307 177-252 (455)
358 2jpu_A ORF C02003 protein; sol 22.9 80 0.0028 27.4 4.2 37 63-99 4-40 (129)
359 3ghg_A Fibrinogen alpha chain; 22.5 7.2E+02 0.025 26.5 12.0 12 364-375 179-190 (562)
360 3ghg_A Fibrinogen alpha chain; 22.5 3.9E+02 0.013 28.5 10.0 31 287-317 110-140 (562)
361 2e2a_A Protein (enzyme IIA); h 22.3 1.6E+02 0.0055 24.5 5.8 35 65-99 19-53 (105)
362 2wpv_A GET4, UPF0363 protein Y 22.3 5.6E+02 0.019 25.1 16.0 44 254-300 113-158 (312)
363 3c3f_A Alpha/beta peptide with 22.1 56 0.0019 21.9 2.3 15 350-364 18-32 (34)
364 1kd8_B GABH BLL, GCN4 acid bas 22.0 87 0.003 21.3 3.2 16 350-365 18-33 (36)
365 2hsb_A Hypothetical UPF0332 pr 22.0 1.7E+02 0.006 23.9 6.2 36 61-96 7-42 (126)
366 1wcr_A PTS system, N, N'-diace 21.9 1.7E+02 0.0057 24.4 5.8 35 65-99 17-51 (103)
367 4ady_A RPN2, 26S proteasome re 21.7 6.2E+02 0.021 29.0 12.2 60 214-289 216-275 (963)
368 3f6n_A Virion-associated prote 21.5 1E+02 0.0034 26.6 4.4 23 351-373 6-28 (129)
369 2xdj_A Uncharacterized protein 21.1 3.2E+02 0.011 21.8 8.7 28 350-377 30-57 (83)
370 4fx5_A VON willebrand factor t 21.1 1.3E+02 0.0044 31.2 6.1 38 62-99 378-415 (464)
371 1wy6_A Hypothetical protein ST 21.0 1E+02 0.0035 27.7 4.5 30 275-304 124-153 (172)
372 3mv2_A Coatomer subunit alpha; 20.9 2.6E+02 0.0089 27.9 8.0 49 62-110 110-158 (325)
373 2pjw_V Vacuolar protein sortin 20.8 1.8E+02 0.0063 23.6 5.7 54 249-306 31-84 (91)
374 3jq1_A SUSD superfamily protei 20.8 65 0.0022 33.4 3.8 28 276-303 180-207 (481)
375 3fse_A Two-domain protein cont 20.4 3.3E+02 0.011 27.4 8.8 89 294-391 240-333 (365)
376 3hh0_A Transcriptional regulat 20.2 1E+02 0.0035 26.8 4.5 44 350-393 90-133 (146)
377 2ymb_A MITD1, MIT domain-conta 20.2 22 0.00074 34.6 0.0 39 273-311 20-58 (257)
378 2a9u_A Ubiquitin carboxyl-term 20.2 4.4E+02 0.015 23.0 9.3 42 232-275 40-81 (144)
379 3eab_A Spastin; spastin, MIT, 20.1 2.7E+02 0.0093 22.6 6.6 34 233-266 15-51 (89)
380 3k1s_A PTS system, cellobiose- 20.0 1.9E+02 0.0064 24.3 5.8 35 65-99 21-55 (109)
381 3hdx_A SUSD homolog, SUSD supe 20.0 4.3E+02 0.015 26.9 9.9 34 230-263 193-226 (478)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.80 E-value=1.1e-18 Score=186.43 Aligned_cols=157 Identities=15% Similarity=0.026 Sum_probs=148.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCC
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~ 141 (479)
.+..+..+++....+..+|+|++|..+|.++|+++..++|+.||.++.+|+++|.+|..+
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~-------------------- 364 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYL-------------------- 364 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh--------------------
Confidence 355688888999999999999999999999999999999999999999999999999875
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~ 221 (479)
++|+.|..+++.++.
T Consensus 365 -----------------------------------------------------------------g~~~eA~~~~~~aL~ 379 (490)
T 3n71_A 365 -----------------------------------------------------------------QAYEEASHYARRMVD 379 (490)
T ss_dssp -----------------------------------------------------------------TCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------cCHHHHHHHHHHHHH
Confidence 568889999999999
Q ss_pred HHHHhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHH
Q 011692 222 IAEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 300 (479)
Q Consensus 222 Iyek~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~e 300 (479)
|+++.++ .|+.++.+|++||.+|..+|+|++|+..|++||+|++..+|++||.+++++.+|+.++..+++|++|...|+
T Consensus 380 i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~ 459 (490)
T 3n71_A 380 GYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYH 459 (490)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 011692 301 KAI 303 (479)
Q Consensus 301 kAL 303 (479)
++.
T Consensus 460 ~~~ 462 (490)
T 3n71_A 460 KMR 462 (490)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 2
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.75 E-value=1.7e-16 Score=147.77 Aligned_cols=160 Identities=20% Similarity=0.186 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..+..+|..++.+|+|++|+.+|.+++++....+|..+|..+.+|+++|.+++..
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------------- 98 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR---------------------- 98 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHh----------------------
Confidence 3467788999999999999999999999999999999999999999999999999764
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|.++|+.++.++
T Consensus 99 ---------------------------------------------------------------g~~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 99 ---------------------------------------------------------------GKYKEAEPLCKRALEIR 115 (283)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ccHHHHHHHHHHHHHHH
Confidence 46788999999999999
Q ss_pred HHhcCC-cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 224 EKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 224 ek~~~~-~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
.+..+. ++..+.+|.+||.++..+|+|++|+..|++++.+.+...+++++..+.++++||.+|..+|++++|+.+|+++
T Consensus 116 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 195 (283)
T 3edt_B 116 EKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEI 195 (283)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 887554 4788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 011692 303 ISVCKS 308 (479)
Q Consensus 303 L~I~k~ 308 (479)
+.+...
T Consensus 196 l~~~~~ 201 (283)
T 3edt_B 196 LTRAHE 201 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998654
No 3
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.69 E-value=3.9e-15 Score=141.12 Aligned_cols=160 Identities=20% Similarity=0.145 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..+..+|..++..|+|++|+.+|.+++++.....|..++..+.+|+.+|.+++..
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~---------------------- 82 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQ---------------------- 82 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC----------------------
Confidence 4577899999999999999999999999999999999999999999999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|..+|+.++.++
T Consensus 83 ---------------------------------------------------------------g~~~~A~~~~~~al~~~ 99 (311)
T 3nf1_A 83 ---------------------------------------------------------------NKYKDAANLLNDALAIR 99 (311)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHHHH
Confidence 46778999999999998
Q ss_pred HHhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 224 EKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 224 ek~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
.+..+ ..+..+.+|..||.++...|+|++|+..|++++.+.+..++.+++..+.++++||.+|...|++++|+.+|+++
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 179 (311)
T 3nf1_A 100 EKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRA 179 (311)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 87743 34678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 011692 303 ISVCKS 308 (479)
Q Consensus 303 L~I~k~ 308 (479)
+.+++.
T Consensus 180 ~~~~~~ 185 (311)
T 3nf1_A 180 LEIYQT 185 (311)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998543
No 4
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.68 E-value=3e-15 Score=139.23 Aligned_cols=158 Identities=18% Similarity=0.087 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..+..+|..++.+|+|++|+.+|.+++.+..+.+|..+|..+.+|+++|.+++..
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~---------------------- 140 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQ---------------------- 140 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT----------------------
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHc----------------------
Confidence 3467889999999999999999999999999999999999999999999999999864
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|+++|+.++.++
T Consensus 141 ---------------------------------------------------------------g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 141 ---------------------------------------------------------------GKAEEVEYYYRRALEIY 157 (283)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHHHH
Confidence 46788999999999999
Q ss_pred HHhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh-----------------------------------
Q 011692 224 EKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM----------------------------------- 267 (479)
Q Consensus 224 ek~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~l----------------------------------- 267 (479)
.+..+ ..+..+.+|..||.++..+|+|++|+..|++++.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T 3edt_B 158 ATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEY 237 (283)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC-------
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 88754 357789999999999999999999999999999985542
Q ss_pred ------cCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 268 ------VEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 268 ------lg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
++.+++..+.++++||.+|..+|++++|+.+|++++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 238 GSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp -----CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 234678999999999999999999999999999999764
No 5
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.67 E-value=8.8e-16 Score=161.52 Aligned_cols=136 Identities=21% Similarity=0.172 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCC
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~ 142 (479)
+..+..++..+.+....|+|++|..+|.++|+++.+++|+.||.++.+|.++|.+|..+
T Consensus 295 ~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~--------------------- 353 (433)
T 3qww_A 295 VRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYM--------------------- 353 (433)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhh---------------------
Confidence 34566777888888889999999999999999999999999999999999999999765
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
++|+.|..+++.++.|
T Consensus 354 ----------------------------------------------------------------g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 354 ----------------------------------------------------------------QDWEGALKYGQKIIKP 369 (433)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------cCHHHHHHHHHHHHHH
Confidence 5688899999999999
Q ss_pred HHHhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 223 AEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 223 yek~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
+++.++ .|+.++..|++||.+|..+|+|++|+..|++||+|++..+|++||.+++++.+|.
T Consensus 370 ~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 370 YSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 999987 5899999999999999999999999999999999999999999999999988874
No 6
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.67 E-value=6.6e-15 Score=139.54 Aligned_cols=159 Identities=20% Similarity=0.190 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..+..+|..++..|+|++|+.+|.+++++....+|..++..+.+|+.+|.+++..
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------------------- 124 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR----------------------- 124 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT-----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHc-----------------------
Confidence 356688899999999999999999999999999999999999999999999999764
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|.++|+.++.++.
T Consensus 125 --------------------------------------------------------------g~~~~A~~~~~~a~~~~~ 142 (311)
T 3nf1_A 125 --------------------------------------------------------------GKYKEAEPLCKRALEIRE 142 (311)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CcHHHHHHHHHHHHHHHH
Confidence 467889999999999987
Q ss_pred HhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 225 KHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 225 k~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
+..+ ..+..+.++..||.++...|+|++|+..|++++.+.+...+.+++..+.++++||.+|...|++++|+.+|++++
T Consensus 143 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 143 KVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEIL 222 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 7633 356789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 011692 304 SVCKS 308 (479)
Q Consensus 304 ~I~k~ 308 (479)
.+...
T Consensus 223 ~~~~~ 227 (311)
T 3nf1_A 223 TRAHE 227 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98655
No 7
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.65 E-value=2.6e-15 Score=134.19 Aligned_cols=169 Identities=18% Similarity=0.170 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++++|..++.+|+|++|+.+|.+|+++ +|..+.+|+.+|.+++.+++.+..+--. ..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~a~~~~--~~---------- 64 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKA--------DPNNVETLLKLGKTYMDIGLPNDAIESL--KK---------- 64 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH--HH----------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCCCHHHHHHHH--HH----------
Confidence 567899999999999999999999999998 8999999999999999986543221000 00
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
.. ...+... ... . ..+......++++.|.+.+..+..+
T Consensus 65 ---~~-~~~~~~~------~~~--------~---------------------~~~~~~~~~~~~~~a~~~~~~a~~~--- 102 (184)
T 3vtx_A 65 ---FV-VLDTTSA------EAY--------Y---------------------ILGSANFMIDEKQAAIDALQRAIAL--- 102 (184)
T ss_dssp ---HH-HHCCCCH------HHH--------H---------------------HHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred ---HH-hcCchhH------HHH--------H---------------------HHHHHHHHcCCHHHHHHHHHHHHHh---
Confidence 00 0000000 000 0 0000001224566666666666544
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.+....++..||.++..+|+|++|+..|++++++. |..+.+|++||.+|..+|++++|+.+|++||++
T Consensus 103 ----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 103 ----NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK--------PGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ----CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc--------chhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 34457899999999999999999999999999884 333689999999999999999999999999987
Q ss_pred HHH
Q 011692 306 CKS 308 (479)
Q Consensus 306 ~k~ 308 (479)
-..
T Consensus 171 ~p~ 173 (184)
T 3vtx_A 171 EEK 173 (184)
T ss_dssp THH
T ss_pred Ccc
Confidence 554
No 8
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.64 E-value=5e-15 Score=148.31 Aligned_cols=150 Identities=21% Similarity=0.307 Sum_probs=133.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCcccc
Q 011692 70 MEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSV 149 (479)
Q Consensus 70 ~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~ 149 (479)
+-+|..++..|+|++|+.+|.+|+++.... ...+..+.+|+++|.+++..
T Consensus 107 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~---------------------------- 156 (383)
T 3ulq_A 107 FFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYM---------------------------- 156 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHT----------------------------
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHc----------------------------
Confidence 349999999999999999999999985543 34567999999999999875
Q ss_pred ccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCC
Q 011692 150 KNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGD 229 (479)
Q Consensus 150 ~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~ 229 (479)
++++.|...++.|+.++.+..+.
T Consensus 157 ---------------------------------------------------------~~~~~A~~~~~~al~~~~~~~~~ 179 (383)
T 3ulq_A 157 ---------------------------------------------------------KQTYFSMDYARQAYEIYKEHEAY 179 (383)
T ss_dssp ---------------------------------------------------------TCHHHHHHHHHHHHHHHHTCSTT
T ss_pred ---------------------------------------------------------CCHHHHHHHHHHHHHHHHhCccc
Confidence 46788999999999999988655
Q ss_pred cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 011692 230 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 230 ~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
.+..+.+|++||.++..+|+|++|+.+|++||.+.++. .+++.++.+|++||.+|..+|++++|+.+|++|+.+++.
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 67889999999999999999999999999999999987 478889999999999999999999999999999997654
No 9
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.63 E-value=3.3e-14 Score=120.66 Aligned_cols=154 Identities=13% Similarity=0.123 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..+..+|..++..|+|++|+.+|.+++++..... .....+.+|+.+|.+++..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~---------------------- 62 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--DKAAERIAYSNLGNAYIFL---------------------- 62 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHc----------------------
Confidence 4578899999999999999999999999999977642 2456778999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|...++.++.++
T Consensus 63 ---------------------------------------------------------------g~~~~A~~~~~~a~~~~ 79 (164)
T 3ro3_A 63 ---------------------------------------------------------------GEFETASEYYKKTLLLA 79 (164)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHHHH
Confidence 46788999999999998
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
.+.. .....+.++.+||.++..+|+|++|+..|++++.+.+... +++..+.++++||.+|...|++++|+.+|++++
T Consensus 80 ~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 80 RQLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYTALGNHDQAMHFAEKHL 156 (164)
T ss_dssp HHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHhC-CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcc--chHhHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 7763 3456789999999999999999999999999999988764 567789999999999999999999999999999
Q ss_pred HHHH
Q 011692 304 SVCK 307 (479)
Q Consensus 304 ~I~k 307 (479)
.+.+
T Consensus 157 ~~~~ 160 (164)
T 3ro3_A 157 EISR 160 (164)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8864
No 10
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.63 E-value=3.1e-15 Score=156.94 Aligned_cols=139 Identities=8% Similarity=-0.005 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..++..-..+..+|+|++|+.+|.++|+++..++|+.||.++.+|.++|.+|..+
T Consensus 286 ~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~----------------------- 342 (429)
T 3qwp_A 286 EVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINL----------------------- 342 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhh-----------------------
Confidence 456777777788899999999999999999999999999999999999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++|+.|..+++.++.||+
T Consensus 343 --------------------------------------------------------------g~~~eA~~~~~~~L~i~~ 360 (429)
T 3qwp_A 343 --------------------------------------------------------------GLLEEALFYGTRTMEPYR 360 (429)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhHH
Confidence 468889999999999999
Q ss_pred HhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc
Q 011692 225 KHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 288 (479)
Q Consensus 225 k~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~ 288 (479)
+.++ .|+.++..|++||.+|..+|+|++|+..|++||+|++..+|++||.+++++.+|+.|+..
T Consensus 361 ~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 361 IFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 9877 689999999999999999999999999999999999999999999999999999998753
No 11
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.63 E-value=3.8e-14 Score=127.12 Aligned_cols=155 Identities=17% Similarity=0.058 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..+..+|..++.+|+|++|+.+|.+++++.... | ..+..+.+|+++|.+++..
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~----------------------- 79 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS-G-DHTAEHRALHQVGMVERMA----------------------- 79 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-C-CHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc-C-CcHHHHHHHHHHHHHHHHc-----------------------
Confidence 47788999999999999999999999999987654 2 4678899999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|...++.|+.++.
T Consensus 80 --------------------------------------------------------------g~~~~A~~~~~~al~~~~ 97 (203)
T 3gw4_A 80 --------------------------------------------------------------GNWDAARRCFLEERELLA 97 (203)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 467889999999999998
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
+..+.....+.++.+||.++..+|+|++|+..|++++.+.+... +.+..+.++++||.+|...|++++|+.+|++++.
T Consensus 98 ~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 175 (203)
T 3gw4_A 98 SLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD--DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARD 175 (203)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 76544457899999999999999999999999999999987653 4566789999999999999999999999999999
Q ss_pred HHHH
Q 011692 305 VCKS 308 (479)
Q Consensus 305 I~k~ 308 (479)
+.+.
T Consensus 176 ~~~~ 179 (203)
T 3gw4_A 176 IFAE 179 (203)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.61 E-value=9.9e-15 Score=146.43 Aligned_cols=154 Identities=18% Similarity=0.131 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
.--++.+|..++..|+|++|+.+|.+|+.+.... ...+..+.+|+++|.+++..
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~------------------------ 154 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHM------------------------ 154 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhC--CChHHHHHHHHHHHHHHHHc------------------------
Confidence 4457789999999999999999999999986554 23588999999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
+++..|...++.|+.++.+
T Consensus 155 -------------------------------------------------------------~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 155 -------------------------------------------------------------KQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------------------------------------CCcHHHHHHHHHHHHHHHh
Confidence 4678899999999999998
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
........+.+|++||.++..+|+|++|+.+|++||.+.++. .+.+.++.+|++||.+|..+|++++|+.+|++|+.+
T Consensus 174 ~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 174 HPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKV 251 (378)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 765556789999999999999999999999999999999877 356688999999999999999999999999999997
Q ss_pred HHH
Q 011692 306 CKS 308 (479)
Q Consensus 306 ~k~ 308 (479)
++.
T Consensus 252 ~~~ 254 (378)
T 3q15_A 252 SRE 254 (378)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 13
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.60 E-value=6.8e-14 Score=140.07 Aligned_cols=156 Identities=13% Similarity=0.092 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..+..+|..++.+|+|++|+.+|.+|+++.... +...+..+.+|+++|.+++.+
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~---------------------- 197 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDL---------------------- 197 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHHHHHh----------------------
Confidence 467889999999999999999999999999997664 555788999999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|.+.|+.|+.++
T Consensus 198 ---------------------------------------------------------------g~~~~A~~~~~~al~~~ 214 (383)
T 3ulq_A 198 ---------------------------------------------------------------KQYEDAISHFQKAYSMA 214 (383)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------cCHHHHHHHHHHHHHHH
Confidence 46888999999999999
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
.+.. .....+.+|.+||.++..+|+|++|+.+|++||.+.+... +.+..+.++++||.+|..+|++++|+.+|++|+
T Consensus 215 ~~~~-~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 291 (383)
T 3ulq_A 215 EAEK-QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESN--ILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGM 291 (383)
T ss_dssp HHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHcC-ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc--cchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 8773 4567899999999999999999999999999999988764 226679999999999999999999999999999
Q ss_pred HHHHH
Q 011692 304 SVCKS 308 (479)
Q Consensus 304 ~I~k~ 308 (479)
.+.+.
T Consensus 292 ~~~~~ 296 (383)
T 3ulq_A 292 AYSQK 296 (383)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99753
No 14
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.58 E-value=5.3e-14 Score=136.66 Aligned_cols=100 Identities=18% Similarity=0.085 Sum_probs=90.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|.++|+.|+.++.+........+.+|.+||.+|..+|+|++|+.+|++||.+.+..- +...++.+|++||.+|
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~~ 246 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN--SMALIGQLYYQRGECL 246 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--BCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHH
Confidence 57889999999999999887566778899999999999999999999999999999998763 5677899999999999
Q ss_pred HcCCC-hhHHHHHHHHHHHHHHH
Q 011692 287 EIGSK-PQEAIPYCQKAISVCKS 308 (479)
Q Consensus 287 ~~~g~-~eeAi~~~ekAL~I~k~ 308 (479)
..+|+ +++|+.+|++|+.+++.
T Consensus 247 ~~~g~~~~~A~~~~~~Al~i~~~ 269 (293)
T 3u3w_A 247 RKLEYEEAEIEDAYKKASFFFDI 269 (293)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHHHHHHHH
Confidence 99995 69999999999998763
No 15
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.57 E-value=3.1e-14 Score=158.43 Aligned_cols=172 Identities=17% Similarity=0.206 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCC--CCCCCcCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQ 141 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG--~~~~~~~e~~~ 141 (479)
..+..|.++|..++.+|+|++|+.+|.+|+++ +|+.+.+|+++|.+|+.+++.+..+-- .+.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~------- 71 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR------- 71 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------
Confidence 45789999999999999999999999999999 899999999999999998765332110 0000
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~ 221 (479)
.++... .. . -+.+......++++.|.+.|+.|+.
T Consensus 72 -----------l~P~~~---------~a-----~---------------------~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 72 -----------ISPTFA---------DA-----Y---------------------SNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp -----------HCTTCH---------HH-----H---------------------HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----------hCCCCH---------HH-----H---------------------HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 000000 00 0 0000011223567777777776665
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHH
Q 011692 222 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 301 (479)
Q Consensus 222 Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ek 301 (479)
+ .+..+.+|++||.++..+|+|++|+.+|++||++.. ..+.+|++||.+|..++++++|+++|++
T Consensus 106 l-------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P--------~~~~a~~~L~~~l~~~g~~~~A~~~~~k 170 (723)
T 4gyw_A 106 I-------NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP--------DFPDAYCNLAHCLQIVCDWTDYDERMKK 170 (723)
T ss_dssp H-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS--------CCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred h-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CChHHHhhhhhHHHhcccHHHHHHHHHH
Confidence 4 456789999999999999999999999999999843 2368999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 011692 302 AISVCKSRVQ 311 (479)
Q Consensus 302 AL~I~k~rl~ 311 (479)
++++....+.
T Consensus 171 al~l~~~~~~ 180 (723)
T 4gyw_A 171 LVSIVADQLE 180 (723)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhChhHHh
Confidence 9999877654
No 16
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.57 E-value=1.1e-13 Score=135.03 Aligned_cols=151 Identities=15% Similarity=0.051 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..+...|..+..+|+|++|+++|.+|+++.... | ..+..+.+|+++|.+|..+
T Consensus 37 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~------------------------ 90 (292)
T 1qqe_A 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKA-G-NEDEAGNTYVEAYKCFKSG------------------------ 90 (292)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-C-CHHHHHHHHHHHHHHHHHC------------------------
Confidence 3344455678888999999999999999997654 4 3456789999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|..+|+.|+.|+.+
T Consensus 91 -------------------------------------------------------------g~~~~A~~~~~~Al~l~~~ 109 (292)
T 1qqe_A 91 -------------------------------------------------------------GNSVNAVDSLENAIQIFTH 109 (292)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 4678899999999999976
Q ss_pred hcCCcchHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALER-EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~-g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
.. .....+.+|.+||.+|... |+|++|+.+|++||.|.+..- +.+..+.+|++||.+|..+|+|++|+.+|++++.
T Consensus 110 ~g-~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 110 RG-QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ--SVALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cC-CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC--ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 53 3456789999999999996 999999999999999988642 3445688999999999999999999999999998
Q ss_pred HH
Q 011692 305 VC 306 (479)
Q Consensus 305 I~ 306 (479)
+.
T Consensus 187 ~~ 188 (292)
T 1qqe_A 187 SS 188 (292)
T ss_dssp TT
T ss_pred HH
Confidence 64
No 17
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.56 E-value=1.4e-14 Score=152.35 Aligned_cols=107 Identities=11% Similarity=0.041 Sum_probs=101.9
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 205 DESDLDLAWKMLDVARAIAEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 205 d~~dle~Awe~Le~Ar~Iyek~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
..++|+.|..+|+.++.|+++.++ .|+.++.++++||.+|..+|+|++|+.+|+++|.|+++++|++||.+|.+|+|||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 456889999999999999999887 5899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 284 LCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 284 ~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
.+|..+|+|++|+.+|++||+|++..++
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999888755
No 18
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.56 E-value=1.2e-13 Score=134.19 Aligned_cols=194 Identities=15% Similarity=0.068 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCC--CCCCCcCCCC
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQ 140 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG--~~~~~~~e~~ 140 (479)
......++.++..++..|+|++|+++|.+++++.... .........++.+|..++..++.+...-- .+......
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-- 147 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH--PEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT-- 147 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC--
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCC--hhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc--
Confidence 4567788889999999999999999999988864331 11245667778888888887554322100 00000000
Q ss_pred CCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHH
Q 011692 141 QGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVAR 220 (479)
Q Consensus 141 ~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar 220 (479)
..+.. ..... .. ..+..--..++++.|+++|+.|+
T Consensus 148 ---~~~~~----------------~~~~~-----~~---------------------~lg~~y~~~~~~~~A~~~~~kal 182 (293)
T 2qfc_A 148 ---GIDVY----------------QNLYI-----EN---------------------AIANIYAENGYLKKGIDLFEQIL 182 (293)
T ss_dssp ---SSCTT----------------HHHHH-----HH---------------------HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---CCchH----------------HHHHH-----HH---------------------HHHHHHHHcCCHHHHHHHHHHHH
Confidence 00000 00000 00 00000123478999999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHH-HHHH
Q 011692 221 AIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA-IPYC 299 (479)
Q Consensus 221 ~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeA-i~~~ 299 (479)
.++..........+.+|++||.+|..+|+|++|+.+|+++|.+.... .++..++.+|++||.+|..+|++++| +.+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~ 260 (293)
T 2qfc_A 183 KQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMALIGQLYYQRGECLRKLEYEEAEIEDAY 260 (293)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCSSHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 99988765333344899999999999999999999999999998653 45667899999999999999999999 8889
Q ss_pred HHHHHHHH
Q 011692 300 QKAISVCK 307 (479)
Q Consensus 300 ekAL~I~k 307 (479)
++|+.+++
T Consensus 261 ~~Al~~~~ 268 (293)
T 2qfc_A 261 KKASFFFD 268 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 19
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.54 E-value=3.6e-13 Score=135.07 Aligned_cols=154 Identities=14% Similarity=0.098 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCC
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~ 142 (479)
...+..+..+|..++.+|+|+.|+.+|.+|+++.... +...+..+.+|+++|.+++.+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~y~~~--------------------- 195 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDF--------------------- 195 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-TTCHHHHHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHh---------------------
Confidence 4568899999999999999999999999999997653 333467899999999999875
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
++++.|.+.|+.|+.+
T Consensus 196 ----------------------------------------------------------------~~~~~A~~~~~~al~~ 211 (378)
T 3q15_A 196 ----------------------------------------------------------------KHYDKALPHLEAALEL 211 (378)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------CCHHHHHHHHHHHHHH
Confidence 4688899999999999
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
+.+.. .....+.+|.+||.++..+|+|++|+.+|++|+.+.+.. .++..+.++++||.+|..+|++++|+.+|++|
T Consensus 212 ~~~~~-~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 287 (378)
T 3q15_A 212 AMDIQ-NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEG 287 (378)
T ss_dssp HHHTT-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcC-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 97763 345789999999999999999999999999999999887 45566999999999999999999999999999
Q ss_pred HHHH
Q 011692 303 ISVC 306 (479)
Q Consensus 303 L~I~ 306 (479)
+.+.
T Consensus 288 l~~~ 291 (378)
T 3q15_A 288 LDHI 291 (378)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 9984
No 20
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.54 E-value=2.1e-13 Score=133.96 Aligned_cols=148 Identities=18% Similarity=0.129 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCcc
Q 011692 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (479)
Q Consensus 68 ~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de 147 (479)
.+...|..+..+|+|++|+++|.+|+++.... | .....+.+|.++|.++..+++
T Consensus 38 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~------------------------ 91 (307)
T 2ifu_A 38 EYAKAAVAFKNAKQLEQAKDAYLQEAEAHANN-R-SLFHAAKAFEQAGMMLKDLQR------------------------ 91 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTC------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHhCCC------------------------
Confidence 34445788999999999999999999997664 3 345778999999999987632
Q ss_pred ccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011692 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 227 (479)
Q Consensus 148 ~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~ 227 (479)
++.|...|+.|+.||.+..
T Consensus 92 -------------------------------------------------------------~~~A~~~~~~Al~l~~~~g 110 (307)
T 2ifu_A 92 -------------------------------------------------------------MPEAVQYIEKASVMYVENG 110 (307)
T ss_dssp -------------------------------------------------------------GGGGHHHHHHHHHHHHTTT
T ss_pred -------------------------------------------------------------HHHHHHHHHHHHHHHHHcC
Confidence 3334555555555554432
Q ss_pred CCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 228 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 228 ~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
.....+.+|.+||.+|.. |+|++|+.+|++||.+.+..- +.+..+.+|++||.+|..+|+|++|+.+|++++.+.
T Consensus 111 -~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 111 -TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEE--RLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp -CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCC--ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 223445666666666655 666666666666666655421 233445666666666666666666666666666554
No 21
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.52 E-value=5.2e-14 Score=150.21 Aligned_cols=107 Identities=11% Similarity=0.000 Sum_probs=102.6
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 205 DESDLDLAWKMLDVARAIAEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 205 d~~dle~Awe~Le~Ar~Iyek~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
..++|+.|..+++.++.|+++.++ .|+.++.++++||.+|..+|+|++|+.+|+++|+|+++++|++||.+|.+|+|||
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 568899999999999999999887 5899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 284 LCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 284 ~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
.+|..+|+|++|+.+|++||+|++..++
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999888765
No 22
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.8e-13 Score=127.03 Aligned_cols=141 Identities=21% Similarity=0.258 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHH----------------HHHHHHhhhhccCCcC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQ----------------YGRALLYKAQEEADPL 129 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~----------------YG~ALl~~ar~esdvL 129 (479)
+..++.+|..++..|+|++|+.+|.+++++ +|+.+.+|++ +|.+|+..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~-------- 67 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL--------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKN-------- 67 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC--------
Confidence 678899999999999999999999999998 8999999999 88888764
Q ss_pred CCCCCCcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChH
Q 011692 130 VSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDL 209 (479)
Q Consensus 130 G~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dl 209 (479)
+++
T Consensus 68 -----------------------------------------------------------------------------g~~ 70 (208)
T 3urz_A 68 -----------------------------------------------------------------------------RNY 70 (208)
T ss_dssp -----------------------------------------------------------------------------TCH
T ss_pred -----------------------------------------------------------------------------CCH
Confidence 456
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhH--------------
Q 011692 210 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI-------------- 275 (479)
Q Consensus 210 e~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~i-------------- 275 (479)
+.|...|+.++.+ .|..+.+|.+||.++...|+|++|+.+|+++|++...... -+..+
T Consensus 71 ~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~-a~~~lg~~~~~~~~~~~~~ 142 (208)
T 3urz_A 71 DKAYLFYKELLQK-------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA-ANIFLGNYYYLTAEQEKKK 142 (208)
T ss_dssp HHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHhHHHHHH
Confidence 6777777777654 2455788999999999999999999999999887432110 00001
Q ss_pred --------------HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Q 011692 276 --------------AELNFRICLCLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 276 --------------Aea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
..++|++|+++...++|++|+.+|++||.+..
T Consensus 143 ~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 143 LETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 12345666677777788888888888887654
No 23
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.50 E-value=8e-13 Score=131.65 Aligned_cols=192 Identities=15% Similarity=0.115 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCC--CCCCCcCCCC
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQ 140 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG--~~~~~~~e~~ 140 (479)
...+..|+.+|..++..|+|++|+.+|.+++++... .....+.+|+.+|.+++..++.+...-- .....
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~----~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----- 115 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE----DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTL----- 115 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS----CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc----ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----
Confidence 466889999999999999999999999999998543 4678888999999999999765332100 00000
Q ss_pred CCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHH
Q 011692 141 QGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVAR 220 (479)
Q Consensus 141 ~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar 220 (479)
. ... .+....... . -..+...-..++++.|..+|+.++
T Consensus 116 ---------~-----------------~~~-~~~~~~~~~-~--------------~~l~~~~~~~g~~~~A~~~~~~al 153 (411)
T 4a1s_A 116 ---------A-----------------KSM-NDRLGEAKS-S--------------GNLGNTLKVMGRFDEAAICCERHL 153 (411)
T ss_dssp ---------H-----------------HHT-TCHHHHHHH-H--------------HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---------H-----------------HHc-cCchHHHHH-H--------------HHHHHHHHHCCCHHHHHHHHHHHH
Confidence 0 000 000000000 0 000000123478999999999999
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcCC-----------------HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 221 AIAEKHWGDSMEKVDILSALAEVALERED-----------------IETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 221 ~Iyek~~~~~~~~A~v~~~LGev~le~g~-----------------yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
.++.+.. ..+..+.+|..||.++...|+ |++|+.+|++++.+.+.. .+++.++.+|++||
T Consensus 154 ~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la 230 (411)
T 4a1s_A 154 TLARQLG-DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLG 230 (411)
T ss_dssp HHHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred HHHHHhh-chHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHH
Confidence 9988764 456789999999999999999 999999999999999887 36688999999999
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHHH
Q 011692 284 LCLEIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 284 ~ay~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
.+|...|+|++|+.+|++++.+...
T Consensus 231 ~~~~~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 231 NTYYLLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998764
No 24
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.49 E-value=4.1e-13 Score=130.96 Aligned_cols=156 Identities=12% Similarity=0.045 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..|.++|..+..+|+|++|+.+|.+|+++.... |. ....+.+|+++|.+|...
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g~-~~~~a~~~~~lg~~~~~~----------------------- 130 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR-GQ-FRRGANFKFELGEILEND----------------------- 130 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-CC-HHHHHHHHHHHHHHHHHh-----------------------
Confidence 37788999999999999999999999999997553 32 344578999999988752
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
.++++.|.++|+.|+.++.
T Consensus 131 -------------------------------------------------------------lg~~~~A~~~~~~Al~~~~ 149 (292)
T 1qqe_A 131 -------------------------------------------------------------LHDYAKAIDCYELAGEWYA 149 (292)
T ss_dssp -------------------------------------------------------------TCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------hcCHHHHHHHHHHHHHHHH
Confidence 0467889999999999987
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
... .....+.+|.+||.++..+|+|++|+.+|++++.+..... ..+...+.+|+++|.||..+|++++|+.+|++++.
T Consensus 150 ~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 227 (292)
T 1qqe_A 150 QDQ-SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR-LSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQS 227 (292)
T ss_dssp HTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT-TTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGC
T ss_pred hCC-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC-cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 653 2334678999999999999999999999999998864321 11235678999999999999999999999999998
Q ss_pred HHHH
Q 011692 305 VCKS 308 (479)
Q Consensus 305 I~k~ 308 (479)
+...
T Consensus 228 l~p~ 231 (292)
T 1qqe_A 228 EDPN 231 (292)
T ss_dssp C---
T ss_pred hCCC
Confidence 6554
No 25
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.49 E-value=1.1e-12 Score=130.77 Aligned_cols=99 Identities=11% Similarity=0.115 Sum_probs=88.9
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 011692 206 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 285 (479)
Q Consensus 206 ~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 285 (479)
.++++.|.++|+.++.++.+.. ..+..+.+|..||.++..+|+|++|+.+|++++.+.+... +++..+.+|++||.+
T Consensus 99 ~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~ 175 (411)
T 4a1s_A 99 LGDYNKAMQYHKHDLTLAKSMN-DRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG--DRLSEGRALYNLGNV 175 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcc-CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHH
Confidence 3688999999999999987763 4577899999999999999999999999999999998873 678899999999999
Q ss_pred HHcCCC-----------------hhHHHHHHHHHHHHHH
Q 011692 286 LEIGSK-----------------PQEAIPYCQKAISVCK 307 (479)
Q Consensus 286 y~~~g~-----------------~eeAi~~~ekAL~I~k 307 (479)
|...|+ |++|+.+|++++.+.+
T Consensus 176 ~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~ 214 (411)
T 4a1s_A 176 YHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMR 214 (411)
T ss_dssp HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999988753
No 26
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.49 E-value=4.4e-13 Score=149.24 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..+.++|..++.+|+|++|+.+|.+|+++ +|+.+.+|+++|.+|+.+++.+..+--. +.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~P~~~~a~~nLg~~l~~~g~~~~A~~~~--~k---------- 102 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRI--------SPTFADAYSNMGNTLKEMQDVQGALQCY--TR---------- 102 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH--HH----------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHH--HH----------
Confidence 677899999999999999999999999998 8999999999999999987654321100 00
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
.+. .++... .+ . -+.+......++++.|.+.|+.|+.+
T Consensus 103 --Al~--l~P~~~---------~a-----~---------------------~~Lg~~~~~~g~~~eAi~~~~~Al~l--- 140 (723)
T 4gyw_A 103 --AIQ--INPAFA---------DA-----H---------------------SNLASIHKDSGNIPEAIASYRTALKL--- 140 (723)
T ss_dssp --HHH--HCTTCH---------HH-----H---------------------HHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred --HHH--hCCCCH---------HH-----H---------------------HHHHHHHHHcCCHHHHHHHHHHHHHh---
Confidence 000 000000 00 0 00001112346677777777777654
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMV 268 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ll 268 (479)
.+..+.+|.+||.++..+++|++|+..|+++++|....+
T Consensus 141 ----~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ----KPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ----CSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ----CCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHH
Confidence 456789999999999999999999999999999987653
No 27
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.49 E-value=3.3e-13 Score=126.06 Aligned_cols=133 Identities=18% Similarity=0.127 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+|+..
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~------------------------ 52 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKE--------NPQDPEALYWLARTQLKL------------------------ 52 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SSSCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc------------------------
Confidence 356889999999999999999999999987 899999999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|...|+.++.+
T Consensus 53 -------------------------------------------------------------g~~~~A~~~~~~al~~--- 68 (217)
T 2pl2_A 53 -------------------------------------------------------------GLVNPALENGKTLVAR--- 68 (217)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHh---
Confidence 3566777777777755
Q ss_pred hcCCcchHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH
Q 011692 226 HWGDSMEKVDILSALAEVALER-----------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 294 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~-----------g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee 294 (479)
.|..+.+|.+||.++..+ |+|++|+..|++++++.. .-+.+|++||.+|...|++++
T Consensus 69 ----~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P--------~~~~~~~~lg~~~~~~g~~~~ 136 (217)
T 2pl2_A 69 ----TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNP--------RYAPLHLQRGLVYALLGERDK 136 (217)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHH
T ss_pred ----CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHHHHcCChHH
Confidence 345688999999999999 999999999999999843 335899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011692 295 AIPYCQKAISVC 306 (479)
Q Consensus 295 Ai~~~ekAL~I~ 306 (479)
|+.+|++|+++.
T Consensus 137 A~~~~~~al~~~ 148 (217)
T 2pl2_A 137 AEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcc
Confidence 999999999874
No 28
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.48 E-value=1.5e-12 Score=127.93 Aligned_cols=99 Identities=12% Similarity=0.119 Sum_probs=88.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERED--------------------IETSLSDYQKALTILER 266 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~--------------------yeeAl~dy~kAL~I~~~ 266 (479)
++++.|..+++.++.++.+.. .....+.+|..||.++...|+ |++|+..|++++.+.+.
T Consensus 101 g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~ 179 (406)
T 3sf4_A 101 GNFDEAIVCCQRHLDISRELN-DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTA 179 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcc-cccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 678899999999999988764 346679999999999999999 99999999999999988
Q ss_pred hcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 011692 267 MVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 267 llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
. .+++..+.+|++||.+|...|+|++|+.+|++++.+...
T Consensus 180 ~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 180 L--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp T--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH
T ss_pred c--cCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Confidence 7 467889999999999999999999999999999988654
No 29
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.47 E-value=1.6e-12 Score=120.27 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCCh-hHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELAL-ECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~p-e~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
..|+.+|..++..|+|++|+.+|.+++++ .| ....+|+++|.+++.+
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~~~~~~~~~------------------------ 55 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKL--------TNNQDSVTAYNCGVCADNI------------------------ 55 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTTCCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc--------cCCCCcHHHHHHHHHHHHh------------------------
Confidence 68899999999999999999999999998 44 5668899999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|...|+.|+.+
T Consensus 56 -------------------------------------------------------------~~~~~A~~~~~~al~~--- 71 (228)
T 4i17_A 56 -------------------------------------------------------------KKYKEAADYFDIAIKK--- 71 (228)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHT---
T ss_pred -------------------------------------------------------------hcHHHHHHHHHHHHHh---
Confidence 3567787777777642
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.+....+|..||.++..+|+|++|+..|++++.+..... .-...++.+|+++|.+|...|++++|+.+|+++|.+
T Consensus 72 ----~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 72 ----NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA-TIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp ----TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred ----CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH-HHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 456789999999999999999999999999998753210 012357789999999999999999999999999987
Q ss_pred HHH
Q 011692 306 CKS 308 (479)
Q Consensus 306 ~k~ 308 (479)
...
T Consensus 147 ~p~ 149 (228)
T 4i17_A 147 TSK 149 (228)
T ss_dssp SCH
T ss_pred CCC
Confidence 554
No 30
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.46 E-value=1.7e-12 Score=127.42 Aligned_cols=150 Identities=13% Similarity=0.099 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..|.++|..+..+|+|++|+.+|.+|+++... .|. ....+.+|+++|.+|..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~-~g~-~~~~a~~~~~lg~~~~~------------------------ 128 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVE-NGT-PDTAAMALDRAGKLMEP------------------------ 128 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHT-TTC-HHHHHHHHHHHHHHHTT------------------------
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCC-HHHHHHHHHHHHHHHHc------------------------
Confidence 3668889999999999999999999999999754 332 23567888888888731
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|+++|+.|+.++.
T Consensus 129 --------------------------------------------------------------g~~~~A~~~~~~Al~~~~ 146 (307)
T 2ifu_A 129 --------------------------------------------------------------LDLSKAVHLYQQAAAVFE 146 (307)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Confidence 467889999999999998
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
... .....+.+|.+||.++..+|+|++|+.+|+++|.+.+... ..+..+.+++++|.+|..+|++++|+.+|++++
T Consensus 147 ~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al- 222 (307)
T 2ifu_A 147 NEE-RLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME--NYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY- 222 (307)
T ss_dssp HTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-
T ss_pred hCC-ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-
Confidence 753 3445789999999999999999999999999999998764 255678899999999999999999999999998
Q ss_pred HH
Q 011692 305 VC 306 (479)
Q Consensus 305 I~ 306 (479)
+.
T Consensus 223 ~~ 224 (307)
T 2ifu_A 223 SI 224 (307)
T ss_dssp TS
T ss_pred CC
Confidence 53
No 31
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.45 E-value=4.3e-12 Score=124.72 Aligned_cols=154 Identities=16% Similarity=0.136 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhc
Q 011692 65 FADELMEKGTNALKESD--------------------YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gd--------------------yeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~ 124 (479)
.+..+..+|..++..|+ |++|+.+|.+++.+.... ...+..+.+|+++|.+++..
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~--- 200 (406)
T 3sf4_A 126 EARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLL--- 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHc---
Confidence 36688999999999999 999999999999997765 35688899999999999876
Q ss_pred cCCcCCCCCCCcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCcccccccc
Q 011692 125 EADPLVSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADE 204 (479)
Q Consensus 125 esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~e 204 (479)
T Consensus 201 -------------------------------------------------------------------------------- 200 (406)
T 3sf4_A 201 -------------------------------------------------------------------------------- 200 (406)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 011692 205 DESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 284 (479)
Q Consensus 205 d~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 284 (479)
++++.|..+|+.++.++.+.. .....+.+|.+||.++..+|+|++|+.+|++++.+..... +++..+.+|++||.
T Consensus 201 --g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~ 275 (406)
T 3sf4_A 201 --GNFRDAVIAHEQRLLIAKEFG-DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK--DRAVEAQSCYSLGN 275 (406)
T ss_dssp --TBHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred --cCHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCc--CchHHHHHHHHHHH
Confidence 356667777777777776653 2445677788888888888888888888888887777652 45666777888888
Q ss_pred HHHcCCChhHHHHHHHHHHHHHHH
Q 011692 285 CLEIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 285 ay~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
+|...|++++|+.+|++++.+...
T Consensus 276 ~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 276 TYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHh
Confidence 888888888888888887777543
No 32
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.45 E-value=2e-12 Score=120.64 Aligned_cols=143 Identities=14% Similarity=0.081 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++.+|+|++|+.+|.+++++ .|..+.+|+++|.+|+...+....
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~~~------------------ 92 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVAR--------TPRYLGGYMVLSEAYVALYRQAED------------------ 92 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHTCSS------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHhhhhhhh------------------
Confidence 567889999999999999999999999998 799999999999999987321000
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
. .-..++++.|...|+.|+.+
T Consensus 93 --------------------~------------------------------------~~~~g~~~~A~~~~~~al~~--- 113 (217)
T 2pl2_A 93 --------------------R------------------------------------ERGKGYLEQALSVLKDAERV--- 113 (217)
T ss_dssp --------------------H------------------------------------HHHHHHHHHHHHHHHHHHHH---
T ss_pred --------------------h------------------------------------cccccCHHHHHHHHHHHHHh---
Confidence 0 00125777888777777765
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.|..+.+|.+||.++..+|+|++|+..|++++++. . -+.++++||.+|..+|++++|+.+|++++.+
T Consensus 114 ----~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~--------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 114 ----NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-D--------TPEIRSALAELYLSMGRLDEALAQYAKALEQ 180 (217)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C--------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ----CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-c--------chHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999986 2 2588999999999999999999999999986
Q ss_pred H
Q 011692 306 C 306 (479)
Q Consensus 306 ~ 306 (479)
.
T Consensus 181 ~ 181 (217)
T 2pl2_A 181 A 181 (217)
T ss_dssp S
T ss_pred C
Confidence 4
No 33
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.45 E-value=6.8e-12 Score=115.43 Aligned_cols=149 Identities=18% Similarity=0.117 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..+..+|..++..|+|++|+.+|.+++++. ....+|+.+|.+++..
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~~~~~~~~---------------------- 51 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH---------KDITYLNNRAAAEYEK---------------------- 51 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---------CCTHHHHHHHHHHHHT----------------------
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh---------ccHHHHHHHHHHHHHc----------------------
Confidence 458899999999999999999999999999982 3467999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|.+.|+.++.+.
T Consensus 52 ---------------------------------------------------------------~~~~~A~~~~~~a~~~~ 68 (258)
T 3uq3_A 52 ---------------------------------------------------------------GEYETAISTLNDAVEQG 68 (258)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ccHHHHHHHHHHHHHhC
Confidence 46788999999999888
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-------------------HHhcCCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL-------------------ERMVEPDSRHIAELNFRICL 284 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~-------------------~~llg~d~r~iAea~~~LG~ 284 (479)
.......+..+.+|..||.++...|+|++|+..|++++.+. ++.+ ..++..+.+|+++|.
T Consensus 69 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~ 147 (258)
T 3uq3_A 69 REMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEA-YVNPEKAEEARLEGK 147 (258)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHH-HcCcchHHHHHHHHH
Confidence 76644445568999999999999999999999999999952 1111 146777899999999
Q ss_pred HHHcCCChhHHHHHHHHHHHHHH
Q 011692 285 CLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 285 ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
+|...|++++|+.+|++++.+..
T Consensus 148 ~~~~~~~~~~A~~~~~~a~~~~~ 170 (258)
T 3uq3_A 148 EYFTKSDWPNAVKAYTEMIKRAP 170 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHhcCHHHHHHHHHHHHhcCc
Confidence 99999999999999999998654
No 34
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.45 E-value=1.9e-13 Score=143.43 Aligned_cols=106 Identities=6% Similarity=-0.022 Sum_probs=98.6
Q ss_pred cChHHHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 011692 206 ESDLDLAWKMLDVARAIAEKHWG-DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 284 (479)
Q Consensus 206 ~~dle~Awe~Le~Ar~Iyek~~~-~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 284 (479)
.+.++.|.++++.++.|+++.++ .++.++.++++||.+|..+|+|++|+.+|+++|.|+++++|++||.+|.+|+|||.
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 45678888888888888888776 57899999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 285 CLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 285 ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
+|..+|+|++|+.+|++|++|++..++
T Consensus 380 ~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 380 LQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999888765
No 35
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.45 E-value=5.2e-13 Score=123.53 Aligned_cols=125 Identities=14% Similarity=0.048 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCc
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~d 146 (479)
..+..+|..++.+|+|++|+.+|.+|+++ .|....+|+.+|.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~------------------------- 89 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKK--------NYNLANAYIGKSAAYRDM------------------------- 89 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------TCSHHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------CcchHHHHHHHHHHHHHc-------------------------
Confidence 45677999999999999999999999976 789999999999999875
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011692 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 226 (479)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~ 226 (479)
++++.|...|+.++.++-..
T Consensus 90 ------------------------------------------------------------~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 90 ------------------------------------------------------------KNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHSTTC
T ss_pred ------------------------------------------------------------ccHHHHHHHHHHHHHHCCCc
Confidence 45777888888888765433
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh--HHHHHHHHHHHHHcCCCh
Q 011692 227 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH--IAELNFRICLCLEIGSKP 292 (479)
Q Consensus 227 ~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~--iAea~~~LG~ay~~~g~~ 292 (479)
......++.+|..+|.++..+|+|++|+..|+++|++ +|. .+.+|++||.+|...++.
T Consensus 110 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 110 ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--------TSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--------CCCcccHHHHHHHHHHHHHHHHH
Confidence 2222456789999999999999999999999999987 344 578999999999888877
No 36
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.44 E-value=5.1e-12 Score=119.47 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERED--------------------IETSLSDYQKALTILER 266 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~--------------------yeeAl~dy~kAL~I~~~ 266 (479)
++++.|.+.++.++.++.+.. .....+.+|..||.++...|+ |++|+..|++++.+.+.
T Consensus 97 g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~ 175 (338)
T 3ro2_A 97 GNFDEAIVCCQRHLDISRELN-DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTA 175 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 578889999999999988764 345678999999999999999 99999999999999888
Q ss_pred hcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 011692 267 MVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 267 llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
.. +.+..+.++++||.+|...|++++|+.+|++++.+...
T Consensus 176 ~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 176 LG--DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 73 67788999999999999999999999999999998654
No 37
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.44 E-value=4.2e-12 Score=120.03 Aligned_cols=150 Identities=18% Similarity=0.174 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..|+..|..++..|+|++|+.+|.+++++ .....+..+.+|+.+|.+++..
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~----~~~~~~~~~~~~~~l~~~~~~~------------------------ 56 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQV----GTEDLKTLSAIYSQLGNAYFYL------------------------ 56 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CCSCHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhh----CcccHHHHHHHHHHHHHHHHHc------------------------
Confidence 567889999999999999999999999997 2222334578999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|.++++.++.++.+
T Consensus 57 -------------------------------------------------------------g~~~~A~~~~~~al~~~~~ 75 (338)
T 3ro2_A 57 -------------------------------------------------------------HDYAKALEYHHHDLTLART 75 (338)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHHhhc
Confidence 4577889999999998877
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC--------------
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK-------------- 291 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~-------------- 291 (479)
.. ..+..+.+|..||.++..+|+|++|+..|++++.+.+... +++.++.++++||.+|...|+
T Consensus 76 ~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T 3ro2_A 76 IG-DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFP 152 (338)
T ss_dssp HT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CC
T ss_pred cc-ccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHcCcccccchhhhhhhhh
Confidence 63 4567899999999999999999999999999999998863 567789999999999999999
Q ss_pred ------hhHHHHHHHHHHHHHH
Q 011692 292 ------PQEAIPYCQKAISVCK 307 (479)
Q Consensus 292 ------~eeAi~~~ekAL~I~k 307 (479)
+++|+.+|++++.+.+
T Consensus 153 ~~a~~~~~~A~~~~~~a~~~~~ 174 (338)
T 3ro2_A 153 EDVRNALQAAVDLYEENLSLVT 174 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888887754
No 38
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.43 E-value=2.7e-12 Score=110.63 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCC
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~ 142 (479)
.+.|..+.++|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+|+.+
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~--------------------- 55 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEE--------------------- 55 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHh---------------------
Confidence 356788899999999999999999999999998 799999999999999876
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
++|+.|.+.++.|+.+
T Consensus 56 ----------------------------------------------------------------~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 56 ----------------------------------------------------------------KKFAECVQFCEKAVEV 71 (127)
T ss_dssp ----------------------------------------------------------------TCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------hhHHHHHHHHHHHHHh
Confidence 4678899999999999
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
..........++.+|.+||.++..+++|++|+.+|+++|.+.
T Consensus 72 ~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 72 GRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 877766667789999999999999999999999999999863
No 39
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.43 E-value=2.1e-12 Score=111.57 Aligned_cols=115 Identities=19% Similarity=0.207 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
+.|..+.++|..++.+|+|++|+.+|.+|+++ .|..+.+|+++|.+|+.+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~---------------------- 60 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKL---------------------- 60 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhh----------------------
Confidence 34788999999999999999999999999998 799999999999999876
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|.+.|+.|+.+
T Consensus 61 ---------------------------------------------------------------~~~~~A~~~~~~al~~- 76 (126)
T 4gco_A 61 ---------------------------------------------------------------MEFQRALDDCDTCIRL- 76 (126)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHH-
T ss_pred ---------------------------------------------------------------ccHHHHHHHHHHHHHh-
Confidence 3567788888888765
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
.+..+.+|.+||.++..+|+|++|+.+|+++|++.+ ++ .+++.+|+.|+
T Consensus 77 ------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P-----~~---~~a~~~l~~~l 125 (126)
T 4gco_A 77 ------DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDP-----SN---EEAREGVRNCL 125 (126)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHC
T ss_pred ------hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCc-----CC---HHHHHHHHHhc
Confidence 345678999999999999999999999999999843 33 47888888775
No 40
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.42 E-value=1.6e-13 Score=121.51 Aligned_cols=129 Identities=11% Similarity=0.092 Sum_probs=107.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccc
Q 011692 71 EKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVK 150 (479)
Q Consensus 71 ~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~ 150 (479)
.+|..+...|++++|+..|.+++.. .|+....+|.+|++++..
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~--------~p~~~~~~~~la~~y~~~----------------------------- 44 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS--------PRQKSIKGFYFAKLYYEA----------------------------- 44 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS--------HHHHHTTHHHHHHHHHHT-----------------------------
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc--------CcccHHHHHHHHHHHHHc-----------------------------
Confidence 3688888999999999999999986 789999999999999875
Q ss_pred cccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCc
Q 011692 151 NAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDS 230 (479)
Q Consensus 151 ~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~ 230 (479)
++|+.|.+.|+.|+.+ .
T Consensus 45 --------------------------------------------------------~~~~~A~~~~~~al~~-------~ 61 (150)
T 4ga2_A 45 --------------------------------------------------------KEYDLAKKYICTYINV-------Q 61 (150)
T ss_dssp --------------------------------------------------------TCHHHHHHHHHHHHHH-------C
T ss_pred --------------------------------------------------------CCHHHHHHHHHHHHHh-------C
Confidence 4677888888888765 3
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHH-HHHHHHHH
Q 011692 231 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC-QKAISVCK 307 (479)
Q Consensus 231 ~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~-ekAL~I~k 307 (479)
+..+.+|.+||.++..+|+|++|+.+|+++|++... -+.+|++||.+|...+++++|+.+| ++|+++..
T Consensus 62 p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~--------~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 62 ERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPT--------QKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP 131 (150)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST
T ss_pred CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc
Confidence 456889999999999999999999999999998432 2589999999999999999988765 89998743
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.42 E-value=3.5e-12 Score=109.88 Aligned_cols=91 Identities=16% Similarity=0.175 Sum_probs=81.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++|+.|.+.|+.|+.+ .|..+.+|.+||.+++.+|+|++|+.+|++||.|.+... ..++.++.+|++||.+|
T Consensus 22 ~~~~~A~~~y~~Al~~-------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~a~~~~~lg~~~ 93 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIEL-------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR-ADYKLIAKAMSRAGNAF 93 (127)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc-hhhHHHHHHHHHHHHHH
Confidence 4688899999888876 245688999999999999999999999999999988754 46788999999999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
..+++|++|+.+|++||.+
T Consensus 94 ~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 94 QKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhh
Confidence 9999999999999999865
No 42
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=1.5e-12 Score=118.39 Aligned_cols=142 Identities=15% Similarity=0.073 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCC
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~ 141 (479)
++..+..++.+|..++..|+|++|+.+|.+++. | .+.+|+++|.+++..
T Consensus 2 s~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~----------~-~~~~~~~lg~~~~~~-------------------- 50 (213)
T 1hh8_A 2 SLVEAISLWNEGVLAADKKDWKGALDAFSAVQD----------P-HSRICFNIGCMYTIL-------------------- 50 (213)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS----------C-CHHHHHHHHHHHHHT--------------------
T ss_pred ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC----------C-ChHHHHHHHHHHHHc--------------------
Confidence 356778899999999999999999999999841 1 467999999999875
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~ 221 (479)
++++.|.+.|+.|+.
T Consensus 51 -----------------------------------------------------------------g~~~~A~~~~~~al~ 65 (213)
T 1hh8_A 51 -----------------------------------------------------------------KNMTEAEKAFTRSIN 65 (213)
T ss_dssp -----------------------------------------------------------------TCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------CCHHHHHHHHHHHHH
Confidence 457778888888876
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc--------CCCChhHHHHHHHHHHHHHcCCChh
Q 011692 222 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMV--------EPDSRHIAELNFRICLCLEIGSKPQ 293 (479)
Q Consensus 222 Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ll--------g~d~r~iAea~~~LG~ay~~~g~~e 293 (479)
+. +..+.+|.+||.++..+|+|++|+.+|++++.+..... ...++..+.+|++||.+|...|+++
T Consensus 66 ~~-------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 138 (213)
T 1hh8_A 66 RD-------KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWK 138 (213)
T ss_dssp HC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHH
T ss_pred hC-------ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHH
Confidence 63 34578999999999999999999999999998754321 0134567799999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISVC 306 (479)
Q Consensus 294 eAi~~~ekAL~I~ 306 (479)
+|+.+|++++.+.
T Consensus 139 ~A~~~~~~al~~~ 151 (213)
T 1hh8_A 139 KAEEQLALATSMK 151 (213)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999764
No 43
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.40 E-value=9.9e-12 Score=120.58 Aligned_cols=100 Identities=16% Similarity=0.189 Sum_probs=86.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|+..|+.|+.++.+.. .....+.+|++||.+|..+|+|++|+.+|++||.+.+.+ +.+++.++.+|++||.+|
T Consensus 129 ~~~~~Ai~~~~~al~~~~~~~-~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y 206 (293)
T 3u3w_A 129 VDYEYCILELKKLLNQQLTGI-DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKAL 206 (293)
T ss_dssp SCHHHHHHHHHHHHHTCCCCS-CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcccc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHH
Confidence 468889999999988654432 234578899999999999999999999999999998876 347888999999999999
Q ss_pred HcCCChhHHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
..+++|++|+.+|++||.+.+.
T Consensus 207 ~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 207 YLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998654
No 44
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.40 E-value=3.7e-12 Score=123.66 Aligned_cols=100 Identities=16% Similarity=0.193 Sum_probs=83.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|.+.|+.|+.++.+.. .....+.+|++||.+|..+|+|++|+.+|++||.+.+.... +....+.+|++||.+|
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y 206 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGI-DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKAL 206 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSS-CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHH
Confidence 578889888888887665432 23456899999999999999999999999999999887542 2233448999999999
Q ss_pred HcCCChhHHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
..+|+|++|+.+|++||.+...
T Consensus 207 ~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 207 YLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998753
No 45
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.39 E-value=1.2e-11 Score=106.82 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=115.6
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCC
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQ 140 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~ 140 (479)
.....+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+++..
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~a~~~~~~------------------- 60 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRT------------------- 60 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT-------------------
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHc-------------------
Confidence 45677999999999999999999999999999997 688899999999999875
Q ss_pred CCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHH
Q 011692 141 QGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVAR 220 (479)
Q Consensus 141 ~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar 220 (479)
++++.|..+|+.++
T Consensus 61 ------------------------------------------------------------------~~~~~A~~~~~~a~ 74 (166)
T 1a17_A 61 ------------------------------------------------------------------ECYGYALGDATRAI 74 (166)
T ss_dssp ------------------------------------------------------------------TCHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------CCHHHHHHHHHHHH
Confidence 35777888888887
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHH
Q 011692 221 AIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 300 (479)
Q Consensus 221 ~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~e 300 (479)
.+. +....+|..+|.++..+|+|++|+..|++++.+.. .+.. +..++.++..+...+++++|+.+|+
T Consensus 75 ~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p-----~~~~-~~~~~~~~~~~~~~~~~~~A~~~~~ 141 (166)
T 1a17_A 75 ELD-------KKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP-----HDKD-AKMKYQECNKIVKQKAFERAIAGDE 141 (166)
T ss_dssp HHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TCHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhC-------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----CCHH-HHHHHHHHHHHHHHHHHHHHHHccc
Confidence 663 34578999999999999999999999999998743 2322 3344556666888899999999998
Q ss_pred HHHHHHH
Q 011692 301 KAISVCK 307 (479)
Q Consensus 301 kAL~I~k 307 (479)
++..++.
T Consensus 142 ~~~~~~~ 148 (166)
T 1a17_A 142 HKRSVVD 148 (166)
T ss_dssp HHHHHHH
T ss_pred chHHHhc
Confidence 8777653
No 46
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.38 E-value=2.5e-12 Score=132.49 Aligned_cols=53 Identities=11% Similarity=-0.038 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhh
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQ 123 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar 123 (479)
-..+..+..+|..+...|+|++|+.+|.+|+++ +|.++.+|+++|.+|+.+++
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l--------~P~~~~a~~~~g~~l~~~g~ 146 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL--------NAANYTVWHFRRVLLKSLQK 146 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHccc
Confidence 346778999999999999999999999999998 89999999999999998753
No 47
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.38 E-value=7.6e-12 Score=118.49 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.++++.. +.++....+||++|.+++..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~lg~~~~~~------------------------ 65 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-----RTHEWAADAQFYLARAYYQN------------------------ 65 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-----SCSTTHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----CCCcchHHHHHHHHHHHHHh------------------------
Confidence 6789999999999999999999999999862 34555599999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|...|+.++.++-.
T Consensus 66 -------------------------------------------------------------~~~~~A~~~~~~~l~~~p~ 84 (261)
T 3qky_A 66 -------------------------------------------------------------KEYLLAASEYERFIQIYQI 84 (261)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHCTT
T ss_pred -------------------------------------------------------------CcHHHHHHHHHHHHHHCCC
Confidence 4677888888888776522
Q ss_pred hcCCcchHHHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHH--------------HHHH
Q 011692 226 HWGDSMEKVDILSALAEVALE--------REDIETSLSDYQKALTILERMVEPDSRHIAELN--------------FRIC 283 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le--------~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~--------------~~LG 283 (479)
.+....+|+.||.++.. +|+|++|+..|++++.+. |+++....++ ++||
T Consensus 85 ----~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~~~~~~~~~~~~~~~la 155 (261)
T 3qky_A 85 ----DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY-----PNHELVDDATQKIRELRAKLARKQYEAA 155 (261)
T ss_dssp ----CTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC-----cCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999 999999999999999874 3444444444 9999
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHH
Q 011692 284 LCLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 284 ~ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
.+|...|+|++|+.+|+++|....
T Consensus 156 ~~~~~~g~~~~A~~~~~~~l~~~p 179 (261)
T 3qky_A 156 RLYERRELYEAAAVTYEAVFDAYP 179 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHccCHHHHHHHHHHHHHHCC
Confidence 999999999999999999998643
No 48
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.38 E-value=5.7e-12 Score=123.01 Aligned_cols=97 Identities=9% Similarity=0.033 Sum_probs=80.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC---CChhHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEP---DSRHIAELNFRIC 283 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~---d~r~iAea~~~LG 283 (479)
++++.|...|+.++.+ .+....+|..||.++..+|+|++|+..|++++.+.....++ .++..+.+|++||
T Consensus 265 g~~~~A~~~~~~al~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (368)
T 1fch_A 265 NQSEEAVAAYRRALEL-------QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLR 337 (368)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHH
Confidence 4577788888877765 23567899999999999999999999999999999877433 3556789999999
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHH
Q 011692 284 LCLEIGSKPQEAIPYCQKAISVCKSRV 310 (479)
Q Consensus 284 ~ay~~~g~~eeAi~~~ekAL~I~k~rl 310 (479)
.+|..+|++++|..+++++|++++..+
T Consensus 338 ~~~~~~g~~~~A~~~~~~~l~~~~~~~ 364 (368)
T 1fch_A 338 LALSMLGQSDAYGAADARDLSTLLTMF 364 (368)
T ss_dssp HHHHHHTCGGGHHHHHTTCHHHHHHHT
T ss_pred HHHHHhCChHhHHHhHHHHHHHHHHhc
Confidence 999999999999999999999877543
No 49
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.2e-11 Score=113.77 Aligned_cols=167 Identities=14% Similarity=0.049 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+++++... +++..+..+.+|+.+|.+++..++.+..+--- .
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~--~----------- 103 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGRE-MRADYKVISKSFARIGNAYHKLGDLKKTIEYY--Q----------- 103 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH--H-----------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc-cccchHHHHHHHHHHHHHHHHcccHHHHHHHH--H-----------
Confidence 356889999999999999999999999998543 33445666999999999999875442210000 0
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
+... . ....+.-.....++.|+.+|.+
T Consensus 104 ----------------------~a~~---~----------------------------~~~~~~~~~~~~~~~a~~~~~~ 130 (258)
T 3uq3_A 104 ----------------------KSLT---E----------------------------HRTADILTKLRNAEKELKKAEA 130 (258)
T ss_dssp ----------------------HHHH---H----------------------------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------HHHh---c----------------------------CchhHHHHHHhHHHHHHHHHHH
Confidence 0000 0 0001122222334455555555
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.....+..+.+|..+|.++...|+|++|+..|++++.+... ...+|++||.+|...|++++|+.+|++++.+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~--------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 131 EAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE--------DARGYSNRAAALAKLMSFPEAIADCNKAIEK 202 (258)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc--------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 54445678899999999999999999999999999987432 2588999999999999999999999999886
Q ss_pred HH
Q 011692 306 CK 307 (479)
Q Consensus 306 ~k 307 (479)
..
T Consensus 203 ~~ 204 (258)
T 3uq3_A 203 DP 204 (258)
T ss_dssp CT
T ss_pred CH
Confidence 43
No 50
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.37 E-value=1.1e-11 Score=125.95 Aligned_cols=147 Identities=16% Similarity=0.138 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCC-CChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGE-LALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge-~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
+..+..+|..++.+|+|++|+++|.+|++|....++. .+|..+.+|+++|.+++.+
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~----------------------- 107 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHM----------------------- 107 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHc-----------------------
Confidence 5567889999999999999999999999999988875 6899999999999999886
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|..+|+.++.|+.
T Consensus 108 --------------------------------------------------------------g~~~~A~~~~~ka~~i~~ 125 (472)
T 4g1t_A 108 --------------------------------------------------------------GRLSDVQIYVDKVKHVCE 125 (472)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CChHHHHHHHHHHHHHhH
Confidence 356677788888888887
Q ss_pred HhcC-CcchHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH---HcCCChhHHHHH
Q 011692 225 KHWG-DSMEKVDILSALAEVALER--EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL---EIGSKPQEAIPY 298 (479)
Q Consensus 225 k~~~-~~~~~A~v~~~LGev~le~--g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay---~~~g~~eeAi~~ 298 (479)
+... .++..+.+|..+|.+++.. ++|++|+.+|++||.+. |++ +++++++|.++ ...+++++|+.+
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~-----p~~---~~~~~~~~~~~~~l~~~~~~~~al~~ 197 (472)
T 4g1t_A 126 KFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK-----PKN---PEFTSGLAIASYRLDNWPPSQNAIDP 197 (472)
T ss_dssp HSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHHHHHSCCCCCTHHH
T ss_pred hcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 7654 3456777888887766654 46888888888888774 233 35556666553 445667778888
Q ss_pred HHHHHHH
Q 011692 299 CQKAISV 305 (479)
Q Consensus 299 ~ekAL~I 305 (479)
|++||.+
T Consensus 198 ~~~al~l 204 (472)
T 4g1t_A 198 LRQAIRL 204 (472)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 8777765
No 51
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.37 E-value=1.7e-11 Score=120.61 Aligned_cols=91 Identities=19% Similarity=0.180 Sum_probs=72.2
Q ss_pred cCcChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 204 EDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 204 ed~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
...++++.|..+|+.++.+... ...+.+|..||.++...|+|++|+..|++++.+.. ..+.+|++||
T Consensus 188 ~~~g~~~~A~~~~~~al~~~p~-----~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~l~ 254 (365)
T 4eqf_A 188 VDSSVLEGVKELYLEAAHQNGD-----MIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRP--------EDYSLWNRLG 254 (365)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCS-----SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--------TCHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHhCcC-----ccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC--------CCHHHHHHHH
Confidence 3456777777777777655211 11577999999999999999999999999998742 2367899999
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHH
Q 011692 284 LCLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 284 ~ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
.+|...|++++|+.+|++++.+..
T Consensus 255 ~~~~~~g~~~~A~~~~~~al~~~p 278 (365)
T 4eqf_A 255 ATLANGDRSEEAVEAYTRALEIQP 278 (365)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCC
Confidence 999999999999999999998743
No 52
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.36 E-value=1.2e-11 Score=121.65 Aligned_cols=168 Identities=16% Similarity=0.079 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
+..++.+|..++..|+|++|+.+|.+++++ +|..+.+|+.+|.+++..++.+..+ |-....
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~--------- 127 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQ--------DPGDAEAWQFLGITQAENENEQAAIVALQRCLE--------- 127 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh---------
Confidence 446889999999999999999999999998 7888999999999999874332110 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
.++... .. .. ..+..-...++++.|..+|+.++.+.
T Consensus 128 ---------~~p~~~------~~--------~~---------------------~l~~~~~~~g~~~~A~~~~~~al~~~ 163 (365)
T 4eqf_A 128 ---------LQPNNL------KA--------LM---------------------ALAVSYTNTSHQQDACEALKNWIKQN 163 (365)
T ss_dssp ---------HCTTCH------HH--------HH---------------------HHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ---------cCCCCH------HH--------HH---------------------HHHHHHHccccHHHHHHHHHHHHHhC
Confidence 000000 00 00 00000011234444444444444432
Q ss_pred HHhcCCcchHHHHHH----------HHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChh
Q 011692 224 EKHWGDSMEKVDILS----------ALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 293 (479)
Q Consensus 224 ek~~~~~~~~A~v~~----------~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~e 293 (479)
.. ...++. .||.++...|+|++|+..|++++.+.. ++ ..+.+|++||.+|...|+++
T Consensus 164 p~-------~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-----~~-~~~~~~~~l~~~~~~~g~~~ 230 (365)
T 4eqf_A 164 PK-------YKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNG-----DM-IDPDLQTGLGVLFHLSGEFN 230 (365)
T ss_dssp HH-------HHCC-------------------CCHHHHHHHHHHHHHHHHSC-----SS-CCHHHHHHHHHHHHHHTCHH
T ss_pred cc-------chHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCc-----Cc-cCHHHHHHHHHHHHHCCCHH
Confidence 21 112222 235555666666666666666555421 10 03678999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISVCK 307 (479)
Q Consensus 294 eAi~~~ekAL~I~k 307 (479)
+|+.+|++++.+..
T Consensus 231 ~A~~~~~~al~~~p 244 (365)
T 4eqf_A 231 RAIDAFNAALTVRP 244 (365)
T ss_dssp HHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999998754
No 53
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.35 E-value=4.5e-11 Score=113.13 Aligned_cols=169 Identities=14% Similarity=0.100 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
...++.+|..++.+|+|++|+.+|.+++.+. +.++....+||++|.+++..+.. .
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~lg~~~~~~~~~--------~------------ 106 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIY-----QIDPRVPQAEYERAMCYYKLSPP--------Y------------ 106 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHHHHHCCC--------T------------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-----CCCchhHHHHHHHHHHHHHhccc--------c------------
Confidence 5678999999999999999999999999972 44678899999999999986210 0
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
.-+.++++.|...|+.++.++-.
T Consensus 107 ---------------------------------------------------------~~~~~~~~~A~~~~~~~l~~~p~ 129 (261)
T 3qky_A 107 ---------------------------------------------------------ELDQTDTRKAIEAFQLFIDRYPN 129 (261)
T ss_dssp ---------------------------------------------------------TSCCHHHHHHHHHHHHHHHHCTT
T ss_pred ---------------------------------------------------------cccchhHHHHHHHHHHHHHHCcC
Confidence 01236788888888887766532
Q ss_pred hcCC----------cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC------
Q 011692 226 HWGD----------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------ 289 (479)
Q Consensus 226 ~~~~----------~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~------ 289 (479)
.... ...++..++.||.++..+|+|++|+..|++++.+. |+++....++++||.+|..+
T Consensus 130 ~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~~ 204 (261)
T 3qky_A 130 HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY-----PDTPWADDALVGAMRAYIAYAEQSVR 204 (261)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHHHHTSCG
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-----CCCchHHHHHHHHHHHHHHhcccchh
Confidence 2110 01234445999999999999999999999999864 46667889999999999977
Q ss_pred ----CChhHHHHHHHHHHHHH---------HHHHHHHHHHHhhhc
Q 011692 290 ----SKPQEAIPYCQKAISVC---------KSRVQRLLNEVKSLG 321 (479)
Q Consensus 290 ----g~~eeAi~~~ekAL~I~---------k~rl~~l~~~l~~~~ 321 (479)
+++++|+.+|++++... ...+..+...+....
T Consensus 205 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~ 249 (261)
T 3qky_A 205 ARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELE 249 (261)
T ss_dssp GGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999764 334555555555543
No 54
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.35 E-value=5.2e-11 Score=107.20 Aligned_cols=169 Identities=11% Similarity=0.016 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQ 141 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~ 141 (479)
..+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..++.+... +.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~------- 70 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRGQDYRQATASIEDALKS--------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALS------- 70 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHH-------
Confidence 34678899999999999999999999999997 6788899999999999875432110 000000
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCc-ChHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDE-SDLDLAWKMLDVAR 220 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~-~dle~Awe~Le~Ar 220 (479)
..+... .. . -..+...-.. ++++.|..+++.++
T Consensus 71 -----------~~~~~~------~~--------~---------------------~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (225)
T 2vq2_A 71 -----------IKPDSA------EI--------N---------------------NNYGWFLCGRLNRPAESMAYFDKAL 104 (225)
T ss_dssp -----------HCTTCH------HH--------H---------------------HHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred -----------hCCCCh------HH--------H---------------------HHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 000000 00 0 0000001123 45556655555554
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHH
Q 011692 221 AIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 300 (479)
Q Consensus 221 ~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~e 300 (479)
. ....+....+|..+|.++...|+|++|+..|++++.+. +++ ..+++.||.+|...|++++|+.+|+
T Consensus 105 ~-----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~la~~~~~~~~~~~A~~~~~ 171 (225)
T 2vq2_A 105 A-----DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ-----PQF---PPAFKELARTKMLAGQLGDADYYFK 171 (225)
T ss_dssp T-----STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred c-----CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCC---chHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3 11234566777777777777777777777777776652 222 4667777777777777777777777
Q ss_pred HHHHHH
Q 011692 301 KAISVC 306 (479)
Q Consensus 301 kAL~I~ 306 (479)
+++.+.
T Consensus 172 ~~~~~~ 177 (225)
T 2vq2_A 172 KYQSRV 177 (225)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 776653
No 55
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.34 E-value=1.4e-12 Score=117.35 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=72.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|+.++.+ .|..+.+|++||.++..+|+|++|+.+|++++.+... + +.+||+||.||
T Consensus 50 g~~~eA~~~~~~al~~-------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~-----~---~~~~~~lg~~~ 114 (151)
T 3gyz_A 50 GRIEEAEVFFRFLCIY-------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN-----D---YTPVFHTGQCQ 114 (151)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS-----C---CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC-----C---cHHHHHHHHHH
Confidence 4567777777777655 3566889999999999999999999999999998643 3 37899999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
..+|++++|+.+|+++|.+
T Consensus 115 ~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 115 LRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 9999999999999999976
No 56
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.33 E-value=4.8e-11 Score=97.78 Aligned_cols=131 Identities=27% Similarity=0.366 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCc
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~d 146 (479)
..++.+|..++..|+|++|..+|.+++++ +|....+|+.+|.+++..
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~------------------------- 48 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAEAWYNLGNAYYKQ------------------------- 48 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-------------------------
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc--------CCcchhHHHHHHHHHHHh-------------------------
Confidence 35778999999999999999999999987 567788999999998765
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011692 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 226 (479)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~ 226 (479)
++++.|..+++.++.+.
T Consensus 49 ------------------------------------------------------------~~~~~A~~~~~~~~~~~--- 65 (136)
T 2fo7_A 49 ------------------------------------------------------------GDYDEAIEYYQKALELD--- 65 (136)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHC---
T ss_pred ------------------------------------------------------------cCHHHHHHHHHHHHHHC---
Confidence 34667777777776542
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 227 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 227 ~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+....++..||.++...|+|++|+..|++++.+.. .+ ..+++.+|.+|...|++++|+.+|++++.+
T Consensus 66 ----~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 66 ----PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----RS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp ----TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred ----CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----CC---hHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 23467899999999999999999999999998632 22 578999999999999999999999999865
No 57
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.33 E-value=3.9e-11 Score=107.37 Aligned_cols=99 Identities=11% Similarity=0.068 Sum_probs=87.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+++.|+.++.+.. ..+..+.+|.+||.++..+|+|++|+.+|++++.+.+.. +.+....+.++++||.+|
T Consensus 40 g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~ 117 (203)
T 3gw4_A 40 DRFDEARASFQALQQQAQKSG-DHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASL-PEDPLAASANAYEVATVA 117 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHH
Confidence 467889999999999998764 456789999999999999999999999999999999853 434557899999999999
Q ss_pred HcCCChhHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k 307 (479)
...|++++|+.+|++++.+.+
T Consensus 118 ~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 118 LHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998854
No 58
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.33 E-value=3.3e-11 Score=110.74 Aligned_cols=125 Identities=18% Similarity=0.050 Sum_probs=105.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhC----CCChhHHHHHHHHHHHHHhhhhccCCcCCCCCC
Q 011692 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG----ELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (479)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~G----e~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~ 134 (479)
|-+....|..++++|..++..|+|++|+.+|.+|+++.-.... ...|..+.+|++.|.+|..+
T Consensus 4 ~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~L------------- 70 (159)
T 2hr2_A 4 PLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL------------- 70 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHT-------------
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHC-------------
Confidence 3455678999999999999999999999999999999644111 01233566999999999886
Q ss_pred CcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHH
Q 011692 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWK 214 (479)
Q Consensus 135 ~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe 214 (479)
++|+.|..
T Consensus 71 ------------------------------------------------------------------------gr~~eAl~ 78 (159)
T 2hr2_A 71 ------------------------------------------------------------------------RSFDEALH 78 (159)
T ss_dssp ------------------------------------------------------------------------TCHHHHHH
T ss_pred ------------------------------------------------------------------------CCHHHHHH
Confidence 45778999
Q ss_pred HHHHHHHHHHHhcCCcchHHHHH----HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Q 011692 215 MLDVARAIAEKHWGDSMEKVDIL----SALAEVALEREDIETSLSDYQKALTILERMV 268 (479)
Q Consensus 215 ~Le~Ar~Iyek~~~~~~~~A~v~----~~LGev~le~g~yeeAl~dy~kAL~I~~~ll 268 (479)
.++.|+.+|.+.+...+..+.+| +++|.++..+|+|++|+.+|++||+|...--
T Consensus 79 ~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 79 SADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999999888778888999 9999999999999999999999999987643
No 59
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.32 E-value=7.4e-11 Score=102.44 Aligned_cols=165 Identities=14% Similarity=0.120 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
+..+..+|..++..|+|++|+.+|.+++.+ +|....+|+.+|.+++..++.+... +.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~--------- 70 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDA--------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLA--------- 70 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCT--------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHh---------
Confidence 556777888888888888888888887764 5666778888888887764432210 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+... .. .. ..+...-..++++.|+++++.++.+.
T Consensus 71 ---------~~~~~~------~~--------~~---------------------~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 71 ---------DAPDNV------KV--------AT---------------------VLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp ---------HCTTCH------HH--------HH---------------------HHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ---------cCCCCH------HH--------HH---------------------HHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 000000 00 00 00000011245667777777666542
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
+....++..+|.++...|+|++|+..|++++.+.. ++ ..+++.||.+|...|++++|+.+|++++
T Consensus 107 -------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~ 171 (186)
T 3as5_A 107 -------PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP-----NE---GKVHRAIAFSYEQMGRHEEALPHFKKAN 171 (186)
T ss_dssp -------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -------cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc-----cc---hHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999998742 22 5889999999999999999999999998
Q ss_pred HHH
Q 011692 304 SVC 306 (479)
Q Consensus 304 ~I~ 306 (479)
.+.
T Consensus 172 ~~~ 174 (186)
T 3as5_A 172 ELD 174 (186)
T ss_dssp HHH
T ss_pred HcC
Confidence 763
No 60
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.32 E-value=4.1e-11 Score=111.10 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhh
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQ 123 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar 123 (479)
.+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+.+|.+++..++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~ 86 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEI--------DPSSADAHAALAVVFQTEME 86 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHHcCC
Confidence 4788999999999999999999999999998 67788999999999988643
No 61
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.32 E-value=9.5e-11 Score=116.02 Aligned_cols=153 Identities=16% Similarity=0.047 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA-LECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~-pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
.+..++.+|..++..|+|++|..+|.+++.+. .... ...+.+++.+|.+++..
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~~l~~~~~~~---------------------- 66 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCK---------------------- 66 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC----CTTCHHHHHHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC----CCCchhHHHHHHHHHHHHHHhc----------------------
Confidence 36677889999999999999999999999863 2222 23566888888888765
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|..+|+.|+.++
T Consensus 67 ---------------------------------------------------------------g~~~~A~~~~~~al~~~ 83 (373)
T 1hz4_A 67 ---------------------------------------------------------------GELTRSLALMQQTEQMA 83 (373)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CcHHHHHHHHHHHHHHH
Confidence 46778999999999998
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
.+.. .....+.++.+||.++...|+|++|+.+|+++|.+.+...++.++..+.+|++||.+|...|++++|+.+|++++
T Consensus 84 ~~~~-~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 162 (373)
T 1hz4_A 84 RQHD-VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGI 162 (373)
T ss_dssp HHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhcC-cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 7753 344568899999999999999999999999999999998877788899999999999999999999999999999
Q ss_pred HHHH
Q 011692 304 SVCK 307 (479)
Q Consensus 304 ~I~k 307 (479)
.+..
T Consensus 163 ~~~~ 166 (373)
T 1hz4_A 163 EVLS 166 (373)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8754
No 62
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.31 E-value=4.8e-11 Score=116.41 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=67.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcch--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSME--KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 284 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~--~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 284 (479)
++++.|..+|+.++.+ .+. .+.+|..||.++...|+|++|+..|++++.+. |..+.+|++||.
T Consensus 195 ~~~~~A~~~~~~a~~~-------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------~~~~~~~~~l~~ 259 (368)
T 1fch_A 195 SLFLEVKELFLAAVRL-------DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR--------PNDYLLWNKLGA 259 (368)
T ss_dssp HHHHHHHHHHHHHHHH-------STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh-------CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------cCCHHHHHHHHH
Confidence 4455555555544433 233 57899999999999999999999999999873 223578999999
Q ss_pred HHHcCCChhHHHHHHHHHHHHH
Q 011692 285 CLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 285 ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
+|...|++++|+.+|++++.+.
T Consensus 260 ~~~~~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 260 TLANGNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHHHHHhC
Confidence 9999999999999999998764
No 63
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.31 E-value=2.5e-11 Score=104.70 Aligned_cols=84 Identities=17% Similarity=0.145 Sum_probs=73.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++|+.|.+.|+.|+.+ .+..+.+|.++|.++..+|+|++|+.+|++||++... .+.+|++||.+|
T Consensus 27 g~~~~A~~~~~~al~~-------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~ 91 (126)
T 4gco_A 27 GDYPTAMRHYNEAVKR-------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK--------FIKGYIRKAACL 91 (126)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh--------hhHHHHHHHHHH
Confidence 4688888888888765 3456889999999999999999999999999998432 358999999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
..+|+|++|+.+|+++|++
T Consensus 92 ~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 92 VAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHH
Confidence 9999999999999999986
No 64
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.30 E-value=3.3e-11 Score=112.84 Aligned_cols=174 Identities=10% Similarity=-0.003 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
+..+..+|..++..|+|++|+.+|.+++++ +|..+.+|+.+|.+++..++.+..+ +-.+...
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-------- 137 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP-------- 137 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--------
Confidence 445778888888888888888888888886 6777788888888888776543221 0000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++... .. .. ..+..--...+++.|...|+.++.+
T Consensus 138 ----------~~~~~------~~--------~~---------------------~l~~~~~~~~~~~~A~~~~~~a~~~- 171 (272)
T 3u4t_A 138 ----------TTTDP------KV--------FY---------------------ELGQAYYYNKEYVKADSSFVKVLEL- 171 (272)
T ss_dssp ----------SCCCH------HH--------HH---------------------HHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred ----------CCCcH------HH--------HH---------------------HHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 00000 00 00 0000000012566666666666544
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 300 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~e 300 (479)
.+....+|..+|.++..+++ |++|+.+|++++.+......+....++.+|+.||.+|...|++++|+.+|+
T Consensus 172 ------~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 245 (272)
T 3u4t_A 172 ------KPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWK 245 (272)
T ss_dssp ------STTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ------CccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 23457899999999999999 999999999999998766543345578999999999999999999999999
Q ss_pred HHHHHHH
Q 011692 301 KAISVCK 307 (479)
Q Consensus 301 kAL~I~k 307 (479)
+++.+..
T Consensus 246 ~al~~~p 252 (272)
T 3u4t_A 246 NILALDP 252 (272)
T ss_dssp HHHHHCT
T ss_pred HHHhcCc
Confidence 9998743
No 65
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.29 E-value=2e-11 Score=128.05 Aligned_cols=175 Identities=17% Similarity=0.138 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCC
Q 011692 66 ADELMEKGTNALKESDY-GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQG 142 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdy-eeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~ 142 (479)
+..++.+|..++..|+| ++|+.+|.+|+++ .|..+.+|+++|.+|+..++.+... +-.+...
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~------- 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKL--------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH------- 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT-------
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------
Confidence 67789999999999999 9999999999998 7899999999999999987653321 0000000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
+ +.. .. ....+...... ......+..++++.|.+.|+.|+.+
T Consensus 167 -----------~---------p~~-~~-----~~~lg~~~~~~------------~~~~~~~~~g~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 167 -----------C---------KNK-VS-----LQNLSMVLRQL------------QTDSGDEHSRHVMDSVRQAKLAVQM 208 (474)
T ss_dssp -----------C---------CCH-HH-----HHHHHHHHTTC------------CCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------C---------CCH-HH-----HHHHHHHHHHh------------ccCChhhhhhhHHHHHHHHHHHHHh
Confidence 0 000 00 00000000000 0000012236778888777777765
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhc--------CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALER--------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 294 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~--------g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee 294 (479)
.+..+.+|.+||.+++.+ ++|++|+..|++++.+... ++..+.+|++||.+|..+|+|++
T Consensus 209 -------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~~~~~lg~~~~~~g~~~~ 276 (474)
T 4abn_A 209 -------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK-----ASSNPDLHLNRATLHKYEESYGE 276 (474)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG-----GGGCHHHHHHHHHHHHHTTCHHH
T ss_pred -------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC-----cccCHHHHHHHHHHHHHcCCHHH
Confidence 345678999999999999 9999999999999998431 23567999999999999999999
Q ss_pred HHHHHHHHHHH
Q 011692 295 AIPYCQKAISV 305 (479)
Q Consensus 295 Ai~~~ekAL~I 305 (479)
|+.+|++|+.+
T Consensus 277 A~~~~~~al~l 287 (474)
T 4abn_A 277 ALEGFSQAAAL 287 (474)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999975
No 66
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.29 E-value=5.3e-11 Score=119.30 Aligned_cols=145 Identities=15% Similarity=0.137 Sum_probs=115.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhC-------CCChhHHHHHHHHHHHHHhhhhccCCcCCCCCC
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG-------ELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~G-------e~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~ 134 (479)
....+..+..+|..++.+|+|++|+.+|.+|+++.-.... ...+..+.+|+++|.+|+.+
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------------- 209 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKL------------- 209 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHc-------------
Confidence 3456889999999999999999999999999998311100 01122379999999999875
Q ss_pred CcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHH
Q 011692 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWK 214 (479)
Q Consensus 135 ~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe 214 (479)
++++.|..
T Consensus 210 ------------------------------------------------------------------------g~~~~A~~ 217 (336)
T 1p5q_A 210 ------------------------------------------------------------------------QAFSAAIE 217 (336)
T ss_dssp ------------------------------------------------------------------------TCHHHHHH
T ss_pred ------------------------------------------------------------------------CCHHHHHH
Confidence 45777888
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH
Q 011692 215 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 294 (479)
Q Consensus 215 ~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee 294 (479)
.|+.|+.+. +..+.+|++||.++..+|+|++|+.+|+++|++.. + ...++++||.+|..++++++
T Consensus 218 ~~~~al~~~-------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-----~---~~~a~~~l~~~~~~~~~~~~ 282 (336)
T 1p5q_A 218 SCNKALELD-------SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP-----N---NKAAKTQLAVCQQRIRRQLA 282 (336)
T ss_dssp HHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----S---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-----C---CHHHHHHHHHHHHHHHHHHH
Confidence 888887762 34678999999999999999999999999999843 2 25799999999999999998
Q ss_pred H-HHHHHHHHHHH
Q 011692 295 A-IPYCQKAISVC 306 (479)
Q Consensus 295 A-i~~~ekAL~I~ 306 (479)
| ...|++.+..+
T Consensus 283 a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 283 REKKLYANMFERL 295 (336)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8 55777766543
No 67
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.28 E-value=9.1e-12 Score=111.85 Aligned_cols=157 Identities=11% Similarity=0.058 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCCC
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGSD 144 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~~ 144 (479)
..++.+|..++..|+|++|+.+|.+++++ +|..+.+++.+|.+|+..++.+..+ |-.....
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~--------- 69 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDE--------LQSRGDVKLAKADCLLETKQFELAQELLATIPLE--------- 69 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHH--------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG---------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc---------
Confidence 35788999999999999999999999998 7999999999999999886653321 1000000
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHH---HHH----
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWK---MLD---- 217 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe---~Le---- 217 (479)
.....+...+. +..
T Consensus 70 -----------------------------------------------------------~p~~~~~~~~~~~~~~~~~~~ 90 (176)
T 2r5s_A 70 -----------------------------------------------------------YQDNSYKSLIAKLELHQQAAE 90 (176)
T ss_dssp -----------------------------------------------------------GCCHHHHHHHHHHHHHHHHTS
T ss_pred -----------------------------------------------------------cCChHHHHHHHHHHHHhhccc
Confidence 00000000000 000
Q ss_pred -HHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHH
Q 011692 218 -VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAI 296 (479)
Q Consensus 218 -~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi 296 (479)
.|+..|++.+...|....+|+.||.++...|+|++|+..|+++|.+.... .-..++++||.+|..+|++++|+
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~------~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA------QDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT------TTTHHHHHHHHHHHHHCSSCHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc------ChHHHHHHHHHHHHHhCCCCcHH
Confidence 12333443333345668999999999999999999999999998874321 11368999999999999999999
Q ss_pred HHHHHHHHH
Q 011692 297 PYCQKAISV 305 (479)
Q Consensus 297 ~~~ekAL~I 305 (479)
.+|+++|..
T Consensus 165 ~~y~~al~~ 173 (176)
T 2r5s_A 165 SKYRRQLYS 173 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999865
No 68
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.28 E-value=4e-11 Score=117.06 Aligned_cols=162 Identities=12% Similarity=0.079 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCC--cCCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEAD--PLVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esd--vLG~~~~~~~e~~~~~ 143 (479)
...++.+|..++..|+|++|+.+|.+++++ +|.++.+++.+|.+|+..++.+.. .|...+..
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~-------- 180 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQL--------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ-------- 180 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG--------
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHh--------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh--------
Confidence 567899999999999999999999999998 899999999999999998765332 11111000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHH-----HH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKML-----DV 218 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~L-----e~ 218 (479)
. . +.....+..+..++ +.
T Consensus 181 ---------------------------------~------p------------------~~~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 181 ---------------------------------D------Q------------------DTRYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp ---------------------------------G------C------------------SHHHHHHHHHHHHHHHHTSCH
T ss_pred ---------------------------------h------c------------------chHHHHHHHHHHHHhhcccCc
Confidence 0 0 00000111111110 11
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHH
Q 011692 219 ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPY 298 (479)
Q Consensus 219 Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~ 298 (479)
|...|++.+...|...++|++||.++...|+|++|+..|+++|++.... .-+.++.+||.+|...|++++|+.+
T Consensus 204 a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~------~~~~a~~~l~~~~~~~g~~~~a~~~ 277 (287)
T 3qou_A 204 EIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA------ADGQTRXTFQEILAALGTGDALASX 277 (287)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG------GGGHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc------ccchHHHHHHHHHHHcCCCCcHHHH
Confidence 3334444433356678899999999999999999999999999985432 1258899999999999999999999
Q ss_pred HHHHHHHH
Q 011692 299 CQKAISVC 306 (479)
Q Consensus 299 ~ekAL~I~ 306 (479)
|+++|..+
T Consensus 278 ~r~al~~~ 285 (287)
T 3qou_A 278 YRRQLYAL 285 (287)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998754
No 69
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.28 E-value=4.2e-11 Score=114.21 Aligned_cols=172 Identities=13% Similarity=0.101 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcC--CCCCCCcCCCCCC
Q 011692 66 ADELMEKGTNALKES-DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPL--VSVPKKEGDSQQG 142 (479)
Q Consensus 66 A~~L~~~G~~~~~~g-dyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvL--G~~~~~~~e~~~~ 142 (479)
...++.+|..++..| +|++|+.+|.+++++ .|..+.+|+.+|.+++..++.+..+- -....
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-------- 153 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTL--------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQ-------- 153 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTT--------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHH--------
Confidence 567889999999999 999999999999986 68888899999999998865532210 00000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
..+... .. .. ..+...-..++++.|.++|+.++
T Consensus 154 ----------~~~~~~------~~--------~~---------------------~l~~~~~~~~~~~~A~~~~~~al-- 186 (330)
T 3hym_B 154 ----------LMKGCH------LP--------ML---------------------YIGLEYGLTNNSKLAERFFSQAL-- 186 (330)
T ss_dssp ----------HTTTCS------HH--------HH---------------------HHHHHHHHTTCHHHHHHHHHHHH--
T ss_pred ----------hccccH------HH--------HH---------------------HHHHHHHHHhhHHHHHHHHHHHH--
Confidence 000000 00 00 00000011244555555554444
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC-hhHHHHHHHHHHHHHcCCChhHHHHHHHH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDS-RHIAELNFRICLCLEIGSKPQEAIPYCQK 301 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~-r~iAea~~~LG~ay~~~g~~eeAi~~~ek 301 (479)
...+....++..||.++...|+|++|+..|++++.+.+....... +..+.+|++||.+|...|++++|+.+|++
T Consensus 187 -----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 261 (330)
T 3hym_B 187 -----SIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQ 261 (330)
T ss_dssp -----TTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----HhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 334556789999999999999999999999999999877655433 45578999999999999999999999999
Q ss_pred HHHH
Q 011692 302 AISV 305 (479)
Q Consensus 302 AL~I 305 (479)
++.+
T Consensus 262 a~~~ 265 (330)
T 3hym_B 262 ALVL 265 (330)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9976
No 70
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.28 E-value=3.8e-11 Score=112.04 Aligned_cols=53 Identities=25% Similarity=0.119 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhc
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~ 124 (479)
..+..++.+|..++..|+|++|+.+|.+++++ +|....+|+.+|.+++..++.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~ 93 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMPEVFNYLGIYLTQAGNF 93 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHccCH
Confidence 35778899999999999999999999999998 788889999999999987543
No 71
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.28 E-value=2.1e-10 Score=96.53 Aligned_cols=122 Identities=16% Similarity=0.092 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..++.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+++.+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~a~~~~~~----------------------- 51 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKL----------------------- 51 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHh-----------------------
Confidence 4788999999999999999999999999998 788999999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|...|+.++.+.
T Consensus 52 --------------------------------------------------------------~~~~~A~~~~~~al~~~- 68 (126)
T 3upv_A 52 --------------------------------------------------------------MSFPEAIADCNKAIEKD- 68 (126)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHhC-
Confidence 35777888888887652
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 288 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~ 288 (479)
+....+|..||.++..+|+|++|+.+|++++.+..... ..|.-..++..|+.++..
T Consensus 69 ------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 69 ------PNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHHH
T ss_pred ------CCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999986654 233345666667666543
No 72
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=5.8e-11 Score=117.97 Aligned_cols=168 Identities=15% Similarity=0.135 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+|+..++.+..+--. .
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~--~----------- 125 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRL--------KPDFIDGYINLAAALVAAGDMEGAVQAY--V----------- 125 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHSCSSHHHHHH--H-----------
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHc--------CcchHHHHHHHHHHHHHcCCHHHHHHHH--H-----------
Confidence 456778888888888888888888888876 6777888888888888775442210000 0
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
.... .++... .. . -..+......++++.|.++|+.++.+
T Consensus 126 -~al~--~~p~~~------~~--------~---------------------~~l~~~~~~~g~~~~A~~~~~~al~~--- 164 (388)
T 1w3b_A 126 -SALQ--YNPDLY------CV--------R---------------------SDLGNLLKALGRLEEAKACYLKAIET--- 164 (388)
T ss_dssp -HHHH--HCTTCT------HH--------H---------------------HHHHHHHHTTSCHHHHHHHHHHHHHH---
T ss_pred -HHHH--hCCCcH------HH--------H---------------------HHHHHHHHHccCHHHHHHHHHHHHHh---
Confidence 0000 000000 00 0 00000012236677777777766643
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.+..+.+|.+||.++...|+|++|+..|++++.+. |....+|++||.+|...+++++|+.+|++++.+
T Consensus 165 ----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 232 (388)
T 1w3b_A 165 ----QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD--------PNFLDAYINLGNVLKEARIFDRAVAAYLRALSL 232 (388)
T ss_dssp ----CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34568899999999999999999999999999873 233689999999999999999999999999987
Q ss_pred HH
Q 011692 306 CK 307 (479)
Q Consensus 306 ~k 307 (479)
..
T Consensus 233 ~p 234 (388)
T 1w3b_A 233 SP 234 (388)
T ss_dssp CT
T ss_pred Cc
Confidence 54
No 73
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.27 E-value=5.9e-11 Score=103.10 Aligned_cols=84 Identities=15% Similarity=0.154 Sum_probs=70.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|+.++.+ .+....++..+|.++...|+|++|+..|++++.+.. + ...+++.+|.+|
T Consensus 56 ~~~~~A~~~~~~~~~~-------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~---~~~~~~~~a~~~ 120 (186)
T 3as5_A 56 GAVDRGTELLERSLAD-------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP-----I---NFNVRFRLGVAL 120 (186)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc-----H---hHHHHHHHHHHH
Confidence 5677777777777654 234578999999999999999999999999998732 2 257899999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
...|++++|+.+|++++.+
T Consensus 121 ~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHHHHhc
Confidence 9999999999999999875
No 74
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.27 E-value=1.8e-11 Score=114.67 Aligned_cols=168 Identities=12% Similarity=0.098 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCC--CCCCCcCCCCCCCC
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLV--SVPKKEGDSQQGSD 144 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG--~~~~~~~e~~~~~~ 144 (479)
..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+..+-- .....
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------- 66 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAK--------KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK--------- 66 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHT--------TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT---------
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc---------
Confidence 46789999999999999999999999987 677778999999999988655332100 00000
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
+... ...... . -..+..--..++++.|.+.|+.++.+
T Consensus 67 ----------~~~~----------------~~~~~~-~--------------~~lg~~~~~~~~~~~A~~~~~~a~~~-- 103 (272)
T 3u4t_A 67 ----------VNAT----------------KAKSAD-F--------------EYYGKILMKKGQDSLAIQQYQAAVDR-- 103 (272)
T ss_dssp ----------SCTT----------------TCCHHH-H--------------HHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred ----------cCch----------------hHHHHH-H--------------HHHHHHHHHcccHHHHHHHHHHHHhc--
Confidence 0000 000000 0 00000011235666666666666543
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHcCCChhHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~g~~eeAi~~~ekAL 303 (479)
.+..+.+|..||.++..+|+|++|+..|++++.+ ++....++++|| .+|. .+++++|+.+|++++
T Consensus 104 -----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~ 169 (272)
T 3u4t_A 104 -----DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--------TTTDPKVFYELGQAYYY-NKEYVKADSSFVKVL 169 (272)
T ss_dssp -----STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--------SCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred -----CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--------CCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999987 333468999999 6555 459999999999999
Q ss_pred HHHHH
Q 011692 304 SVCKS 308 (479)
Q Consensus 304 ~I~k~ 308 (479)
.+...
T Consensus 170 ~~~p~ 174 (272)
T 3u4t_A 170 ELKPN 174 (272)
T ss_dssp HHSTT
T ss_pred HhCcc
Confidence 98654
No 75
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.26 E-value=8e-11 Score=112.10 Aligned_cols=144 Identities=13% Similarity=0.094 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~------------------------ 219 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVEL--------RPDDAQLWNKLGATLANG------------------------ 219 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc------------------------
Confidence 456777888888888888888888888877 577778888888888764
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|..+|+.++.+.
T Consensus 220 -------------------------------------------------------------~~~~~A~~~~~~a~~~~-- 236 (327)
T 3cv0_A 220 -------------------------------------------------------------NRPQEALDAYNRALDIN-- 236 (327)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHcC--
Confidence 35677888887776642
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh----hHHHHHHHHHHHHHcCCChhHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR----HIAELNFRICLCLEIGSKPQEAIPYCQK 301 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r----~iAea~~~LG~ay~~~g~~eeAi~~~ek 301 (479)
+....+|..||.++...|+|++|+..|++++.+........+. ....++++||.+|...|++++|+.+|++
T Consensus 237 -----~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 311 (327)
T 3cv0_A 237 -----PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQ 311 (327)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3456799999999999999999999999999998664333322 2689999999999999999999999999
Q ss_pred HHHHHHHH
Q 011692 302 AISVCKSR 309 (479)
Q Consensus 302 AL~I~k~r 309 (479)
++.+++..
T Consensus 312 ~l~~~~~~ 319 (327)
T 3cv0_A 312 NVEPFAKE 319 (327)
T ss_dssp CSHHHHHH
T ss_pred HHHhcchh
Confidence 99987654
No 76
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.26 E-value=2.9e-11 Score=115.39 Aligned_cols=172 Identities=13% Similarity=0.092 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...++.+|..++..|+|++|+.+|.+++++ .|....+++.+|.+++..++.+... +-....
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~--------- 187 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQL--------MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALS--------- 187 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHT---------
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHH---------
Confidence 456889999999999999999999999998 5777889999999999876543210 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+... .. . -..+...-..++++.|..+|+.++.++
T Consensus 188 ---------~~~~~~------~~--------~---------------------~~l~~~~~~~~~~~~A~~~~~~a~~~~ 223 (330)
T 3hym_B 188 ---------IAPEDP------FV--------M---------------------HEVGVVAFQNGEWKTAEKWFLDALEKI 223 (330)
T ss_dssp ---------TCTTCH------HH--------H---------------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ---------hCCCCh------HH--------H---------------------HHHHHHHHHcccHHHHHHHHHHHHHHh
Confidence 000000 00 0 000000122468889999999999888
Q ss_pred HHhcCC--cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHH
Q 011692 224 EKHWGD--SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 301 (479)
Q Consensus 224 ek~~~~--~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ek 301 (479)
.+.... .+..+.+|..||.++...|+|++|+..|++++.+... .+.+|++||.+|...|++++|+.+|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~--------~~~~~~~la~~~~~~g~~~~A~~~~~~ 295 (330)
T 3hym_B 224 KAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ--------NASTYSAIGYIHSLMGNFENAVDYFHT 295 (330)
T ss_dssp TTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CSHHHHHHHHHHHHHTCHHHHHHHHHT
T ss_pred hhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc--------chHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 665432 2455789999999999999999999999999988432 358899999999999999999999999
Q ss_pred HHHHH
Q 011692 302 AISVC 306 (479)
Q Consensus 302 AL~I~ 306 (479)
++.+.
T Consensus 296 al~~~ 300 (330)
T 3hym_B 296 ALGLR 300 (330)
T ss_dssp TTTTC
T ss_pred HHccC
Confidence 98764
No 77
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.25 E-value=2.3e-10 Score=104.74 Aligned_cols=165 Identities=13% Similarity=0.113 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+... +-....
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~--------- 119 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALEL--------DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALR--------- 119 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHH---------
Confidence 678889999999999999999999999988 6778899999999999875542210 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+... ..- -..+...-..++++.|..+|+.++.+.
T Consensus 120 ---------~~~~~~------~~~-----------------------------~~~a~~~~~~~~~~~A~~~~~~~~~~~ 155 (243)
T 2q7f_A 120 ---------AGMENG------DLF-----------------------------YMLGTVLVKLEQPKLALPYLQRAVELN 155 (243)
T ss_dssp ---------HTCCSH------HHH-----------------------------HHHHHHHHHTSCHHHHHHHHHHHHHHC
T ss_pred ---------hCCCCH------HHH-----------------------------HHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 000000 000 000000112356777777777666542
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
+....++..||.++...|+|++|+..|++++.+.. + .+.+++.||.+|...|++++|+.+|++++
T Consensus 156 -------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 220 (243)
T 2q7f_A 156 -------ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDP-----G---HADAFYNAGVTYAYKENREKALEMLDKAI 220 (243)
T ss_dssp -------TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHTTCTTHHHHHHHHHH
T ss_pred -------CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----c---cHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 23467899999999999999999999999988732 2 25789999999999999999999999998
Q ss_pred HHH
Q 011692 304 SVC 306 (479)
Q Consensus 304 ~I~ 306 (479)
.+.
T Consensus 221 ~~~ 223 (243)
T 2q7f_A 221 DIQ 223 (243)
T ss_dssp HHC
T ss_pred ccC
Confidence 764
No 78
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.24 E-value=7.2e-11 Score=117.27 Aligned_cols=164 Identities=19% Similarity=0.192 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...+..+|..+...|+|++|+.+|.+++.+ +|....+|+++|.+++..++.+... +-....
T Consensus 203 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~--------- 265 (388)
T 1w3b_A 203 LDAYINLGNVLKEARIFDRAVAAYLRALSL--------SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE--------- 265 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---------
Confidence 667899999999999999999999999998 7888999999999999886543211 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
.++... ..- -..+..-...++++.|+++|+.++.+
T Consensus 266 ---------~~p~~~------~~~-----------------------------~~l~~~~~~~g~~~~A~~~~~~al~~- 300 (388)
T 1w3b_A 266 ---------LQPHFP------DAY-----------------------------CNLANALKEKGSVAEAEDCYNTALRL- 300 (388)
T ss_dssp ---------TCSSCH------HHH-----------------------------HHHHHHHHHHSCHHHHHHHHHHHHHH-
T ss_pred ---------hCCCCH------HHH-----------------------------HHHHHHHHHcCCHHHHHHHHHHHHhh-
Confidence 000000 000 00000011235677777777777654
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
.+..+.+|..||.++...|+|++|+..|++++.+. |..+.+|++||.+|...|++++|+.+|++++
T Consensus 301 ------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 366 (388)
T 1w3b_A 301 ------CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF--------PEFAAAHSNLASVLQQQGKLQEALMHYKEAI 366 (388)
T ss_dssp ------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC--------TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred ------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 23457899999999999999999999999998752 3346899999999999999999999999998
Q ss_pred HH
Q 011692 304 SV 305 (479)
Q Consensus 304 ~I 305 (479)
.+
T Consensus 367 ~~ 368 (388)
T 1w3b_A 367 RI 368 (388)
T ss_dssp TT
T ss_pred hh
Confidence 65
No 79
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.24 E-value=5.5e-11 Score=105.21 Aligned_cols=86 Identities=10% Similarity=0.076 Sum_probs=72.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|+.+..+ .+..+.+|+.||.++..+|+|++|+..|++++.+.. ++ +.+|++||.+|
T Consensus 35 g~~~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-----~~---~~~~~~lg~~~ 99 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVL-------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI-----XE---PRFPFHAAECL 99 (148)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC---THHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHc-------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----CC---chHHHHHHHHH
Confidence 4577787777777654 345678999999999999999999999999999853 33 47899999999
Q ss_pred HcCCChhHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k 307 (479)
..+|++++|+.+|++++.+..
T Consensus 100 ~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 100 LQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHHCc
Confidence 999999999999999998753
No 80
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.24 E-value=1.9e-10 Score=106.62 Aligned_cols=134 Identities=16% Similarity=0.097 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~------------------------ 118 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALAS--------DSRNARVLNNYGGFLYEQ------------------------ 118 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHH------------------------
Confidence 456788999999999999999999999998 677889999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|.++|+.++.
T Consensus 119 -------------------------------------------------------------g~~~~A~~~~~~~~~---- 133 (252)
T 2ho1_A 119 -------------------------------------------------------------KRYEEAYQRLLEASQ---- 133 (252)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHTT----
T ss_pred -------------------------------------------------------------hHHHHHHHHHHHHHh----
Confidence 345556666655543
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
....+....++..||.++...|+|++|+..|++++.+.. . ...+++.||.+|...|++++|+.+|++++.+
T Consensus 134 -~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-----~---~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 204 (252)
T 2ho1_A 134 -DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNR-----N---QPSVALEMADLLYKEREYVPARQYYDLFAQG 204 (252)
T ss_dssp -CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----C---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred -CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc-----c---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 113456778888889999899999999988888887632 2 2577888888888888888888888887753
No 81
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.24 E-value=1.2e-10 Score=102.65 Aligned_cols=112 Identities=16% Similarity=0.125 Sum_probs=92.8
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCC----------ChhHHHHHHHHHHHHHhhhhccCCcCC
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGEL----------ALECVNAYYQYGRALLYKAQEEADPLV 130 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~----------~pe~A~~y~~YG~ALl~~ar~esdvLG 130 (479)
..++.+..|..+|..++..|+|++|+.+|.+|+++........ .|..+.+|+++|.+|+.+
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--------- 76 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI--------- 76 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 4567799999999999999999999999999999976654321 567788999999999876
Q ss_pred CCCCCcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHH
Q 011692 131 SVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLD 210 (479)
Q Consensus 131 ~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle 210 (479)
++++
T Consensus 77 ----------------------------------------------------------------------------~~~~ 80 (162)
T 3rkv_A 77 ----------------------------------------------------------------------------GDLH 80 (162)
T ss_dssp ----------------------------------------------------------------------------TCHH
T ss_pred ----------------------------------------------------------------------------CcHH
Confidence 3567
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 211 LAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 211 ~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
.|...++.|+.+ .+..+.+|+.+|.++..+|+|++|+.+|+++|.+.
T Consensus 81 ~A~~~~~~al~~-------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 81 EAEETSSEVLKR-------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc-------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 788777777765 24567899999999999999999999999999984
No 82
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.24 E-value=4.5e-11 Score=123.19 Aligned_cols=135 Identities=8% Similarity=-0.038 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 66 ADELMEKGTNALKESD-YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 66 A~~L~~~G~~~~~~gd-yeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
+..++.+|..++.+|+ |++|+.+|.+|+++ +|....+|+++|.+|..++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l--------~P~~~~a~~~~g~~~~~~g---------------------- 180 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEE--------QPKNYQVWHHRRVLVEWLR---------------------- 180 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcc----------------------
Confidence 5678899999999997 99999999999998 8999999999999999872
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
+++.|...|+.|+.+
T Consensus 181 ---------------------------------------------------------------~~~eAl~~~~kal~l-- 195 (382)
T 2h6f_A 181 ---------------------------------------------------------------DPSQELEFIADILNQ-- 195 (382)
T ss_dssp ---------------------------------------------------------------CCTTHHHHHHHHHHH--
T ss_pred ---------------------------------------------------------------CHHHHHHHHHHHHHh--
Confidence 122355666666554
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc-CCChhHH-----HHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI-GSKPQEA-----IPY 298 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~-~g~~eeA-----i~~ 298 (479)
.+....+|++||.++..+|+|++|+.+|+++|++... -+.+|+++|.+|.. .+.+++| +.+
T Consensus 196 -----dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~--------~~~a~~~lg~~l~~l~~~~~eA~~~~el~~ 262 (382)
T 2h6f_A 196 -----DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR--------NNSVWNQRYFVISNTTGYNDRAVLEREVQY 262 (382)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCSCSHHHHHHHHHH
T ss_pred -----CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 3566889999999999999999999999999998543 36899999999999 5555888 599
Q ss_pred HHHHHHHHHH
Q 011692 299 CQKAISVCKS 308 (479)
Q Consensus 299 ~ekAL~I~k~ 308 (479)
|++||.+-..
T Consensus 263 ~~~Al~l~P~ 272 (382)
T 2h6f_A 263 TLEMIKLVPH 272 (382)
T ss_dssp HHHHHHHSTT
T ss_pred HHHHHHHCCC
Confidence 9999987543
No 83
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.23 E-value=4.1e-10 Score=111.44 Aligned_cols=153 Identities=7% Similarity=0.007 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..++.+|..++..|+|++|..+|.+++.+... .|. ....+.+++++|.+++..
T Consensus 51 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~-~~~~~~~~~~la~~~~~~---------------------- 106 (373)
T 1hz4_A 51 SRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQ-HDV-WHYALWSLIQQSEILFAQ---------------------- 106 (373)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh-cCc-HHHHHHHHHHHHHHHHHC----------------------
Confidence 34667889999999999999999999999998665 332 234567788888888764
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|...++.++.++
T Consensus 107 ---------------------------------------------------------------G~~~~A~~~~~~al~~~ 123 (373)
T 1hz4_A 107 ---------------------------------------------------------------GFLQTAWETQEKAFQLI 123 (373)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHHHH
Confidence 46888999999999999
Q ss_pred HHhcCC-cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 224 EKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 224 ek~~~~-~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
.+.... .+..+.+|.+||.++...|+|++|+.+|++++.+.+... ++..+.+|++||.+|...|++++|+.+|+++
T Consensus 124 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a 200 (373)
T 1hz4_A 124 NEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ---PQQQLQCLAMLIQCSLARGDLDNARSQLNRL 200 (373)
T ss_dssp HHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC---GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccC---cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 876543 356889999999999999999999999999999987642 2335689999999999999999999999999
Q ss_pred HHHH
Q 011692 303 ISVC 306 (479)
Q Consensus 303 L~I~ 306 (479)
+.+.
T Consensus 201 ~~~~ 204 (373)
T 1hz4_A 201 ENLL 204 (373)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 84
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.22 E-value=3.7e-10 Score=103.33 Aligned_cols=166 Identities=19% Similarity=0.168 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcC--CCCCCCcCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPL--VSVPKKEGDSQQG 142 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvL--G~~~~~~~e~~~~ 142 (479)
.+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+...- -....
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~-------- 85 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEE--------NKEDAIPYINFANLLSSVNELERALAFYDKALE-------- 85 (243)
T ss_dssp --------------------CCTTHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------
Confidence 4778999999999999999999999999985 68889999999999998755422110 00000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
..+... .. .. ..+...-..++++.|..+|+.++.+
T Consensus 86 ----------~~~~~~------~~--------~~---------------------~la~~~~~~~~~~~A~~~~~~~~~~ 120 (243)
T 2q7f_A 86 ----------LDSSAA------TA--------YY---------------------GAGNVYVVKEMYKEAKDMFEKALRA 120 (243)
T ss_dssp ----------HCTTCH------HH--------HH---------------------HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----------cCCcch------HH--------HH---------------------HHHHHHHHhccHHHHHHHHHHHHHh
Confidence 000000 00 00 0000001235667777776666654
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
. +....++..+|.++...|+|++|+..|++++.+... ...+++.+|.+|...|++++|+.+|+++
T Consensus 121 ~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 185 (243)
T 2q7f_A 121 G-------MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN--------DTEARFQFGMCLANEGMLDEALSQFAAV 185 (243)
T ss_dssp T-------CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred C-------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc--------cHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3 234678999999999999999999999999887332 2468899999999999999999999998
Q ss_pred HHHH
Q 011692 303 ISVC 306 (479)
Q Consensus 303 L~I~ 306 (479)
+.+.
T Consensus 186 ~~~~ 189 (243)
T 2q7f_A 186 TEQD 189 (243)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8753
No 85
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.22 E-value=2.1e-10 Score=101.30 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..|+.+|..++..|+|++|+.+|.+++++ .|..+.+|+++|.+|+.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~---------------------- 58 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSI--------APANPIYLSNRAAAYSAS---------------------- 58 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT----------------------
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHHc----------------------
Confidence 45889999999999999999999999999998 788999999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|...|+.++.+.
T Consensus 59 ---------------------------------------------------------------g~~~~A~~~~~~al~~~ 75 (164)
T 3sz7_A 59 ---------------------------------------------------------------GQHEKAAEDAELATVVD 75 (164)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------------------------------cCHHHHHHHHHHHHHhC
Confidence 45777888888887763
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 266 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ 266 (479)
+....+|++||.++..+|+|++|+.+|+++|.+...
T Consensus 76 -------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 111 (164)
T 3sz7_A 76 -------PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGN 111 (164)
T ss_dssp -------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSS
T ss_pred -------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 345789999999999999999999999999998743
No 86
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.22 E-value=4.3e-10 Score=101.10 Aligned_cols=167 Identities=13% Similarity=0.019 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh-hhccCCc--CCCCCCCcCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK-AQEEADP--LVSVPKKEGDSQQG 142 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~-ar~esdv--LG~~~~~~~e~~~~ 142 (479)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++.. ++.+... +-....
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~-------- 105 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSI--------KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA-------- 105 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT--------
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc--------
Confidence 456788999999999999999999999997 677889999999999987 6543221 000000
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
.+.. ...... - -..+......++++.|..+|+.++.+
T Consensus 106 -----------~~~~-----------------~~~~~~---~------------~~l~~~~~~~~~~~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 106 -----------DPTY-----------------PTPYIA---N------------LNKGICSAKQGQFGLAEAYLKRSLAA 142 (225)
T ss_dssp -----------STTC-----------------SCHHHH---H------------HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -----------CcCC-----------------cchHHH---H------------HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 0000 000000 0 00000011235667777666666543
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
.+....++..||.++...|+|++|+..|++++.+.. .++ ...++.++.++...+++++|..+++.+
T Consensus 143 -------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~~ 208 (225)
T 2vq2_A 143 -------QPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE----VLQ---ADDLLLGWKIAKALGNAQAAYEYEAQL 208 (225)
T ss_dssp -------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC----SCC---HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CCC---HHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 234578999999999999999999999999998753 123 466889999999999999999988887
Q ss_pred HHH
Q 011692 303 ISV 305 (479)
Q Consensus 303 L~I 305 (479)
+.+
T Consensus 209 ~~~ 211 (225)
T 2vq2_A 209 QAN 211 (225)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 87
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.20 E-value=2.4e-10 Score=121.26 Aligned_cols=133 Identities=14% Similarity=0.042 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..+..+|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+|+..
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~------------------------ 70 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLAL--------HPGHPEAVARLGRVRWTQ------------------------ 70 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--------STTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHC------------------------
Confidence 567899999999999999999999999997 788999999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|.+.|+.|+.+.
T Consensus 71 -------------------------------------------------------------g~~~~A~~~~~~al~~~-- 87 (568)
T 2vsy_A 71 -------------------------------------------------------------QRHAEAAVLLQQASDAA-- 87 (568)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHhcC--
Confidence 35777888888887652
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC---CChhHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG---SKPQEAIPYCQKA 302 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~---g~~eeAi~~~ekA 302 (479)
+....+|.+||.++..+|+|++|+..|++++++.. ....+|++||.+|..+ +++++|+.+|+++
T Consensus 88 -----p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~a 154 (568)
T 2vsy_A 88 -----PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP--------EEPYITAQLLNWRRRLCDWRALDVLSAQVRAA 154 (568)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 34578999999999999999999999999999843 2258999999999999 9999999999999
Q ss_pred HHHH
Q 011692 303 ISVC 306 (479)
Q Consensus 303 L~I~ 306 (479)
+.+.
T Consensus 155 l~~~ 158 (568)
T 2vsy_A 155 VAQG 158 (568)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 9875
No 88
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.19 E-value=2.5e-10 Score=104.86 Aligned_cols=98 Identities=19% Similarity=0.124 Sum_probs=79.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC-----CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHH--
Q 011692 207 SDLDLAWKMLDVARAIAEKHWG-----DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELN-- 279 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~-----~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~-- 279 (479)
++|+.|.+.|+.|+.+--..+. ..+..+.+|.++|.++..+|+|++|+.+|.+||+|+.... +-+|.-+.+|
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~-e~~pd~~~A~~~ 103 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRG-ELNQDEGKLWIS 103 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC-CTTSTHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc-cCCCchHHHHHH
Confidence 4678888888888887644221 1123466999999999999999999999999999955443 2344557788
Q ss_pred --HHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 280 --FRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 280 --~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
|++|.+|..+|+|++|+.+|++||++
T Consensus 104 ~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 104 AVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987
No 89
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.18 E-value=6.9e-10 Score=93.75 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=87.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+++.++.++.+.. .....+.++..||.++..+|+|++|+.+|++++.+.+.. .+.+..+.++++||.+|
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~ 99 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFG-DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTY 99 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHH
Confidence 467889999999999988764 345678999999999999999999999999999999876 35667899999999999
Q ss_pred HcCCChhHHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
...+++++|+.+|++++.+.+.
T Consensus 100 ~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 100 TLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988543
No 90
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.18 E-value=7e-10 Score=106.44 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~~a~~~~~~------------------------ 50 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG--------DPDNYIAYYRRATVFLAM------------------------ 50 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHHc------------------------
Confidence 578899999999999999999999999997 788889999999999876
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|...|+.++.+
T Consensus 51 -------------------------------------------------------------~~~~~A~~~~~~~~~~--- 66 (359)
T 3ieg_A 51 -------------------------------------------------------------GKSKAALPDLTKVIAL--- 66 (359)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHH---
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHh---
Confidence 3567788888877765
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH------------HHHHHHHcCCChh
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNF------------RICLCLEIGSKPQ 293 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~------------~LG~ay~~~g~~e 293 (479)
.+....+|..||.++...|+|++|+..|++++.+.. .......+++ .+|.+|...|+++
T Consensus 67 ----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 137 (359)
T 3ieg_A 67 ----KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNP-----SEQEEKEAESQLVKADEMQRLRSQALDAFDGADYT 137 (359)
T ss_dssp ----CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ----CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCC-----cccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHH
Confidence 234568999999999999999999999999987633 0002234444 4489999999999
Q ss_pred HHHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISVC 306 (479)
Q Consensus 294 eAi~~~ekAL~I~ 306 (479)
+|+.+|++++.+.
T Consensus 138 ~A~~~~~~~~~~~ 150 (359)
T 3ieg_A 138 AAITFLDKILEVC 150 (359)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998764
No 91
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.18 E-value=9.1e-10 Score=90.21 Aligned_cols=124 Identities=13% Similarity=0.099 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCC
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~ 141 (479)
....+..++.+|..++..|+|++|+.+|.+++.+ +|..+.+|+.+|.+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~-------------------- 59 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKL-------------------- 59 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT--------------------
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHh--------------------
Confidence 3456889999999999999999999999999997 677889999999999865
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~ 221 (479)
++++.|.++++.++.
T Consensus 60 -----------------------------------------------------------------~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 60 -----------------------------------------------------------------GNYAGAVQDCERAIC 74 (131)
T ss_dssp -----------------------------------------------------------------TCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------hchHHHHHHHHHHHh
Confidence 356678888877776
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChh
Q 011692 222 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 293 (479)
Q Consensus 222 Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~e 293 (479)
+. +....+|..+|.++..+|+|++|+..|++++.+.. ++ ..+++.||.+|...++++
T Consensus 75 ~~-------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p-----~~---~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 75 ID-------PAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP-----DN---ETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHHHTTCC
T ss_pred cC-------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc-----cc---hHHHHHHHHHHHHHhcCC
Confidence 42 33477999999999999999999999999998832 22 478999999999888763
No 92
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=5.3e-10 Score=114.73 Aligned_cols=56 Identities=14% Similarity=0.263 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhc
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~ 124 (479)
.....+..|+.+|..++..|+|++|+.+|.+++++ .|..+.+|+.+|.+++..++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~ 75 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL--------DPNEPVFYSNISACYISTGDL 75 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh--------CCCCcHHHHHHHHHHHHcCCH
Confidence 34457899999999999999999999999999998 788999999999999987543
No 93
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=1.2e-10 Score=118.34 Aligned_cols=143 Identities=11% Similarity=-0.003 Sum_probs=118.6
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCCCC
Q 011692 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (479)
Q Consensus 78 ~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (479)
..++++.++..+.+.+....+.. .++..+.+|+++|.+++.+
T Consensus 23 ~l~~~~~~l~~~e~~~~~~~~~~--~~~~~a~~yn~Lg~~~~~~------------------------------------ 64 (472)
T 4g1t_A 23 NLMEGENSLDDFEDKVFYRTEFQ--NREFKATMCNLLAYLKHLK------------------------------------ 64 (472)
T ss_dssp CTTTTCCCHHHHHHHHHHHTTSC--C---CCHHHHHHHHHHHHT------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC--CChhHHHHHHHHHHHHHHC------------------------------------
Confidence 45677788888888777655433 3556688999999999875
Q ss_pred CcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC--CcchHHH
Q 011692 158 STASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG--DSMEKVD 235 (479)
Q Consensus 158 a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~--~~~~~A~ 235 (479)
++++.|.++|+.|+.|+.+... .++..+.
T Consensus 65 -------------------------------------------------G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~ 95 (472)
T 4g1t_A 65 -------------------------------------------------GQNEAALECLRKAEELIQQEHADQAEIRSLV 95 (472)
T ss_dssp -------------------------------------------------TCHHHHHHHHHHHHHHHHHHSGGGCTTTTHH
T ss_pred -------------------------------------------------CCHHHHHHHHHHHHHHHHhcCccccchHHHH
Confidence 4678899999999999877644 3567899
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC--CChhHHHHHHHHHHHHHH
Q 011692 236 ILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG--SKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 236 v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~--g~~eeAi~~~ekAL~I~k 307 (479)
+|.+||.+|..+|+|++|+.+|++++.|.+.+.++.++..+.+|+++|.++... ++|++|+.+|++||.+..
T Consensus 96 ~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p 169 (472)
T 4g1t_A 96 TWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP 169 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999988888999999999988754 479999999999998743
No 94
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.17 E-value=8.5e-10 Score=104.98 Aligned_cols=87 Identities=15% Similarity=0.243 Sum_probs=68.7
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 011692 206 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 285 (479)
Q Consensus 206 ~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 285 (479)
.++++.|..+|+.++.+. +....++..||.++...|+|++|+..|++++.+.. ....+++++|.+
T Consensus 151 ~~~~~~A~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--------~~~~~~~~l~~~ 215 (327)
T 3cv0_A 151 PNEYRECRTLLHAALEMN-------PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRP--------DDAQLWNKLGAT 215 (327)
T ss_dssp HHHHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------CcHHHHHHHHHH
Confidence 456777777776665442 33568899999999999999999999999988732 225789999999
Q ss_pred HHcCCChhHHHHHHHHHHHHHH
Q 011692 286 LEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 286 y~~~g~~eeAi~~~ekAL~I~k 307 (479)
|...|++++|+.+|++++.+..
T Consensus 216 ~~~~~~~~~A~~~~~~a~~~~~ 237 (327)
T 3cv0_A 216 LANGNRPQEALDAYNRALDINP 237 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHcCCHHHHHHHHHHHHHcCC
Confidence 9999999999999999987643
No 95
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.17 E-value=2.9e-10 Score=103.52 Aligned_cols=137 Identities=16% Similarity=0.143 Sum_probs=91.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCC---------hhHHHHHHHHHHHHHhhhhccCCcC
Q 011692 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA---------LECVNAYYQYGRALLYKAQEEADPL 129 (479)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~---------pe~A~~y~~YG~ALl~~ar~esdvL 129 (479)
.......+..++.+|..++..|+|++|+.+|.+|+++.-.. .+.. .-...+|+++|.+++.+
T Consensus 31 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-------- 101 (198)
T 2fbn_A 31 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT-EEWDDQILLDKKKNIEISCNLNLATCYNKN-------- 101 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC-TTCCCHHHHHHHHHHHHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc-cccchhhHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 44466779999999999999999999999999999873110 0000 00136777777777654
Q ss_pred CCCCCCcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChH
Q 011692 130 VSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDL 209 (479)
Q Consensus 130 G~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dl 209 (479)
+++
T Consensus 102 -----------------------------------------------------------------------------~~~ 104 (198)
T 2fbn_A 102 -----------------------------------------------------------------------------KDY 104 (198)
T ss_dssp -----------------------------------------------------------------------------TCH
T ss_pred -----------------------------------------------------------------------------cCH
Confidence 345
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC
Q 011692 210 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG 289 (479)
Q Consensus 210 e~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~ 289 (479)
+.|+..++.++.+. +....+|+.+|.++..+|+|++|+.+|++++.+.. + ...++.+|+.++...
T Consensus 105 ~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----~---~~~~~~~l~~~~~~~ 169 (198)
T 2fbn_A 105 PKAIDHASKVLKID-------KNNVKALYKLGVANMYFGFLEEAKENLYKAASLNP-----N---NLDIRNSYELCVNKL 169 (198)
T ss_dssp HHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----T---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-------cccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-----C---cHHHHHHHHHHHHHH
Confidence 56666666666541 23456777777777777777777777777777632 2 246677777777766
Q ss_pred CChhHHH
Q 011692 290 SKPQEAI 296 (479)
Q Consensus 290 g~~eeAi 296 (479)
+++.++.
T Consensus 170 ~~~~~~~ 176 (198)
T 2fbn_A 170 KEARKKD 176 (198)
T ss_dssp HHHHC--
T ss_pred HHHHHHH
Confidence 6666555
No 96
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.16 E-value=2.9e-11 Score=132.74 Aligned_cols=133 Identities=14% Similarity=0.014 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCc
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~d 146 (479)
..++.+|..++.+|+|++|+.+|.+++++ +|..+.+|+++|.+|+..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~------------------------- 480 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAER--------VGWRWRLVWYRAVAELLT------------------------- 480 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------HCCCHHHHHHHHHHHHHH-------------------------
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhcc--------CcchHHHHHHHHHHHHHc-------------------------
Confidence 46888999999999999999999999998 688999999999999876
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011692 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 226 (479)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~ 226 (479)
++++.|.+.|+.|+.+
T Consensus 481 ------------------------------------------------------------g~~~~A~~~~~~al~l---- 496 (681)
T 2pzi_A 481 ------------------------------------------------------------GDYDSATKHFTEVLDT---- 496 (681)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHH----
T ss_pred ------------------------------------------------------------CCHHHHHHHHHHHHHh----
Confidence 3577788888877765
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 227 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 227 ~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
.+..+.+|++||.++..+|+|++ +.+|+++|++... .+.+|++||.+|..+|++++|+.+|++|+++-
T Consensus 497 ---~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~--------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 564 (681)
T 2pzi_A 497 ---FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDG--------VISAAFGLARARSAEGDRVGAVRTLDEVPPTS 564 (681)
T ss_dssp ---STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTS
T ss_pred ---CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc--------hHHHHHHHHHHHHHcCCHHHHHHHHHhhcccC
Confidence 24457899999999999999999 9999999998432 35799999999999999999999999998764
Q ss_pred HH
Q 011692 307 KS 308 (479)
Q Consensus 307 k~ 308 (479)
..
T Consensus 565 P~ 566 (681)
T 2pzi_A 565 RH 566 (681)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 97
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.16 E-value=1.1e-09 Score=102.33 Aligned_cols=92 Identities=10% Similarity=-0.077 Sum_probs=69.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCC----------cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGD----------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIA 276 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~----------~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iA 276 (479)
++++.|...|+.++..|-..... ...++..+..+|.++...|+|++|+..|++++++. |+++...
T Consensus 110 ~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~ 184 (225)
T 2yhc_A 110 QQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATR 184 (225)
T ss_dssp HHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccH
Confidence 56777766666655443211100 01234556789999999999999999999999875 4567788
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 277 ELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 277 ea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
+++++||.+|..+|++++|+.+|++++
T Consensus 185 ~a~~~l~~~~~~~g~~~~A~~~~~~l~ 211 (225)
T 2yhc_A 185 DALPLMENAYRQMQMNAQAEKVAKIIA 211 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 999999999999999999999997655
No 98
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.16 E-value=8e-10 Score=115.41 Aligned_cols=172 Identities=12% Similarity=0.078 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...+..+|..+...|+|++|+.+|.+++++ .|....+|+.+|.+|...++.+... |.....
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--------- 469 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARL--------FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYA--------- 469 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 567889999999999999999999999976 5677889999999999886543220 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+... ..- -......-..++++.|+++|+.++.++
T Consensus 470 ---------~~~~~~------~~~-----------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~~ 505 (597)
T 2xpi_A 470 ---------LFQYDP------LLL-----------------------------NELGVVAFNKSDMQTAINHFQNALLLV 505 (597)
T ss_dssp ---------HCCCCH------HHH-----------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ---------hCCCCh------HHH-----------------------------HHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 000000 000 000001122368899999999999887
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
.+........+.+|..||.++...|+|++|+..|++++.+. +++ +.+|+.||.+|...|++++|+.+|++++
T Consensus 506 ~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-----p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~l 577 (597)
T 2xpi_A 506 KKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS-----TND---ANVHTAIALVYLHKKIPGLAITHLHESL 577 (597)
T ss_dssp HHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----SCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 76433333358999999999999999999999999999884 233 5899999999999999999999999999
Q ss_pred HHH
Q 011692 304 SVC 306 (479)
Q Consensus 304 ~I~ 306 (479)
++.
T Consensus 578 ~~~ 580 (597)
T 2xpi_A 578 AIS 580 (597)
T ss_dssp HHC
T ss_pred hcC
Confidence 864
No 99
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.16 E-value=2.9e-10 Score=98.60 Aligned_cols=86 Identities=13% Similarity=0.053 Sum_probs=72.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|+.++.+ .+....+|..||.++..+|+|++|+..|++++.+.. ++ ..+|++||.+|
T Consensus 32 g~~~~A~~~~~~al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~---~~~~~~lg~~~ 96 (142)
T 2xcb_A 32 GKWDDAQKIFQALCML-------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI-----NE---PRFPFHAAECH 96 (142)
T ss_dssp TCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---THHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----CC---cHHHHHHHHHH
Confidence 4577777777776643 345678999999999999999999999999999843 33 37899999999
Q ss_pred HcCCChhHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k 307 (479)
..+|++++|+.+|++++.+..
T Consensus 97 ~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 97 LQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999865
No 100
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.15 E-value=3.1e-10 Score=100.19 Aligned_cols=119 Identities=10% Similarity=0.042 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
....++.+|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+++..
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~----------------------- 78 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDPKAHRFLGLLYELE----------------------- 78 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc-----------------------
Confidence 4556789999999999999999999999999 899999999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|...|+.|+.+
T Consensus 79 --------------------------------------------------------------~~~~~A~~~~~~al~~-- 94 (150)
T 4ga2_A 79 --------------------------------------------------------------ENTDKAVECYRRSVEL-- 94 (150)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHH--
T ss_pred --------------------------------------------------------------CchHHHHHHHHHHHHh--
Confidence 3567788888777765
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHH-HHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDY-QKALTILERMVEPDSRHIAELNFRICLCLEIGSK 291 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy-~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~ 291 (479)
.+...++|++||.++...++|++|+..| ++|+++.+ ++ +.+|..++.++...|+
T Consensus 95 -----~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P-----~~---~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 95 -----NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP-----GS---PAVYKLKEQLLDCEGE 149 (150)
T ss_dssp -----CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST-----TC---HHHHHHHHHHHHTCCC
T ss_pred -----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc-----CC---HHHHHHHHHHHHHhCc
Confidence 3456889999999999999999888765 89998853 44 3678888888887774
No 101
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.15 E-value=8e-10 Score=104.74 Aligned_cols=162 Identities=13% Similarity=0.150 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+|++ +....+++++|.+++..- .+.++.
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~----------~~~~~a~~~lg~~~~~g~----~~~~~~------------- 58 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD----------LKENSGCFNLGVLYYQGQ----GVEKNL------------- 58 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHTS----SSCCCH-------------
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHcCC----CcCCCH-------------
Confidence 56788999999999999999999999998 334578999999998720 011110
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCcccc----ccccCcChHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVA----EADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~----~~~ed~~dle~Awe~Le~Ar~ 221 (479)
++...-. .++...+...... ..+ .+....++++.|+.+|+.|..
T Consensus 59 ~~A~~~~--------------~~a~~~~~~~a~~------------------~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 106 (273)
T 1ouv_A 59 KKAASFY--------------AKACDLNYSNGCH------------------LLGNLYYSGQGVSQNTNKALQYYSKACD 106 (273)
T ss_dssp HHHHHHH--------------HHHHHTTCHHHHH------------------HHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHH--------------HHHHHCCCHHHHH------------------HHHHHHhCCCCcccCHHHHHHHHHHHHH
Confidence 0000000 0000000000000 000 000113567777777766654
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc----CCChh
Q 011692 222 IAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GSKPQ 293 (479)
Q Consensus 222 Iyek~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~----~g~~e 293 (479)
. ....++..||.++.. .++|++|+..|++++++. -+.++++||.+|.. .++++
T Consensus 107 ~---------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~----------~~~a~~~lg~~~~~~~~~~~~~~ 167 (273)
T 1ouv_A 107 L---------KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN----------DGDGCTILGSLYDAGRGTPKDLK 167 (273)
T ss_dssp T---------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHTSSSCCCHH
T ss_pred c---------CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC----------cHHHHHHHHHHHHcCCCCCCCHH
Confidence 2 246678888888888 888888888888887642 14678888888887 78888
Q ss_pred HHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISV 305 (479)
Q Consensus 294 eAi~~~ekAL~I 305 (479)
+|+.+|+++++.
T Consensus 168 ~A~~~~~~a~~~ 179 (273)
T 1ouv_A 168 KALASYDKACDL 179 (273)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHC
Confidence 888888888765
No 102
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.14 E-value=7.7e-10 Score=90.89 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..++.+|..++..|+|++|+.+|.+++.+ .|....+|+.+|.+++..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~----------------------- 51 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL--------DPTNMTYITNQAAVYFEK----------------------- 51 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHh-----------------------
Confidence 4678999999999999999999999999997 577889999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|..+|+.+..+..
T Consensus 52 --------------------------------------------------------------~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 52 --------------------------------------------------------------GDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHhhcc
Confidence 457788999999998887
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI 288 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~ 288 (479)
...........+|..||.++...|+|++|+..|++++.+. + + ...+..|+.++..
T Consensus 70 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~-~---~~~~~~l~~~~~~ 124 (131)
T 1elr_A 70 ENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH-----R-T---PDVLKKCQQAEKI 124 (131)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----C-C---HHHHHHHHHHHHH
Confidence 6544445568999999999999999999999999999862 2 2 3555666666543
No 103
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.14 E-value=1.3e-09 Score=96.20 Aligned_cols=85 Identities=18% Similarity=0.022 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++|+.|.++|+.++.+. +..+.+|.+||.+++.+|+|++|+.+|+++|.+... .+.+|++||.+|
T Consensus 25 g~~~~A~~~~~~al~~~-------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--------~~~~~~~lg~~~ 89 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIA-------PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK--------YSKAWSRLGLAR 89 (164)
T ss_dssp TCHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHH
Confidence 46777888888877653 345789999999999999999999999999998432 368999999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
..+|+|++|+.+|+++|.+.
T Consensus 90 ~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 90 FDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhC
Confidence 99999999999999999874
No 104
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.14 E-value=5.8e-10 Score=92.37 Aligned_cols=119 Identities=17% Similarity=0.169 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
....++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~----------------------- 63 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKL----------------------- 63 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTT-----------------------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHh-----------------------
Confidence 3678899999999999999999999999986 677889999999998654
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|+.+|+.++.+.
T Consensus 64 --------------------------------------------------------------~~~~~A~~~~~~a~~~~- 80 (133)
T 2lni_A 64 --------------------------------------------------------------LEFQLALKDCEECIQLE- 80 (133)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhC-
Confidence 45777888888887652
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 291 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~ 291 (479)
+....+|..||.++...|+|++|+..|++++.+... -..+++.|+.+|..+++
T Consensus 81 ------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~--------~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 81 ------PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS--------CKEAADGYQRCMMAQYN 133 (133)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG--------GTHHHHHHHHHHHHHTC
T ss_pred ------CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC--------chHHHHHHHHHHHHhcC
Confidence 345789999999999999999999999999988443 24788999999876653
No 105
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.13 E-value=5.9e-10 Score=98.18 Aligned_cols=91 Identities=12% Similarity=0.017 Sum_probs=77.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC-----C------cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWG-----D------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI 275 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~-----~------~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~i 275 (479)
++|+.|...|..|+.++..... . .+..+.+|.+||.+++.+|+|++|+.+|+++|.+. |..
T Consensus 25 ~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~--------p~~ 96 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKRE--------ETN 96 (162)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------TTC
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcC--------Ccc
Confidence 5688888899988888655321 0 34568899999999999999999999999999983 333
Q ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 276 AELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 276 Aea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+.+||++|.+|..+|+|++|+.+|+++|.+
T Consensus 97 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 97 EKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 689999999999999999999999999976
No 106
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.13 E-value=1e-09 Score=105.22 Aligned_cols=88 Identities=10% Similarity=-0.095 Sum_probs=72.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.++.+. +........+|..||.++...|+|++|+..|++++.+. |....+|+++|.+|
T Consensus 248 ~~~~~A~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 248 GRYTDATSKYESVMKTE---PSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME--------PDNVNALKDRAEAY 316 (359)
T ss_dssp TCHHHHHHHHHHHHHHC---CSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------cccHHHHHHHHHHH
Confidence 57888888888777654 22233356789999999999999999999999999972 22357999999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
...|++++|+.+|++++.+
T Consensus 317 ~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHhc
Confidence 9999999999999999865
No 107
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.13 E-value=4.2e-10 Score=104.89 Aligned_cols=127 Identities=11% Similarity=-0.003 Sum_probs=104.3
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCC
Q 011692 76 ALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNG 155 (479)
Q Consensus 76 ~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~ 155 (479)
....++|++|+.+|.+++++ .....|..+.+|+.+|.+++..
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~---------------------------------- 56 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILAS----RALTDDERAQLLYERGVLYDSL---------------------------------- 56 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHT----------------------------------
T ss_pred cCccchHHHHHHHHHHHHhc----ccccCchhHHHHHHHHHHHHHc----------------------------------
Confidence 34568999999999999986 2234578999999999999875
Q ss_pred CCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCcchHHH
Q 011692 156 ESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVD 235 (479)
Q Consensus 156 e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~ 235 (479)
++++.|...|+.++.+ .+....
T Consensus 57 ---------------------------------------------------~~~~~A~~~~~~al~~-------~~~~~~ 78 (275)
T 1xnf_A 57 ---------------------------------------------------GLRALARNDFSQALAI-------RPDMPE 78 (275)
T ss_dssp ---------------------------------------------------TCHHHHHHHHHHHHHH-------CCCCHH
T ss_pred ---------------------------------------------------ccHHHHHHHHHHHHHc-------CCCcHH
Confidence 3566787777777765 234577
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 236 ILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 236 v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
+|..||.++...|+|++|+.+|++++.+... .+.+|++||.+|...|++++|+.+|++++.+.
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~--------~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPT--------YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCcc--------ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999987322 24889999999999999999999999998764
No 108
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.12 E-value=4.8e-11 Score=106.10 Aligned_cols=128 Identities=13% Similarity=0.112 Sum_probs=103.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCcccc
Q 011692 70 MEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSV 149 (479)
Q Consensus 70 ~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~ 149 (479)
+..+..++..|+|++|+.+|.+++.+ +|..+.+|+.+|.+++..
T Consensus 14 ~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~---------------------------- 57 (177)
T 2e2e_A 14 RDPLHQFASQQNPEAQLQALQDKIRA--------NPQNSEQWALLGEYYLWQ---------------------------- 57 (177)
T ss_dssp STTTCCCC-----CCCCHHHHHHHHH--------CCSCHHHHHHHHHHHHHT----------------------------
T ss_pred hhhhhhhhhccCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc----------------------------
Confidence 33444567789999999999999998 788999999999999875
Q ss_pred ccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCC
Q 011692 150 KNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGD 229 (479)
Q Consensus 150 ~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~ 229 (479)
++++.|...|+.++.+.
T Consensus 58 ---------------------------------------------------------~~~~~A~~~~~~al~~~------ 74 (177)
T 2e2e_A 58 ---------------------------------------------------------NDYSNSLLAYRQALQLR------ 74 (177)
T ss_dssp ---------------------------------------------------------TCHHHHHHHHHHHHHHH------
T ss_pred ---------------------------------------------------------CCHHHHHHHHHHHHHcC------
Confidence 45777888888887664
Q ss_pred cchHHHHHHHHHHH-HHhcCCH--HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 230 SMEKVDILSALAEV-ALEREDI--ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 230 ~~~~A~v~~~LGev-~le~g~y--eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+....++..||.+ +...|+| ++|+..|++++.+.. ++ ..++++||.+|...|++++|+.+|++++.+
T Consensus 75 -p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 75 -GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDS-----NE---ITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp -CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC-----Cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 2346789999999 8899999 999999999998732 22 578999999999999999999999998864
No 109
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.12 E-value=6.8e-10 Score=99.76 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..++.+|..++.+|+|++|+.+|.+++.+ +|..+.+|+++|.+|+.+
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~---------------------- 83 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIK---------------------- 83 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHH----------------------
Confidence 35778999999999999999999999999999 899999999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++|+.|.+.|+.|+.+.
T Consensus 84 ---------------------------------------------------------------g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 84 ---------------------------------------------------------------EQFQQAADLYAVAFALG 100 (151)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------------------------------ccHHHHHHHHHHHHhhC
Confidence 45777888888887663
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
|....+|++||.++..+|+|++|+..|+++|.+.
T Consensus 101 -------P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 101 -------KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp -------SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -------CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3456799999999999999999999999999985
No 110
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=9.5e-10 Score=92.40 Aligned_cols=85 Identities=16% Similarity=-0.008 Sum_probs=73.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.++.+. +..+.+|.++|.++..+|+|++|+.+|+++|.+.. ....+|++||.+|
T Consensus 18 ~~~~~A~~~~~~al~~~-------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~lg~~~ 82 (126)
T 3upv_A 18 SDWPNAVKAYTEMIKRA-------PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP--------NFVRAYIRKATAQ 82 (126)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--------CcHHHHHHHHHHH
Confidence 46778888888877652 34578999999999999999999999999999843 2368999999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
..+|++++|+.+|++++.+.
T Consensus 83 ~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 83 IAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHhC
Confidence 99999999999999999875
No 111
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.11 E-value=4e-10 Score=117.80 Aligned_cols=137 Identities=18% Similarity=0.184 Sum_probs=109.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-------CCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCC
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-------GELALECVNAYYQYGRALLYKAQEEADPLVSVPK 134 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-------Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~ 134 (479)
....+..+..+|..++.+|+|.+|+.+|.+|+++.-... .+..+..+.+|+++|.+|+.+
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------------- 330 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKL------------- 330 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 345688999999999999999999999999999842210 001233479999999999876
Q ss_pred CcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHH
Q 011692 135 KEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWK 214 (479)
Q Consensus 135 ~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe 214 (479)
++|+.|..
T Consensus 331 ------------------------------------------------------------------------g~~~~A~~ 338 (457)
T 1kt0_A 331 ------------------------------------------------------------------------REYTKAVE 338 (457)
T ss_dssp ------------------------------------------------------------------------TCHHHHHH
T ss_pred ------------------------------------------------------------------------cCHHHHHH
Confidence 45778888
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH
Q 011692 215 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 294 (479)
Q Consensus 215 ~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee 294 (479)
.|+.|+.+. +..+.+|+++|.+|+.+++|++|+.+|++||++... ...++++|+.+|..++++++
T Consensus 339 ~~~~al~~~-------p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~--------~~~a~~~l~~~~~~~~~~~~ 403 (457)
T 1kt0_A 339 CCDKALGLD-------SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ--------NKAARLQISMCQKKAKEHNE 403 (457)
T ss_dssp HHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-------CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHHHHHH
Confidence 888887753 345889999999999999999999999999988433 34789999999999998887
Q ss_pred HHHH
Q 011692 295 AIPY 298 (479)
Q Consensus 295 Ai~~ 298 (479)
|...
T Consensus 404 a~~~ 407 (457)
T 1kt0_A 404 RDRR 407 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 112
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.11 E-value=2.1e-09 Score=100.33 Aligned_cols=147 Identities=9% Similarity=0.048 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+++++ .+.++....+++++|.+++..
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~------------------------ 54 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKN------------------------ 54 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhc------------------------
Confidence 567899999999999999999999999986 234566778999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|...|+.++.++-.
T Consensus 55 -------------------------------------------------------------~~~~~A~~~~~~~l~~~P~ 73 (225)
T 2yhc_A 55 -------------------------------------------------------------ADLPLAQAAIDRFIRLNPT 73 (225)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHCTT
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHHCcC
Confidence 3466676666666554321
Q ss_pred hcCCcchHHHHHHHHHHHHHh------------------cCCHHHHHHHHHHHHHHHHHhcCC---------CChhHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALE------------------REDIETSLSDYQKALTILERMVEP---------DSRHIAEL 278 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le------------------~g~yeeAl~dy~kAL~I~~~llg~---------d~r~iAea 278 (479)
......+|..+|.++.. .|++++|+..|++++++....... -...++..
T Consensus 74 ----~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~ 149 (225)
T 2yhc_A 74 ----HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKY 149 (225)
T ss_dssp ----CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHH
Confidence 23345566666666654 689999999999988764321100 00123445
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 279 NFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 279 ~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
++.+|.+|...|+|++|+..|+++|+.+
T Consensus 150 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~ 177 (225)
T 2yhc_A 150 EYSVAEYYTERGAWVAVVNRVEGMLRDY 177 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHC
Confidence 5889999999999999999999998763
No 113
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.9e-09 Score=108.18 Aligned_cols=154 Identities=10% Similarity=0.047 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
.....|..+|..++.+|+|++|.++|.+++.++... +. +...+.++..+|..+.
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~------------------------ 106 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQF-AK-SKTVKVLKTLIEKFEQ------------------------ 106 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS-CH-HHHHHHHHHHHHHHCS------------------------
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-cc-hHHHHHHHHHHHHHHh------------------------
Confidence 345678999999999999999999999999986543 11 2222334444443321
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..++++.|.+++..+..++
T Consensus 107 -------------------------------------------------------------~~~~~~~a~~~~~~~~~~~ 125 (434)
T 4b4t_Q 107 -------------------------------------------------------------VPDSLDDQIFVCEKSIEFA 125 (434)
T ss_dssp -------------------------------------------------------------CCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------CCCCHHHHHHHHHHHHHHH
Confidence 1156788999999999998
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
.+.. .....+.++.+||.++.+.|+|.+|+..|++++.+..... +++..+++|.++|.+|...++|++|..+|++++
T Consensus 126 ~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 126 KREK-RVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD--DKPSLVDVHLLESKVYHKLRNLAKSKASLTAAR 202 (434)
T ss_dssp HHSS-CCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS--CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhC-ccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc--cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 7764 3456899999999999999999999999999998877653 678899999999999999999999999999999
Q ss_pred HHHH
Q 011692 304 SVCK 307 (479)
Q Consensus 304 ~I~k 307 (479)
.+..
T Consensus 203 ~~~~ 206 (434)
T 4b4t_Q 203 TAAN 206 (434)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8864
No 114
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.2e-09 Score=111.01 Aligned_cols=173 Identities=17% Similarity=0.160 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+... +-....
T Consensus 304 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~--------- 366 (514)
T 2gw1_A 304 SSVYYHRGQMNFILQNYDQAGKDFDKAKEL--------DPENIFPYIQLACLAYRENKFDDCETLFSEAKR--------- 366 (514)
T ss_dssp THHHHHHHHHHHHTTCTTHHHHHHHHHHHT--------CSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 346889999999999999999999999986 5677789999999998876543210 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+... .. .. ..+...-..++++.|..+|+.++.+.
T Consensus 367 ---------~~~~~~------~~--------~~---------------------~la~~~~~~~~~~~A~~~~~~a~~~~ 402 (514)
T 2gw1_A 367 ---------KFPEAP------EV--------PN---------------------FFAEILTDKNDFDKALKQYDLAIELE 402 (514)
T ss_dssp ---------HSTTCS------HH--------HH---------------------HHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ---------HcccCH------HH--------HH---------------------HHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 000000 00 00 00000112367888888888888776
Q ss_pred HHhcCCcchHHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALE---REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 300 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le---~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~e 300 (479)
..... ....+.+|..||.++.. .|+|++|+..|++++.+.. ....+|+.||.+|...|++++|+.+|+
T Consensus 403 ~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~la~~~~~~g~~~~A~~~~~ 473 (514)
T 2gw1_A 403 NKLDG-IYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDP--------RSEQAKIGLAQMKLQQEDIDEAITLFE 473 (514)
T ss_dssp HTSSS-CSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hccch-HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 55432 12336699999999999 9999999999999998732 235889999999999999999999999
Q ss_pred HHHHHHHH
Q 011692 301 KAISVCKS 308 (479)
Q Consensus 301 kAL~I~k~ 308 (479)
+++.+...
T Consensus 474 ~a~~~~~~ 481 (514)
T 2gw1_A 474 ESADLART 481 (514)
T ss_dssp HHHHHCSS
T ss_pred HHHHhccc
Confidence 99987543
No 115
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.10 E-value=2.1e-09 Score=108.00 Aligned_cols=89 Identities=10% Similarity=-0.099 Sum_probs=73.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|+.+|+.++.+. +........+|..||.++...|+|++|+..|++++.+. |..+.+|++||.+|
T Consensus 271 g~~~~A~~~~~~~l~~~---p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~--------p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 271 GRYTDATSKYESVMKTE---PSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME--------PDNVNALKDRAEAY 339 (450)
T ss_dssp TCHHHHHHHHHHHHHHC---CSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---CcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------cccHHHHHHHHHHH
Confidence 56788888888887653 22223347799999999999999999999999999883 23358999999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
...|++++|+.+|++++.+.
T Consensus 340 ~~~~~~~~A~~~~~~al~~~ 359 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHN 359 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTS
T ss_pred HHhcCHHHHHHHHHHHHHhC
Confidence 99999999999999998763
No 116
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.08 E-value=5.8e-09 Score=87.79 Aligned_cols=102 Identities=23% Similarity=0.270 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+++.+ .|..+.+|+++|.+++.+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~------------------------ 56 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKM------------------------ 56 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh--------CcCcHHHHHHHHHHHHHh------------------------
Confidence 678899999999999999999999999998 688899999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|...|+.++.+.
T Consensus 57 -------------------------------------------------------------~~~~~A~~~~~~al~~~-- 73 (137)
T 3q49_B 57 -------------------------------------------------------------QQPEQALADCRRALELD-- 73 (137)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHhC--
Confidence 35677888888877653
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 267 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~l 267 (479)
+....+|..||.++..+|+|++|+..|++++.+....
T Consensus 74 -----p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 74 -----GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred -----chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 3457899999999999999999999999999998873
No 117
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.07 E-value=8e-09 Score=84.73 Aligned_cols=92 Identities=24% Similarity=0.260 Sum_probs=79.0
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|+.++.+. +..+.+|..||.++...|+|++|+.+|++++.+.... +.+++.++.+|++||.+|
T Consensus 18 ~~~~~A~~~~~~a~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~ 89 (131)
T 1elr_A 18 KDFDTALKHYDKAKELD-------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-REDYRQIAKAYARIGNSY 89 (131)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcC-------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-chhHHHHHHHHHHHHHHH
Confidence 46777888888777653 2347899999999999999999999999999998754 456667789999999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
...+++++|+.+|++++.+.
T Consensus 90 ~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 90 FKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHC
T ss_pred HHhccHHHHHHHHHHHHHhC
Confidence 99999999999999999874
No 118
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.07 E-value=6.4e-11 Score=118.69 Aligned_cols=128 Identities=14% Similarity=0.026 Sum_probs=106.5
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCCCC
Q 011692 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (479)
Q Consensus 78 ~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (479)
.+++|++|+++|.+++++ .|..+.+|+.+|.+|+..
T Consensus 125 ~L~~~~~A~~~~~~a~~~--------~p~~a~~~~~~g~~~~~~------------------------------------ 160 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE--------KLEQSTIVKERGTVYFKE------------------------------------ 160 (336)
T ss_dssp EEEEEECCCCGGGCCHHH--------HHHHHHHHHHHHHHHHHH------------------------------------
T ss_pred EEeecccccchhcCCHHH--------HHHHHHHHHHHHHHHHHC------------------------------------
Confidence 567888999999999887 588999999999999976
Q ss_pred CcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC--------C
Q 011692 158 STASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG--------D 229 (479)
Q Consensus 158 a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~--------~ 229 (479)
++|+.|...|+.|+.+...... .
T Consensus 161 -------------------------------------------------g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~ 191 (336)
T 1p5q_A 161 -------------------------------------------------GKYKQALLQYKKIVSWLEYESSFSNEEAQKA 191 (336)
T ss_dssp -------------------------------------------------TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHH
T ss_pred -------------------------------------------------CCHHHHHHHHHHHHHHhhccccCChHHHHHH
Confidence 3567778888888776543311 0
Q ss_pred cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 230 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 230 ~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
.+..+.+|.+||.+++.+|+|++|+.+|+++|.+.. ..+.+|++||.+|..+++|++|+.+|++||.+.
T Consensus 192 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 192 QALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS--------NNEKGLSRRGEAHLAVNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 123478999999999999999999999999999843 236899999999999999999999999999863
No 119
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.07 E-value=2e-09 Score=110.36 Aligned_cols=173 Identities=18% Similarity=0.143 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..++.+... |-....
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~--------- 372 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSL--------NPENVYPYIQLACLLYKQGKFTESEAFFNETKL--------- 372 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 567899999999999999999999999997 6777889999999999886553221 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+... .. . -..+...-..++++.|...|+.++.+.
T Consensus 373 ---------~~~~~~------~~--------~---------------------~~l~~~~~~~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 373 ---------KFPTLP------EV--------P---------------------TFFAEILTDRGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp ---------HCTTCT------HH--------H---------------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ---------hCCCCh------HH--------H---------------------HHHHHHHHHhCCHHHHHHHHHHHHHcC
Confidence 000000 00 0 000001123478899999999999888
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChh
Q 011692 224 EKHWGDSMEKVDILSALAEVALER----------EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 293 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~----------g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~e 293 (479)
....... .....+..+|.++... |+|++|+..|++++.+.. + ...+|++||.+|...|+++
T Consensus 409 ~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p-----~---~~~~~~~l~~~~~~~g~~~ 479 (537)
T 3fp2_A 409 EVQEKIH-VGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDP-----R---SEQAKIGLAQLKLQMEKID 479 (537)
T ss_dssp HHCSSCS-STTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHTTCHH
T ss_pred CcchhhH-HHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCC-----C---CHHHHHHHHHHHHHhccHH
Confidence 6654322 2334567788888888 999999999999998832 2 2488999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISVCKS 308 (479)
Q Consensus 294 eAi~~~ekAL~I~k~ 308 (479)
+|+.+|++++.+...
T Consensus 480 ~A~~~~~~al~~~~~ 494 (537)
T 3fp2_A 480 EAIELFEDSAILART 494 (537)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999988554
No 120
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.07 E-value=4.1e-09 Score=105.77 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..++.+|..++..|+|++|+.+|.+++++ +|..+.+|+.+|.+++..
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~---------------------- 73 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDG--------DPDNYIAYYRRATVFLAM---------------------- 73 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHC----------------------
Confidence 34778999999999999999999999999987 788899999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|..+|+.++.+.
T Consensus 74 ---------------------------------------------------------------g~~~~A~~~~~~al~~~ 90 (450)
T 2y4t_A 74 ---------------------------------------------------------------GKSKAALPDLTKVIQLK 90 (450)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------------------------------CCHHHHHHHHHHHHhcC
Confidence 35667887777776542
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh------------HHHHHHHHHHHHHcCCC
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH------------IAELNFRICLCLEIGSK 291 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~------------iAea~~~LG~ay~~~g~ 291 (479)
+....+|..||.++..+|+|++|+..|++++.+. +++.. ....++.+|.+|...|+
T Consensus 91 -------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 158 (450)
T 2y4t_A 91 -------MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN-----PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGD 158 (450)
T ss_dssp -------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999999998752 23221 12235667888999999
Q ss_pred hhHHHHHHHHHHHHH
Q 011692 292 PQEAIPYCQKAISVC 306 (479)
Q Consensus 292 ~eeAi~~~ekAL~I~ 306 (479)
+++|+.+|++++.+.
T Consensus 159 ~~~A~~~~~~~~~~~ 173 (450)
T 2y4t_A 159 YTAAIAFLDKILEVC 173 (450)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999988764
No 121
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.06 E-value=3.5e-09 Score=110.53 Aligned_cols=171 Identities=14% Similarity=0.156 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...+..+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+|...++.+... |-....
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--------- 435 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTM--------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAAR--------- 435 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------
Confidence 677888999999999999999999999987 6888899999999999986553321 100000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+... ... -.........++++.|+++|+.++.+.
T Consensus 436 ---------~~~~~~------~~~-----------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~~ 471 (597)
T 2xpi_A 436 ---------LFQGTH------LPY-----------------------------LFLGMQHMQLGNILLANEYLQSSYALF 471 (597)
T ss_dssp ---------TTTTCS------HHH-----------------------------HHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ---------hCccch------HHH-----------------------------HHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 000000 000 000000112356777777777666442
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
+....+|+.||.++...|+|++|+..|++++.+.+.. +.+....+.+|+.||.+|...|++++|+.+|++++
T Consensus 472 -------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 543 (597)
T 2xpi_A 472 -------QYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKT-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGL 543 (597)
T ss_dssp -------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -------CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 2346789999999999999999999999999998764 22333357999999999999999999999999998
Q ss_pred HH
Q 011692 304 SV 305 (479)
Q Consensus 304 ~I 305 (479)
.+
T Consensus 544 ~~ 545 (597)
T 2xpi_A 544 LL 545 (597)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 122
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.06 E-value=2.5e-11 Score=128.01 Aligned_cols=130 Identities=17% Similarity=0.183 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
+.+..+..+|..++.+|+|++|+.+|.+|+++ +|..+.+|+++|.+|+.+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~--------~p~~~~~~~~lg~~~~~~---------------------- 53 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRT---------------------- 53 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHh----------------------
Confidence 45677888999999999999999999999998 899999999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|.+.|+.|+.+
T Consensus 54 ---------------------------------------------------------------g~~~~A~~~~~~al~l- 69 (477)
T 1wao_1 54 ---------------------------------------------------------------ECYGYALGDATRAIEL- 69 (477)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHS-
T ss_pred ---------------------------------------------------------------cCHHHHHHHHHHHHHh-
Confidence 3567788888877765
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH--HHcCCChhHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC--LEIGSKPQEAIPYCQK 301 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a--y~~~g~~eeAi~~~ek 301 (479)
.+..+.+|.+||.++..+|+|++|+.+|+++|++.. ++ ..++++|+.+ |..+++|++|+.+|++
T Consensus 70 ------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p-----~~---~~~~~~l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 70 ------DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP-----HD---KDAKMKYQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp ------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----TC---TTHHHHHHHHHHHHHHHHHCCC------
T ss_pred ------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC---HHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 345688999999999999999999999999999832 22 3578888888 8888999999999983
No 123
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.05 E-value=4e-10 Score=113.11 Aligned_cols=37 Identities=24% Similarity=0.301 Sum_probs=33.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 011692 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEI 95 (479)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei 95 (479)
....+..+..+..+|..++..|+|++|+.+|.+|+.+
T Consensus 172 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~ 208 (338)
T 2if4_A 172 VEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAY 208 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3445678999999999999999999999999999998
No 124
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.9e-09 Score=107.19 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHHHhc--CCCC----hhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 234 VDILSALAEVALE---REDIETSLSDYQKALTILERMV--EPDS----RHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 234 A~v~~~LGev~le---~g~yeeAl~dy~kAL~I~~~ll--g~d~----r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
..++..+|.+++. .|+|++|+..|++++.+.+..+ .+++ +..+.+|+.+|.+|...|++++|+.+|++++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 186 ADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 8889999999997 9999999999999999877666 4444 77899999999999999999999999999987
Q ss_pred HHHH
Q 011692 305 VCKS 308 (479)
Q Consensus 305 I~k~ 308 (479)
+...
T Consensus 266 ~~~~ 269 (514)
T 2gw1_A 266 LFPR 269 (514)
T ss_dssp HCCC
T ss_pred hCcc
Confidence 6543
No 125
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.03 E-value=1.6e-09 Score=110.60 Aligned_cols=139 Identities=15% Similarity=0.122 Sum_probs=112.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--------hCCCChhHHHHHHHHHHHHHhhhhccCCcCC
Q 011692 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH--------YGELALECVNAYYQYGRALLYKAQEEADPLV 130 (479)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~--------~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG 130 (479)
....+..+..|..+|..++.+|+|++|+.+|.+|+++.... .....|..+.+|+++|.+|+.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--------- 286 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM--------- 286 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT---------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 34466779999999999999999999999999999976542 1225788999999999999875
Q ss_pred CCCCCcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHH
Q 011692 131 SVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLD 210 (479)
Q Consensus 131 ~~~~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle 210 (479)
++++
T Consensus 287 ----------------------------------------------------------------------------g~~~ 290 (370)
T 1ihg_A 287 ----------------------------------------------------------------------------SDWQ 290 (370)
T ss_dssp ----------------------------------------------------------------------------TCHH
T ss_pred ----------------------------------------------------------------------------cCHH
Confidence 3466
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCC
Q 011692 211 LAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS 290 (479)
Q Consensus 211 ~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g 290 (479)
.|++.++.|+.+ .+..+.+|++||.++..+++|++|+.+|++||++.. ++ ..++..|+.++..++
T Consensus 291 ~A~~~~~~al~~-------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P-----~~---~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 291 GAVDSCLEALEI-------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAP-----ED---KAIQAELLKVKQKIK 355 (370)
T ss_dssp HHHHHHHHHHTT-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----CC---HHHHHHHHHHHHHHH
Confidence 777777777653 345789999999999999999999999999999843 22 467888888888877
Q ss_pred ChhHHHH
Q 011692 291 KPQEAIP 297 (479)
Q Consensus 291 ~~eeAi~ 297 (479)
+++++..
T Consensus 356 ~~~~a~k 362 (370)
T 1ihg_A 356 AQKDKEK 362 (370)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766644
No 126
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.03 E-value=8e-09 Score=91.14 Aligned_cols=102 Identities=14% Similarity=0.143 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
..+..++.+|..++.+|+|++|+.+|.+++.+ .|..+.+|+++|.+|+..
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~---------------------- 68 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAM---------------------- 68 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT----------------------
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHH----------------------
Confidence 34678899999999999999999999999998 799999999999999875
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
++++.|...|+.|+.+.
T Consensus 69 ---------------------------------------------------------------g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 69 ---------------------------------------------------------------GQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp ---------------------------------------------------------------TCHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------------------------------hhHHHHHHHHHHHHhcC
Confidence 45777888888887653
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 265 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~ 265 (479)
+....+|++||.++..+|+|++|+..|++++++..
T Consensus 86 -------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 86 -------IXEPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp -------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred -------CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 34567899999999999999999999999999975
No 127
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.02 E-value=5.7e-09 Score=98.87 Aligned_cols=162 Identities=14% Similarity=0.147 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCC
Q 011692 66 ADELMEKGTNALK----ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (479)
Q Consensus 66 A~~L~~~G~~~~~----~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~ 141 (479)
+..+..+|..++. .++|++|+.+|.+|+++ | .+.+++++|.+++..- .+.++..
T Consensus 38 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-----~-----~~~a~~~lg~~~~~g~----~~~~~~~-------- 95 (273)
T 1ouv_A 38 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL-----N-----YSNGCHLLGNLYYSGQ----GVSQNTN-------- 95 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHTS----SSCCCHH--------
T ss_pred HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHHhCCC----CcccCHH--------
Confidence 4567889999999 99999999999999986 1 5789999999998720 1111100
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCcccc----ccccCcChHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVA----EADEDESDLDLAWKMLD 217 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~----~~~ed~~dle~Awe~Le 217 (479)
+...- -.++...+...... ..+ .+....++++.|+++|+
T Consensus 96 -----~A~~~--------------~~~a~~~~~~~a~~------------------~lg~~~~~~~~~~~~~~~A~~~~~ 138 (273)
T 1ouv_A 96 -----KALQY--------------YSKACDLKYAEGCA------------------SLGGIYHDGKVVTRDFKKAVEYFT 138 (273)
T ss_dssp -----HHHHH--------------HHHHHHTTCHHHHH------------------HHHHHHHHCSSSCCCHHHHHHHHH
T ss_pred -----HHHHH--------------HHHHHHcCCccHHH------------------HHHHHHHcCCCcccCHHHHHHHHH
Confidence 00000 00000000000000 000 00012467888888888
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc----C
Q 011692 218 VARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----G 289 (479)
Q Consensus 218 ~Ar~Iyek~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~----~ 289 (479)
.|..+ ....++.+||.++.. .++|++|+..|++++++ .+ +.++++||.+|.. .
T Consensus 139 ~a~~~---------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~~lg~~~~~g~~~~ 199 (273)
T 1ouv_A 139 KACDL---------NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL-------KD---SPGCFNAGNMYHHGEGAT 199 (273)
T ss_dssp HHHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTCSSC
T ss_pred HHHhc---------CcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCC
Confidence 87752 246789999999999 99999999999999976 12 5899999999999 9
Q ss_pred CChhHHHHHHHHHHHH
Q 011692 290 SKPQEAIPYCQKAISV 305 (479)
Q Consensus 290 g~~eeAi~~~ekAL~I 305 (479)
+++++|+.+|++++++
T Consensus 200 ~~~~~A~~~~~~a~~~ 215 (273)
T 1ouv_A 200 KNFKEALARYSKACEL 215 (273)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhC
Confidence 9999999999999976
No 128
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.00 E-value=1.4e-08 Score=101.86 Aligned_cols=150 Identities=10% Similarity=0.002 Sum_probs=128.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccc
Q 011692 69 LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDS 148 (479)
Q Consensus 69 L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~ 148 (479)
+...|..+...|+|+.|+.+|.+++.+...... .+..+.+++++|.+++..
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~la~~~~~~--------------------------- 148 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR--VFLKHSLSIKLATLHYQK--------------------------- 148 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC--CSSHHHHHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHHHHc---------------------------
Confidence 344566677789999999999999999876643 456899999999999875
Q ss_pred cccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC
Q 011692 149 VKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG 228 (479)
Q Consensus 149 ~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~ 228 (479)
++|..|..+|..++.++.+..
T Consensus 149 ----------------------------------------------------------g~~~~A~~~l~~~~~~~~~~~- 169 (434)
T 4b4t_Q 149 ----------------------------------------------------------KQYKDSLALINDLLREFKKLD- 169 (434)
T ss_dssp ----------------------------------------------------------TCHHHHHHHHHHHHHHHTTSS-
T ss_pred ----------------------------------------------------------cChHHHHHHHHHHHHHHHhcc-
Confidence 468889999999988876653
Q ss_pred CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Q 011692 229 DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 229 ~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
+++..+.+|..+|.+|...++|++|...|++++.+...+. ..++..+..+.++|..|...++|++|..+|.+++..+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 170 DKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999999999998774 34567899999999999999999999999999998764
No 129
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.00 E-value=1e-08 Score=88.69 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..++.+|..++..|+|++|+.+|.+++.+ +|....+|+.+|.+|+..
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------- 65 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSL----------------------- 65 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHH-----------------------
Confidence 4678899999999999999999999999998 789999999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|...|+.|+.+.
T Consensus 66 --------------------------------------------------------------g~~~~A~~~~~~al~~~- 82 (142)
T 2xcb_A 66 --------------------------------------------------------------GLYEQALQSYSYGALMD- 82 (142)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------hhHHHHHHHHHHHHhcC-
Confidence 45777888888887653
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 266 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ 266 (479)
+....+|+.||.++..+|+|++|+..|++++.+...
T Consensus 83 ------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 83 ------INEPRFPFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp ------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred ------CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 344678999999999999999999999999999763
No 130
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.99 E-value=5.9e-09 Score=87.78 Aligned_cols=86 Identities=21% Similarity=0.108 Sum_probs=73.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|..++.+. +....+|.+||.++..+++|++|+.+|++++.+.. ..+.+|++||.+|
T Consensus 23 ~~~~~A~~~~~~al~~~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p--------~~~~~~~~l~~~~ 87 (137)
T 3q49_B 23 RKYPEAAACYGRAITRN-------PLVAVYYTNRALCYLKMQQPEQALADCRRALELDG--------QSVKAHFFLGQCQ 87 (137)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhC-------cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc--------hhHHHHHHHHHHH
Confidence 46778888888777652 34578999999999999999999999999999843 2357999999999
Q ss_pred HcCCChhHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k 307 (479)
...|++++|+.+|++++.+..
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHCh
Confidence 999999999999999998744
No 131
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.99 E-value=1e-09 Score=120.54 Aligned_cols=129 Identities=16% Similarity=0.058 Sum_probs=107.4
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCCC
Q 011692 77 LKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGE 156 (479)
Q Consensus 77 ~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e 156 (479)
+..|+|++|+++|.++++......+..+|..+.+|+.+|.+|+..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~----------------------------------- 446 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDL----------------------------------- 446 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHH-----------------------------------
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhc-----------------------------------
Confidence 789999999999999995544555667899999999999999886
Q ss_pred CCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCcchHHHH
Q 011692 157 SSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDI 236 (479)
Q Consensus 157 ~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v 236 (479)
++++.|...|+.++.+. +..+.+
T Consensus 447 --------------------------------------------------g~~~~A~~~~~~al~~~-------p~~~~a 469 (681)
T 2pzi_A 447 --------------------------------------------------GDVAKATRKLDDLAERV-------GWRWRL 469 (681)
T ss_dssp --------------------------------------------------TCHHHHHHHHHHHHHHH-------CCCHHH
T ss_pred --------------------------------------------------CCHHHHHHHHHHHhccC-------cchHHH
Confidence 35777888888777652 345889
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 237 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 237 ~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
|+++|.+++.+|+|++|+.+|++||++.... +.+|++||.+|..+|+|++ +.+|++||++-
T Consensus 470 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~--------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~ 530 (681)
T 2pzi_A 470 VWYRAVAELLTGDYDSATKHFTEVLDTFPGE--------LAPKLALAATAELAGNTDE-HKFYQTVWSTN 530 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC--------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhC
Confidence 9999999999999999999999999986433 5899999999999999999 99999999864
No 132
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.98 E-value=7.9e-10 Score=100.60 Aligned_cols=91 Identities=14% Similarity=0.005 Sum_probs=72.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcc---------hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSM---------EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAE 277 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~---------~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAe 277 (479)
++|+.|...|+.|+.++........ -.+.+|.+||.+++.+|+|++|+.+|+++|.+. +..+.
T Consensus 52 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------p~~~~ 123 (198)
T 2fbn_A 52 NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID--------KNNVK 123 (198)
T ss_dssp TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------cccHH
Confidence 4577777777777766543321111 125899999999999999999999999999983 23368
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 278 LNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 278 a~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+|+++|.+|..+++|++|+.+|++++.+
T Consensus 124 ~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 124 ALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999976
No 133
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.98 E-value=1.7e-09 Score=114.59 Aligned_cols=120 Identities=13% Similarity=0.039 Sum_probs=86.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCCCCC
Q 011692 79 ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGESS 158 (479)
Q Consensus 79 ~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e~a 158 (479)
.|+|++|+.+|.+++++ +|..+.+|+.+|.+|+..
T Consensus 2 ~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~------------------------------------- 36 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH--------RPQDFVAWLMLADAELGM------------------------------------- 36 (568)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHH-------------------------------------
T ss_pred CccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc-------------------------------------
Confidence 47999999999999987 788899999999999876
Q ss_pred cccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 011692 159 TASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILS 238 (479)
Q Consensus 159 ~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~ 238 (479)
++++.|.+.|+.|+.+ .+..+.+|.
T Consensus 37 ------------------------------------------------g~~~~A~~~~~~al~~-------~p~~~~~~~ 61 (568)
T 2vsy_A 37 ------------------------------------------------GDTTAGEMAVQRGLAL-------HPGHPEAVA 61 (568)
T ss_dssp ------------------------------------------------TCHHHHHHHHHHHHTT-------STTCHHHHH
T ss_pred ------------------------------------------------CCHHHHHHHHHHHHHh-------CCCCHHHHH
Confidence 3466677777666643 345688999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 239 ALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 239 ~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
+||.++..+|+|++|+.+|++++++.. + .+.+|++||.+|...|++++|+.+|++++++.
T Consensus 62 ~lg~~~~~~g~~~~A~~~~~~al~~~p-----~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 62 RLGRVRWTQQRHAEAAVLLQQASDAAP-----E---HPGIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCC-----C---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999842 2 26899999999999999999999999999874
No 134
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=8.6e-09 Score=82.96 Aligned_cols=115 Identities=19% Similarity=0.157 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~----------------------- 51 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL--------DPHNHVLYSNRSAAYAKK----------------------- 51 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH-----------------------
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHhh-----------------------
Confidence 5778999999999999999999999999997 577788999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|...++.++.+.
T Consensus 52 --------------------------------------------------------------~~~~~A~~~~~~~~~~~- 68 (118)
T 1elw_A 52 --------------------------------------------------------------GDYQKAYEDGCKTVDLK- 68 (118)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHC-
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHhC-
Confidence 35667777777776652
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 287 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 287 (479)
+....+|..+|.++...|+|++|+..|++++.+. +++ ..+++.|+.+..
T Consensus 69 ------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~l~~~~~ 117 (118)
T 1elw_A 69 ------PDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE-----ANN---PQLKEGLQNMEA 117 (118)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----TTC---HHHHHHHHHHHH
T ss_pred ------cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC-----CCC---HHHHHHHHHhhc
Confidence 3457899999999999999999999999998763 233 366777776653
No 135
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.98 E-value=1.2e-09 Score=114.36 Aligned_cols=147 Identities=14% Similarity=0.065 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcC
Q 011692 67 DELMEKGTNALKE---------SDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (479)
Q Consensus 67 ~~L~~~G~~~~~~---------gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~ 137 (479)
..+..+|..++.+ |+|++|+.+|.+|+++ .|..+.+|+++|.+|+...-. .
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~------~------ 230 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM--------DVLDGRSWYILGNAYLSLYFN------T------ 230 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHH------T------
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHh------h------
Confidence 5678899999999 9999999999999998 799999999999999876100 0
Q ss_pred CCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHH
Q 011692 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLD 217 (479)
Q Consensus 138 e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le 217 (479)
+ ...++++.|...|+
T Consensus 231 ----------------------------------------------~-------------------~~~g~~~~A~~~~~ 245 (474)
T 4abn_A 231 ----------------------------------------------G-------------------QNPKISQQALSAYA 245 (474)
T ss_dssp ----------------------------------------------T-------------------CCHHHHHHHHHHHH
T ss_pred ----------------------------------------------c-------------------cccchHHHHHHHHH
Confidence 0 01267889999999
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHH
Q 011692 218 VARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIP 297 (479)
Q Consensus 218 ~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~ 297 (479)
.|+.+.-. ....+.+|.+||.++..+|+|++|+.+|++++.+... ...++++|+.+|..++++++|+.
T Consensus 246 ~al~~~p~----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~--------~~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 246 QAEKVDRK----ASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPA--------WPEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp HHHHHCGG----GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC----cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHHHHHHHHH
Confidence 88876211 1257899999999999999999999999999998533 25899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 011692 298 YCQKAISVCKSRVQRL 313 (479)
Q Consensus 298 ~~ekAL~I~k~rl~~l 313 (479)
.|++. ...++..+
T Consensus 314 ~~~~~---~~~~l~~~ 326 (474)
T 4abn_A 314 SKGKT---KPKKLQSM 326 (474)
T ss_dssp HTTTC---CHHHHHHH
T ss_pred Hhccc---cCccHHHH
Confidence 99875 34444444
No 136
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.97 E-value=2.2e-10 Score=119.82 Aligned_cols=127 Identities=14% Similarity=0.049 Sum_probs=105.8
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCCCC
Q 011692 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (479)
Q Consensus 78 ~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (479)
.+++|++|+++|.+++++ .|..+..|+.+|.+|+..
T Consensus 246 ~l~~~~~A~~~~~~~~~~--------~~~~a~~~~~~G~~~~~~------------------------------------ 281 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE--------KLEQAAIVKEKGTVYFKG------------------------------------ 281 (457)
T ss_dssp EEEEEECCCCGGGSCHHH--------HHHHHHHHHHHHHHHHHT------------------------------------
T ss_pred hhhhcccCcchhhcCHHH--------HHHHHHHHHHHHHHHHhC------------------------------------
Confidence 446778899999888887 588999999999999875
Q ss_pred CcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcC--------C
Q 011692 158 STASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWG--------D 229 (479)
Q Consensus 158 a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~--------~ 229 (479)
++|+.|...|+.|+.+...... .
T Consensus 282 -------------------------------------------------g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~ 312 (457)
T 1kt0_A 282 -------------------------------------------------GKYMQAVIQYGKIVSWLEMEYGLSEKESKAS 312 (457)
T ss_dssp -------------------------------------------------TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHH
T ss_pred -------------------------------------------------CCHHHHHHHHHHHHHHhcccccCChHHHHHH
Confidence 4577788888888877643311 0
Q ss_pred cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 230 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 230 ~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
....+.+|++||.+++.+++|++|+.+|++||.+... .+.+||++|.+|..+++|++|+.+|++||.+
T Consensus 313 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~--------~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 313 ESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA--------NEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc--------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 1234789999999999999999999999999998532 3689999999999999999999999999976
No 137
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.96 E-value=2.2e-08 Score=81.10 Aligned_cols=116 Identities=24% Similarity=0.339 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+++.+ .|....+++.+|.+++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~------------------------ 56 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQ------------------------ 56 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHh------------------------
Confidence 567889999999999999999999999987 567788999999999764
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|..+|+.+..+.
T Consensus 57 -------------------------------------------------------------~~~~~A~~~~~~~~~~~-- 73 (125)
T 1na0_A 57 -------------------------------------------------------------GDYDEAIEYYQKALELD-- 73 (125)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHC--
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHHHHhC--
Confidence 35677877777776542
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG 289 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~ 289 (479)
+....++..||.++...++|++|+..|++++.+.. ++ ..++++||.++...
T Consensus 74 -----~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-----~~---~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 74 -----PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----NN---AEAKQNLGNAKQKQ 124 (125)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHH
T ss_pred -----CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----Cc---HHHHHHHHHHHHhc
Confidence 23467899999999999999999999999998732 22 46888888888654
No 138
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.95 E-value=9.3e-09 Score=95.66 Aligned_cols=133 Identities=14% Similarity=0.070 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..++|++|+.+|.+|++. ..+.+++++|.+|+.. | +
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----------g~~~a~~~lg~~y~~~--------g-~------------- 65 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----------GDGDALALLAQLKIRN--------P-Q------------- 65 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----------TCHHHHHHHHHHTTSS--------T-T-------------
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHcC--------C-C-------------
Confidence 678899999999999999999999999874 2467999999887541 0 0
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
..+++.|..+|+.|..
T Consensus 66 ------------------------------------------------------------~~~~~~A~~~~~~A~~---- 81 (212)
T 3rjv_A 66 ------------------------------------------------------------QADYPQARQLAEKAVE---- 81 (212)
T ss_dssp ------------------------------------------------------------SCCHHHHHHHHHHHHH----
T ss_pred ------------------------------------------------------------CCCHHHHHHHHHHHHH----
Confidence 0256667777766632
Q ss_pred hcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc----CCChhHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GSKPQEAIP 297 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~----~g~~eeAi~ 297 (479)
...+.++++||.+|.. .+++++|+..|++|+++- ++...+.++++||.+|.. .+++++|+.
T Consensus 82 -----~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~------~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~ 150 (212)
T 3rjv_A 82 -----AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDS------ESDAAVDAQMLLGLIYASGVHGPEDDVKASE 150 (212)
T ss_dssp -----TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSST------TSHHHHHHHHHHHHHHHHTSSSSCCHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcC------CCcchHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence 1346677788888777 777788877777776541 111346777888888877 667788888
Q ss_pred HHHHHHHH
Q 011692 298 YCQKAISV 305 (479)
Q Consensus 298 ~~ekAL~I 305 (479)
+|++|+++
T Consensus 151 ~~~~A~~~ 158 (212)
T 3rjv_A 151 YFKGSSSL 158 (212)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 88877764
No 139
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.95 E-value=2.7e-09 Score=103.92 Aligned_cols=102 Identities=23% Similarity=0.273 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..+..+|..++..|+|++|+.+|.+|+.+ +|..+.+|+++|.+|+.+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~------------------------ 51 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKM------------------------ 51 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHh------------------------
Confidence 567899999999999999999999999998 788999999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|...|+.|+.+
T Consensus 52 -------------------------------------------------------------~~~~~A~~~~~~al~~--- 67 (281)
T 2c2l_A 52 -------------------------------------------------------------QQPEQALADCRRALEL--- 67 (281)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHTTS---
T ss_pred -------------------------------------------------------------cCHHHHHHHHHHHHHh---
Confidence 3466676666666543
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 267 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~l 267 (479)
.+....+|++||.++..+|+|++|+.+|++++.+....
T Consensus 68 ----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 68 ----DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 45568899999999999999999999999999998864
No 140
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.93 E-value=6.4e-09 Score=88.67 Aligned_cols=99 Identities=22% Similarity=0.222 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCcc
Q 011692 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (479)
Q Consensus 68 ~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de 147 (479)
.++.+|..++..|+|++|+.+|.+++++ .|.++.+|+.+|.+++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~-------------------------- 64 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAEN-------------------------- 64 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHT--------------------------
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHc--------------------------
Confidence 5788999999999999999999999998 899999999999999875
Q ss_pred ccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011692 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 227 (479)
Q Consensus 148 ~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~ 227 (479)
++++.|...|+.|+.+
T Consensus 65 -----------------------------------------------------------g~~~~A~~~~~~al~l----- 80 (121)
T 1hxi_A 65 -----------------------------------------------------------EKDGLAIIALNHARML----- 80 (121)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHH-----
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHHHHh-----
Confidence 3466777777777665
Q ss_pred CCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011692 228 GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 266 (479)
Q Consensus 228 ~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ 266 (479)
.+....+|..||.++...|+|++|+..|+++|++...
T Consensus 81 --~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 81 --DPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred --CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 3456789999999999999999999999999987653
No 141
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.91 E-value=3.9e-08 Score=96.37 Aligned_cols=161 Identities=11% Similarity=0.072 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
+..++.+|..++..|+|++|+.+|.+ |...++++.+|.+|+.+++.+... |-....
T Consensus 101 ~~~~~~la~~~~~~g~~~~Al~~l~~-------------~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~--------- 158 (291)
T 3mkr_A 101 TTFLLMAASIYFYDQNPDAALRTLHQ-------------GDSLECMAMTVQILLKLDRLDLARKELKKMQD--------- 158 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTT-------------CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhC-------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh---------
Confidence 45688999999999999999999987 456679999999999986653210 000000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
.++.... .....+ ...--...++++.|+.+|+.++..
T Consensus 159 ---------~~p~~~~----~~l~~a-----------------------------~~~l~~~~~~~~eA~~~~~~~l~~- 195 (291)
T 3mkr_A 159 ---------QDEDATL----TQLATA-----------------------------WVSLAAGGEKLQDAYYIFQEMADK- 195 (291)
T ss_dssp ---------HCTTCHH----HHHHHH-----------------------------HHHHHHCTTHHHHHHHHHHHHHHH-
T ss_pred ---------hCcCcHH----HHHHHH-----------------------------HHHHHhCchHHHHHHHHHHHHHHh-
Confidence 0000000 000000 000000114455555555544433
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH-HHHHHHHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE-AIPYCQKA 302 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee-Ai~~~ekA 302 (479)
.+..+.+|++||.+++.+|+|++|+..|+++|.+.. ++ +++|++||.++...|++.+ +..+|+++
T Consensus 196 ------~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p-----~~---~~~l~~l~~~~~~~g~~~eaa~~~~~~~ 261 (291)
T 3mkr_A 196 ------CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDS-----GH---PETLINLVVLSQHLGKPPEVTNRYLSQL 261 (291)
T ss_dssp ------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC---HHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345688999999999999999999999999998853 33 5789999999999999987 56888888
Q ss_pred HHH
Q 011692 303 ISV 305 (479)
Q Consensus 303 L~I 305 (479)
+++
T Consensus 262 ~~~ 264 (291)
T 3mkr_A 262 KDA 264 (291)
T ss_dssp HHH
T ss_pred HHh
Confidence 865
No 142
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.91 E-value=1.3e-08 Score=84.83 Aligned_cols=90 Identities=13% Similarity=0.063 Sum_probs=76.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.+..++ + ..+....++..||.++...|+|++|+..|++++.+. ++++....++++||.+|
T Consensus 16 ~~~~~A~~~~~~~~~~~---p-~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~~~~~la~~~ 86 (129)
T 2xev_A 16 GKYDDASQLFLSFLELY---P-NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY-----PTHDKAAGGLLKLGLSQ 86 (129)
T ss_dssp TCHHHHHHHHHHHHHHC---S-SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHC---C-CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC-----CCCcccHHHHHHHHHHH
Confidence 56778888887776543 2 234566899999999999999999999999999863 56667789999999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
..+|++++|+.+|++++..
T Consensus 87 ~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 87 YGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 9999999999999998865
No 143
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.90 E-value=7.8e-08 Score=79.95 Aligned_cols=118 Identities=18% Similarity=0.121 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCc
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKD 146 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~d 146 (479)
..++.+|..++..|+|++|+.+|.+++.+ .+.++....+++++|.+++..
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~------------------------- 52 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYAT------------------------- 52 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHh-------------------------
Confidence 35788999999999999999999999986 345666668999999999875
Q ss_pred cccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHh
Q 011692 147 DSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKH 226 (479)
Q Consensus 147 e~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~ 226 (479)
++++.|...|+.++.++-
T Consensus 53 ------------------------------------------------------------~~~~~A~~~~~~~~~~~p-- 70 (129)
T 2xev_A 53 ------------------------------------------------------------RNFQLAEAQFRDLVSRYP-- 70 (129)
T ss_dssp ------------------------------------------------------------TCHHHHHHHHHHHHHHCT--
T ss_pred ------------------------------------------------------------ccHHHHHHHHHHHHHHCC--
Confidence 457788888888776542
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 227 WGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 227 ~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
.......++..||.++..+|+|++|+..|++++.+. |+++....+..+|.
T Consensus 71 --~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~ 120 (129)
T 2xev_A 71 --THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERLQ 120 (129)
T ss_dssp --TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHH
T ss_pred --CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHHH
Confidence 223458899999999999999999999999999874 45555444444443
No 144
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.8e-08 Score=85.11 Aligned_cols=118 Identities=16% Similarity=0.161 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..++.+|..++..|+|++|+.+|.+++++ .+.++....+|+++|.+++..
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~----------------------- 78 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKL----------------------- 78 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHH-----------------------
Confidence 3678899999999999999999999999986 222333489999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|...|+.++.+.
T Consensus 79 --------------------------------------------------------------~~~~~A~~~~~~~~~~~- 95 (148)
T 2dba_A 79 --------------------------------------------------------------EDYDKAETEASKAIEKD- 95 (148)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHHHT-
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHhhC-
Confidence 35777888888877652
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 287 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 287 (479)
+....+|..+|.++..+++|++|+..|++++.+. ++++ .++..|+.+..
T Consensus 96 ------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-----p~~~---~~~~~l~~~~~ 144 (148)
T 2dba_A 96 ------GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE-----PKNK---VFQEALRNISG 144 (148)
T ss_dssp ------SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----SSCH---HHHHHHHHHHC
T ss_pred ------ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCcH---HHHHHHHHHHh
Confidence 2347899999999999999999999999999874 3333 45555555544
No 145
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.86 E-value=1e-08 Score=91.06 Aligned_cols=135 Identities=14% Similarity=0.155 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..+..+|..++.+|+|++|+.+|.+++.+ .|....+++.+|..+...++.+...-.. .
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~----------- 97 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVL--------DTTSAEAYYILGSANFMIDEKQAAIDAL--Q----------- 97 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHH--H-----------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CchhHHHHHHHHHHHHHcCCHHHHHHHH--H-----------
Confidence 678899999999999999999999999987 7888999999999998875432210000 0
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
.... ..+... ... -..+..-...++++.|.+.|+.++.+
T Consensus 98 -~a~~--~~~~~~-----------------~~~------------------~~lg~~~~~~g~~~~A~~~~~~~l~~--- 136 (184)
T 3vtx_A 98 -RAIA--LNTVYA-----------------DAY------------------YKLGLVYDSMGEHDKAIEAYEKTISI--- 136 (184)
T ss_dssp -HHHH--HCTTCH-----------------HHH------------------HHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred -HHHH--hCccch-----------------HHH------------------HHHHHHHHHhCCchhHHHHHHHHHHh---
Confidence 0000 000000 000 00000011235666676666666554
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 266 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ 266 (479)
.+..+.+|.+||.++..+|+|++|+.+|++||++.+.
T Consensus 137 ----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 137 ----KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred ----cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 3556889999999999999999999999999998654
No 146
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.85 E-value=2.2e-08 Score=82.73 Aligned_cols=84 Identities=18% Similarity=0.117 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 011692 208 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 287 (479)
Q Consensus 208 dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 287 (479)
+++.|..+|+.++.+ .+....+|..||.++...++|++|+..|++++.+.. ..+.++++||.+|.
T Consensus 31 ~~~~A~~~~~~al~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~la~~~~ 95 (133)
T 2lni_A 31 DYPQAMKHYTEAIKR-------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP--------TFIKGYTRKAAALE 95 (133)
T ss_dssp CSHHHHHHHHHHHTT-------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--------CchHHHHHHHHHHH
Confidence 455566666555432 344588999999999999999999999999998732 23578999999999
Q ss_pred cCCChhHHHHHHHHHHHHH
Q 011692 288 IGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 288 ~~g~~eeAi~~~ekAL~I~ 306 (479)
..+++++|+.+|++++.+.
T Consensus 96 ~~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 96 AMKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp HTTCHHHHHHHHHHHHHHC
T ss_pred HHhhHHHHHHHHHHHHHhC
Confidence 9999999999999998763
No 147
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.85 E-value=4.6e-09 Score=96.33 Aligned_cols=99 Identities=11% Similarity=0.002 Sum_probs=79.2
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCCCC
Q 011692 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (479)
Q Consensus 78 ~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (479)
..+.|++|+.+|.+|+++ +|..+++|+++|.+|+.+++.+..
T Consensus 14 r~~~feeA~~~~~~Ai~l--------~P~~aea~~n~G~~l~~l~~~~~g------------------------------ 55 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKS--------NPLDADNLTRWGGVLLELSQFHSI------------------------------ 55 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSCH------------------------------
T ss_pred HHhHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHhcccchh------------------------------
Confidence 456799999999999999 899999999999999998765210
Q ss_pred CcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 011692 158 STASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDIL 237 (479)
Q Consensus 158 a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~ 237 (479)
..|.++++.|+..|++.+...+..+++|
T Consensus 56 ----------------------------------------------------~~al~~~~eAi~~le~AL~ldP~~~~A~ 83 (158)
T 1zu2_A 56 ----------------------------------------------------SDAKQMIQEAITKFEEALLIDPKKDEAV 83 (158)
T ss_dssp ----------------------------------------------------HHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred ----------------------------------------------------hhhHhHHHHHHHHHHHHHHhCcCcHHHH
Confidence 1134455555566655554467789999
Q ss_pred HHHHHHHHhcC-----------CHHHHHHHHHHHHHHHHH
Q 011692 238 SALAEVALERE-----------DIETSLSDYQKALTILER 266 (479)
Q Consensus 238 ~~LGev~le~g-----------~yeeAl~dy~kAL~I~~~ 266 (479)
++||.+|..+| +|++|+.+|++||+|...
T Consensus 84 ~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 84 WCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 99999999885 899999999999999653
No 148
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.81 E-value=7.4e-08 Score=94.43 Aligned_cols=170 Identities=13% Similarity=0.044 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCc--CCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP--LVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdv--LG~~~~~~~e~~~~~ 143 (479)
...+..++..+...+++++|+..|.+.+.. ..+|..+.+++.+|.+|+..++.+... |.. +
T Consensus 65 ~~a~~~la~~~~~~~~~~~A~~~l~~ll~~------~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-~---------- 127 (291)
T 3mkr_A 65 LQAVRMFAEYLASHSRRDAIVAELDREMSR------SVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-G---------- 127 (291)
T ss_dssp HHHHHHHHHHHHCSTTHHHHHHHHHHHHHS------CCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-C----------
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHhc------ccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-C----------
Confidence 456667888888999999999999998864 236889999999999999986653321 100 0
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
... +... ..+..--..++++.|...|+.++.+.
T Consensus 128 ------------~~~-----------------~~~~------------------~l~~~~~~~g~~~~A~~~l~~~~~~~ 160 (291)
T 3mkr_A 128 ------------DSL-----------------ECMA------------------MTVQILLKLDRLDLARKELKKMQDQD 160 (291)
T ss_dssp ------------CSH-----------------HHHH------------------HHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ------------CCH-----------------HHHH------------------HHHHHHHHCCCHHHHHHHHHHHHhhC
Confidence 000 0000 00000112366777877777776652
Q ss_pred HHhcCCc-chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 224 EKHWGDS-MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 224 ek~~~~~-~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
++.. ..++.+| ..++...|+|++|+..|++++.+. |++ +.+|+++|.+|..+|++++|+.+|+++
T Consensus 161 ---p~~~~~~l~~a~---~~l~~~~~~~~eA~~~~~~~l~~~-----p~~---~~~~~~la~~~~~~g~~~eA~~~l~~a 226 (291)
T 3mkr_A 161 ---EDATLTQLATAW---VSLAAGGEKLQDAYYIFQEMADKC-----SPT---LLLLNGQAACHMAQGRWEAAEGVLQEA 226 (291)
T ss_dssp ---TTCHHHHHHHHH---HHHHHCTTHHHHHHHHHHHHHHHS-----CCC---HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---cCcHHHHHHHHH---HHHHhCchHHHHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 2210 1122222 233456699999999999999872 233 579999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 011692 303 ISVCKSRVQRL 313 (479)
Q Consensus 303 L~I~k~rl~~l 313 (479)
|.+.......+
T Consensus 227 l~~~p~~~~~l 237 (291)
T 3mkr_A 227 LDKDSGHPETL 237 (291)
T ss_dssp HHHCTTCHHHH
T ss_pred HHhCCCCHHHH
Confidence 98765443333
No 149
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.80 E-value=7.5e-08 Score=77.95 Aligned_cols=84 Identities=25% Similarity=0.316 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|.++|+.++.+. +....++..||.++...|+|++|+..|++++.+. +.+ ..++++||.+|
T Consensus 23 ~~~~~A~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~la~~~ 87 (125)
T 1na0_A 23 GDYDEAIEYYQKALELD-------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-----PNN---AEAWYNLGNAY 87 (125)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHC-------cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----Ccc---HHHHHHHHHHH
Confidence 45777888887776542 2346789999999999999999999999999863 222 57899999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
...+++++|+.+|++++.+
T Consensus 88 ~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHh
Confidence 9999999999999999876
No 150
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.79 E-value=8.6e-08 Score=78.24 Aligned_cols=84 Identities=19% Similarity=0.217 Sum_probs=70.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.++.+. +..+.+|..+|.++...++|++|+..|++++.+. +++ ..+++++|.+|
T Consensus 26 ~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~~~~~ 90 (131)
T 2vyi_A 26 ENFEAAVHFYGKAIELN-------PANAVYFCNRAAAYSKLGNYAGAVQDCERAICID-----PAY---SKAYGRMGLAL 90 (131)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-----ccC---HHHHHHHHHHH
Confidence 45777877777776542 2347899999999999999999999999999873 222 57899999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
...+++++|+.+|++++.+
T Consensus 91 ~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 91 SSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHhc
Confidence 9999999999999999976
No 151
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.79 E-value=9.2e-09 Score=86.06 Aligned_cols=88 Identities=9% Similarity=-0.013 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.|+.+. ...+..+.+|.+||.++..+|+|++|+..|++++++.. ++ +.+|++||.+|
T Consensus 4 g~~~~A~~~~~~al~~~----~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~l~~~~ 71 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASG----LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFP-----NH---QALRVFYAMVL 71 (117)
T ss_dssp ---CCCHHHHHHHHSSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcC----CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----Cc---hHHHHHHHHHH
Confidence 45556666666665431 01367889999999999999999999999999998843 23 68999999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
...|++++|+.+|+++|.+.
T Consensus 72 ~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 72 YNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999763
No 152
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.77 E-value=3.3e-09 Score=97.28 Aligned_cols=83 Identities=19% Similarity=0.192 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 011692 216 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDI----------ETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 285 (479)
Q Consensus 216 Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~y----------eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 285 (479)
|+.|+..|++.....+..+++|+++|.+++++++| ++|+..|++||+|... .+.+||+||.+
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~--------~~~A~~~LG~a 89 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK--------KDEAVWCIGNA 89 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT--------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC--------cHHHHHHHHHH
Confidence 34444444444433567899999999999999886 5999999999999654 36999999999
Q ss_pred HHcCC-----------ChhHHHHHHHHHHHHH
Q 011692 286 LEIGS-----------KPQEAIPYCQKAISVC 306 (479)
Q Consensus 286 y~~~g-----------~~eeAi~~~ekAL~I~ 306 (479)
|..+| +|++|+.+|++||++-
T Consensus 90 y~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 90 YTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 99875 8999999999999873
No 153
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.77 E-value=1.1e-07 Score=81.79 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=71.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.++.+. +....+|..+|.++...|+|++|+..|++++.+.. ..+.+|+++|.+|
T Consensus 27 ~~~~~A~~~~~~al~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--------~~~~~~~~~a~~~ 91 (166)
T 1a17_A 27 KDYENAIKFYSQAIELN-------PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK--------KYIKGYYRRAASN 91 (166)
T ss_dssp TCHHHHHHHHHHHHHHS-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--------ccHHHHHHHHHHH
Confidence 46777888887777652 33578999999999999999999999999999842 2358899999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
...|++++|+.+|++++.+
T Consensus 92 ~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 92 MALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHh
Confidence 9999999999999999976
No 154
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.76 E-value=5.3e-08 Score=88.06 Aligned_cols=107 Identities=18% Similarity=0.147 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
+..++.+|..++..|+|++|+.+|.+|+++ +|..+.+|+++|.+++..
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~lg~~~~~~------------------------ 84 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINR--------DKHLAVAYFQRGMLYYQT------------------------ 84 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT------------------------
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHc------------------------
Confidence 457899999999999999999999999998 688899999999999875
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|++.|+.++.+...
T Consensus 85 -------------------------------------------------------------~~~~~A~~~~~~al~~~~~ 103 (213)
T 1hh8_A 85 -------------------------------------------------------------EKYDLAIKDLKEALIQLRG 103 (213)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHTTTT
T ss_pred -------------------------------------------------------------ccHHHHHHHHHHHHHhCCC
Confidence 3577788888888776533
Q ss_pred hc---------CCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011692 226 HW---------GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 265 (479)
Q Consensus 226 ~~---------~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~ 265 (479)
.. ...+..+.+|.+||.++..+|+|++|+.+|++++.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 104 NQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp CSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred ccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCc
Confidence 21 02356789999999999999999999999999998743
No 155
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.76 E-value=1.7e-08 Score=80.72 Aligned_cols=85 Identities=14% Similarity=0.072 Sum_probs=70.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.++.+. +....+|..+|.++...++|++|+..|++++.+.. . .....++++||.+|
T Consensus 20 ~~~~~A~~~~~~a~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-----~-~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLD-------PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIE-----D-EYNKDVWAAKADAL 86 (112)
T ss_dssp CCHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC-----C-TTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhC-------cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc-----c-cchHHHHHHHHHHH
Confidence 56778888888777652 23467899999999999999999999999998732 2 11358899999999
Q ss_pred HcC-CChhHHHHHHHHHHH
Q 011692 287 EIG-SKPQEAIPYCQKAIS 304 (479)
Q Consensus 287 ~~~-g~~eeAi~~~ekAL~ 304 (479)
... +++++|+.+|++++.
T Consensus 87 ~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGG
T ss_pred HHHhCCHHHHHHHHHHHhh
Confidence 999 999999999998875
No 156
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=5.6e-08 Score=81.93 Aligned_cols=88 Identities=17% Similarity=0.139 Sum_probs=69.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|+.++.+. ........+|..||.++...++|++|+..|++++.+. +++ ..+|+++|.+|
T Consensus 42 ~~~~~A~~~~~~a~~~~----~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~a~~~ 109 (148)
T 2dba_A 42 GDYGGALAAYTQALGLD----ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-----GGD---VKALYRRSQAL 109 (148)
T ss_dssp TCHHHHHHHHHHHHTSC----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-----SCC---HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHc----ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-----ccC---HHHHHHHHHHH
Confidence 45666655555554321 1112348999999999999999999999999999873 222 68999999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
...+++++|+.+|++++.+.
T Consensus 110 ~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 110 EKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHTCHHHHHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHHHHHcC
Confidence 99999999999999999763
No 157
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.75 E-value=1.7e-07 Score=95.59 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=76.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhc---------CCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHW---------GDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAE 277 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~---------~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAe 277 (479)
++++.|...|+.|+.++.... ...+..+.+|.+||.+++.+++|++|+.+|+++|++. +..+.
T Consensus 237 g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~--------p~~~~ 308 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID--------PSNTK 308 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--------TTCHH
T ss_pred cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC--------chhHH
Confidence 467778888888888765531 1235678999999999999999999999999999863 23478
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 278 LNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 278 a~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+||+||.+|..+++|++|+.+|++|+.+
T Consensus 309 a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 309 ALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999975
No 158
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.74 E-value=1.5e-08 Score=86.45 Aligned_cols=85 Identities=9% Similarity=0.037 Sum_probs=69.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|...|+.++.+ .+..+.+|..||.++..+|+|++|+..|+++|++... + ..+|++||.+|
T Consensus 31 g~~~~A~~~~~~al~~-------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-----~---~~~~~~la~~~ 95 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQK-------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK-----D---IAVHAALAVSH 95 (121)
T ss_dssp TCHHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----C---HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----C---HHHHHHHHHHH
Confidence 5566666666665543 4567889999999999999999999999999998433 2 47999999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
...|++++|+.+|+++|.+.
T Consensus 96 ~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999998764
No 159
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.74 E-value=1.2e-07 Score=76.14 Aligned_cols=84 Identities=15% Similarity=0.108 Sum_probs=70.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|..+|+.++.+. +....++..+|.++..+|+|++|+..|++++.+.. + ...+++++|.+|
T Consensus 18 ~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~---~~~~~~~~a~~~ 82 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLD-------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP-----D---WGKGYSRKAAAL 82 (118)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHC-------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc-----c---cHHHHHHHHHHH
Confidence 46777888887776542 23477999999999999999999999999998732 2 257899999999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
...|++++|+.+|++++.+
T Consensus 83 ~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHHhhHHHHHHHHHHHHHc
Confidence 9999999999999998865
No 160
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.74 E-value=4.5e-08 Score=81.04 Aligned_cols=80 Identities=11% Similarity=0.061 Sum_probs=66.5
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHH
Q 011692 220 RAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 299 (479)
Q Consensus 220 r~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ 299 (479)
+..|.+.+...+..+.+|+.||.+++..|+|++|+..|++++.+.. ..+.+|++||.+|...|++++|+.+|
T Consensus 5 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~g~~~~A~~~~ 76 (115)
T 2kat_A 5 TERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP--------TYSVAWKWLGKTLQGQGDRAGARQAW 76 (115)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------TCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC--------CcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3344444443456688999999999999999999999999998742 23679999999999999999999999
Q ss_pred HHHHHHHH
Q 011692 300 QKAISVCK 307 (479)
Q Consensus 300 ekAL~I~k 307 (479)
++++.+..
T Consensus 77 ~~al~~~~ 84 (115)
T 2kat_A 77 ESGLAAAQ 84 (115)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99998754
No 161
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.73 E-value=1.3e-07 Score=87.91 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCC
Q 011692 66 ADELMEKGTNALKES----DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (479)
Q Consensus 66 A~~L~~~G~~~~~~g----dyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~ 141 (479)
+..++.+|..++. + +|++|+.+|.+|++. ..+.+++++|.+|+.- .
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~----------g~~~a~~~Lg~~y~~g---------~---------- 99 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEA----------GSKSGEIVLARVLVNR---------Q---------- 99 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHTCG---------G----------
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHcC---------C----------
Confidence 4567888888777 7 999999999999763 4577999999988642 0
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~ 221 (479)
....|+..|.++|+.|..
T Consensus 100 --------------------------------------------------------------g~~~d~~~A~~~~~~A~~ 117 (212)
T 3rjv_A 100 --------------------------------------------------------------AGATDVAHAITLLQDAAR 117 (212)
T ss_dssp --------------------------------------------------------------GSSCCHHHHHHHHHHHTS
T ss_pred --------------------------------------------------------------CCccCHHHHHHHHHHHHH
Confidence 001467777777766653
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC------CC
Q 011692 222 IAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------SK 291 (479)
Q Consensus 222 Iyek~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~------g~ 291 (479)
+ ++....+.++++||.+|.. ..++++|+..|++|+++. .+ +.++++||.+|... .+
T Consensus 118 ~-----~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~------~~---~~a~~~Lg~~y~~g~gg~~~~d 183 (212)
T 3rjv_A 118 D-----SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLS------RT---GYAEYWAGMMFQQGEKGFIEPN 183 (212)
T ss_dssp S-----TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTS------CT---THHHHHHHHHHHHCBTTTBCCC
T ss_pred c-----CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcC------CC---HHHHHHHHHHHHcCCCCCCCCC
Confidence 1 1111458999999999999 899999999999998761 12 35899999999864 28
Q ss_pred hhHHHHHHHHHHHH
Q 011692 292 PQEAIPYCQKAISV 305 (479)
Q Consensus 292 ~eeAi~~~ekAL~I 305 (479)
+++|+.+|++|++.
T Consensus 184 ~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 184 KQKALHWLNVSCLE 197 (212)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999875
No 162
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.72 E-value=1.5e-07 Score=91.90 Aligned_cols=81 Identities=11% Similarity=0.086 Sum_probs=58.3
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHH
Q 011692 217 DVARAIAEKHWGDSMEKVDILSALAEVALE-REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 295 (479)
Q Consensus 217 e~Ar~Iyek~~~~~~~~A~v~~~LGev~le-~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeA 295 (479)
+.|+.+|.+.....+....+|..++.+... .|++++|+..|+++|++... + +..++++|..+..+|++++|
T Consensus 151 ~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~-----~---~~~~~~~~~~~~~~g~~~~A 222 (308)
T 2ond_A 151 KSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGD-----I---PEYVLAYIDYLSHLNEDNNT 222 (308)
T ss_dssp HHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTT-----C---HHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----c---HHHHHHHHHHHHHCCCHHHH
Confidence 344445544433223345666666655433 79999999999999987532 2 57889999999999999999
Q ss_pred HHHHHHHHHH
Q 011692 296 IPYCQKAISV 305 (479)
Q Consensus 296 i~~~ekAL~I 305 (479)
+.+|++|+..
T Consensus 223 ~~~~~~al~~ 232 (308)
T 2ond_A 223 RVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999999863
No 163
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.70 E-value=4.3e-08 Score=80.41 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=61.1
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Q 011692 231 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 231 ~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
+..+.+|+.||.+++.+|+|++|+..|+++|++... ...+|++||.+|...|++++|+.+|+++|.+..
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD--------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT--------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 445789999999999999999999999999998533 247999999999999999999999999998754
No 164
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.68 E-value=6.9e-08 Score=77.04 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCcc
Q 011692 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (479)
Q Consensus 68 ~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de 147 (479)
.++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~a~~~~~~-------------------------- 53 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQL--------DPEESKYWLMKGKALYNL-------------------------- 53 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHT--------------------------
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHc--------------------------
Confidence 4677899999999999999999999998 577788999999999875
Q ss_pred ccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011692 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 227 (479)
Q Consensus 148 ~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~ 227 (479)
++++.|...|+.++.+.
T Consensus 54 -----------------------------------------------------------~~~~~A~~~~~~a~~~~---- 70 (112)
T 2kck_A 54 -----------------------------------------------------------ERYEEAVDCYNYVINVI---- 70 (112)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHTS----
T ss_pred -----------------------------------------------------------cCHHHHHHHHHHHHHhC----
Confidence 35677888887776542
Q ss_pred CCcch--HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHH
Q 011692 228 GDSME--KVDILSALAEVALER-EDIETSLSDYQKALTI 263 (479)
Q Consensus 228 ~~~~~--~A~v~~~LGev~le~-g~yeeAl~dy~kAL~I 263 (479)
+. ...++..||.++... |+|++|+.+|++++..
T Consensus 71 ---~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 71 ---EDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp ---CCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred ---cccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 33 578999999999999 9999999999998765
No 165
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.66 E-value=1.1e-07 Score=92.53 Aligned_cols=86 Identities=21% Similarity=0.111 Sum_probs=73.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++|+.|...|+.|+.+ .+..+.+|.+||.++..+|+|++|+.+|++++.+. |.-+.+|++||.+|
T Consensus 18 g~~~~A~~~~~~al~~-------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 18 RKYPEAAACYGRAITR-------NPLVAVYYTNRALCYLKMQQPEQALADCRRALELD--------GQSVKAHFFLGQCQ 82 (281)
T ss_dssp TCHHHHHHHHHHHHHH-------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC--------TTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHH
Confidence 4677788888877765 23467899999999999999999999999999873 23358999999999
Q ss_pred HcCCChhHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k 307 (479)
..+|+|++|+.+|++++.+..
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCc
Confidence 999999999999999999865
No 166
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.64 E-value=1.9e-07 Score=92.97 Aligned_cols=148 Identities=9% Similarity=0.011 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
-.-.+..+..+...|+|++|.++|..++.. +|... .+|.+|..+++.
T Consensus 102 ~dl~LayA~~L~~~g~y~eA~~~l~~~~~~--------~p~~~-~~~~~a~l~~~~------------------------ 148 (282)
T 4f3v_A 102 LAITMGFAACEAAQGNYADAMEALEAAPVA--------GSEHL-VAWMKAVVYGAA------------------------ 148 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTSSCCT--------TCHHH-HHHHHHHHHHHT------------------------
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CCchH-HHHHHHHHHHHc------------------------
Confidence 344567788899999999999999988873 57777 889999877764
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++++.|..+|+.+...
T Consensus 149 -------------------------------------------------------------~r~~dA~~~l~~a~~~--- 164 (282)
T 4f3v_A 149 -------------------------------------------------------------ERWTDVIDQVKSAGKW--- 164 (282)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHTTGGGC---
T ss_pred -------------------------------------------------------------CCHHHHHHHHHHhhcc---
Confidence 3455555555422110
Q ss_pred hcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
........+|+.||.++..+|+|++|+..|++++. ++..|. ..+++|++|+||..+|+.++|+.+|++++.
T Consensus 165 --~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a 236 (282)
T 4f3v_A 165 --PDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQT 236 (282)
T ss_dssp --SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred --CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 01112367999999999999999999999999872 333244 778999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhh
Q 011692 305 VCKSRVQRLLNEVKSL 320 (479)
Q Consensus 305 I~k~rl~~l~~~l~~~ 320 (479)
+... ......|...
T Consensus 237 ~~P~--~~~~~aL~~~ 250 (282)
T 4f3v_A 237 THPE--PKVAAALKDP 250 (282)
T ss_dssp HSCC--HHHHHHHHCT
T ss_pred cCCc--HHHHHHHhCC
Confidence 8665 5555555544
No 167
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.64 E-value=2.2e-07 Score=92.54 Aligned_cols=176 Identities=9% Similarity=-0.039 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHH-------HHHHHhhhhccCCcCCC---CC
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQY-------GRALLYKAQEEADPLVS---VP 133 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~Y-------G~ALl~~ar~esdvLG~---~~ 133 (479)
+.+..+|..|.-+ .-+|+..|..+|.+|+++ +|.++++++.+ |.+|..+.+.. +.||. ..
T Consensus 5 ~~~~~~~~~~~~~-~~~d~~~A~~~F~~a~~~--------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~-~a~~~~~~~l 74 (282)
T 4f3v_A 5 DRLASLFESAVSM-LPMSEARSLDLFTEITNY--------DESACDAWIGRIRCGDTDRVTLFRAWYSR-RNFGQLSGSV 74 (282)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHTTCCCHHHHHHHHHTG-GGTTHHHHTT
T ss_pred HHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHh--------ChhhhHHHHhHHHccCCcHHHHHHHHHHH-HHHHHHHHHh
Confidence 4578889999876 689999999999999999 99999999999 99999998874 34442 11
Q ss_pred CCcCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHH
Q 011692 134 KKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAW 213 (479)
Q Consensus 134 ~~~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Aw 213 (479)
... ..... . .....+-. + +..---..-+++-+++
T Consensus 75 ~l~---------p~~l~-------------a----------~~~~~g~y-~-------------~~~~~v~~r~dl~Lay 108 (282)
T 4f3v_A 75 QIS---------MSTLN-------------A----------RIAIGGLY-G-------------DITYPVTSPLAITMGF 108 (282)
T ss_dssp TCC---------GGGGC-------------C----------EEECCTTT-C-------------CCEEECSSHHHHHHHH
T ss_pred cCC---------hhhhh-------------h----------hhccCCcc-c-------------ccccccCCHhHHHHHH
Confidence 000 00000 0 00000000 0 0000001123444444
Q ss_pred HH-------HHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHH
Q 011692 214 KM-------LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLC 285 (479)
Q Consensus 214 e~-------Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~a 285 (479)
-. |+.|+.+|.......+... +++.+|.++++.++|++|+.+|++++.+ .++. -+.+||+||.+
T Consensus 109 A~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~-------~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 109 AACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKW-------PDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGC-------SCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhcc-------CCcccHHHHHHHHHHH
Confidence 32 3667777776655556666 9999999999999999999999866433 1343 35799999999
Q ss_pred HHcCCChhHHHHHHHHHH
Q 011692 286 LEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 286 y~~~g~~eeAi~~~ekAL 303 (479)
|..+|++++|+.+|++++
T Consensus 181 l~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 181 AANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHh
Confidence 999999999999999986
No 168
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.61 E-value=1.1e-07 Score=79.43 Aligned_cols=90 Identities=12% Similarity=0.035 Sum_probs=72.9
Q ss_pred HcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccccCCCC
Q 011692 78 KESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNAVNGES 157 (479)
Q Consensus 78 ~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~~~~e~ 157 (479)
.+|+|++|+.+|.+|+++ +..+|..+.+|+.+|.+|+.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~------------------------------------ 40 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTL------------------------------------ 40 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHT------------------------------------
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHc------------------------------------
Confidence 478999999999999985 233599999999999999875
Q ss_pred CcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 011692 158 STASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDIL 237 (479)
Q Consensus 158 a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~ 237 (479)
++++.|...|+.++.++ +....+|
T Consensus 41 -------------------------------------------------~~~~~A~~~~~~al~~~-------p~~~~~~ 64 (117)
T 3k9i_A 41 -------------------------------------------------GEYRKAEAVLANGVKQF-------PNHQALR 64 (117)
T ss_dssp -------------------------------------------------TCHHHHHHHHHHHHHHC-------TTCHHHH
T ss_pred -------------------------------------------------CCHHHHHHHHHHHHHhC-------CCchHHH
Confidence 45778888888887663 3457899
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 238 SALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 238 ~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
.+||.++..+|+|++|+..|+++|.+.
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999875
No 169
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.61 E-value=3.1e-07 Score=89.57 Aligned_cols=31 Identities=10% Similarity=0.118 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011692 83 GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 83 eeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
.+|+.+|.+|+.+ +|..+.+|+.||..+...
T Consensus 33 ~~a~~~~~~al~~--------~p~~~~~w~~~~~~~~~~ 63 (308)
T 2ond_A 33 KRVMFAYEQCLLV--------LGHHPDIWYEAAQYLEQS 63 (308)
T ss_dssp HHHHHHHHHHHHH--------HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHh
Confidence 7899999999998 699999999999999865
No 170
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.59 E-value=1.5e-07 Score=86.95 Aligned_cols=86 Identities=9% Similarity=0.053 Sum_probs=72.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHH----------------HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA----------------LAEVALEREDIETSLSDYQKALTILERMVEP 270 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~----------------LGev~le~g~yeeAl~dy~kAL~I~~~llg~ 270 (479)
++++.|...|+.++.+. +..+.+|.. ||.++..+|+|++|+..|+++|++...
T Consensus 18 g~~~~A~~~~~~al~~~-------p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---- 86 (208)
T 3urz_A 18 GQNGQAVSYFRQTIALN-------IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN---- 86 (208)
T ss_dssp TCHHHHHHHHHHHHHHC-------HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----
T ss_pred CCHHHHHHHHHHHHHhC-------CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC----
Confidence 67888888887776653 345566666 999999999999999999999998432
Q ss_pred CChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Q 011692 271 DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 271 d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
-+.+|++||.+|...|++++|+.+|+++|.+-.
T Consensus 87 ----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P 119 (208)
T 3urz_A 87 ----NVDCLEACAEMQVCRGQEKDALRMYEKILQLEA 119 (208)
T ss_dssp ----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred ----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 258999999999999999999999999998754
No 171
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.58 E-value=1e-06 Score=77.91 Aligned_cols=100 Identities=20% Similarity=0.261 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHH-hhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALL-YKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl-~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
+..++.+|..++..|+|++|+.+|.+++++ .|....+|+.+|.+|+ ..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~l~~~~----------------------- 92 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQL--------RGENAELYAALATVLYYQA----------------------- 92 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------HCSCHHHHHHHHHHHHHHT-----------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhc-----------------------
Confidence 567899999999999999999999999998 4777889999999954 43
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChH--HHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDL--DLAWKMLDVARAI 222 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dl--e~Awe~Le~Ar~I 222 (479)
+++ +.|..+|+.++.+
T Consensus 93 --------------------------------------------------------------~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 93 --------------------------------------------------------------SQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp --------------------------------------------------------------TTCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCcchHHHHHHHHHHHHh
Confidence 123 5677777777655
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 265 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~ 265 (479)
. +....+|..||.++...|+|++|+..|++++.+..
T Consensus 111 ~-------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 146 (177)
T 2e2e_A 111 D-------SNEITALMLLASDAFMQANYAQAIELWQKVMDLNS 146 (177)
T ss_dssp C-------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred C-------CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Confidence 2 34567899999999999999999999999998743
No 172
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.57 E-value=1.3e-07 Score=76.21 Aligned_cols=65 Identities=11% Similarity=0.110 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.+.+|..+|.++...|+|++|+..|+++|.+.. ++ +.+|++||.+|..+|+|++|+.+|+++|.+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP-----QN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-----CC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999833 22 588999999999999999999999999875
No 173
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.55 E-value=1.6e-07 Score=94.16 Aligned_cols=93 Identities=15% Similarity=0.026 Sum_probs=71.3
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC--Cc--------chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWG--DS--------MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIA 276 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~--~~--------~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iA 276 (479)
++|+.|...|+.|+.+...... .. .....+|++||.+++.+++|++|+.+|+++|.+.. ..+
T Consensus 193 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p--------~~~ 264 (338)
T 2if4_A 193 EKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE--------KNP 264 (338)
T ss_dssp SCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT--------TCH
T ss_pred CCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------CCH
Confidence 5677788888887766422210 00 00125999999999999999999999999998743 236
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Q 011692 277 ELNFRICLCLEIGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 277 ea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k 307 (479)
.+||+||.+|..+++|++|+.+|++++.+..
T Consensus 265 ~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 265 KALFRRGKAKAELGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 8999999999999999999999999987643
No 174
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.53 E-value=2.8e-08 Score=80.30 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
.+..++.+|..++..|+|++|+.+|.+|+++ .|..+.+|+++|.+|+.+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~----------------------- 51 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKL----------------------- 51 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT-----------------------
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHh-----------------------
Confidence 4678899999999999999999999999998 788899999999999875
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
++++.|++.|+.++.+..
T Consensus 52 --------------------------------------------------------------g~~~~A~~~~~~al~~~p 69 (111)
T 2l6j_A 52 --------------------------------------------------------------GEYTQAIQMCQQGLRYTS 69 (111)
T ss_dssp --------------------------------------------------------------TCHHHHHHHHHHHHTSCS
T ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHHhCC
Confidence 356778888877775532
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIETSLSDYQK 259 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~k 259 (479)
... .......+|..+|.++..+|+++.|+..|++
T Consensus 70 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 70 TAE-HVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp STT-SHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred Ccc-HHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 211 1122488999999999999999888776653
No 175
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.53 E-value=1.4e-06 Score=90.21 Aligned_cols=166 Identities=16% Similarity=0.114 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCC
Q 011692 66 ADELMEKGTNALK----ESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (479)
Q Consensus 66 A~~L~~~G~~~~~----~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~ 141 (479)
+..++.+|..++. .++|++|+.+|.+|++. | .+.+++.+|..++.- .+|.++.
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~-----~-----~~~a~~~Lg~~y~~g----~g~~~~~--------- 95 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ-----G-----YTPAEYVLGLRYMNG----EGVPQDY--------- 95 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHT----SSSCCCH---------
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHHHcC----CCCCCCH---------
Confidence 6788999999998 89999999999999874 2 367999999988762 0111110
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~ 221 (479)
+....-.. ...+.+....+...+. . -..+.....+++.|..+|+.|..
T Consensus 96 ----~~A~~~~~-----------~a~~~~~~~a~~~Lg~-~----------------y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 96 ----AQAVIWYK-----------KAALKGLPQAQQNLGV-M----------------YHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp ----HHHHHHHH-----------HHHHTTCHHHHHHHHH-H----------------HHHTSSSCCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHH-----------HHHHCCCHHHHHHHHH-H----------------HHcCCCCCCCHHHHHHHHHHHHH
Confidence 00000000 0000000000000000 0 00000113577788877777643
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHc----CCChh
Q 011692 222 IAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEI----GSKPQ 293 (479)
Q Consensus 222 Iyek~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~----~g~~e 293 (479)
. ..+.++..||.+|.. .+++++|+..|+++++. .+ +.++++||.+|.. .++++
T Consensus 144 ~---------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~ 204 (490)
T 2xm6_A 144 Q---------GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-------GN---VWSCNQLGYMYSRGLGVERNDA 204 (490)
T ss_dssp T---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHH
T ss_pred C---------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHhcCCCCCcCHH
Confidence 2 347899999999998 88999999999999874 12 5899999999998 89999
Q ss_pred HHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISV 305 (479)
Q Consensus 294 eAi~~~ekAL~I 305 (479)
+|+.+|++|++.
T Consensus 205 ~A~~~~~~a~~~ 216 (490)
T 2xm6_A 205 ISAQWYRKSATS 216 (490)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHC
Confidence 999999999875
No 176
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.53 E-value=1.4e-06 Score=90.42 Aligned_cols=80 Identities=13% Similarity=0.005 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 208 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 208 dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
+++.|.++|+.|... ....++++||.+|.. .+++++|+..|++|++. .+ +.++++||
T Consensus 346 ~~~~A~~~~~~a~~~---------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~-------~~---~~a~~~Lg 406 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAK---------GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ-------GL---SAAQVQLG 406 (490)
T ss_dssp HHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHH
T ss_pred cHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC-------CC---HHHHHHHH
Confidence 566666666666532 347899999999999 89999999999999873 12 68999999
Q ss_pred HHHHc----CCChhHHHHHHHHHHHHH
Q 011692 284 LCLEI----GSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 284 ~ay~~----~g~~eeAi~~~ekAL~I~ 306 (479)
.+|.. .+++++|+.+|++|++.-
T Consensus 407 ~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 407 EIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 99998 899999999999999875
No 177
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.52 E-value=1.3e-06 Score=70.99 Aligned_cols=85 Identities=25% Similarity=0.275 Sum_probs=69.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|+.+|+.+..+. +....++..+|.++...++|++|+..|++++.+. +. ...+++++|.+|
T Consensus 15 ~~~~~A~~~~~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~---~~~~~~~l~~~~ 79 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELD-------PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-----PR---SAEAWYNLGNAY 79 (136)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcC-------CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC-----CC---chHHHHHHHHHH
Confidence 45777887777776542 2346789999999999999999999999998763 22 257899999999
Q ss_pred HcCCChhHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~ 306 (479)
...+++++|+.+|++++.+.
T Consensus 80 ~~~~~~~~A~~~~~~~~~~~ 99 (136)
T 2fo7_A 80 YKQGDYDEAIEYYQKALELD 99 (136)
T ss_dssp HTTTCHHHHHHHHHHHHHHC
T ss_pred HHhcCHHHHHHHHHHHHHhC
Confidence 99999999999999998753
No 178
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.50 E-value=4.9e-07 Score=70.37 Aligned_cols=67 Identities=24% Similarity=0.276 Sum_probs=59.9
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 231 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 231 ~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+..+.+|..||.++...++|++|+..|++++.+.. + ...++++||.+|...+++++|+.+|++++.+
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-----~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----N---NAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----T---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC-----C---CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 35678999999999999999999999999998732 2 2578999999999999999999999999976
No 179
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.40 E-value=6.1e-07 Score=94.44 Aligned_cols=86 Identities=15% Similarity=0.074 Sum_probs=76.5
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 011692 206 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLC 285 (479)
Q Consensus 206 ~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~a 285 (479)
.++++.|.+.|+.|+.+ .+..+.+|.+||.++..+|+|++|+.+|++||++. +..+.+|++||.+
T Consensus 19 ~g~~~~A~~~~~~Al~~-------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--------p~~~~~~~~lg~~ 83 (477)
T 1wao_1 19 AKDYENAIKFYSQAIEL-------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD--------KKYIKGYYRRAAS 83 (477)
T ss_dssp TTCHHHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC--------TTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHh-------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHH
Confidence 47899999999988876 24468999999999999999999999999999883 3447899999999
Q ss_pred HHcCCChhHHHHHHHHHHHHH
Q 011692 286 LEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 286 y~~~g~~eeAi~~~ekAL~I~ 306 (479)
|..+|+|++|+.+|++|+++.
T Consensus 84 ~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 84 NMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999874
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.31 E-value=2.1e-06 Score=70.83 Aligned_cols=54 Identities=13% Similarity=0.057 Sum_probs=45.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 267 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~l 267 (479)
++++.|..+|+.++.+. +....+|..||.++..+|+|++|+..|++++.+....
T Consensus 33 g~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 33 EQFDAALPHLRAALDFD-------PTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp TCHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 35777888888887652 3457899999999999999999999999999998754
No 181
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.29 E-value=2.8e-06 Score=88.22 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=61.1
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 011692 206 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERE-----DIETSLSDYQKALTILERMVEPDSRHIAELNF 280 (479)
Q Consensus 206 ~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g-----~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~ 280 (479)
.++++.|+.+|+.|.. ...+.++++||.+|. .| ++++|+..|++|+ +.+ +.+++
T Consensus 264 ~~d~~~A~~~~~~Aa~---------~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--------~g~---~~A~~ 322 (452)
T 3e4b_A 264 LGDVEQMMKYLDNGRA---------ADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV--------GRE---VAADY 322 (452)
T ss_dssp GCCHHHHHHHHHHHHH---------TTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT--------TTC---HHHHH
T ss_pred CCCHHHHHHHHHHHHH---------CCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh--------CCC---HHHHH
Confidence 3577777777776652 135788999999998 55 9999999998887 122 58999
Q ss_pred HHHHHHHc----CCChhHHHHHHHHHHHH
Q 011692 281 RICLCLEI----GSKPQEAIPYCQKAISV 305 (479)
Q Consensus 281 ~LG~ay~~----~g~~eeAi~~~ekAL~I 305 (479)
+||.+|.. ..++++|+.+|++|++.
T Consensus 323 ~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 323 YLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 99999987 34899999999998863
No 182
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.27 E-value=4.1e-06 Score=73.04 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 011692 212 AWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 287 (479)
Q Consensus 212 Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 287 (479)
|+++|++|... ..+.++++||.+|.. ..++++|+..|++|.+. . .+.++++||.+|.
T Consensus 44 A~~~~~~Aa~~---------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g---~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 44 LFQYLSKACEL---------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-------N---DQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHHHT---------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC---------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-------C---CHHHHHHHHHHHH
Confidence 77777776532 357899999999999 89999999999999864 1 2689999999999
Q ss_pred c----CCChhHHHHHHHHHHHH
Q 011692 288 I----GSKPQEAIPYCQKAISV 305 (479)
Q Consensus 288 ~----~g~~eeAi~~~ekAL~I 305 (479)
. ..++++|+.+|++|++.
T Consensus 105 ~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 105 AGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCcCHHHHHHHHHHHHHC
Confidence 9 89999999999999864
No 183
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.21 E-value=2.1e-05 Score=82.34 Aligned_cols=83 Identities=11% Similarity=0.103 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 208 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEV-ALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 208 dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev-~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
+++.|..+|+.|+. ..+....+|...+.+ +...|++++|+..|+++|++.. ++ +.++.+++..+
T Consensus 371 ~~~~A~~~~~~Al~-------~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p-----~~---~~~~~~~~~~~ 435 (530)
T 2ooe_A 371 GIKSGRMIFKKARE-------DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG-----DI---PEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHT-------CTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHT-----TC---HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-------ccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCC-----CC---HHHHHHHHHHH
Confidence 34445555555543 222234455555554 3358999999999999998753 33 47788899999
Q ss_pred HcCCChhHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I 305 (479)
...|++++|...|++|+..
T Consensus 436 ~~~g~~~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTS 454 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHS
T ss_pred HhCCCHhhHHHHHHHHHhc
Confidence 9999999999999998863
No 184
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.20 E-value=8.3e-06 Score=84.69 Aligned_cols=78 Identities=17% Similarity=0.095 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 208 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALE----REDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 208 dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le----~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
|+..|+.+|++|. +..+.++++||.+|.. ..++++|+..|++|.+. .+ +.++++||
T Consensus 302 d~~~A~~~~~~Aa----------~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~---~~A~~~Lg 361 (452)
T 3e4b_A 302 DAKAAEAHFEKAV----------GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN-------GQ---NSADFAIA 361 (452)
T ss_dssp CHHHHHHHHHTTT----------TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT-------TC---TTHHHHHH
T ss_pred CHHHHHHHHHHHh----------CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh-------Ch---HHHHHHHH
Confidence 5555555555443 2457888899988887 34888888888888752 22 57888999
Q ss_pred HHHHc----CCChhHHHHHHHHHHHH
Q 011692 284 LCLEI----GSKPQEAIPYCQKAISV 305 (479)
Q Consensus 284 ~ay~~----~g~~eeAi~~~ekAL~I 305 (479)
.+|.. ..++.+|+.+|++|.+.
T Consensus 362 ~~y~~G~g~~~d~~~A~~~~~~A~~~ 387 (452)
T 3e4b_A 362 QLFSQGKGTKPDPLNAYVFSQLAKAQ 387 (452)
T ss_dssp HHHHSCTTBCCCHHHHHHHHHHHHTT
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHC
Confidence 99885 45788899888888753
No 185
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.17 E-value=8.6e-06 Score=85.22 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHh
Q 011692 83 GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLY 120 (479)
Q Consensus 83 eeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~ 120 (479)
..|+.+|.+|+.+ .|....+|+.||..|..
T Consensus 255 ~~a~~~y~~al~~--------~p~~~~~w~~~~~~~~~ 284 (530)
T 2ooe_A 255 KRVMFAYEQCLLV--------LGHHPDIWYEAAQYLEQ 284 (530)
T ss_dssp HHHHHHHHHHHHH--------HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHH
Confidence 4788999999998 58888999999999886
No 186
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.17 E-value=4.3e-05 Score=78.84 Aligned_cols=141 Identities=12% Similarity=0.022 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCC
Q 011692 66 ADELMEKGTNALKES---DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQG 142 (479)
Q Consensus 66 A~~L~~~G~~~~~~g---dyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~ 142 (479)
|-.|+-+|..++..+ ++.+|+++|.+|+++ .|+.+.+|-.++.+++...... +.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~l--------DP~~a~A~A~la~a~~~~~~~~-------~~-------- 252 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQS--------SPEFTYARAEKALVDIVRHSQH-------PL-------- 252 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHS-------CC--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhccC-------CC--------
Confidence 667788888877765 458999999999999 8999999999888887431110 00
Q ss_pred CCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHH
Q 011692 143 SDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAI 222 (479)
Q Consensus 143 ~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~I 222 (479)
.. ..++.+..++..
T Consensus 253 ----------------------------------------------------------------~~--~~~~~l~~a~~a 266 (372)
T 3ly7_A 253 ----------------------------------------------------------------DE--KQLAALNTEIDN 266 (372)
T ss_dssp ----------------------------------------------------------------CH--HHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------ch--hhHHHHHHHHHH
Confidence 00 011222333332
Q ss_pred HHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 223 AEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 223 yek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
.. .....+..+.+|..+|.+++-.|++++|+..+++||.+. + + +.+|..+|.+|.+.|++++|+++|++|
T Consensus 267 ~~-a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln-----~-s---~~a~~llG~~~~~~G~~~eA~e~~~~A 336 (372)
T 3ly7_A 267 IV-TLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE-----M-S---WLNYVLLGKVYEMKGMNREAADAYLTA 336 (372)
T ss_dssp HH-TCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HH-hcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC-----C-C---HHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 21 222235578899999999999999999999999999994 1 2 578899999999999999999999999
Q ss_pred HHH
Q 011692 303 ISV 305 (479)
Q Consensus 303 L~I 305 (479)
+.+
T Consensus 337 lrL 339 (372)
T 3ly7_A 337 FNL 339 (372)
T ss_dssp HHH
T ss_pred Hhc
Confidence 987
No 187
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.17 E-value=3.5e-06 Score=67.29 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=54.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHH-HHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 237 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAE-LNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 237 ~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAe-a~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+..+|.+++..|+|++|+..|++++.+.. ++ +. +|++||.+|..+|++++|+.+|++++.+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEP-----VG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCS-----ST---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC-----Cc---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 35789999999999999999999998732 22 46 9999999999999999999999999976
No 188
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.16 E-value=9.8e-06 Score=67.38 Aligned_cols=72 Identities=13% Similarity=0.020 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 234 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 234 A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
+.-++.||.+++..++|.+|+.-|++||.....-.. .....+.+|++||.||..+|+++.|+.+|++++.+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 455679999999999999999999999988753321 123467999999999999999999999999999763
No 189
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.14 E-value=3e-05 Score=59.97 Aligned_cols=49 Identities=31% Similarity=0.497 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
.+..++.+|..++..|+|++|+.+|.+++++ .|....+|+++|.+++..
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~ 56 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQ 56 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHH
Confidence 3667889999999999999999999999997 677889999999999875
No 190
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.14 E-value=1.1e-05 Score=78.34 Aligned_cols=91 Identities=20% Similarity=0.138 Sum_probs=63.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-----------------------
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTI----------------------- 263 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I----------------------- 263 (479)
++++.|...|+.++.+ .+..+.++..||.+++.+|+|++|+..|++++.+
T Consensus 131 g~~~~A~~~~~~al~~-------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 131 SNYTDALPLLXDAWQL-------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp TCHHHHHHHHHHHHHH-------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCH
T ss_pred CCHHHHHHHHHHHHHh-------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCc
Confidence 3455566666555543 2345677888888888888888888777776431
Q ss_pred ----HHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 264 ----LERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 264 ----~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
+++.+. .+|.-..++++||.+|...|++++|+.+|+++|..
T Consensus 204 a~~~l~~al~-~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 204 EIQQLQQQVA-ENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHh-cCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 111110 13334689999999999999999999999999975
No 191
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.11 E-value=2.9e-05 Score=91.46 Aligned_cols=84 Identities=17% Similarity=0.098 Sum_probs=64.0
Q ss_pred CcChHHHHHHHHHHHHHHH-------------HHhcC--------CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 011692 205 DESDLDLAWKMLDVARAIA-------------EKHWG--------DSMEKVDILSALAEVALEREDIETSLSDYQKALTI 263 (479)
Q Consensus 205 d~~dle~Awe~Le~Ar~Iy-------------ek~~~--------~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I 263 (479)
..++|+.|.++|.+||.+- .+... ..+..+ .|..+|+.+...|+|++|+.+|.+|
T Consensus 1146 ~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~a-d~~~iGd~le~eg~YeeA~~~Y~kA--- 1221 (1630)
T 1xi4_A 1146 TSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNA-HIQQVGDRCYDEKMYDAAKLLYNNV--- 1221 (1630)
T ss_pred HcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHH-HHHHHHHHHHhcCCHHHHHHHHHhh---
Confidence 3467888888888887332 22100 012233 4557999999999999999999985
Q ss_pred HHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 264 LERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 264 ~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
..|.+|+.+|.++|+|++|+++|++|...
T Consensus 1222 -------------~ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1222 -------------SNFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred -------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 57889999999999999999999998665
No 192
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.03 E-value=3.8e-06 Score=74.86 Aligned_cols=89 Identities=13% Similarity=0.085 Sum_probs=65.5
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH--------------HhcCC------------
Q 011692 217 DVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE--------------RMVEP------------ 270 (479)
Q Consensus 217 e~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~--------------~llg~------------ 270 (479)
+.|+.+|++.+...|....+|..||.+++..|+|++|+..|++++.+.. .....
T Consensus 23 ~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~ 102 (176)
T 2r5s_A 23 AQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELA 102 (176)
T ss_dssp HHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence 3444445444433456788999999999999999999999988754310 00111
Q ss_pred CChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 271 DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 271 d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
-+|.-..+|++||.+|...|++++|+.+|+++|.+
T Consensus 103 ~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 103 ANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 13344689999999999999999999999998865
No 193
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.93 E-value=8.8e-05 Score=60.32 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
+..++.+|..++.+|+|++|+.+|.+++++ .|....+|+++|.+|+.+
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~ 54 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERL 54 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHc
Confidence 457889999999999999999999999998 788889999999999875
No 194
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.93 E-value=2.5e-05 Score=62.13 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=40.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHH-HHHHHHHHHHhh
Q 011692 69 LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVN-AYYQYGRALLYK 121 (479)
Q Consensus 69 L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~-~y~~YG~ALl~~ 121 (479)
++.+|..++..|+|++|+.+|.+++++ +|.... +|+++|.+++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~lg~~~~~~ 48 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQT--------EPVGKDEAYYLMGNAYRKL 48 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHHc
Confidence 467899999999999999999999997 788888 999999999875
No 195
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.91 E-value=6.2e-05 Score=68.46 Aligned_cols=87 Identities=10% Similarity=-0.006 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHcC
Q 011692 214 KMLDVARAIAEKHWGDSMEKVDILSALAEVALERE---DIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEIG 289 (479)
Q Consensus 214 e~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g---~yeeAl~dy~kAL~I~~~llg~d~r-~iAea~~~LG~ay~~~ 289 (479)
+.+..++..|.+.....+...++.+++|..++..+ ++.++|..|+..++.- +| .-.+++|+||++|.+.
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-------~p~~~rd~lY~LAv~~~kl 84 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-------SKEEQRDYVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-------CccchHHHHHHHHHHHHHc
Confidence 34566666666554323356899999999999988 6778888887777642 23 3469999999999999
Q ss_pred CChhHHHHHHHHHHHHHH
Q 011692 290 SKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 290 g~~eeAi~~~ekAL~I~k 307 (479)
++|++|+.||+++|++-.
T Consensus 85 ~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp SCHHHHHHHHHHHHHHCT
T ss_pred cCHHHHHHHHHHHHhcCC
Confidence 999999999999998744
No 196
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.89 E-value=0.00031 Score=70.28 Aligned_cols=88 Identities=11% Similarity=0.088 Sum_probs=70.9
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 011692 206 ESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALER-----EDIETSLSDYQKALTILERMVEPDSRHIAELNF 280 (479)
Q Consensus 206 ~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~-----g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~ 280 (479)
...+..|..++++|+.|-. ...-..+|..||.+|... |+.++|..+|++||+|-.... ..++|
T Consensus 176 l~~l~~A~a~lerAleLDP-----~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~-------id~~v 243 (301)
T 3u64_A 176 PDTVHAAVMMLERACDLWP-----SYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD-------PDHHI 243 (301)
T ss_dssp HHHHHHHHHHHHHHHHHCT-----THHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC-------SHHHH
T ss_pred HHhHHHHHHHHHHHHHhCC-----CcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC-------chHHH
Confidence 3567777777887776632 223567999999999995 999999999999999965321 38899
Q ss_pred HHHHHHHcC-CChhHHHHHHHHHHHH
Q 011692 281 RICLCLEIG-SKPQEAIPYCQKAISV 305 (479)
Q Consensus 281 ~LG~ay~~~-g~~eeAi~~~ekAL~I 305 (479)
..|..|... +++++|..++++||.+
T Consensus 244 ~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 244 TYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 999999884 9999999999999863
No 197
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.82 E-value=0.00027 Score=83.41 Aligned_cols=87 Identities=7% Similarity=-0.094 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh-------c-----CC--------CChhHHHHHHHHHHHHHcCCCh
Q 011692 233 KVDILSALAEVALEREDIETSLSDYQKALTILERM-------V-----EP--------DSRHIAELNFRICLCLEIGSKP 292 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~l-------l-----g~--------d~r~iAea~~~LG~ay~~~g~~ 292 (479)
-.+.|..+|.++...|+|++|+.+|..|+++.+.. + +. ..+.. ..++++|.+|...|+|
T Consensus 1133 D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~-ad~~~iGd~le~eg~Y 1211 (1630)
T 1xi4_A 1133 DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNN-AHIQQVGDRCYDEKMY 1211 (1630)
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCH-HHHHHHHHHHHhcCCH
Confidence 36688889999999999999999998887554210 0 00 12222 3567899999999999
Q ss_pred hHHHHHHHHHHHHHH-----HHHHHHHHHHhhh
Q 011692 293 QEAIPYCQKAISVCK-----SRVQRLLNEVKSL 320 (479)
Q Consensus 293 eeAi~~~ekAL~I~k-----~rl~~l~~~l~~~ 320 (479)
++|+.+|++|-.-.+ -+++..+.+++..
T Consensus 1212 eeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaa 1244 (1630)
T 1xi4_A 1212 DAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGA 1244 (1630)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999843322 2334455555544
No 198
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.82 E-value=0.00013 Score=78.69 Aligned_cols=149 Identities=11% Similarity=0.061 Sum_probs=114.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcC
Q 011692 59 REKTVEFADELMEKGTNALKESDYG-EAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (479)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdye-eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~ 137 (479)
+.+.+..-..++.........++|. +|+++|.+++++ +|+...+|++-|.+|..+++...
T Consensus 21 ~~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~--------nP~~~taW~~R~~~l~~l~~~~~----------- 81 (567)
T 1dce_A 21 REQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKS----------- 81 (567)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHhcccccc-----------
Confidence 3444555566677777777788775 669999999999 89999999999999998732100
Q ss_pred CCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHH
Q 011692 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLD 217 (479)
Q Consensus 138 e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le 217 (479)
.+.....++.|++.++
T Consensus 82 ----------------------------------------------------------------~~~~~~~~~~eL~~~~ 97 (567)
T 1dce_A 82 ----------------------------------------------------------------PEESAALVKAELGFLE 97 (567)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------hhhhhhhHHHHHHHHH
Confidence 0011235666666666
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCC-ChhH
Q 011692 218 VARAIAEKHWGDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGS-KPQE 294 (479)
Q Consensus 218 ~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g--~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g-~~ee 294 (479)
.++.+ .++-..+|...+.+....+ +|++|+.+|.++|++..+.+ .+++..+.++...+ .+++
T Consensus 98 ~~l~~-------~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~--------~aW~~R~~~l~~l~~~~~~ 162 (567)
T 1dce_A 98 SCLRV-------NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF--------HCWDYRRFVAAQAAVAPAE 162 (567)
T ss_dssp HHHHH-------CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTCCCHHH
T ss_pred HHHHh-------CCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc--------cHHHHHHHHHHHcCCChHH
Confidence 66543 4567889999999999999 77999999999999865554 88999999999999 8999
Q ss_pred HHHHHHHHHHH
Q 011692 295 AIPYCQKAISV 305 (479)
Q Consensus 295 Ai~~~ekAL~I 305 (479)
+++++.++|++
T Consensus 163 el~~~~~~I~~ 173 (567)
T 1dce_A 163 ELAFTDSLITR 173 (567)
T ss_dssp HHHHHHTTTTT
T ss_pred HHHHHHHHHHH
Confidence 99998887654
No 199
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.73 E-value=0.00044 Score=69.16 Aligned_cols=135 Identities=8% Similarity=-0.056 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 66 ADELMEKGTNALKESDY-GEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdy-eeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
-..++..-...+..+.| ++|+.++.++|.+ +|+...+++.-|.+|..++.
T Consensus 32 y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~--------nP~~~taWn~R~~~L~~l~~--------------------- 82 (306)
T 3dra_A 32 YKQIMGLLLALMKAEEYSERALHITELGINE--------LASHYTIWIYRFNILKNLPN--------------------- 82 (306)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCTT---------------------
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CcHHHHHHHHHHHHHHHccc---------------------
Confidence 34666677777788888 5899999999999 89999999999999976510
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
.+++.++++++.++.+
T Consensus 83 --------------------------------------------------------------~~~~eeL~~~~~~L~~-- 98 (306)
T 3dra_A 83 --------------------------------------------------------------RNLYDELDWCEEIALD-- 98 (306)
T ss_dssp --------------------------------------------------------------SCHHHHHHHHHHHHHH--
T ss_pred --------------------------------------------------------------ccHHHHHHHHHHHHHH--
Confidence 1466677777766644
Q ss_pred HhcCCcchHHHHHHHHHHHH----Hhc---CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChh--HH
Q 011692 225 KHWGDSMEKVDILSALAEVA----LER---EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ--EA 295 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~----le~---g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~e--eA 295 (479)
.++...+++..+.+. ... +++++++..+.++|.+..+.+ .+++..+.++...++++ ++
T Consensus 99 -----nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny--------~aW~~R~~vl~~l~~~~~~~E 165 (306)
T 3dra_A 99 -----NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH--------HVWSYRKWLVDTFDLHNDAKE 165 (306)
T ss_dssp -----CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTTCTTCHHH
T ss_pred -----CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHHhcccChHHH
Confidence 234456777777777 555 799999999999999866654 88999999999999999 99
Q ss_pred HHHHHHHHHHH
Q 011692 296 IPYCQKAISVC 306 (479)
Q Consensus 296 i~~~ekAL~I~ 306 (479)
++++.++|++-
T Consensus 166 L~~~~~~i~~d 176 (306)
T 3dra_A 166 LSFVDKVIDTD 176 (306)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.64 E-value=0.00035 Score=57.80 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
++|..|..+|+.|+..+..........+++|..||.++..+|+|+.|+..|+++|.+. |+|+ .+++|++
T Consensus 19 ~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~-----P~~~---~~~~n~~ 87 (104)
T 2v5f_A 19 ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD-----PEHQ---RANGNLK 87 (104)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCH---HHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-----CCCH---HHHhhHH
Confidence 5788999999999988865532345688999999999999999999999999999874 3443 3456664
No 201
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.58 E-value=0.00024 Score=76.71 Aligned_cols=135 Identities=7% Similarity=-0.128 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKESD----------YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKK 135 (479)
Q Consensus 66 A~~L~~~G~~~~~~gd----------yeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~ 135 (479)
...+..+|..+...++ |++|+++|.+++++ +|.+..+|++-|.+|...+ .
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~--------~pK~y~aW~hR~w~l~~l~--------~---- 122 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------NPKSYGTWHHRCWLLSRLP--------E---- 122 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCS--------S----
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcc--------c----
Confidence 4567788888888888 99999999999998 8999999999999987641 0
Q ss_pred cCCCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHH
Q 011692 136 EGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKM 215 (479)
Q Consensus 136 ~~e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~ 215 (479)
.+++.|++.
T Consensus 123 -----------------------------------------------------------------------~~~~~el~~ 131 (567)
T 1dce_A 123 -----------------------------------------------------------------------PNWARELEL 131 (567)
T ss_dssp -----------------------------------------------------------------------CCHHHHHHH
T ss_pred -----------------------------------------------------------------------ccHHHHHHH
Confidence 245667777
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC-----
Q 011692 216 LDVARAIAEKHWGDSMEKVDILSALAEVALERE-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG----- 289 (479)
Q Consensus 216 Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g-~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~----- 289 (479)
++.+..+ .++-..+|+..|.+....+ .|++++.++.+++++... -..+++++|.++...
T Consensus 132 ~~k~l~~-------d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~--------n~saW~~r~~ll~~l~~~~~ 196 (567)
T 1dce_A 132 CARFLEA-------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS--------NYSSWHYRSCLLPQLHPQPD 196 (567)
T ss_dssp HHHHHHH-------CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC--------CHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHhh-------ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC--------CccHHHHHHHHHHhhccccc
Confidence 7777665 3445778999999999999 999999999998876322 248888999988774
Q ss_pred ---------CChhHHHHHHHHHHHHH
Q 011692 290 ---------SKPQEAIPYCQKAISVC 306 (479)
Q Consensus 290 ---------g~~eeAi~~~ekAL~I~ 306 (479)
+++++|+++|.+||.+.
T Consensus 197 ~~~~~~~~~~~~~eel~~~~~ai~~~ 222 (567)
T 1dce_A 197 SGPQGRLPENVLLKELELVQNAFFTD 222 (567)
T ss_dssp SSSCCSSCHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccHHHHHHHHHHHHHHHhhC
Confidence 45789999999999765
No 202
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.56 E-value=2.8e-05 Score=82.05 Aligned_cols=55 Identities=15% Similarity=0.056 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 235 DILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 235 ~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.+|..+|+.+.+.|+|++|+.+|.++ ..|.+|+.||.++|+|++|++.|++|..+
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp --------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 48999999999999999999999976 46889999999999999999999999544
No 203
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.52 E-value=0.0006 Score=62.81 Aligned_cols=95 Identities=12% Similarity=0.183 Sum_probs=72.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC------------
Q 011692 207 SDLDLAWKMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDS------------ 272 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~--~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~------------ 272 (479)
+-|+.|.-...+++.+.....+ .....++++..+|+.++..++|.+|+..|++||.+++.+.-..+
T Consensus 34 ~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p 113 (167)
T 3ffl_A 34 GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTP 113 (167)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----------------
T ss_pred hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCc
Confidence 4567777667777777655433 23457899999999999999999999999999999996542211
Q ss_pred -----hhHHHHHHHHHHHHHcCCChhHHHHHHHH
Q 011692 273 -----RHIAELNFRICLCLEIGSKPQEAIPYCQK 301 (479)
Q Consensus 273 -----r~iAea~~~LG~ay~~~g~~eeAi~~~ek 301 (479)
..-++.-|+|+.||...+++++||..++.
T Consensus 114 ~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 114 QSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 11247889999999999999999887643
No 204
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.42 E-value=0.002 Score=64.31 Aligned_cols=140 Identities=8% Similarity=-0.087 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCC
Q 011692 66 ADELMEKGTNALKES--DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGS 143 (479)
Q Consensus 66 A~~L~~~G~~~~~~g--dyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~ 143 (479)
......+|..+...+ +|++|+.++.+++.+ +|++..++++-|.+|.+.... ++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~--------nPk~y~aW~~R~~iL~~~~~~----l~~------------ 122 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALD--------NEKNYQIWNYRQLIIGQIMEL----NNN------------ 122 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH--------CTTCCHHHHHHHHHHHHHHHH----TTT------------
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--------CcccHHHHHHHHHHHHHHHHh----ccc------------
Confidence 445678999999999 999999999999998 899999999999999554211 000
Q ss_pred CCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHH
Q 011692 144 DKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIA 223 (479)
Q Consensus 144 ~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iy 223 (479)
..+++.++++++.++.+
T Consensus 123 --------------------------------------------------------------~~~~~~EL~~~~~~l~~- 139 (306)
T 3dra_A 123 --------------------------------------------------------------DFDPYREFDILEAMLSS- 139 (306)
T ss_dssp --------------------------------------------------------------CCCTHHHHHHHHHHHHH-
T ss_pred --------------------------------------------------------------cCCHHHHHHHHHHHHHh-
Confidence 02345566666666643
Q ss_pred HHhcCCcchHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC------hhHH
Q 011692 224 EKHWGDSMEKVDILSALAEVALEREDIE--TSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK------PQEA 295 (479)
Q Consensus 224 ek~~~~~~~~A~v~~~LGev~le~g~ye--eAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~------~eeA 295 (479)
.++-..+++..+-+....++|+ +++..+.++|++....+ .++++.+.++...++ ++++
T Consensus 140 ------~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~--------sAW~~R~~ll~~l~~~~~~~~~~eE 205 (306)
T 3dra_A 140 ------DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN--------SAWSHRFFLLFSKKHLATDNTIDEE 205 (306)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHSSGGGCCHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHhccccchhhhHHHH
Confidence 3455778999999999999999 99999999998755443 788999999999887 8999
Q ss_pred HHHHHHHHHHH
Q 011692 296 IPYCQKAISVC 306 (479)
Q Consensus 296 i~~~ekAL~I~ 306 (479)
++++.++|.+.
T Consensus 206 l~~~~~aI~~~ 216 (306)
T 3dra_A 206 LNYVKDKIVKC 216 (306)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999764
No 205
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.36 E-value=0.0027 Score=64.33 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 67 DELMEKGTNALKESDYG-EAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdye-eAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
..+...-......|+|. +|++++.+++.+ +|++..+++.-|.+|..+++.. + +
T Consensus 30 ~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~--------nP~~ytaWn~Rr~iL~~l~~~~----~--~------------ 83 (331)
T 3dss_A 30 QSATQAVFQKRQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEK----S--P------------ 83 (331)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHHHHHS----C--H------------
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHHhcccc----c--c------------
Confidence 34444455556788888 799999999998 8999999999999998874320 0 0
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
++....|+.++.+++.++.+
T Consensus 84 ---------------------------------------------------------~~~~~~l~~EL~~~~~~L~~--- 103 (331)
T 3dss_A 84 ---------------------------------------------------------EESAALVKAELGFLESCLRV--- 103 (331)
T ss_dssp ---------------------------------------------------------HHHHHHHHHHHHHHHHHHHH---
T ss_pred ---------------------------------------------------------hhhhHHHHHHHHHHHHHHHh---
Confidence 00113455666666655543
Q ss_pred hcCCcchHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC-hhHHHHHHHHH
Q 011692 226 HWGDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK-PQEAIPYCQKA 302 (479)
Q Consensus 226 ~~~~~~~~A~v~~~LGev~le~g--~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~-~eeAi~~~ekA 302 (479)
.++...+++..+.+....+ +|++++.++.++|.+..+.+ .+++..+.++...+. +++++.++.++
T Consensus 104 ----~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy--------~AW~~R~~vl~~l~~~~~eel~~~~~~ 171 (331)
T 3dss_A 104 ----NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF--------HCWDYRRFVAAQAAVAPAEELAFTDSL 171 (331)
T ss_dssp ----CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 4556778999999999988 49999999999999866554 789999999999998 59999999999
Q ss_pred HHH
Q 011692 303 ISV 305 (479)
Q Consensus 303 L~I 305 (479)
|.+
T Consensus 172 I~~ 174 (331)
T 3dss_A 172 ITR 174 (331)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 206
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.34 E-value=0.00032 Score=57.73 Aligned_cols=66 Identities=17% Similarity=-0.060 Sum_probs=56.9
Q ss_pred chHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 231 MEKVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 231 ~~~A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
+.-++++..+|.+++..++ .++|...|++||.+.... ..+++.||..+...|+|++|+.+|++.+.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~--------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN--------EAALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC--------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3457889999999986666 799999999999985443 48999999999999999999999998774
No 207
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.13 E-value=0.00093 Score=57.88 Aligned_cols=78 Identities=17% Similarity=0.054 Sum_probs=63.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
.|++.|+.+|++|... ++ ..++ ||.+|.....+++|+..|++|.+. . .+.++++||.+|
T Consensus 9 ~d~~~A~~~~~~aa~~-----g~----~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~-------g---~~~a~~~Lg~~y 67 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL-----NE----MFGC--LSLVSNSQINKQKLFQYLSKACEL-------N---SGNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHHT-----TC----TTHH--HHHHTCTTSCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcC-----CC----Hhhh--HHHHHHcCCCHHHHHHHHHHHHcC-------C---CHHHHHHHHHHH
Confidence 5788888888877532 11 1233 999999999999999999999876 2 268999999999
Q ss_pred Hc----CCChhHHHHHHHHHHHH
Q 011692 287 EI----GSKPQEAIPYCQKAISV 305 (479)
Q Consensus 287 ~~----~g~~eeAi~~~ekAL~I 305 (479)
.. ..++++|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCccHHHHHHHHHHHHcC
Confidence 98 88999999999999864
No 208
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.07 E-value=0.00081 Score=70.96 Aligned_cols=63 Identities=14% Similarity=0.112 Sum_probs=35.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC--CChhHHHHHHHHHHHHHH
Q 011692 237 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG--SKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 237 ~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~--g~~eeAi~~~ekAL~I~k 307 (479)
+..|...|...|+|++|+..|+++|.+-+.+ ...+..||.+|..- +++-++++.|...+.|-+
T Consensus 210 l~~lv~~Yek~G~~eEai~lLe~aL~le~ah--------~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 210 LEELINYYQDRGYFEELITMLEAALGLERAH--------MGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC--------HHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH--------HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 3345566666666666666666666554332 24555555555433 355566666666655544
No 209
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.06 E-value=0.0038 Score=51.17 Aligned_cols=48 Identities=15% Similarity=0.059 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 210 DLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 210 e~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
+.|..+|+.|+.+ .+....+++.||.+++..|+|++|+..|++.|...
T Consensus 26 ~~A~~~l~~AL~~-------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 26 DEVSLLLEQALQL-------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp HHHHHHHHHHHHH-------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHH-------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 3466667777654 45678899999999999999999999999988753
No 210
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.90 E-value=0.011 Score=51.90 Aligned_cols=103 Identities=11% Similarity=0.068 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHcC
Q 011692 211 LAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEIG 289 (479)
Q Consensus 211 ~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r-~iAea~~~LG~ay~~~ 289 (479)
..-+.|..++.-|.+......-..++.+++|..++...+-. +-++.+.|++.++..++| .-=+++|.||+.|.+.
T Consensus 12 ~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~----d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~ykl 87 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYND----DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRL 87 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHH----HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHh
Confidence 44566777888887664322245789999999999977644 556788888888876644 5669999999999999
Q ss_pred CChhHHHHHHHHHHHHHH--HHHHHHHHHH
Q 011692 290 SKPQEAIPYCQKAISVCK--SRVQRLLNEV 317 (479)
Q Consensus 290 g~~eeAi~~~ekAL~I~k--~rl~~l~~~l 317 (479)
|+|++|+.+++..|++-. .....|+..+
T Consensus 88 g~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 88 KEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999999998855 3333444433
No 211
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.79 E-value=0.011 Score=59.38 Aligned_cols=138 Identities=12% Similarity=0.002 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCcc
Q 011692 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDD 147 (479)
Q Consensus 68 ~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de 147 (479)
.++-+|..++..|+|++|+.+|.+.+.. |+ .+...+++.....+|+.+
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~-----~~-~~~~lea~~l~vqi~L~~-------------------------- 149 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDN-----DE-AEGTTELLLLAIEVALLN-------------------------- 149 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTS-----SC-STTHHHHHHHHHHHHHHT--------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CC-CcCcHHHHHHHHHHHHHC--------------------------
Confidence 4567889999999999999999888553 22 247778888888888875
Q ss_pred ccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhc
Q 011692 148 SVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHW 227 (479)
Q Consensus 148 ~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~ 227 (479)
+.+++|.++|+..+.+.....
T Consensus 150 -----------------------------------------------------------~r~d~A~k~l~~~~~~~~d~~ 170 (310)
T 3mv2_B 150 -----------------------------------------------------------NNVSTASTIFDNYTNAIEDTV 170 (310)
T ss_dssp -----------------------------------------------------------TCHHHHHHHHHHHHHHSCHHH
T ss_pred -----------------------------------------------------------CCHHHHHHHHHHHHhcCcccc
Confidence 345566666666554432000
Q ss_pred CCcchHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 228 GDSMEKVDILSALAEVALERE--DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 228 ~~~~~~A~v~~~LGev~le~g--~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
. .-.-.-++..-|.|.+..| +|.+|...|++.+.- ++ + ......+++ |+..+|+|++|...+++.+..
T Consensus 171 ~-~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~----~p-~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 171 S-GDNEMILNLAESYIKFATNKETATSNFYYYEELSQT----FP-T-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp H-HHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT----SC-S-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSH
T ss_pred c-cchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh----CC-C-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHh
Confidence 0 0022334444455566556 999999999885432 22 1 123345555 899999999999999876665
Q ss_pred H
Q 011692 306 C 306 (479)
Q Consensus 306 ~ 306 (479)
.
T Consensus 241 ~ 241 (310)
T 3mv2_B 241 Y 241 (310)
T ss_dssp H
T ss_pred c
Confidence 3
No 212
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.78 E-value=0.0059 Score=62.33 Aligned_cols=126 Identities=7% Similarity=-0.031 Sum_probs=97.3
Q ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccccc
Q 011692 74 TNALKE-SDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVKNA 152 (479)
Q Consensus 74 ~~~~~~-gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~~~ 152 (479)
+..+.. ...++|++++.+++.+ +|++..+++.-|.+|..++
T Consensus 61 r~~~~~~e~se~AL~lt~~~L~~--------nP~~ytaWn~R~~iL~~l~------------------------------ 102 (349)
T 3q7a_A 61 RAIAAKEEKSERALELTEIIVRM--------NPAHYTVWQYRFSLLTSLN------------------------------ 102 (349)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTT------------------------------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHh--------CchhHHHHHHHHHHHHHhh------------------------------
Confidence 334444 4457899999999999 8999999999999997651
Q ss_pred cCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCcch
Q 011692 153 VNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSME 232 (479)
Q Consensus 153 ~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~~~ 232 (479)
.+++.++++++.++.+ .++
T Consensus 103 ------------------------------------------------------~~l~eEL~~~~~~L~~-------nPK 121 (349)
T 3q7a_A 103 ------------------------------------------------------KSLEDELRLMNEFAVQ-------NLK 121 (349)
T ss_dssp ------------------------------------------------------CCHHHHHHHHHHHHHT-------TCC
T ss_pred ------------------------------------------------------hhHHHHHHHHHHHHHh-------CCC
Confidence 1355566666665532 356
Q ss_pred HHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChh--------HHHHHHHHH
Q 011692 233 KVDILSALAEVALER-E-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ--------EAIPYCQKA 302 (479)
Q Consensus 233 ~A~v~~~LGev~le~-g-~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~e--------eAi~~~ekA 302 (479)
...+++..+.+.... + ++++++..+.++|.+..+. -.+++..+.++...++++ ++++++.++
T Consensus 122 ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkN--------y~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~ 193 (349)
T 3q7a_A 122 SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKN--------YHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEM 193 (349)
T ss_dssp CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTC--------HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHhccccccchhhHHHHHHHHHHH
Confidence 678888899998888 7 8999999998888765444 378888899998888888 899999888
Q ss_pred HHHH
Q 011692 303 ISVC 306 (479)
Q Consensus 303 L~I~ 306 (479)
|++-
T Consensus 194 I~~d 197 (349)
T 3q7a_A 194 LRVD 197 (349)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8764
No 213
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.68 E-value=0.016 Score=59.16 Aligned_cols=136 Identities=8% Similarity=-0.122 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCC
Q 011692 66 ADELMEKGTNALKES-DYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSD 144 (479)
Q Consensus 66 A~~L~~~G~~~~~~g-dyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~ 144 (479)
......+|..+...+ +|++++.++.++|.+ +|++..++++-|.+|..+. +.
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~--------nPKny~aW~hR~wlL~~l~-------~~------------- 139 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ--------NLKSYQVWHHRLLLLDRIS-------PQ------------- 139 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT--------TCCCHHHHHHHHHHHHHHC-------CS-------------
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHhc-------CC-------------
Confidence 345678888888899 599999999999987 8999999999999998751 00
Q ss_pred CccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHH
Q 011692 145 KDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAE 224 (479)
Q Consensus 145 ~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iye 224 (479)
+++. ++.++.
T Consensus 140 ---------------------------------------------------------------~~~~-------EL~~~~ 149 (349)
T 3q7a_A 140 ---------------------------------------------------------------DPVS-------EIEYIH 149 (349)
T ss_dssp ---------------------------------------------------------------CCHH-------HHHHHH
T ss_pred ---------------------------------------------------------------ChHH-------HHHHHH
Confidence 0112 223334
Q ss_pred HhcCCcchHHHHHHHHHHHHHhcCCHH--------HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC-----
Q 011692 225 KHWGDSMEKVDILSALAEVALEREDIE--------TSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK----- 291 (479)
Q Consensus 225 k~~~~~~~~A~v~~~LGev~le~g~ye--------eAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~----- 291 (479)
+.+...++-..+++..+-+....++|+ +++.++.+++++....+ .++++.+.++...++
T Consensus 150 k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~--------SAW~~R~~lL~~l~~~~~~~ 221 (349)
T 3q7a_A 150 GSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN--------SAWGWRWYLRVSRPGAETSS 221 (349)
T ss_dssp HHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH--------HHHHHHHHHHTTSTTCCCCH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH--------HHHHHHHHHHHhccccccch
Confidence 444444556677777777777777777 89999999988755443 889999999999987
Q ss_pred --hhHHHHHHHHHHHHHH
Q 011692 292 --PQEAIPYCQKAISVCK 307 (479)
Q Consensus 292 --~eeAi~~~ekAL~I~k 307 (479)
+++++++++++|.+..
T Consensus 222 ~~~~eELe~~~~aI~~~P 239 (349)
T 3q7a_A 222 RSLQDELIYILKSIHLIP 239 (349)
T ss_dssp HHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 6899999999987653
No 214
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.57 E-value=0.019 Score=58.07 Aligned_cols=134 Identities=7% Similarity=-0.138 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcC
Q 011692 68 ELMEKGTNALKESD----------YGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEG 137 (479)
Q Consensus 68 ~L~~~G~~~~~~gd----------yeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~ 137 (479)
....+|..+...++ |.+++.++..++.+ +|.+..++++-|.+|..+++
T Consensus 66 aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~--------~PKny~aW~hR~wlL~~l~~-------------- 123 (331)
T 3dss_A 66 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------NPKSYGTWHHRCWLLSRLPE-------------- 123 (331)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHCSS--------------
T ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHhccCc--------------
Confidence 44555655555544 78899999999887 89999999999999976510
Q ss_pred CCCCCCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHH
Q 011692 138 DSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLD 217 (479)
Q Consensus 138 e~~~~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le 217 (479)
.+++.++++++
T Consensus 124 ---------------------------------------------------------------------~~~~~EL~~~~ 134 (331)
T 3dss_A 124 ---------------------------------------------------------------------PNWARELELCA 134 (331)
T ss_dssp ---------------------------------------------------------------------CCHHHHHHHHH
T ss_pred ---------------------------------------------------------------------ccHHHHHHHHH
Confidence 13555666666
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC-------
Q 011692 218 VARAIAEKHWGDSMEKVDILSALAEVALERED-IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG------- 289 (479)
Q Consensus 218 ~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~-yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~------- 289 (479)
.++.+ +++-..+++..+-|....++ +++++.++.+++.+.... ..++++++.++...
T Consensus 135 k~l~~-------dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N--------~SAW~~R~~ll~~l~~~~~~~ 199 (331)
T 3dss_A 135 RFLEA-------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN--------YSSWHYRSCLLPQLHPQPDSG 199 (331)
T ss_dssp HHHHH-------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC--------HHHHHHHHHHHHHHSCCC---
T ss_pred HHHHh-------CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHhhhccccc
Confidence 66543 34556788888999999998 699999999999764333 37788888888765
Q ss_pred -------CChhHHHHHHHHHHHHHH
Q 011692 290 -------SKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 290 -------g~~eeAi~~~ekAL~I~k 307 (479)
+.++++++++.++|.+..
T Consensus 200 ~~~~~~~~~~~eEle~~~~ai~~~P 224 (331)
T 3dss_A 200 PQGRLPENVLLKELELVQNAFFTDP 224 (331)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHST
T ss_pred cccccchHHHHHHHHHHHHHHHhCC
Confidence 457889999999887653
No 215
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.32 E-value=0.021 Score=51.71 Aligned_cols=55 Identities=18% Similarity=0.120 Sum_probs=43.7
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILER 266 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ 266 (479)
.+++.+..+|+.... .. ...+..+|+++||..|..+++|++|+.+++++|++.+.
T Consensus 49 ~~~~~gI~lLe~ll~---~~--~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~ 103 (152)
T 1pc2_A 49 DDIRKGIVLLEELLP---KG--SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ 103 (152)
T ss_dssp HHHHHHHHHHHHHHH---HS--CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHh---cC--CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 477788877776443 22 11257899999999999999999999999999999653
No 216
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.15 E-value=0.11 Score=47.69 Aligned_cols=107 Identities=7% Similarity=-0.047 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCCh-hHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCC
Q 011692 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELAL-ECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDK 145 (479)
Q Consensus 67 ~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~p-e~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~ 145 (479)
..|+.+.+.++..+.|+.|+-+++-++.+...--.-..| .-+.++++||.+||..
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~------------------------ 76 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHD------------------------ 76 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHT------------------------
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcc------------------------
Confidence 457889999999999999999999999985331111233 4568999999999975
Q ss_pred ccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHH
Q 011692 146 DDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK 225 (479)
Q Consensus 146 de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek 225 (479)
+.|-.|...|..|+.+...
T Consensus 77 -------------------------------------------------------------~eyrrA~~~y~qALq~~k~ 95 (167)
T 3ffl_A 77 -------------------------------------------------------------KEYRNAVSKYTMALQQKKA 95 (167)
T ss_dssp -------------------------------------------------------------TCHHHHHHHHHHHHHHHHC
T ss_pred -------------------------------------------------------------cHHHHHHHHHHHHHHHHHH
Confidence 4577888888888777653
Q ss_pred hcCC------------------cchHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 011692 226 HWGD------------------SMEKVDILSALAEVALEREDIETSLSDYQ 258 (479)
Q Consensus 226 ~~~~------------------~~~~A~v~~~LGev~le~g~yeeAl~dy~ 258 (479)
.... ...-+++.+.++.++++++++.+||..++
T Consensus 96 l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 96 LSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp C--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 2211 11235788999999999999999987754
No 217
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=95.61 E-value=0.29 Score=49.01 Aligned_cols=87 Identities=6% Similarity=-0.047 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC--ChhHHHHHHHHHHH
Q 011692 208 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD--SRHIAELNFRICLC 285 (479)
Q Consensus 208 dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d--~r~iAea~~~LG~a 285 (479)
+++.|+.+|+... .+ .+........+. +++.+|+|++|...+++.+++...+-..+ .+.-+.++.|+..+
T Consensus 193 ~~q~A~~~f~El~---~~----~p~~~~~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l 264 (310)
T 3mv2_B 193 TATSNFYYYEELS---QT----FPTWKTQLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITL 264 (310)
T ss_dssp TTTHHHHHHHHHH---TT----SCSHHHHHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH---Hh----CCCcccHHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHH
Confidence 3555676666532 22 222222233333 89999999999999998777754431111 12237889898888
Q ss_pred HHcCCChhHHHHHHHHHHH
Q 011692 286 LEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 286 y~~~g~~eeAi~~~ekAL~ 304 (479)
+..+|+ +|.++++++..
T Consensus 265 ~~~lgk--~a~~l~~qL~~ 281 (310)
T 3mv2_B 265 ALMQGL--DTEDLTNQLVK 281 (310)
T ss_dssp HHHTTC--TTHHHHHHHHH
T ss_pred HHHhCh--HHHHHHHHHHH
Confidence 888887 77777766554
No 218
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.55 E-value=0.11 Score=53.84 Aligned_cols=100 Identities=11% Similarity=0.001 Sum_probs=84.9
Q ss_pred CcChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 011692 205 DESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 284 (479)
Q Consensus 205 d~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 284 (479)
+.++|..|.+++...+.-+.+ .++...+.++|...-.+|..++|+.++...|.+|..+.-.++ .+.+..|.....-|+
T Consensus 111 ~~~~y~~a~~~i~~l~~~~~~-~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~-~~p~i~a~i~~~~Gi 188 (394)
T 3txn_A 111 DTALYTEALALGAQLLRELKK-LDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY-CPPKVQGALDLQSGI 188 (394)
T ss_dssp HTTCHHHHHHHHHHHHHHHTT-SSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC-CCHHHHHHHHHHhhH
Confidence 347889998888777766554 344677899999999999999999999999999999998775 455668999999999
Q ss_pred HHH-cCCChhHHHHHHHHHHHHH
Q 011692 285 CLE-IGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 285 ay~-~~g~~eeAi~~~ekAL~I~ 306 (479)
.|. ..++|..|..+|-.|..-+
T Consensus 189 ~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 189 LHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHhcc
Confidence 999 9999999999999887554
No 219
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.8 Score=47.69 Aligned_cols=117 Identities=16% Similarity=0.077 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCC-hhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCC
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELA-LECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQ 141 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~-pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~ 141 (479)
.++|.--..++..+...|+|.+|++++++. +.+.||.+. .+..++|+.--+.++..
T Consensus 134 ~erarl~~~La~i~e~~g~~~eA~~iL~~l---~~Et~~~~~~~~kve~~l~q~rl~l~~-------------------- 190 (445)
T 4b4t_P 134 VERARVTKDLVEIKKEEGKIDEAADILCEL---QVETYGSMEMSEKIQFILEQMELSILK-------------------- 190 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHH---HHHHCSSSCHHHHHHHHHHHHHHHHHH--------------------
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHH---HHHHHhcccHHHHHHHHHHHHHHHHHC--------------------
Confidence 356766778899999999999999998765 577888754 46667777766666654
Q ss_pred CCCCccccccccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHH
Q 011692 142 GSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARA 221 (479)
Q Consensus 142 ~~~~de~~~~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~ 221 (479)
+|+..|...+..++.
T Consensus 191 -----------------------------------------------------------------~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 191 -----------------------------------------------------------------GDYSQATVLSRKILK 205 (445)
T ss_dssp -----------------------------------------------------------------TCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------CCHHHHHHHHHHHHH
Confidence 467778777888775
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 011692 222 IAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERM 267 (479)
Q Consensus 222 Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~l 267 (479)
.+........-.+..|..+|.++...++|.+|..+|..++......
T Consensus 206 ~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~ 251 (445)
T 4b4t_P 206 KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIK 251 (445)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccccc
Confidence 4444433334568899999999999999999999999999876554
No 220
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.27 E-value=0.067 Score=47.42 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChh
Q 011692 214 KMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQ 293 (479)
Q Consensus 214 e~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~e 293 (479)
+-|.+.+..|.+..... -..++-+++|...+...+- .+.++++.|++.++..+....=+++|.|++.|.++|+|+
T Consensus 21 eeL~~l~~qy~~E~~~~-vs~qt~F~yAw~Lv~S~~~----~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~ 95 (134)
T 3o48_A 21 QQLEILRQQVVSEGGPT-ATIQSRFNYAWGLIKSTDV----NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYS 95 (134)
T ss_dssp HHHHHHHHHHHHTTGGG-SCHHHHHHHHHHHHHSSCH----HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCC-CChhhHHHHHHHHHcCCCH----HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHH
Confidence 45678888888764212 2468999999999888764 355667777776664333245699999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISV 305 (479)
Q Consensus 294 eAi~~~ekAL~I 305 (479)
+|+.+.+..|++
T Consensus 96 ~Ar~y~d~lL~~ 107 (134)
T 3o48_A 96 MAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999888865
No 221
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.02 E-value=0.13 Score=46.09 Aligned_cols=86 Identities=13% Similarity=0.086 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH
Q 011692 215 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 294 (479)
Q Consensus 215 ~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee 294 (479)
-|...+..|.+.... .-..++.++++...+...+-. +-++.+.|++.++..+...-=+++|.|++.|.++++|++
T Consensus 21 eL~~lr~qY~~E~~~-~vs~~t~F~YAw~Lv~S~~~~----di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~ 95 (144)
T 1y8m_A 21 QLEILRQQVVSEGGP-TATIQSRFNYAWGLIKSTDVN----DERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSM 95 (144)
T ss_dssp HHHHHHHHHHHTTST-TSCHHHHHHHHHHHHHSSSHH----HHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHhccC-CCcHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHH
Confidence 466778888776332 345789999999999887754 445666666666532221234899999999999999999
Q ss_pred HHHHHHHHHHH
Q 011692 295 AIPYCQKAISV 305 (479)
Q Consensus 295 Ai~~~ekAL~I 305 (479)
|+.|++..|++
T Consensus 96 Ar~y~d~lL~~ 106 (144)
T 1y8m_A 96 AKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999988865
No 222
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.84 E-value=0.15 Score=50.88 Aligned_cols=64 Identities=11% Similarity=0.033 Sum_probs=48.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcch-HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSME-KVDILSALAEVALER-EDIETSLSDYQKALTILERMVEPDSRHIAELN 279 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~-~A~v~~~LGev~le~-g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~ 279 (479)
++.+.|.++|++|+.|- +. .++++...|+.++.. ++++.|...++++|.+-....+ ++.+++..
T Consensus 218 Gd~ekA~~~ferAL~Ln-------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P--~~~lan~~ 283 (301)
T 3u64_A 218 GGMEKAHTAFEHLTRYC-------SAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVP--HNKLLVIL 283 (301)
T ss_dssp CCHHHHHHHHHHHHHHC-------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCS--SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCC--ChhHHHHH
Confidence 56788888999998873 33 378999999999995 9999999999999987554322 24455443
No 223
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.35 E-value=0.44 Score=48.58 Aligned_cols=69 Identities=9% Similarity=0.053 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Q 011692 234 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 310 (479)
Q Consensus 234 A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl 310 (479)
..+...+++.++..|+|.+|+..+.+.+.+..- + =..|..|-.+|...|+..+|+.+|++.-..+...|
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~-----~---E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eL 239 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPY-----R---EPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDL 239 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----C---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-----C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHh
Confidence 456677889999999999999999988766321 1 25788899999999999999999999888776543
No 224
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.13 E-value=0.56 Score=51.68 Aligned_cols=94 Identities=4% Similarity=-0.077 Sum_probs=62.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhc-------CC--------cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Q 011692 207 SDLDLAWKMLDVARAIAEKHW-------GD--------SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD 271 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~-------~~--------~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d 271 (479)
++++.|.++|+.++..+.+.. .. +.....+|...+....+.++.+.|...|.+|++.. +..
T Consensus 392 ~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~----~~~ 467 (679)
T 4e6h_A 392 TKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLK----KLV 467 (679)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTG----GGS
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc----CCC
Confidence 567788888888877642111 00 01245678888888888899999999999997752 111
Q ss_pred ChhHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHH
Q 011692 272 SRHIAELNFRICLCLEIGS-KPQEAIPYCQKAISVCK 307 (479)
Q Consensus 272 ~r~iAea~~~LG~ay~~~g-~~eeAi~~~ekAL~I~k 307 (479)
. ..+|...+......+ +++.|...|+++|..+.
T Consensus 468 ~---~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p 501 (679)
T 4e6h_A 468 T---PDIYLENAYIEYHISKDTKTACKVLELGLKYFA 501 (679)
T ss_dssp C---THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT
T ss_pred C---hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC
Confidence 1 133445555544444 58999999999998765
No 225
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=93.94 E-value=0.47 Score=52.31 Aligned_cols=85 Identities=12% Similarity=0.092 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 011692 209 LDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALERED-IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLE 287 (479)
Q Consensus 209 le~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~-yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~ 287 (479)
++.|..+|+.|+... ......+|...+.+-...++ ++.|...|+++|+... +++.+-. ..+..+.
T Consensus 450 l~~AR~vf~~A~~~~------~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p-----~~~~~w~---~y~~fe~ 515 (679)
T 4e6h_A 450 LAASRKIFGKCRRLK------KLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFA-----TDGEYIN---KYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHHTG------GGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHT-----TCHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHhc------CCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCC-----CchHHHH---HHHHHHH
Confidence 445555555555321 11124566677777766654 8999999999998743 3333333 3333445
Q ss_pred cCCChhHHHHHHHHHHHHHH
Q 011692 288 IGSKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 288 ~~g~~eeAi~~~ekAL~I~k 307 (479)
..++.+.|...|++|+..+.
T Consensus 516 ~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 516 YVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHTCHHHHHHHHHHHTTTSS
T ss_pred hCCCHHHHHHHHHHHHHhcC
Confidence 56889999999999886543
No 226
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.42 E-value=3 Score=42.99 Aligned_cols=131 Identities=15% Similarity=0.028 Sum_probs=89.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcCCCCCCCcCCCCCCCCCccccc
Q 011692 71 EKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPLVSVPKKEGDSQQGSDKDDSVK 150 (479)
Q Consensus 71 ~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvLG~~~~~~~e~~~~~~~de~~~ 150 (479)
.+|..++..|+|.+|..++.+.+.-.... ++..-+-++|..--+.++.+
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~--dd~~~llev~lle~~~~~~~----------------------------- 152 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKL--DDKNLLVEVQLLESKTYHAL----------------------------- 152 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTS--SCTHHHHHHHHHHHHHHHHT-----------------------------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHHHh-----------------------------
Confidence 78999999999999999999888865432 22333444444444444432
Q ss_pred cccCCCCCcccCCCchhhcCCCCCcCccccCCCCCCCCCcccCCCCccccccccCcChHHHHHHHHHHHHHHHHHhcCCc
Q 011692 151 NAVNGESSTASVSSSAEQHGSSNNQDEAADDAVPGDNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDS 230 (479)
Q Consensus 151 ~~~~~e~a~~~~s~~~e~~~~~n~~d~~~~~~~~~ee~e~~e~~~~E~~~~~~ed~~dle~Awe~Le~Ar~Iyek~~~~~ 230 (479)
+++..+...|..|+.+-.....+.
T Consensus 153 --------------------------------------------------------~n~~k~k~~l~~a~~~~~ai~~~p 176 (394)
T 3txn_A 153 --------------------------------------------------------SNLPKARAALTSARTTANAIYCPP 176 (394)
T ss_dssp --------------------------------------------------------TCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred --------------------------------------------------------ccHHHHHHHHHHHHhhhccCCCCH
Confidence 467778888899988876543333
Q ss_pred chHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC
Q 011692 231 MEKVDILSALAEVAL-EREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 291 (479)
Q Consensus 231 ~~~A~v~~~LGev~l-e~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~ 291 (479)
.-.+.+...-|.+++ ..++|..|..+|-+|+.-+. ...++.--.++..+++|-...+.
T Consensus 177 ~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~---~~~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 177 KVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFD---SVDSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccc---ccccHHHHHHHHHHHHHHHHcCC
Confidence 346888888899999 99999999999999974433 22344333444446666665554
No 227
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.10 E-value=0.29 Score=52.47 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=58.7
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC---ChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 231 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD---SRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 231 ~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d---~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
...+.+++.|=..|+..+.|++|.....++. ++.. ..+.+.=+|.+|.++..+++|.+|..|+..|+.
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~------fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~r 298 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLE------YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIR 298 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC------SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCc------CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4578999999999999999999998888773 5533 456788889999999999999999999999875
No 228
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.00 E-value=0.17 Score=53.92 Aligned_cols=64 Identities=17% Similarity=0.200 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 234 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 234 A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
-.|+..||+++.-...+..|..+|.+|+.+.... ...|++||+.+...+++=+|+-||-++|.+
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~--------G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN--------GQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB--------SHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC--------CchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 3488899999999999999999999999996554 589999999999999999999999999874
No 229
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.42 E-value=0.71 Score=47.70 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=74.8
Q ss_pred cCcChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 011692 204 EDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRIC 283 (479)
Q Consensus 204 ed~~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG 283 (479)
.+.||++.|.+.|..++.-. .. ....++++..+-.+++..++|..+...+.++..+... +.+....+.....-|
T Consensus 142 ~~~Gd~~~A~~~~~~~~~~~-~~---~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~--~~d~~~~~~lk~~~g 215 (429)
T 4b4t_R 142 AQIGDKDNAEKTLGKSLSKA-IS---TGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK--GGDWERRNRYKTYYG 215 (429)
T ss_dssp HHHCCCTTHHHHHHHHHHHH-TC---CCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT--CCCTHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhc-CC---hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc--CCCHHHHHHHHHHHH
Confidence 35677788888887766532 11 2357899999999999999999999999999887654 345555677778889
Q ss_pred HHHHcCCChhHHHHHHHHHHH
Q 011692 284 LCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 284 ~ay~~~g~~eeAi~~~ekAL~ 304 (479)
+.+...++|..|..+|-.++.
T Consensus 216 l~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 216 IHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHhChHHHHHHHHHHHhc
Confidence 999999999999999977544
No 230
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=91.26 E-value=0.4 Score=43.60 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=68.3
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Q 011692 231 MEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 310 (479)
Q Consensus 231 ~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl 310 (479)
...+..+...+.. .+.++.++|...|+.|+.+ |...|-+|...+.--.++|+...|...+.+||.++..-.
T Consensus 58 rrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~--------hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~ 128 (161)
T 4h7y_A 58 ESFARIQVRFAEL-KAIQEPDDARDYFQMARAN--------CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL 128 (161)
T ss_dssp HHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH--------CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH
T ss_pred HHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH
Confidence 4568888888855 7889999999999999997 333377777777777789999999999999999988777
Q ss_pred HHHHHHHhhhcc
Q 011692 311 QRLLNEVKSLGE 322 (479)
Q Consensus 311 ~~l~~~l~~~~~ 322 (479)
+.|+-.|..+..
T Consensus 129 ~~le~a~~nl~~ 140 (161)
T 4h7y_A 129 EMLEIALRNLNL 140 (161)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhhc
Confidence 778777777754
No 231
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=91.05 E-value=1.1 Score=38.60 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CC-CChhHHHHHHHHHHHHHhh
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GE-LALECVNAYYQYGRALLYK 121 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge-~~pe~A~~y~~YG~ALl~~ 121 (479)
..+..|..|+.++..+-..++|++|+.+|.+|++++.... .+ ..+..-..|-..-.-|+..
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~R 75 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDR 75 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 3577899999999999999999999999999999887654 44 5666555444444444443
No 232
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=90.78 E-value=0.98 Score=44.21 Aligned_cols=73 Identities=23% Similarity=0.206 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALEREDI---ETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~y---eeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
.++.|.-|+++.....+. +.|...|++|+.|.+..++|.||. +..+++.=-+-|+.+++.++|+..-++|..-
T Consensus 131 KGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 131 KGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 467777888875443333 588999999999999889999987 4333333334455689999998887777643
No 233
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=90.36 E-value=1.8 Score=37.78 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=47.4
Q ss_pred ChHHHHHHHH--------HHHHHHHHHhcCCc-c-hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011692 207 SDLDLAWKML--------DVARAIAEKHWGDS-M-EKVDILSALAEVALEREDIETSLSDYQKALTILE 265 (479)
Q Consensus 207 ~dle~Awe~L--------e~Ar~Iyek~~~~~-~-~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~ 265 (479)
-.|..||.+. ..+..+++...... + ..-+|++.||.-+..+|+|++|+.+++.+|++.+
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC
Confidence 5799999653 44666666655543 3 6789999999999999999999999999999853
No 234
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=89.97 E-value=0.44 Score=48.94 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=56.6
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCCh
Q 011692 217 DVARAIAEKHWGDSMEKVDILSALAEVALEREDI----ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 292 (479)
Q Consensus 217 e~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~y----eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ 292 (479)
..|+.+|++.....|..+.+|..|+.+|+....+ ...+..+..++.-...+ ...+..+.+|.-+++++.+.|++
T Consensus 216 ~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~--~~~~~~a~~~~alal~~l~~gd~ 293 (372)
T 3ly7_A 216 NRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTL--PELNNLSIIYQIKAVSALVKGKT 293 (372)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTC--GGGTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhc--ccCCcCHHHHHHHHHHHHhCCCH
Confidence 4556666665544566777777777766532111 22334444455422221 23355577888999999999999
Q ss_pred hHHHHHHHHHHHHH
Q 011692 293 QEAIPYCQKAISVC 306 (479)
Q Consensus 293 eeAi~~~ekAL~I~ 306 (479)
++|+.++++||.+-
T Consensus 294 d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 294 DESYQAINTGIDLE 307 (372)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999873
No 235
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=89.85 E-value=1.6 Score=41.81 Aligned_cols=72 Identities=15% Similarity=0.026 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
.++.|.-|+++. .|+-+.|...|+.|+.|....++|.||. +..+++.==+-|+.+++.++|+..-++|+.+.
T Consensus 126 KGDYyRYlAE~~--~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 126 KSDISRYKLEFG--LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHc--cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 467777888864 4559999999999999999989999986 54444444445668999999999999998853
No 236
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=89.85 E-value=1.2 Score=43.00 Aligned_cols=72 Identities=29% Similarity=0.420 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH-HHHcCCChhHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRICL-CLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~-ay~~~g~~eeAi~~~ekAL~ 304 (479)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+. -|+.+++.++|+..-++|..
T Consensus 129 KGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 129 KGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46777777777644433 36788999999999999999999874334444443 45578899988887777654
No 237
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.49 E-value=0.53 Score=48.69 Aligned_cols=87 Identities=11% Similarity=-0.009 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH
Q 011692 215 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 294 (479)
Q Consensus 215 ~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee 294 (479)
-|+..+..+++.........+++..||..|++.|+|+.|+..|.+.+... .+. .+..+.++.+-.++.+.+++..
T Consensus 112 ~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~---~~~--~~kid~~l~~irl~l~~~d~~~ 186 (429)
T 4b4t_R 112 ELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKA---IST--GAKIDVMLTIARLGFFYNDQLY 186 (429)
T ss_dssp HHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHH---TCC--CSHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc---CCh--HHHHHHHHHHHHHHHHhccHHH
Confidence 34444444544222234567899999999999999999999999876543 333 3456888888888888999999
Q ss_pred HHHHHHHHHHHH
Q 011692 295 AIPYCQKAISVC 306 (479)
Q Consensus 295 Ai~~~ekAL~I~ 306 (479)
+..++.++..++
T Consensus 187 ~~~~~~ka~~~~ 198 (429)
T 4b4t_R 187 VKEKLEAVNSMI 198 (429)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998775
No 238
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=89.22 E-value=2.1 Score=34.35 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhh
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
..+..|..|+.+|...-..|+|++|+.+|.+|++++.... .+..|..-..+-.--.-|+..
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~R 69 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNR 69 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3577899999999999999999999999999999876643 345566555554444444443
No 239
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=89.22 E-value=1.7 Score=35.02 Aligned_cols=52 Identities=19% Similarity=0.101 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHH
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYY 112 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge~~pe~A~~y~ 112 (479)
..+..|..|+.+|..+-..|+|.+|+.+|.+|++.+.... .+..+..-+.|-
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir 66 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYE 66 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 4677899999999999999999999999999999877642 234455544443
No 240
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.01 E-value=1.4 Score=45.91 Aligned_cols=100 Identities=14% Similarity=0.005 Sum_probs=75.4
Q ss_pred cCcChHHHHHHHHHH-HHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 011692 204 EDESDLDLAWKMLDV-ARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRI 282 (479)
Q Consensus 204 ed~~dle~Awe~Le~-Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~L 282 (479)
++.+++..|..+|.. -+..|. ..+....+++|.....+|++.++|.+|...+.++........ +.....+..|...
T Consensus 148 e~~g~~~eA~~iL~~l~~Et~~--~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~-~~~~lk~~~~~~~ 224 (445)
T 4b4t_P 148 KEEGKIDEAADILCELQVETYG--SMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNP-KYESLKLEYYNLL 224 (445)
T ss_dssp HHHTCHHHHHHHHHHHHHHHCS--SSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSS-CCHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccC-CcHHHHHHHHHHH
Confidence 455788888777643 333332 123456899999999999999999999999999864433332 2334567888889
Q ss_pred HHHHHcCCChhHHHHHHHHHHHHH
Q 011692 283 CLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 283 G~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
|..|...++|.+|..+|..+...+
T Consensus 225 ~~~~~~e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 225 VKISLHKREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHhcc
Confidence 999999999999999999988765
No 241
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=88.83 E-value=2.6 Score=34.59 Aligned_cols=59 Identities=12% Similarity=0.160 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHH
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALL 119 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge~~pe~A~~y~~YG~ALl 119 (479)
..+..|..|+.+|..+-..|+|.+|+.+|.+|++.+.... .+..+..-..+-.-=.-|+
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl 69 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYM 69 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3466799999999999999999999999999999887754 4556665554444333333
No 242
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=88.72 E-value=1.9 Score=34.62 Aligned_cols=60 Identities=17% Similarity=0.068 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhh
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
.+..|..|+.+|..+-..|+|.+|+.+|.+|++.+.... .+..+..-+.|-.-=.-|+..
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~R 67 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKR 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999877642 334555555444333333433
No 243
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=88.31 E-value=1.8 Score=41.65 Aligned_cols=72 Identities=25% Similarity=0.201 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChh-HHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRH-IAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~llg~d~r~-iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
.++.|.-|+++.....+ -+.|...|++|+.|.+..++|.||. +..+++.=-+-|+..++.++|+..-++|+.
T Consensus 126 KGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 126 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46777788887544333 3688999999999999999999986 433333333445568999988887777654
No 244
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.73 E-value=3.1 Score=33.71 Aligned_cols=57 Identities=12% Similarity=0.164 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHh
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLY 120 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge~~pe~A~~y~~YG~ALl~ 120 (479)
..|..|+.++..+-..|+|.+|+.+|.+|++++.... .+..|..-..+-.--.-|+.
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~ 71 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMD 71 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999877664 56677665555443333333
No 245
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=87.03 E-value=1.7 Score=42.19 Aligned_cols=72 Identities=26% Similarity=0.326 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHcCCChhHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~g~~eeAi~~~ekAL~ 304 (479)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+ +-|+.+++.++|+..-++|+.
T Consensus 127 KGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 127 KGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45666667766543322 3688999999999999999999987333333443 445568899988887777654
No 246
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=86.95 E-value=3.1 Score=42.48 Aligned_cols=58 Identities=14% Similarity=0.105 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHH--HhcCCCC---------hhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Q 011692 253 SLSDYQKALTILE--RMVEPDS---------RHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 310 (479)
Q Consensus 253 Al~dy~kAL~I~~--~llg~d~---------r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl 310 (479)
+..+|+.|++... ..++..+ ...|.+||..|..+...++|.+||.+++.|...++...
T Consensus 241 ~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 309 (380)
T 3c3r_A 241 AADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVA 309 (380)
T ss_dssp HHHHHHHHHHHHTTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 3456666666655 2223332 23578899999999999999999999999998765543
No 247
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=86.81 E-value=3.2 Score=34.35 Aligned_cols=52 Identities=21% Similarity=0.291 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHH-HHHHHHHHhh
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAY-YQYGRALLYK 121 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y-~~YG~ALl~~ 121 (479)
..|..|+..|+.+|..++|.+|.-+|.++..+ ..+|++-.++ |++|.|--.+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~------ten~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL------SDNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc------ccCHHHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999876 4589999999 8888886554
No 248
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=86.35 E-value=6.6 Score=43.87 Aligned_cols=59 Identities=17% Similarity=0.165 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHH
Q 011692 233 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 299 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ 299 (479)
.+..+...++..+..++|+-|+..-++|..+...-| .++|+|+.||..+++|+.|+-.+
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF--------~tW~~La~vYi~l~d~e~ALLtL 394 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSF--------ESWYNLARCHIKKEEYEKALFAI 394 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH--------HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhh--------HHHHHHHHHHHHhccHHHHHHHH
Confidence 355777889999999999999999999999987776 89999999999999999998543
No 249
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=86.06 E-value=7.7 Score=32.17 Aligned_cols=40 Identities=23% Similarity=0.179 Sum_probs=34.8
Q ss_pred cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Q 011692 230 SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVE 269 (479)
Q Consensus 230 ~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg 269 (479)
++..|-.|...++-++..|+|++||+++++|..++...+.
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmk 50 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMK 50 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999999999999999999988776654
No 250
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=85.46 E-value=7.6 Score=39.51 Aligned_cols=39 Identities=21% Similarity=-0.082 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Q 011692 274 HIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQR 312 (479)
Q Consensus 274 ~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~~ 312 (479)
..|.+||..|+.+...++|.+||.+++.|...++.-...
T Consensus 251 ~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a~~~ 289 (376)
T 3r9m_A 251 YTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEAL 289 (376)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999999988765444
No 251
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=85.24 E-value=3.5 Score=45.51 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHH--HhcCCCC---------hhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 011692 253 SLSDYQKALTILE--RMVEPDS---------RHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 253 Al~dy~kAL~I~~--~llg~d~---------r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
+..+|..|+.... ..++..+ ...|.+||..|..+...++|.+||.+++.|...++.
T Consensus 226 ~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 292 (704)
T 2xs1_A 226 AADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIARLQHAAELIKT 292 (704)
T ss_dssp HHHHHHHHHHHHHTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Confidence 3456677766655 2233332 335788999999999999999999999999987754
No 252
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=84.97 E-value=1.9 Score=39.83 Aligned_cols=54 Identities=24% Similarity=0.180 Sum_probs=38.1
Q ss_pred ChHHHHHHH--HHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011692 207 SDLDLAWKM--LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE 265 (479)
Q Consensus 207 ~dle~Awe~--Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~ 265 (479)
-.|++|++. |+.|+.|.+.. +.-..|..||+..+..|+++-|..+|+++=.+-.
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~ 65 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDK 65 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHH
Confidence 355555543 45555554433 2356899999999999999999999998754433
No 253
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=84.92 E-value=2.9 Score=40.83 Aligned_cols=71 Identities=23% Similarity=0.314 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHcCCChhHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~g~~eeAi~~~ekAL~ 304 (479)
.++.|.-|+++.....+ -+.|...|++|+.|. ..++|.||.---...|.+ +-|+.+++.++|+..-++|..
T Consensus 152 KGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 152 KGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46777788887544333 368899999999999 889999987333333333 444568999988887777654
No 254
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=84.83 E-value=1.9 Score=35.73 Aligned_cols=41 Identities=17% Similarity=0.277 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhC
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYG 101 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~G 101 (479)
.-+..|..+--++.+++..|+|++|++|+.+|+..+.+-+-
T Consensus 10 spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmk 50 (97)
T 2crb_A 10 GPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMK 50 (97)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 34667889999999999999999999999999998776543
No 255
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=84.82 E-value=17 Score=38.07 Aligned_cols=84 Identities=11% Similarity=0.063 Sum_probs=59.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|+++|+..+. .+..+ -..+|+.|=..|+..|++++|...|++-++ .-+.|+ ..+|..|=.+|
T Consensus 119 g~~~~A~~l~~~M~~-----~g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~---~G~~Pd----~~ty~~Li~~~ 185 (501)
T 4g26_A 119 DDPEMAFDMVKQMKA-----FGIQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVE---SEVVPE----EPELAALLKVS 185 (501)
T ss_dssp TCHHHHHHHHHHHHH-----TTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-----cCCCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHh---cCCCCC----HHHHHHHHHHH
Confidence 455556555544321 12222 256899999999999999999999887543 333333 36788888999
Q ss_pred HcCCChhHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL 303 (479)
...|++++|...|++-.
T Consensus 186 ~~~g~~d~A~~ll~~Mr 202 (501)
T 4g26_A 186 MDTKNADKVYKTLQRLR 202 (501)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHH
Confidence 99999999999998743
No 256
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=84.02 E-value=3.5 Score=36.35 Aligned_cols=58 Identities=10% Similarity=0.153 Sum_probs=44.5
Q ss_pred ChHHHHHHHH--------HHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 207 SDLDLAWKML--------DVARAIAEKHWGDS-MEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 207 ~dle~Awe~L--------e~Ar~Iyek~~~~~-~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
..|..||.+. ..+..+++...... ...-+|+..||.-+..+|+|+.|+.+.+.+|++.
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Confidence 5788999764 34555554443322 3578999999999999999999999999988874
No 257
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=83.83 E-value=5.4 Score=40.76 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHhcC-------C---------CChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHH
Q 011692 252 TSLSDYQKALTILERMVE-------P---------DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSR 309 (479)
Q Consensus 252 eAl~dy~kAL~I~~~llg-------~---------d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~r 309 (479)
++..+|+.|+........ . .+...|.+||..|..+...++|.+||.+++.|...++..
T Consensus 217 ~~~~~Y~~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 290 (392)
T 1zb1_A 217 ATCNLFQKCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISS 290 (392)
T ss_dssp HHHHHHHHHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 455667777776665421 1 123467889999999999999999999999998765443
No 258
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=83.51 E-value=3.1 Score=40.63 Aligned_cols=72 Identities=26% Similarity=0.268 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHH-HHHHcCCChhHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALERED---IETSLSDYQKALTILERMVEPDSRHIAELNFRIC-LCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG-~ay~~~g~~eeAi~~~ekAL~ 304 (479)
.++.|.-|+++.....+ -+.|...|++|+.|....++|.||.---...|.+ +-|+.+++.++|+..-++|..
T Consensus 152 KGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 152 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46677777776544333 3678999999999999999999987433334444 345568899988887777654
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=83.29 E-value=6.6 Score=35.02 Aligned_cols=59 Identities=10% Similarity=0.155 Sum_probs=44.7
Q ss_pred cChHHHHHHHH--------HHHHHHHHHhcCC-cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 206 ESDLDLAWKML--------DVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 206 ~~dle~Awe~L--------e~Ar~Iyek~~~~-~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
...|+.||.+. ..+..+++..... ....=+|+..||.-+..+++|++|..+.+.+|++.
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~e 107 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 107 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 35899999764 3444455444322 23578899999999999999999999999998874
No 260
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.80 E-value=2.8 Score=44.97 Aligned_cols=82 Identities=18% Similarity=0.177 Sum_probs=48.8
Q ss_pred hHHHHHH--HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-----HhcCCCChhHHHHHH
Q 011692 208 DLDLAWK--MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILE-----RMVEPDSRHIAELNF 280 (479)
Q Consensus 208 dle~Awe--~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~-----~llg~d~r~iAea~~ 280 (479)
.|++|+. .|+.|+.+.... ..-..|..||+.++..++|+.|+..|.++-.... ...+ . .+-+-
T Consensus 658 ~f~~~l~~~~~~~A~~~~~~~-----~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~--~---~~~~~ 727 (814)
T 3mkq_A 658 KFELALKVGQLTLARDLLTDE-----SAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFN--N---KEGLV 727 (814)
T ss_dssp HHHHHHHHTCHHHHHHHHTTC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT--C---HHHHH
T ss_pred heehhhhcCCHHHHHHHHHhh-----CcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcC--C---HHHHH
Confidence 3444444 356666665433 2246899999999999999999999999733322 2221 1 12233
Q ss_pred HHHHHHHcCCChhHHHHHH
Q 011692 281 RICLCLEIGSKPQEAIPYC 299 (479)
Q Consensus 281 ~LG~ay~~~g~~eeAi~~~ 299 (479)
+++......|+++.|..+|
T Consensus 728 ~~~~~a~~~~~~~~A~~~~ 746 (814)
T 3mkq_A 728 TLAKDAETTGKFNLAFNAY 746 (814)
T ss_dssp HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCchHHHHHHH
Confidence 4555555555555555444
No 261
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=80.27 E-value=3.3 Score=40.65 Aligned_cols=71 Identities=18% Similarity=0.294 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhc--CCCChhHHHHHHHHHHHH-HcCCChhHHHHHHHHHHH
Q 011692 234 VDILSALAEVALERED---IETSLSDYQKALTILERMV--EPDSRHIAELNFRICLCL-EIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 234 A~v~~~LGev~le~g~---yeeAl~dy~kAL~I~~~ll--g~d~r~iAea~~~LG~ay-~~~g~~eeAi~~~ekAL~ 304 (479)
++.|.-|+++.....+ -+.|...|++|+.|.+..+ +|.||.---...|.+.-| +.+++.++|+..-++|+.
T Consensus 149 GDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 149 GDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred chHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4555555555433222 3688999999999999888 999987444444555444 468899988887777664
No 262
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.24 E-value=12 Score=29.65 Aligned_cols=37 Identities=8% Similarity=0.001 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 275 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 275 iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
-|..+.+.++-....|+|++|+.+|..|++.|..-+.
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k 48 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALK 48 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666778899999999999999998877654
No 263
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=79.97 E-value=50 Score=32.77 Aligned_cols=87 Identities=9% Similarity=-0.086 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHH--------HHHHHHHHhcCC---CChhHHHHHHHHH
Q 011692 215 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQ--------KALTILERMVEP---DSRHIAELNFRIC 283 (479)
Q Consensus 215 ~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~--------kAL~I~~~llg~---d~r~iAea~~~LG 283 (479)
++..|..-..+..+....-.+.|..+|.++++-++|.+|..||- .+..+.-+.+.. +.+.-+..+.-.+
T Consensus 115 fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~Ra 194 (312)
T 2wpv_A 115 VITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRL 194 (312)
T ss_dssp HHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHH
Confidence 34555554555544344456889999999999999999999873 344444444332 4455555554444
Q ss_pred -HHHHcCCChhHHHHHHHH
Q 011692 284 -LCLEIGSKPQEAIPYCQK 301 (479)
Q Consensus 284 -~ay~~~g~~eeAi~~~ek 301 (479)
+.|...++...|...|+.
T Consensus 195 VL~yL~l~n~~~A~~~~~~ 213 (312)
T 2wpv_A 195 VFNYLFISNISFAHESKDI 213 (312)
T ss_dssp HHHHHHTTBHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHH
Confidence 345667787777766654
No 264
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=79.14 E-value=15 Score=31.28 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=20.2
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhc
Q 011692 246 EREDIETSLSDYQKALTILERMV 268 (479)
Q Consensus 246 e~g~yeeAl~dy~kAL~I~~~ll 268 (479)
..++|++|+.+|..|++++...+
T Consensus 30 ~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHHHHHH
Confidence 55999999999999999987764
No 265
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=79.12 E-value=40 Score=34.00 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Q 011692 274 HIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 310 (479)
Q Consensus 274 ~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl 310 (479)
..|.+||..|..+...++|.+||.+++.|+..++.-+
T Consensus 250 ~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 286 (363)
T 3rau_A 250 FAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAI 286 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3688999999999999999999999999998766543
No 266
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=78.61 E-value=12 Score=30.60 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 275 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 275 iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
-|..+.+.++-+...++|++|+.+|..||+.|...+.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk 50 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLK 50 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777778899999999999999998776654
No 267
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.84 E-value=16 Score=37.12 Aligned_cols=99 Identities=15% Similarity=0.029 Sum_probs=70.9
Q ss_pred ChHHHHHHHHHHHHHHHH----HhcC------CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 011692 207 SDLDLAWKMLDVARAIAE----KHWG------DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIA 276 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iye----k~~~------~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iA 276 (479)
.|.+.|.+.|+....-+. +... .......+...++.+|+..++++.|...++++-.+....-+.+.+..+
T Consensus 90 ~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~ 169 (393)
T 4b4t_O 90 KDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITN 169 (393)
T ss_dssp TCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHH
Confidence 456777777764422221 1111 012356788899999999999999999999999998887666666677
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 277 ELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 277 ea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
..|+..+..|...++|..+..++-..+..
T Consensus 170 ~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 170 SFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 77777888888999988776666665543
No 268
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=77.76 E-value=39 Score=35.08 Aligned_cols=50 Identities=16% Similarity=0.243 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
+..|...+.+....+-.|+|+.+..+|++||.. .| ..+++..|-+-....
T Consensus 11 i~~aR~vyer~l~~~P~~~~e~~~~iferal~~--------~p-s~~LW~~Y~~f~~~~ 60 (493)
T 2uy1_A 11 LSSPSAIMEHARRLYMSKDYRSLESLFGRCLKK--------SY-NLDLWMLYIEYVRKV 60 (493)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHSTT--------CC-CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcc--------CC-CHHHHHHHHHHHHHh
Confidence 556788888888888889999999999999984 45 566777776665554
No 269
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=77.19 E-value=9.5 Score=30.80 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 275 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 275 iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
-|..+..-++-+...|+|++|+.+|+.||+.|..-+.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk 51 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLK 51 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHh
Confidence 3556667777788999999999999999998776654
No 270
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=76.56 E-value=27 Score=35.67 Aligned_cols=48 Identities=4% Similarity=0.048 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHH
Q 011692 248 EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 295 (479)
Q Consensus 248 g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeA 295 (479)
-+|...|..++.-|.-+.+.+..-|..+-.++..|.-.+....+.+..
T Consensus 63 r~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~ 110 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNT 110 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHH
Confidence 455555555555555555554444444444444444444444444443
No 271
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=75.94 E-value=47 Score=34.40 Aligned_cols=77 Identities=16% Similarity=0.088 Sum_probs=51.3
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHH
Q 011692 217 DVARAIAEKHWGDSMEKVDILSALAEVALERE-DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 295 (479)
Q Consensus 217 e~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g-~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeA 295 (479)
+.||.||++. ........+|...+.+-...+ +++.|...|+.+++. + ++.+.+-..| ..-+...|+.+.|
T Consensus 303 ~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~----~-~~~~~~~~~y---id~e~~~~~~~~a 373 (493)
T 2uy1_A 303 ELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLK----H-PDSTLLKEEF---FLFLLRIGDEENA 373 (493)
T ss_dssp HHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH----C-TTCHHHHHHH---HHHHHHHTCHHHH
T ss_pred HHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHH----C-CCCHHHHHHH---HHHHHHcCCHHHH
Confidence 5677777776 222224567777777776666 599999999999984 3 3444433333 3334567888899
Q ss_pred HHHHHHH
Q 011692 296 IPYCQKA 302 (479)
Q Consensus 296 i~~~ekA 302 (479)
...|+++
T Consensus 374 R~l~er~ 380 (493)
T 2uy1_A 374 RALFKRL 380 (493)
T ss_dssp HHHHHHS
T ss_pred HHHHHHH
Confidence 9888886
No 272
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=74.86 E-value=5.1 Score=32.10 Aligned_cols=36 Identities=25% Similarity=0.263 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 276 AELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 276 Aea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
|..+.+.|+-+...|+|++|+.+|+.||+.+...+.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk 46 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIV 46 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 344555667778899999999999999998877654
No 273
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=74.38 E-value=6.2 Score=31.71 Aligned_cols=37 Identities=24% Similarity=0.166 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 275 IAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 275 iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
-|..+.+.|+-+...|+|++|+.+|+.||+.+..-+.
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk 54 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVS 54 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 3455566677788999999999999999998777654
No 274
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.47 E-value=17 Score=31.28 Aligned_cols=78 Identities=13% Similarity=0.058 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCccccccccccccccccchhhhHHHHH
Q 011692 276 AELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAE 355 (479)
Q Consensus 276 Aea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~E 355 (479)
|..|.+-|+.+...|+.+.|+.+|++.|.-+.+-|. =-. ..++ ..+..-...+.=
T Consensus 22 AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~-------I~~---------~~~~---------~~g~~we~Ar~l 76 (116)
T 2dl1_A 22 AFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGIS-------ISS---------KESE---------HTGPGWESARQM 76 (116)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHS-------SCC---------CCTT---------CCCSHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhcc-------ccc---------cCCC---------CCChhHHHHHHH
Confidence 444555555555567788888888777754333222 000 0000 112222344555
Q ss_pred HHHHHhhHHHHHHHHHHHHHhhc
Q 011692 356 IETLSGLCGDLEKKLEDLQQVAL 378 (479)
Q Consensus 356 ieelk~ll~dl~~KieDlk~~~~ 378 (479)
+.-++..|..++.||.+|...+.
T Consensus 77 q~KM~~nL~~v~~RL~~Le~~~~ 99 (116)
T 2dl1_A 77 QQKMKETLQNVRTRLEILEKGLA 99 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 66677888999999999988644
No 275
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=70.21 E-value=1.3 Score=38.41 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=39.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhcC-CCChhH----------------HHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 242 EVALEREDIETSLSDYQKALTILERMVE-PDSRHI----------------AELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 242 ev~le~g~yeeAl~dy~kAL~I~~~llg-~d~r~i----------------Aea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
.+......+..++..|+++++..+.+-. .+...+ -.++..||.=|...-.+++|+.+|++=++
T Consensus 19 ~l~~~~~~l~~~i~e~~~~~e~l~~l~~~~~~~~lvplg~~~yv~a~i~~~~~V~v~lG~g~~vE~~~~eA~~~l~~r~~ 98 (133)
T 1fxk_C 19 LIQQQMEAVRATISELEILEKTLSDIQGKDGSETLVPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQKN 98 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEEEETTEEEEEECCSTTEEEEEEETTEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEcCCCcEEEEEECCCCEEEEEcCCCEEEEeeHHHHHHHHHHHHH
Confidence 3444455667888899999998887653 111100 00222244333333345777777766555
Q ss_pred HHHHHHHHHH
Q 011692 305 VCKSRVQRLL 314 (479)
Q Consensus 305 I~k~rl~~l~ 314 (479)
.++.++..++
T Consensus 99 ~l~~~~~~l~ 108 (133)
T 1fxk_C 99 ELESTLQKMG 108 (133)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555443
No 276
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=69.37 E-value=71 Score=33.86 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=11.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHH
Q 011692 237 LSALAEVALEREDIETSLSDY 257 (479)
Q Consensus 237 ~~~LGev~le~g~yeeAl~dy 257 (479)
+..++.+....|+|..|...|
T Consensus 726 ~~~~~~~a~~~~~~~~A~~~~ 746 (814)
T 3mkq_A 726 LVTLAKDAETTGKFNLAFNAY 746 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHcCchHHHHHHH
Confidence 445555666666666555443
No 277
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=69.33 E-value=11 Score=38.62 Aligned_cols=71 Identities=14% Similarity=-0.034 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALER--EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 233 ~A~v~~~LGev~le~--g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
.--++.+||++---. .....++..|.+|+...+.+|+..|- -.|..+|-.|.+.++|.+|+.++-.|-.++
T Consensus 254 YPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~Hv---YPYtylgGy~yR~~~~reAl~~WA~Aa~Vi 326 (472)
T 3re2_A 254 YPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHI---YPYTYLGGYYYRKKKYYEAIASWVDAGYVA 326 (472)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cchhhhhhhhhhcchHHHHHHHHHHHHHHH
Confidence 344667777765432 22234999999999999999988884 678889999999999999999998887663
No 278
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=66.42 E-value=21 Score=37.29 Aligned_cols=83 Identities=8% Similarity=0.002 Sum_probs=59.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|+++|+..+. .+..|. ..+|+.|-..|...|++++|+..|++... .-+.|+ ..+|..|=.+|
T Consensus 84 ~~l~~A~~lf~~M~~-----~G~~Pd-~~tyn~lI~~~~~~g~~~~A~~l~~~M~~---~g~~Pd----~~tyn~lI~~~ 150 (501)
T 4g26_A 84 PGLSRGFDIFKQMIV-----DKVVPN-EATFTNGARLAVAKDDPEMAFDMVKQMKA---FGIQPR----LRSYGPALFGF 150 (501)
T ss_dssp HHHHHHHHHHHHHHH-----TTCCCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHH-----hCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHH---cCCCCc----cceehHHHHHH
Confidence 567777777654431 122232 45899999999999999999999987532 223333 35788888899
Q ss_pred HcCCChhHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKA 302 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekA 302 (479)
...|++++|...|+.-
T Consensus 151 ~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 151 CRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHH
Confidence 9999999998888664
No 279
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=65.84 E-value=93 Score=29.53 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011692 293 QEAIPYCQKAISVCKSRVQRLLNEVKSL 320 (479)
Q Consensus 293 eeAi~~~ekAL~I~k~rl~~l~~~l~~~ 320 (479)
.+-...+++=|+..+.++..++..+..+
T Consensus 89 ~kE~~aL~kEie~~~~~i~~lE~eile~ 116 (256)
T 3na7_A 89 ERELRSLNIEEDIAKERSNQANREIENL 116 (256)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666666666655544
No 280
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=65.80 E-value=9 Score=30.62 Aligned_cols=35 Identities=11% Similarity=0.155 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHH
Q 011692 279 NFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRL 313 (479)
Q Consensus 279 ~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~~l 313 (479)
+.++|.=|...|+|+-|+.||+.++..+.+.|..+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~ 49 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSV 49 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhc
Confidence 45678888899999999999999999888887755
No 281
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=65.40 E-value=8.1 Score=25.19 Aligned_cols=27 Identities=19% Similarity=0.484 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 011692 351 DKEAEIETLSGLCGDLEKKLEDLQQVA 377 (479)
Q Consensus 351 ~~~~Eieelk~ll~dl~~KieDlk~~~ 377 (479)
.++.++..|..++.+|++++.-|++.+
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~tv 29 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEETV 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788899999999999999998864
No 282
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=62.72 E-value=9.7 Score=35.79 Aligned_cols=95 Identities=9% Similarity=-0.001 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC
Q 011692 214 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 291 (479)
Q Consensus 214 e~Le~Ar~Iyek~~~--~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~ 291 (479)
.+|+.+..-|..... +.++...+|...++.+ ..++..++...|.-... +-.| ..+|.-|-..+..|+..|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~---~~IG---~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFN---KGIG---TKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHH---HTSS---TTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHH---CCCc---HHHHHHHHHHHHHHHHcCC
Confidence 578888888866544 3578899999998876 23335566665553322 2222 3458889999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 011692 292 PQEAIPYCQKAISVCKSRVQRLLN 315 (479)
Q Consensus 292 ~eeAi~~~ekAL~I~k~rl~~l~~ 315 (479)
|.+|...|+.+|.-.-.=+++|+.
T Consensus 131 ~~~A~~Vy~~GI~~~A~P~~rL~~ 154 (202)
T 3esl_A 131 FLEAKVLLELGAENNCRPYNRLLR 154 (202)
T ss_dssp HHHHHHHHHHHHHTTCBSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccHHHHHH
Confidence 999999999998765444444443
No 283
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=61.64 E-value=24 Score=36.84 Aligned_cols=85 Identities=11% Similarity=0.014 Sum_probs=61.9
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhH
Q 011692 217 DVARAIAEKHWGDSMEKVDILSALAEVALER--EDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQE 294 (479)
Q Consensus 217 e~Ar~Iyek~~~~~~~~A~v~~~LGev~le~--g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ee 294 (479)
++-..+|+.-. -.+.--++.+||++---. -..+.++..|.+|+.+.+.+|...| .-.|..||-.|.+.++|.+
T Consensus 247 ~LLWlLyd~Gh--l~~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~h---vYPYtYlgG~~~R~~~~~e 321 (489)
T 4gq4_A 247 KLLWLLYDLGH--LERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVRE 321 (489)
T ss_dssp HHHHHHHHHTT--TTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhccc--hhhcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCc---ccceeecchHHHHhhhHHH
Confidence 44445555431 123345677777765332 2234588999999999999998887 3678889999999999999
Q ss_pred HHHHHHHHHHHH
Q 011692 295 AIPYCQKAISVC 306 (479)
Q Consensus 295 Ai~~~ekAL~I~ 306 (479)
|+.++-.|-.++
T Consensus 322 Al~~wa~aa~Vi 333 (489)
T 4gq4_A 322 ALQAWADTATVI 333 (489)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHhhhhhhhh
Confidence 999998887653
No 284
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=60.26 E-value=12 Score=33.86 Aligned_cols=89 Identities=12% Similarity=0.127 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHHHHcCC
Q 011692 214 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 290 (479)
Q Consensus 214 e~Le~Ar~Iyek~~~--~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d-~r~iAea~~~LG~ay~~~g 290 (479)
.+|+.+...|..... +.++...++...++.. ++ +.. |+..++... -..+|.-|-..+..|+..|
T Consensus 44 ~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~~---p~~-------if~~L~~~~IG~~~AlfY~~wA~~lE~~~ 110 (164)
T 2wvi_A 44 TLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---NE---PLD-------MYSYLHNQGIGVSLAQFYISWAEEYEARE 110 (164)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---SC---HHH-------HHHHHHHTTSSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---CC---HHH-------HHHHHHHCCcchhhHHHHHHHHHHHHHcC
Confidence 468888888765543 3578889999888874 22 333 333333222 2446888999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHH
Q 011692 291 KPQEAIPYCQKAISVCKSRVQRLLN 315 (479)
Q Consensus 291 ~~eeAi~~~ekAL~I~k~rl~~l~~ 315 (479)
+|.+|.+.|+.+|.-.-.=+..|+.
T Consensus 111 ~~~~A~~Iy~~Gi~~~A~P~~~L~~ 135 (164)
T 2wvi_A 111 NFRKADAIFQEGIQQKAEPLERLQS 135 (164)
T ss_dssp CHHHHHHHHHHHHHTTCBSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 9999999999998765444444443
No 285
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=60.10 E-value=9 Score=30.64 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Q 011692 236 ILSALAEVALEREDIETSLSDYQKALTILERMV 268 (479)
Q Consensus 236 v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ll 268 (479)
-+..+|.=|.-.|+|+.|+.+|+.++....+++
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l 46 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQMNKYL 46 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 456778888889999999999999999887765
No 286
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=58.79 E-value=23 Score=27.90 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEI 95 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei 95 (479)
.--.-+.+|-.++.+|++++|+.+|.+|+.+
T Consensus 16 ~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 16 FFLEEIQLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3556688999999999999999999999986
No 287
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=58.77 E-value=12 Score=33.58 Aligned_cols=90 Identities=13% Similarity=0.015 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHHHHcCC
Q 011692 214 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 290 (479)
Q Consensus 214 e~Le~Ar~Iyek~~~--~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d-~r~iAea~~~LG~ay~~~g 290 (479)
.+|+++...|..... +.++...++...++.. ++ ...|...++... -..+|.-|-..+..|+..|
T Consensus 49 ~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~d-------p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g 115 (152)
T 4a1g_A 49 TLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SD-------LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQG 115 (152)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SC-------HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CC-------HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcC
Confidence 678888888865543 3577888888888763 12 344444444333 3456888999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHH
Q 011692 291 KPQEAIPYCQKAISVCKSRVQRLLNE 316 (479)
Q Consensus 291 ~~eeAi~~~ekAL~I~k~rl~~l~~~ 316 (479)
++.+|...|+.+|.-.-.=+++|+..
T Consensus 116 ~~~~A~~Vy~~Gi~~~A~P~~rL~~~ 141 (152)
T 4a1g_A 116 ELQHASAVLQRGIQNQAEPREFLQQQ 141 (152)
T ss_dssp CHHHHHHHHHHHHHTTCBSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCccHHHHHHH
Confidence 99999999999997654445555443
No 288
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.07 E-value=37 Score=29.14 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHH---HHHHHHHHH
Q 011692 234 VDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQK---AISVCKSRV 310 (479)
Q Consensus 234 A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ek---AL~I~k~rl 310 (479)
|-.|.+-|.-.-+.|+-+.|+.+|++.+.-+.+-+.-.... .+ .....|++|..+-+| -|...+.||
T Consensus 22 AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~-~~---------~~g~~we~Ar~lq~KM~~nL~~v~~RL 91 (116)
T 2dl1_A 22 AFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKE-SE---------HTGPGWESARQMQQKMKETLQNVRTRL 91 (116)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCC-TT---------CCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccC-CC---------CCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666677999999999999888777654321100 00 112246667666444 555556677
Q ss_pred HHHHHHHh
Q 011692 311 QRLLNEVK 318 (479)
Q Consensus 311 ~~l~~~l~ 318 (479)
..|+....
T Consensus 92 ~~Le~~~~ 99 (116)
T 2dl1_A 92 EILEKGLA 99 (116)
T ss_dssp HHHHHHHC
T ss_pred HHHHhcCC
Confidence 76655443
No 289
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=57.52 E-value=2.2 Score=41.67 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CCCChhHHHHHHHHHHHHHhh
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
..+..|..|+.+|..+-..|+|.+|..+|.+|++++.... ++..+..-..+-..-.-|+..
T Consensus 18 p~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~R 79 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDR 79 (257)
T ss_dssp --------------------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3566799999999999999999999999999999877665 455666655555555555544
No 290
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=56.32 E-value=21 Score=32.29 Aligned_cols=50 Identities=22% Similarity=0.157 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 208 DLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 208 dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
|.+.|.++|..|+.+ +...|.+|...|..-+.+|++..|..-+.+|+.+.
T Consensus 75 D~d~aR~vy~~a~~~-------hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 75 EPDDARDYFQMARAN-------CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp CGGGCHHHHHHHHHH-------CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 455677788888776 22359999999999999999999999999988843
No 291
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=52.46 E-value=13 Score=35.40 Aligned_cols=80 Identities=10% Similarity=0.020 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHHHHcCC
Q 011692 214 KMLDVARAIAEKHWG--DSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPD-SRHIAELNFRICLCLEIGS 290 (479)
Q Consensus 214 e~Le~Ar~Iyek~~~--~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d-~r~iAea~~~LG~ay~~~g 290 (479)
.+|+.+..-|..... +.++...+|...++.. +.+. .|+..++... -..+|.-|-..+..|+..|
T Consensus 98 ~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~~------~~p~-------~if~~L~~~~IG~~~AlfYe~wA~~lE~~g 164 (223)
T 4aez_C 98 TLLERCTREFVRNPLYKDDVRYLRIWMQYVNYI------DEPV-------ELFSFLAHHHIGQESSIFYEEYANYFESRG 164 (223)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTTC------SCHH-------HHHHHHHHTTCSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHcc------CCHH-------HHHHHHHHCCcchhHHHHHHHHHHHHHHcC
Confidence 578888888866544 3477888888888742 2333 3333333222 2445888999999999999
Q ss_pred ChhHHHHHHHHHHHHH
Q 011692 291 KPQEAIPYCQKAISVC 306 (479)
Q Consensus 291 ~~eeAi~~~ekAL~I~ 306 (479)
+|.+|...|+++|.-.
T Consensus 165 ~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 165 LFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999998755
No 292
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=52.07 E-value=25 Score=36.81 Aligned_cols=71 Identities=13% Similarity=0.038 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALEREDI--ETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~y--eeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
.--++.+||++---.--. ..++..|.+|+...+.+|...|- -.|..+|-.|.+.++|.+|+.++-.|-.++
T Consensus 276 YPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~Hv---YPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi 348 (550)
T 3u84_A 276 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVI 348 (550)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCc---cceeecchhhhhcchHHHHHHHHHHHHHHH
Confidence 344566777654322111 24899999999999999988884 678889999999999999999998887664
No 293
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=50.58 E-value=12 Score=41.66 Aligned_cols=54 Identities=22% Similarity=0.280 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhccCCcC
Q 011692 68 ELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADPL 129 (479)
Q Consensus 68 ~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~esdvL 129 (479)
-|..++.-++..|+|+-|..+-.+|+.+ +|.-..+++.+..+|..+++.+++.|
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALL 392 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALF 392 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHH
Confidence 4556677778899999999999999999 89999999999999999999988754
No 294
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=50.35 E-value=65 Score=28.34 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChh
Q 011692 232 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRH 274 (479)
Q Consensus 232 ~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~ 274 (479)
..|..+...|.+|...|++++|--.|-+.+.|....++ .||.
T Consensus 38 rta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ip-kHpd 79 (146)
T 2xze_A 38 RSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLP-KHRD 79 (146)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGG-GSTT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcc-cCcc
Confidence 46778888999999999999999999999999986665 3443
No 295
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=49.92 E-value=18 Score=29.09 Aligned_cols=32 Identities=38% Similarity=0.367 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCh
Q 011692 350 TDKEAEIETLSGLCGDLEKKLEDLQQVALFPK 381 (479)
Q Consensus 350 ~~~~~Eieelk~ll~dl~~KieDlk~~~~~p~ 381 (479)
+..++|++.|..-|..|+.+|..|...|.+|.
T Consensus 18 ykeqrEle~le~~Ie~LE~~i~~le~~ladp~ 49 (89)
T 2lw1_A 18 YKLQRELEQLPQLLEDLEAKLEALQTQVADAS 49 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 67789999999999999999999999998875
No 296
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=49.91 E-value=35 Score=28.19 Aligned_cols=32 Identities=22% Similarity=0.456 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 011692 64 EFADELMEKGTNALKESDYGEAAECFSRALEI 95 (479)
Q Consensus 64 ~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei 95 (479)
...-.-+.+|-.++.+|+++.|+.+|.+|+.+
T Consensus 18 ~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~V 49 (95)
T 1om2_A 18 KFFLEEIQLGEELLAQGDYEKGVDHLTNAIAV 49 (95)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44667788999999999999999999999987
No 297
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=48.16 E-value=1.4e+02 Score=29.79 Aligned_cols=48 Identities=6% Similarity=-0.177 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
...+..+...++..|+|.+|+..+.+++.+ ||-.=.+|..+=++|+..
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~--------~P~~E~~~~~lm~al~~~ 218 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFE--------HPYREPLWTQLITAYYLS 218 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHc
Confidence 445566777888999999999999999887 787777888887888754
No 298
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=48.11 E-value=2.2e+02 Score=28.42 Aligned_cols=87 Identities=10% Similarity=0.031 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHH--------HHHHHHHHhcCCCChhHHHHHHHHH-HH
Q 011692 215 MLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQ--------KALTILERMVEPDSRHIAELNFRIC-LC 285 (479)
Q Consensus 215 ~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~--------kAL~I~~~llg~d~r~iAea~~~LG-~a 285 (479)
++..|..--.++......-.+.|..+|.++++-++|.+|..+|- .+.++.-+.+....+.-+..+.-.+ +.
T Consensus 117 fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~ 196 (336)
T 3lpz_A 117 FVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLP 196 (336)
T ss_dssp HHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 34444444444443334456789999999999999999998872 3334444444433344444444333 34
Q ss_pred HHcCCChhHHHHHHHH
Q 011692 286 LEIGSKPQEAIPYCQK 301 (479)
Q Consensus 286 y~~~g~~eeAi~~~ek 301 (479)
|...++...|...|+.
T Consensus 197 yL~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 197 YLLVANVRAANTAYRI 212 (336)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHH
Confidence 5567777777665544
No 299
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=47.74 E-value=1.4e+02 Score=27.76 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHH------------HHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHH
Q 011692 232 EKVDILSALAEVALEREDIETSLSDYQKAL------------TILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYC 299 (479)
Q Consensus 232 ~~A~v~~~LGev~le~g~yeeAl~dy~kAL------------~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ 299 (479)
+.+.+..--..++....+|..|+..+++-| +|+.-++.+.+.. --+.-+|..+...|..++||.||
T Consensus 60 NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkE--fFy~l~a~lltq~g~r~EaI~y~ 137 (242)
T 3kae_A 60 NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEE--FFESLLGDLCTLSGYREEGIGHY 137 (242)
T ss_dssp CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHH--HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHH--HHHHHHHHHHHHhcCHHHhhhHh
Confidence 344444455667888899999999999888 2223334444432 34556899999999999999999
Q ss_pred HHHHHH
Q 011692 300 QKAISV 305 (479)
Q Consensus 300 ekAL~I 305 (479)
..+..+
T Consensus 138 ~~Sf~~ 143 (242)
T 3kae_A 138 VRSFGK 143 (242)
T ss_dssp HHHHHH
T ss_pred hhhcCC
Confidence 987654
No 300
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=47.36 E-value=23 Score=37.44 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhh
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYK 121 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ 121 (479)
-.-|+.+|..+.....+..|..+|.+|+.+ .|.++.+|+.+|......
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~ 199 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSK 199 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHT
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhcc
Confidence 457889999999999999999999999999 899999999999877664
No 301
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=47.11 E-value=22 Score=36.70 Aligned_cols=56 Identities=7% Similarity=0.040 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 250 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 250 yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.++.|..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 45667777777765433211223445567778999999999999999999888864
No 302
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=45.44 E-value=35 Score=36.27 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCCh
Q 011692 250 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKP 292 (479)
Q Consensus 250 yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~ 292 (479)
-..|+.+|++|+..++++-..+++.....|.+++.-|+..|+|
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDy 490 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDY 490 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHH
Confidence 3689999999999999999999999999999999999988875
No 303
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=44.84 E-value=36 Score=24.03 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=25.3
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHhhc
Q 011692 349 LTDKEAEIETLSGLCGDLEKKLEDLQQVAL 378 (479)
Q Consensus 349 ~~~~~~Eieelk~ll~dl~~KieDlk~~~~ 378 (479)
+..+.+||.-.+.=|.+|+.|+.+|++...
T Consensus 11 I~kVdrEI~Kte~kI~~lqkKlkeLee~a~ 40 (42)
T 2l5g_B 11 MDRVDREITMVEQQISKLKKKQQQLEEEAA 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 346778999999999999999999988644
No 304
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=44.76 E-value=57 Score=27.94 Aligned_cols=28 Identities=29% Similarity=0.359 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 011692 349 LTDKEAEIETLSGLCGDLEKKLEDLQQV 376 (479)
Q Consensus 349 ~~~~~~Eieelk~ll~dl~~KieDlk~~ 376 (479)
+.+++.||++|+.-|.|...+++.|+.-
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erlr~~ 100 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERLRRE 100 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4577788888888888888888888763
No 305
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=44.03 E-value=25 Score=29.14 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 011692 238 SALAEVALEREDIETSLSDYQKALTILE 265 (479)
Q Consensus 238 ~~LGev~le~g~yeeAl~dy~kAL~I~~ 265 (479)
..+|+.++..|+++.|+.||-+||.++.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 4699999999999999999999988764
No 306
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=43.97 E-value=98 Score=36.05 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=56.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCL 286 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay 286 (479)
++++.|+++|+..+..-.+.. .+ -+.+|+.|=.-|+..|++++|+..|++- ...-+.|+. .+|.-|=.+|
T Consensus 141 G~leeA~~Lf~eM~~m~~kG~--~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM---~~~G~~PDv----vTYntLI~gl 210 (1134)
T 3spa_A 141 DQLPLAHHLLVVHHGQRQKRK--LL-TLDMYNAVMLGWARQGAFKELVYVLFMV---KDAGLTPDL----LSYAAALQCM 210 (1134)
T ss_dssp TCHHHHHHHHHHHHHSHHHHT--TC-CHHHHHHHHHHHHHHTCHHHHHHHHHHH---HHTTCCCCH----HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhcCC--CC-CHhHHHHHHHHHHhCCCHHHHHHHHHHH---HHcCCCCcH----HHHHHHHHHH
Confidence 455555555544333222221 22 2568999999999999999999999865 333444443 5666666678
Q ss_pred HcCCCh-hHHHHHHHHHH
Q 011692 287 EIGSKP-QEAIPYCQKAI 303 (479)
Q Consensus 287 ~~~g~~-eeAi~~~ekAL 303 (479)
++.|+. ++|...|+.-.
T Consensus 211 cK~G~~~e~A~~Ll~EM~ 228 (1134)
T 3spa_A 211 GRQDQDAGTIERCLEQMS 228 (1134)
T ss_dssp HHHTCCHHHHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHH
Confidence 888875 67778877654
No 307
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=43.20 E-value=22 Score=36.68 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 250 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 250 yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.++.|..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 45666777777665543222234445667778999999999999999999888864
No 308
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=41.78 E-value=2.9e+02 Score=27.99 Aligned_cols=26 Identities=27% Similarity=0.395 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh
Q 011692 351 DKEAEIETLSGLCGDLEKKLEDLQQV 376 (479)
Q Consensus 351 ~~~~Eieelk~ll~dl~~KieDlk~~ 376 (479)
.-++.|++|+.-|..|.++|++++..
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (471)
T 3mq9_A 440 QGQKKVEELEGEITTLNHKLQDASAE 465 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778888788888888877654
No 309
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=40.07 E-value=1.5e+02 Score=31.09 Aligned_cols=20 Identities=15% Similarity=0.247 Sum_probs=8.6
Q ss_pred HHHHHHhhHHHHHHHHHHHH
Q 011692 355 EIETLSGLCGDLEKKLEDLQ 374 (479)
Q Consensus 355 Eieelk~ll~dl~~KieDlk 374 (479)
.|.-|+..|.++..||.-|+
T Consensus 133 ~IrvLq~~l~~q~skIQRLE 152 (491)
T 1m1j_A 133 RIKALQNSIQEQVVEMKRLE 152 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444443
No 310
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=38.49 E-value=1.3e+02 Score=25.83 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChh
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALE 106 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe 106 (479)
.+.+...+.+++.++..|||+++.....+|..|..+.-.-..++
T Consensus 33 ydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L~~sLd~e 76 (131)
T 3iqc_A 33 YEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYE 76 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTBCHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 44588889999999999999999999999999998876655544
No 311
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=38.48 E-value=99 Score=26.14 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 011692 299 CQKAISVCKSRVQRLLNEVKSL 320 (479)
Q Consensus 299 ~ekAL~I~k~rl~~l~~~l~~~ 320 (479)
+..|+++++.|+..|+..++.+
T Consensus 86 ~~eA~~~l~~r~~~l~~~~~~l 107 (133)
T 1fxk_C 86 FEDAMESIKSQKNELESTLQKM 107 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999998887666543
No 312
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=38.39 E-value=23 Score=27.85 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=24.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 237 LSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 237 ~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
...+|+-++..|++++|+.+|-+||.++
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3579999999999999999999888764
No 313
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=38.33 E-value=25 Score=36.34 Aligned_cols=55 Identities=16% Similarity=0.025 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 250 IETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 250 yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
|++-+.+++.|+.++.......+..-.-++.-|+.+|.+.++|++|+.+.++.|.
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4555666666655433211122334556777899999999999999998888775
No 314
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=37.42 E-value=99 Score=25.67 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=26.7
Q ss_pred chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 011692 231 MEKVDILSALAEVALEREDIETSLSDYQKALT 262 (479)
Q Consensus 231 ~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~ 262 (479)
+..|.-.+.-+...+..++|..|..+.++|.-
T Consensus 31 l~~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe~ 62 (98)
T 4fm3_A 31 LKLAQDKYAAAQIAMTAESYKKARLLAEQAEL 62 (98)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 55677888889999999999999988887753
No 315
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.05 E-value=3.4e+02 Score=27.11 Aligned_cols=58 Identities=17% Similarity=0.038 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 011692 207 SDLDLAWKMLDVARAIAEKHWGDS-MEKVDILSALAEVALEREDIETSLSDYQKALTIL 264 (479)
Q Consensus 207 ~dle~Awe~Le~Ar~Iyek~~~~~-~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~ 264 (479)
+|+..|..+++.+..++....+.. .-.+..|...+..|...++|..+-.++-..|...
T Consensus 141 ~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 141 NDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp SCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 567788899999998888765533 3467888889999999999988766655555543
No 316
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=35.92 E-value=50 Score=29.10 Aligned_cols=45 Identities=7% Similarity=0.099 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChh
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALE 106 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe 106 (479)
.-+..|..|+..+..+...||++.|--+|-+.+.|...+... ||+
T Consensus 35 ~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ipk-Hpd 79 (146)
T 2xze_A 35 RYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPK-HRD 79 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGG-STT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHccc-Ccc
Confidence 356779999999999999999999999999999998766533 665
No 317
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=35.72 E-value=54 Score=29.95 Aligned_cols=55 Identities=16% Similarity=0.090 Sum_probs=40.6
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Q 011692 243 VALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRV 310 (479)
Q Consensus 243 v~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl 310 (479)
+.++.|+|+.|.+..+ .+ ++ -..+.+||......|+++-|..+|+++-.+-+..+
T Consensus 14 LAL~lg~l~~A~e~a~-------~l---~~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~ 68 (177)
T 3mkq_B 14 LALEYGNLDAALDEAK-------KL---ND---SITWERLIQEALAQGNASLAEMIYQTQHSFDKLSF 68 (177)
T ss_dssp HHHHTTCHHHHHHHHH-------HH---CC---HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHH
T ss_pred HHHhcCCHHHHHHHHH-------Hh---CC---HHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHH
Confidence 4567788777766543 22 22 35788999999999999999999999776655433
No 318
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=35.33 E-value=60 Score=37.49 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHH-------------HHhcC--CCChhHHHHHHHHHHHHHcCCChhHHHHHHHH
Q 011692 237 LSALAEVALEREDIETSLSDYQKALTIL-------------ERMVE--PDSRHIAELNFRICLCLEIGSKPQEAIPYCQK 301 (479)
Q Consensus 237 ~~~LGev~le~g~yeeAl~dy~kAL~I~-------------~~llg--~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ek 301 (479)
.+.+|.+++..|+|++|..+|++|-.-. ..+.+ .....++.=|+.+...++..+.++.++.+-+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4789999999999999999998872110 00000 11222344577788899999999999999999
Q ss_pred HHHHH
Q 011692 302 AISVC 306 (479)
Q Consensus 302 AL~I~ 306 (479)
||+..
T Consensus 925 Ai~~~ 929 (1139)
T 4fhn_B 925 ADASK 929 (1139)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 98754
No 319
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=35.08 E-value=73 Score=37.07 Aligned_cols=67 Identities=7% Similarity=-0.088 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 232 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 232 ~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
..-.+|+.|=+.++..|+.++|...|.+-..+..+-+.++ ..+|.-|=..|+..|++++|+..|++-
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM 191 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMV 191 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3566899999999999999999999988766655444333 268888999999999999999988764
No 320
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=35.00 E-value=43 Score=34.64 Aligned_cols=55 Identities=15% Similarity=0.011 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHhcC-----CCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 251 ETSLSDYQKALTILERMVE-----PDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 251 eeAl~dy~kAL~I~~~llg-----~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
++-+.+++.|+.++..... ..+..-.-++--|+.+|...++|++|+.+.+++|..
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3445566666655422111 112335567778999999999999999999988853
No 321
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=33.83 E-value=1.6e+02 Score=22.54 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHH
Q 011692 349 LTDKEAEIETLSGLCGDLEKKLEDLQ 374 (479)
Q Consensus 349 ~~~~~~Eieelk~ll~dl~~KieDlk 374 (479)
....+.||.+|+-.|..|+..|+-+|
T Consensus 51 l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 51 LRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45667899999999999998888765
No 322
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=33.56 E-value=72 Score=25.19 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhhcCChhHHHHHHHhhhh
Q 011692 350 TDKEAEIETLSGLCGDLEKKLEDLQQVALFPKSILSEILGMASA 393 (479)
Q Consensus 350 ~~~~~Eieelk~ll~dl~~KieDlk~~~~~p~s~~~e~~~~~~~ 393 (479)
+..+.|++-||+-|.+|..|+..|+. -+.|||..++
T Consensus 11 ~AVREEVevLKe~I~EL~e~~~qLE~--------EN~~Lk~~as 46 (78)
T 1dip_A 11 YAVREEVEILKEQIRELVEKNSQLER--------ENTLLKTLAS 46 (78)
T ss_dssp GTCTTSCHHHHHHHHHHHHHHHHHHH--------HHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHhCC
Confidence 45567888899999999999999987 3677887765
No 323
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=33.20 E-value=45 Score=27.29 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHcC---CChhHHHHHHHHHHHHHH
Q 011692 275 IAELNFRICLCLEIG---SKPQEAIPYCQKAISVCK 307 (479)
Q Consensus 275 iAea~~~LG~ay~~~---g~~eeAi~~~ekAL~I~k 307 (479)
.|..|.+-|+..... |+.++|+.+|++.|.-+.
T Consensus 15 ~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~ 50 (89)
T 3eab_A 15 QAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELE 50 (89)
T ss_dssp HHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHH
Confidence 345555666666655 888889999988775433
No 324
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=32.76 E-value=1.2e+02 Score=26.59 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh------CCCChhHHHHHHHHHHHHHh
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY------GELALECVNAYYQYGRALLY 120 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~------Ge~~pe~A~~y~~YG~ALl~ 120 (479)
.+-+...+.+++.++..|||+++-....+|..|..++- |+.+..+..+|-++-+-|++
T Consensus 30 ydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~egeiA~nL~~LY~y~~~~L~~ 93 (145)
T 1vh6_A 30 YNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRNIELSASMGAMYDYMYRRLVQ 93 (145)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 34588888999999999999999999999998886654 45555556666665555554
No 325
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=32.31 E-value=9.5 Score=39.34 Aligned_cols=51 Identities=18% Similarity=0.162 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh-CC-CChhHHHHHH
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHY-GE-LALECVNAYY 112 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~-Ge-~~pe~A~~y~ 112 (479)
.+..|..|+.+|..+-..|+|.+|+.+|.+|++.+.... .+ .++..-..|.
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~~k~e~~~~~~k~~ir 59 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIR 59 (444)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHH
Confidence 355788999999999999999999999999999877643 22 4454444343
No 326
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=32.24 E-value=88 Score=27.95 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCccc
Q 011692 253 SLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSLGESATSSAPAEL 332 (479)
Q Consensus 253 Al~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~~l~~~l~~~~~~~~~~~~~~~ 332 (479)
++..+..|+.....+.. .++.+...+-.|..++....+....+..|-..+.+-..+|..++..|..+..
T Consensus 68 ~~~~L~~a~~~L~~l~~-~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~rL~~ie~RL~~l~~---------- 136 (175)
T 4abx_A 68 AAGLIGEAVRALNAGAK-YDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPEALDRVEARLSALSK---------- 136 (175)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH----------
Confidence 44555555555554432 2334555555555555555544455555544444444445544444433311
Q ss_pred cccccccccccccchhhhHHHHHHHHHHhhHHHHHHHHHHHHH
Q 011692 333 DDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDLEKKLEDLQQ 375 (479)
Q Consensus 333 d~~~~~~~~~~~~~~~~~~~~~Eieelk~ll~dl~~KieDlk~ 375 (479)
-..+....+++|-....+++.+|..|..
T Consensus 137 ---------------L~RKyg~~~eell~~~~~~~~eL~~l~~ 164 (175)
T 4abx_A 137 ---------------LKNKYGPTLEDVVEFGAQAAEELAGLEE 164 (175)
T ss_dssp ---------------HHHHHCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------HHHHcCCCHHHHHHHHHHHHHHHHHHhC
Confidence 0011112456677777777777777654
No 327
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=31.96 E-value=57 Score=33.94 Aligned_cols=56 Identities=13% Similarity=0.088 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCC---CChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Q 011692 250 IETSLSDYQKALTILERMVEP---DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV 305 (479)
Q Consensus 250 yeeAl~dy~kAL~I~~~llg~---d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I 305 (479)
|++-+.+++.|+.++...++. .+..-.-++.-|+.+|...++|++|+.+.+++|..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 344556666666654332221 12334567778999999999999999999888864
No 328
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=31.48 E-value=2.2e+02 Score=32.69 Aligned_cols=63 Identities=13% Similarity=-0.096 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHcCCChhHHHHHH
Q 011692 233 KVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSR-HIAELNFRICLCLEIGSKPQEAIPYC 299 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r-~iAea~~~LG~ay~~~g~~eeAi~~~ 299 (479)
+..-|..+..++-..+.|+.++..-+.||.. .+++.. .....|.++=..+...++|++|....
T Consensus 898 l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~----~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL 961 (1139)
T 4fhn_B 898 LSCYYLHLSKKLFEESAYIDALEFSLLADAS----KETDDEDLSIAITHETLKTACAAGKFDAAHVAL 961 (1139)
T ss_dssp SHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH----CCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----ccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 4556778888888889999999999999865 333443 34557888888888889999986655
No 329
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=31.21 E-value=56 Score=37.10 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=42.8
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHH-------------HHhcCCC--ChhHHHHHHHHHHHHHcCCChhHHHHHHHHH
Q 011692 238 SALAEVALEREDIETSLSDYQKALTIL-------------ERMVEPD--SRHIAELNFRICLCLEIGSKPQEAIPYCQKA 302 (479)
Q Consensus 238 ~~LGev~le~g~yeeAl~dy~kAL~I~-------------~~llg~d--~r~iAea~~~LG~ay~~~g~~eeAi~~~ekA 302 (479)
+.+|.+|+..|+|++|..+|++|-.-. ..++++. ...++.=|+++...++..+-|+-++.+.+.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 679999999999999999999874211 0011100 1123334455667777777777777666666
Q ss_pred HH
Q 011692 303 IS 304 (479)
Q Consensus 303 L~ 304 (479)
|.
T Consensus 924 I~ 925 (950)
T 4gq2_M 924 DA 925 (950)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 330
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=31.15 E-value=44 Score=27.53 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 232 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 232 ~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
.+...+..+-.+......+..-+..++.++.=+..+-+.. .+|+.+|-+|... ..++|+..+++-++.++..|.
T Consensus 14 ~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~-----~vy~~iG~vfv~~-~~~ea~~~L~~~~e~ie~~i~ 87 (117)
T 2zqm_A 14 QLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDA-----VVYKTVGTLIVKT-TKDKAVAELKEKIETLEVRLN 87 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTC-----CEEEEETTEEEEE-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc-----HhHHHhhHHHhhc-cHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhhhccCCCCCCCccccccccccccccccchhhhHHHHHHHHHHhhHHHH
Q 011692 312 RLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDL 366 (479)
Q Consensus 312 ~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~Eieelk~ll~dl 366 (479)
.|+..++ .+++++++++.-|-.+
T Consensus 88 ~le~~~~--------------------------------~l~~~l~~lk~~l~~~ 110 (117)
T 2zqm_A 88 ALERQEK--------------------------------KLNEKLKELTAQIQSA 110 (117)
T ss_dssp HHHHHHH--------------------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--------------------------------HHHHHHHHHHHHHHHH
No 331
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=30.68 E-value=71 Score=23.67 Aligned_cols=19 Identities=42% Similarity=0.604 Sum_probs=11.7
Q ss_pred HHHHHHhhHHHHHHHHHHH
Q 011692 355 EIETLSGLCGDLEKKLEDL 373 (479)
Q Consensus 355 Eieelk~ll~dl~~KieDl 373 (479)
.|++|+.--.+|..||++|
T Consensus 26 rieelkkkweelkkkieel 44 (67)
T 1lq7_A 26 RIEELKKKWEELKKKIEEL 44 (67)
T ss_dssp SHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHh
Confidence 4556666666666666665
No 332
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=29.47 E-value=1.3e+02 Score=26.07 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=12.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH
Q 011692 291 KPQEAIPYCQKAISVCKSRVQRL 313 (479)
Q Consensus 291 ~~eeAi~~~ekAL~I~k~rl~~l 313 (479)
.+++|+.+|++=++.++.++..+
T Consensus 95 ~~~eA~~~l~~ri~~l~~~l~~l 117 (151)
T 2zdi_C 95 SIDEAISFLEKRLKEYDEAIKKT 117 (151)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677766655444444444443
No 333
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=29.40 E-value=76 Score=25.71 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=25.8
Q ss_pred hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 011692 60 EKTVEFADELMEKGTNALKESDYGEAAECFSR 91 (479)
Q Consensus 60 ~~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~ 91 (479)
...++.|..++.-|+-++..||+..|..|++=
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isY 60 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVW 60 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 35678899999999999999998888766543
No 334
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=28.47 E-value=99 Score=27.58 Aligned_cols=75 Identities=12% Similarity=0.075 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCC
Q 011692 212 AWKMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSK 291 (479)
Q Consensus 212 Awe~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~ 291 (479)
+...|..|+....+.....+.+..++..|..++....+...-+..|... +..+..++..+.-+|...+....+
T Consensus 68 ~~~~L~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~-------le~DP~rL~~ie~RL~~l~~L~RK 140 (175)
T 4abx_A 68 AAGLIGEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEG-------SAADPEALDRVEARLSALSKLKNK 140 (175)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555444443434456666666666666665555555544433 233444577888888777766655
Q ss_pred hh
Q 011692 292 PQ 293 (479)
Q Consensus 292 ~e 293 (479)
|.
T Consensus 141 yg 142 (175)
T 4abx_A 141 YG 142 (175)
T ss_dssp HC
T ss_pred cC
Confidence 53
No 335
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=28.35 E-value=80 Score=25.58 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=27.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 011692 59 REKTVEFADELMEKGTNALKESDYGEAAECFSRAL 93 (479)
Q Consensus 59 ~~~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Al 93 (479)
....++.|..++.-|+-++..||+..|..|++=|-
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~ 66 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAH 66 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567789999999999999999888877765443
No 336
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=28.13 E-value=28 Score=23.25 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHhhHH
Q 011692 350 TDKEAEIETLSGLCG 364 (479)
Q Consensus 350 ~~~~~Eieelk~ll~ 364 (479)
+.++.|+.-|++|++
T Consensus 17 ~~le~EV~Rl~~ll~ 31 (33)
T 2wq1_A 17 YHNTNEIARNTKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 456667777776664
No 337
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=28.07 E-value=5e+02 Score=26.50 Aligned_cols=98 Identities=12% Similarity=0.083 Sum_probs=57.3
Q ss_pred cChHHHHHHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 011692 206 ESDLDLAWKMLDVARAIAEKHWGD-SMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICL 284 (479)
Q Consensus 206 ~~dle~Awe~Le~Ar~Iyek~~~~-~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ 284 (479)
..+|....+.|..-+.-|.+.-.. +..+-.++..|........+++..+..|-.-|+-+..++... |
T Consensus 62 er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~---V--------- 129 (390)
T 1deq_A 62 DQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRK---V--------- 129 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHH---H---------
Confidence 367777777776666666554321 233556777888888888888888887777766655443110 0
Q ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011692 285 CLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVKSL 320 (479)
Q Consensus 285 ay~~~g~~eeAi~~~ekAL~I~k~rl~~l~~~l~~~ 320 (479)
..++. -|..++.-|+-+...|++|+..|+-.
T Consensus 130 ----~~q~~-~ir~Lq~~l~~q~~kiqRLE~~Id~c 160 (390)
T 1deq_A 130 ----IEQVQ-RINLLQKNVRDQLVDMKRLEVDIDIK 160 (390)
T ss_pred ----HHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111 34455555555566666666666433
No 338
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=26.66 E-value=1.5e+02 Score=29.79 Aligned_cols=63 Identities=16% Similarity=0.277 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc----C---CC-ChhHHHHHHHHHHHHH
Q 011692 216 LDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMV----E---PD-SRHIAELNFRICLCLE 287 (479)
Q Consensus 216 Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ll----g---~d-~r~iAea~~~LG~ay~ 287 (479)
||++-++| .++-+|..+|.-.... ....|+.+|++|--++..+. + +| ++.+..++.+|.++..
T Consensus 120 fE~a~vLf--------Nlaal~s~~A~~~~r~-~lk~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQA 190 (392)
T 1zb1_A 120 FEKSCTLF--------NIAVIFTQIARENINE-DYKNSIANLTKAFSCFEYLSENFLNSPSVDLQSENTRFLANICHAEA 190 (392)
T ss_dssp HHHHHHHH--------HHHHHHHHHHHHTTTS-SSHHHHHHHHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--------HHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 45566665 2556666777654444 79999999999988877542 2 12 6667777777776653
No 339
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=26.63 E-value=1.2e+02 Score=25.84 Aligned_cols=37 Identities=22% Similarity=0.189 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVS 98 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~ 98 (479)
-+.+|..-+..+..++..|.|+.|+-..++|++...+
T Consensus 12 ~~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~EkalK 48 (135)
T 1o3u_A 12 HMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVK 48 (135)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 4677888899999999999999999999999997543
No 340
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=26.55 E-value=95 Score=22.75 Aligned_cols=29 Identities=7% Similarity=0.040 Sum_probs=21.8
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHHHHh
Q 011692 348 LLTDKEAEIETLSGLCGDLEKKLEDLQQV 376 (479)
Q Consensus 348 ~~~~~~~Eieelk~ll~dl~~KieDlk~~ 376 (479)
....++.|+.+|+.=+..|..++++|+.-
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677888888888888888888887753
No 341
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=25.88 E-value=60 Score=29.87 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 274 HIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 274 ~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
+.+.=+|.+|..+...++|.+|-.++..|+.-+
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~ 44 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 44 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHC
Confidence 456778999999999999999999999999864
No 342
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=25.68 E-value=1.3e+02 Score=24.84 Aligned_cols=38 Identities=18% Similarity=0.074 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRVS 98 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~ 98 (479)
.-+..|..-+..+...+..|.|+.|+-..++|++...+
T Consensus 6 ~wl~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek~lK 43 (122)
T 1wol_A 6 DWIKQAERDLEEARYAKSGGYYELACFLSQQCAEKAVK 43 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 34677888889999999999999999999999997644
No 343
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=25.48 E-value=1.3e+02 Score=32.63 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHHHHHHHHHHHhhhhc
Q 011692 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQE 124 (479)
Q Consensus 66 A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~y~~YG~ALl~~ar~ 124 (479)
++.++.+|+.++..|+|.-|+++...++.. .|++..+......+|-++|..
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~--------~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFA--------EPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHHHHHh
Confidence 678999999999999999999999998887 789999999999999998754
No 344
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=25.46 E-value=1.4e+02 Score=22.00 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRV 97 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~ 97 (479)
..+..|..+-.-+...+.-.|+.-|++.+.+||+++.
T Consensus 15 ~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 15 SKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 3456788888888888999999999999999999874
No 345
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=25.29 E-value=1.2e+02 Score=26.10 Aligned_cols=44 Identities=18% Similarity=0.147 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHcCCH-HHH---HHHHHHHHHHHHHhhCCCChh
Q 011692 63 VEFADELMEKGTNALKESDY-GEA---AECFSRALEIRVSHYGELALE 106 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdy-eeA---ve~ys~Alei~~~~~Ge~~pe 106 (479)
.+.+...+.+++.++..||| +++ .....+|..|..++-.-...+
T Consensus 26 ydgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~~sLd~e 73 (130)
T 1orj_A 26 YDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLDHE 73 (130)
T ss_dssp HHHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 34578888899999999999 999 899999999998876554433
No 346
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=25.23 E-value=2.7e+02 Score=29.21 Aligned_cols=25 Identities=20% Similarity=0.399 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHh
Q 011692 352 KEAEIETLSGLCGDLEKKLEDLQQV 376 (479)
Q Consensus 352 ~~~Eieelk~ll~dl~~KieDlk~~ 376 (479)
....|..|+.++..|..||..|+..
T Consensus 166 ~~~~i~~L~~~~~~l~~ki~~l~~~ 190 (464)
T 1m1j_B 166 IPSSLRVLRAVIDSLHKKIQKLENA 190 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457777788888888888887765
No 347
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=24.39 E-value=86 Score=32.30 Aligned_cols=30 Identities=13% Similarity=-0.054 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 275 IAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 275 iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
-.-++.-|+.+|.+.++|++|+.++++.|.
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~ 225 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIID 225 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 456777899999999999999998888775
No 348
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=24.24 E-value=48 Score=22.11 Aligned_cols=16 Identities=13% Similarity=0.225 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHhhHHH
Q 011692 350 TDKEAEIETLSGLCGD 365 (479)
Q Consensus 350 ~~~~~Eieelk~ll~d 365 (479)
..++.|+.-|++||++
T Consensus 17 ~~Le~EV~RLk~lL~~ 32 (33)
T 3c3g_A 17 YHXENXLARIKXLLXE 32 (33)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHcc
Confidence 5677788888887753
No 349
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=24.15 E-value=1.6e+02 Score=23.68 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhhcCChhH
Q 011692 350 TDKEAEIETLSGLCGDLEKKLEDLQQVALFPKSI 383 (479)
Q Consensus 350 ~~~~~Eieelk~ll~dl~~KieDlk~~~~~p~s~ 383 (479)
.+++.+|+|-+.|+..|.+.|.|..+- .||..|
T Consensus 25 ~~lrq~I~DKQ~~i~~Lt~eLq~A~~e-aNpaeI 57 (90)
T 4b6x_A 25 AALRQEIEDKQLMVNNLTDELQDAIDE-ANPAEI 57 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-cCHHHH
Confidence 678899999999999999999998763 356655
No 350
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=23.92 E-value=1.3e+02 Score=22.14 Aligned_cols=34 Identities=32% Similarity=0.439 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALEREDIETSLSDYQKALTILER 266 (479)
Q Consensus 233 ~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~ 266 (479)
.|+=|...+.-.+.-++...|+..+++||+++..
T Consensus 19 ~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~~ 52 (53)
T 2rkl_A 19 QIQKLAKYAISALNYEDLPTAKDELTKALDLLNS 52 (53)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhc
Confidence 4666788888889999999999999999998753
No 351
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=23.57 E-value=3.3e+02 Score=22.83 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=18.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhc
Q 011692 353 EAEIETLSGLCGDLEKKLEDLQQVAL 378 (479)
Q Consensus 353 ~~Eieelk~ll~dl~~KieDlk~~~~ 378 (479)
+.-+..=+..+.-|+.||.+||.++.
T Consensus 74 K~tl~~R~~~Vsalq~KiaeLKrqLA 99 (107)
T 2k48_A 74 KSTLQNRRAAVSTLETKLGELKRQLA 99 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566777778888888887644
No 352
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=23.52 E-value=3.1e+02 Score=22.59 Aligned_cols=29 Identities=14% Similarity=0.199 Sum_probs=20.0
Q ss_pred hhhHHHHHHHHHHhhHH--------HHHHHHHHHHHh
Q 011692 348 LLTDKEAEIETLSGLCG--------DLEKKLEDLQQV 376 (479)
Q Consensus 348 ~~~~~~~Eieelk~ll~--------dl~~KieDlk~~ 376 (479)
....++..|.+|+..|. +|+.|+++|++.
T Consensus 47 ek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~ 83 (120)
T 2p32_A 47 DKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGL 83 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHH
Confidence 34567777888876664 467777777765
No 353
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=23.48 E-value=1.5e+02 Score=25.75 Aligned_cols=23 Identities=22% Similarity=0.263 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 011692 298 YCQKAISVCKSRVQRLLNEVKSL 320 (479)
Q Consensus 298 ~~ekAL~I~k~rl~~l~~~l~~~ 320 (479)
-+..|+++++.|+..|+..++.+
T Consensus 95 ~~~eA~~~l~~ri~~l~~~l~~l 117 (151)
T 2zdi_C 95 SIDEAISFLEKRLKEYDEAIKKT 117 (151)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999887665533
No 354
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=23.18 E-value=76 Score=25.62 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=37.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 011692 237 LSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLN 315 (479)
Q Consensus 237 ~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~~l~~ 315 (479)
+..+-.+......+..-+..+..++.=...+ +++. .+|+.+|-+|... ..++|+...++-++.+..+|..|+.
T Consensus 14 q~~~~~l~~q~~~l~~~~~e~~~~~~EL~~l-~~d~----~vy~~iG~vfv~~-~~~e~~~~L~~~~e~i~~~i~~le~ 86 (107)
T 1fxk_A 14 QQQAQAISVQKQTVEMQINETQKALEELSRA-ADDA----EVYKSSGNILIRV-AKDELTEELQEKLETLQLREKTIER 86 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTC----CEEEEETTEEEEE-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCc----hHHHHHhHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444455555555444433 2222 3566677665444 4567777666665555555555443
No 355
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=23.07 E-value=1.3e+02 Score=24.77 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIRV 97 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~ 97 (479)
.-+.+|..-+..+...+..|.|+.|+-..++|++...
T Consensus 6 ~w~~~A~~~L~~A~~~~~~g~y~~a~f~a~qa~Ek~l 42 (127)
T 1ufb_A 6 DWLEQARHNLRHAQGSLGLGDYAWACFAAQQAAEAAL 42 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 3467788888899999999999999999999999754
No 356
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=23.04 E-value=2.4e+02 Score=28.85 Aligned_cols=74 Identities=11% Similarity=0.120 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH------hcCCCC-----------------------------hhHHHHH
Q 011692 235 DILSALAEVALEREDIETSLSDYQKALTILER------MVEPDS-----------------------------RHIAELN 279 (479)
Q Consensus 235 ~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~------llg~d~-----------------------------r~iAea~ 279 (479)
.-+..|++.+.+.++|.+|.-++-.+..+.-. +++-+. ..+-+.+
T Consensus 12 ~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll 91 (428)
T 2wm9_A 12 TWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELL 91 (428)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHHH
Confidence 34568899999999999998888755554333 222111 1122244
Q ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 011692 280 FRICLCLEIGSKPQEAIPYCQKAISVCKS 308 (479)
Q Consensus 280 ~~LG~ay~~~g~~eeAi~~~ekAL~I~k~ 308 (479)
......+...+.|+.|+..|+..+.+++.
T Consensus 92 ~~ai~~f~kg~~~E~ai~~~k~L~~~ye~ 120 (428)
T 2wm9_A 92 EQCADGLWKAERYELIADIYKLIIPIYEK 120 (428)
T ss_dssp HHHHHHHHHTTCGGGHHHHHTTTHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 44455556666777788777777766664
No 357
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=22.87 E-value=1e+02 Score=32.08 Aligned_cols=71 Identities=10% Similarity=0.107 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC----CChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH-HH
Q 011692 235 DILSALAEVALEREDIETSLSDYQKALTILERMVEP----DSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISV-CK 307 (479)
Q Consensus 235 ~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~----d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I-~k 307 (479)
-.-+.|=.+|+..++..-+-..++ +++-. ..+++ .-.+.+.=+|.+|..|...++|.+|.+++..|+.. +.
T Consensus 177 ~l~n~L~kiYFkl~~~~lckni~k-~i~~~-~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp 252 (455)
T 3t5v_B 177 YLVNKLNNIYFRIESPQLCSNIFK-NFQPK-SMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLN 252 (455)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHH-THHHH-CCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHH-HhccC-CCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCC
Confidence 344566689999999988877774 44433 12111 12357788999999999999999999999999998 54
No 358
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=22.86 E-value=80 Score=27.42 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 011692 63 VEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (479)
Q Consensus 63 l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~ 99 (479)
++.|..|+..|.-++..||+.+|.+.|=.|++-..+.
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAaeeaiKA 40 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEAIKL 40 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 4568889999999999999999999999988865553
No 359
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=22.52 E-value=7.2e+02 Score=26.48 Aligned_cols=12 Identities=33% Similarity=0.471 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHH
Q 011692 364 GDLEKKLEDLQQ 375 (479)
Q Consensus 364 ~dl~~KieDlk~ 375 (479)
.+||+.|+.+..
T Consensus 179 ~~~QKQLeQv~a 190 (562)
T 3ghg_A 179 EDQQKQLEQVIA 190 (562)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh
Confidence 345555655543
No 360
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=22.50 E-value=3.9e+02 Score=28.50 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=15.0
Q ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011692 287 EIGSKPQEAIPYCQKAISVCKSRVQRLLNEV 317 (479)
Q Consensus 287 ~~~g~~eeAi~~~ekAL~I~k~rl~~l~~~l 317 (479)
++..++++-|.+++.=|.-...+|..|++-|
T Consensus 110 E~S~ELRRrIqyLKekVdnQlsnIrvLQsnL 140 (562)
T 3ghg_A 110 RVSEDLRSRIEVLKRKVIEKVQHIQLLQKNV 140 (562)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333555555555555544445555554433
No 361
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=22.30 E-value=1.6e+02 Score=24.54 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~ 99 (479)
.|..+.-.+-.+.+.|||++|-+++.+|-+.+.+-
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~A 53 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGSCIAEA 53 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 36677777778889999999999999998875553
No 362
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=22.28 E-value=5.6e+02 Score=25.08 Aligned_cols=44 Identities=18% Similarity=-0.071 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhcC--CCChhHHHHHHHHHHHHHcCCChhHHHHHHH
Q 011692 254 LSDYQKALTILERMVE--PDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 300 (479)
Q Consensus 254 l~dy~kAL~I~~~llg--~d~r~iAea~~~LG~ay~~~g~~eeAi~~~e 300 (479)
....++|++.-.+.-+ ..|| +.|.-||..|...+++.+|..||-
T Consensus 113 ~~fi~~ai~WS~~~g~~~~Gdp---~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 113 KDVITGMNNWSIKFSEYKFGDP---YLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHHTSSCTTCCH---HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCH---HHHHHHHHHHhhcCCHHHHHHHHH
Confidence 4566777777776633 2354 779999999999999999999984
No 363
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=22.05 E-value=56 Score=21.90 Aligned_cols=15 Identities=20% Similarity=0.164 Sum_probs=10.7
Q ss_pred hHHHHHHHHHHhhHH
Q 011692 350 TDKEAEIETLSGLCG 364 (479)
Q Consensus 350 ~~~~~Eieelk~ll~ 364 (479)
..++.|+.-|++||+
T Consensus 18 ~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 18 YHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHh
Confidence 566777777777765
No 364
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=22.02 E-value=87 Score=21.28 Aligned_cols=16 Identities=6% Similarity=0.046 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHhhHHH
Q 011692 350 TDKEAEIETLSGLCGD 365 (479)
Q Consensus 350 ~~~~~Eieelk~ll~d 365 (479)
..++.|+.-|++|+++
T Consensus 18 ~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 18 WHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc
Confidence 3445555555555543
No 365
>2hsb_A Hypothetical UPF0332 protein AF0298; DUF103 family, structural genomics, joint center for structu genomics, JCSG; HET: MSE PG4; 1.95A {Archaeoglobus fulgidus}
Probab=22.00 E-value=1.7e+02 Score=23.88 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=31.4
Q ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 011692 61 KTVEFADELMEKGTNALKESDYGEAAECFSRALEIR 96 (479)
Q Consensus 61 ~~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~ 96 (479)
.-+.+|...+..+...+..|+|..|+....+|+...
T Consensus 7 ~~l~~A~~~L~~A~~~~~~g~y~~a~~~ay~a~~~a 42 (126)
T 2hsb_A 7 LRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHA 42 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 457789999999999999999999999888888764
No 366
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=21.90 E-value=1.7e+02 Score=24.35 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~ 99 (479)
.|..+.-.+-.+.+.|||++|-+++.+|-+.+.+-
T Consensus 17 ~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~A 51 (103)
T 1wcr_A 17 QARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEA 51 (103)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 46777777888889999999999999998875553
No 367
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=21.66 E-value=6.2e+02 Score=28.97 Aligned_cols=60 Identities=15% Similarity=0.102 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcC
Q 011692 214 KMLDVARAIAEKHWGDSMEKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIG 289 (479)
Q Consensus 214 e~Le~Ar~Iyek~~~~~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~ 289 (479)
++|+.+..||.+... + -|..+-.+.+.+++.+.+...|.+++. .+++ ...|+|++-+...
T Consensus 216 ~vLr~l~~Iy~k~~~--~----dy~~a~~~ai~LnD~~li~~if~~l~~-------~~d~---l~ayQiAFdL~~~ 275 (963)
T 4ady_A 216 SILRKSFDFLMNMPN--C----DYLTLNKVVVNLNDAGLALQLFKKLKE-------ENDE---GLSAQIAFDLVSS 275 (963)
T ss_dssp HHHHHHHHHHHHSSS--C----CHHHHHHHHHHHTCHHHHHHHHHHHHT-------TCCH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCc--h----hHHHHHHHHHHcCCHHHHHHHHHHHHh-------cccH---HHHHHHHHHHhcc
Confidence 579999999998742 1 255666777888899999988888763 2333 3446777766543
No 368
>3f6n_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding, D binding protein; 3.10A {Cauliflower mosaic virus}
Probab=21.46 E-value=1e+02 Score=26.60 Aligned_cols=23 Identities=4% Similarity=0.170 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Q 011692 351 DKEAEIETLSGLCGDLEKKLEDL 373 (479)
Q Consensus 351 ~~~~Eieelk~ll~dl~~KieDl 373 (479)
++..+|+++..++.+|...|..+
T Consensus 6 ~i~~ei~e~~~~i~~l~~~Ik~i 28 (129)
T 3f6n_A 6 QIQKEVSEILSDQKSMKADIKAI 28 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666655555555555543
No 369
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=21.14 E-value=3.2e+02 Score=21.76 Aligned_cols=28 Identities=18% Similarity=0.404 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhh
Q 011692 350 TDKEAEIETLSGLCGDLEKKLEDLQQVA 377 (479)
Q Consensus 350 ~~~~~Eieelk~ll~dl~~KieDlk~~~ 377 (479)
..++.||..|++.+.++.-.|+.+++-.
T Consensus 30 ~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQ 57 (83)
T 2xdj_A 30 SDNQSDIDSLRGQIQENQYQLNQVVERQ 57 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3567788888888888888888887753
No 370
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=21.12 E-value=1.3e+02 Score=31.20 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~ 99 (479)
.+.++..++.+|...+..||++.|..++++|..+..+.
T Consensus 378 ~~~~~a~~~~~a~~~~~~gd~~~A~~~L~~A~~~~~~~ 415 (464)
T 4fx5_A 378 GQAEMAAAIQEGLDAQAAGDLDTATARLGRAMDLAVES 415 (464)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 34568888999999999999999999999999997664
No 371
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=20.95 E-value=1e+02 Score=27.69 Aligned_cols=30 Identities=17% Similarity=0.075 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHH
Q 011692 275 IAELNFRICLCLEIGSKPQEAIPYCQKAIS 304 (479)
Q Consensus 275 iAea~~~LG~ay~~~g~~eeAi~~~ekAL~ 304 (479)
-++.+++|+.+|...|+..+|-+.+.+|.+
T Consensus 124 ~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 124 SASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 378899999999999999999988888764
No 372
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=20.88 E-value=2.6e+02 Score=27.91 Aligned_cols=49 Identities=22% Similarity=0.184 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhCCCChhHHHH
Q 011692 62 TVEFADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNA 110 (479)
Q Consensus 62 ~l~~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~~Ge~~pe~A~~ 110 (479)
++......+..|.+++..|+|.+|+.+|...|-...=.-=+...+..++
T Consensus 110 ~l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~ 158 (325)
T 3mv2_A 110 GLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLA 158 (325)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHH
Confidence 4555666788999999999999999999999987643322333444444
No 373
>2pjw_V Vacuolar protein sorting-associated protein 27; GAT domain, core complex, doamin SWAP, endocytosis/exocytosis complex; 3.01A {Saccharomyces cerevisiae}
Probab=20.85 E-value=1.8e+02 Score=23.64 Aligned_cols=54 Identities=9% Similarity=0.063 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Q 011692 249 DIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVC 306 (479)
Q Consensus 249 ~yeeAl~dy~kAL~I~~~llg~d~r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~ 306 (479)
+.++--..|.++..++.++. +.+-....+......+..++..|...|.+-|+-.
T Consensus 31 ~d~~LqeLy~kv~~lRPKL~----r~l~~~~~K~~~L~~mn~Kls~a~rlYD~lLE~~ 84 (91)
T 2pjw_V 31 EDSKLQNLAQRVFASKARLN----YALNDKAQKYNTLIEMNGKISEIMNIYDRLLEQQ 84 (91)
T ss_dssp TTTHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667788999999999984 7788888888888888889999999998866543
No 374
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.80 E-value=65 Score=33.40 Aligned_cols=28 Identities=14% Similarity=-0.072 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 011692 276 AELNFRICLCLEIGSKPQEAIPYCQKAI 303 (479)
Q Consensus 276 Aea~~~LG~ay~~~g~~eeAi~~~ekAL 303 (479)
.-++.-|+.+|...++|++|+.++++.|
T Consensus 180 ~aA~allarvyL~~~~~~~A~~~a~~vi 207 (481)
T 3jq1_A 180 GAAYAALGKIYVYEENWQEAINVLEPLT 207 (481)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3456668999999999999988876654
No 375
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=20.42 E-value=3.3e+02 Score=27.37 Aligned_cols=89 Identities=19% Similarity=0.227 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCccccccccccccccccchhhhHHHHHHHHHHhhHHHHHHHHHHH
Q 011692 294 EAIPYCQKAISVCKSRVQRLLNEVKSLGESATSSAPAELDDGIQQSSSEFQNDKLLTDKEAEIETLSGLCGDLEKKLEDL 373 (479)
Q Consensus 294 eAi~~~ekAL~I~k~rl~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~Eieelk~ll~dl~~KieDl 373 (479)
.-..+|+.-+.=-+.+++.|+..|..+.+.++-.+.. .+.... .+ .......+++-|+..|.+++.-|.|.
T Consensus 240 ~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~--~~~~a~----~~---~~~~~~~~~~~l~~al~~~~~gi~~~ 310 (365)
T 3fse_A 240 EAKALFQEMITNKQRHIEYLETYLTRLGEKPSLSANI--ANQYAK----VK---TALTGSDDIYQIRSALGDIQTGIGDI 310 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcch--hHHHHH----HH---HHhcCCChHHHHHHHhcchhhhHHHH
Confidence 4556788888888889999999999987754422211 110100 01 11112457788999999999999998
Q ss_pred HHh---hcCChhH--HHHHHHhh
Q 011692 374 QQV---ALFPKSI--LSEILGMA 391 (479)
Q Consensus 374 k~~---~~~p~s~--~~e~~~~~ 391 (479)
.++ ..+|.+. +.+|+..+
T Consensus 311 ~~l~~~~~dp~~~~i~~~i~~~l 333 (365)
T 3fse_A 311 GNLCAMYTDPIATAIFKEIYKDL 333 (365)
T ss_dssp HHHTTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHH
Confidence 876 4566643 45554443
No 376
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=20.21 E-value=1e+02 Score=26.76 Aligned_cols=44 Identities=14% Similarity=0.099 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHhhcCChhHHHHHHHhhhh
Q 011692 350 TDKEAEIETLSGLCGDLEKKLEDLQQVALFPKSILSEILGMASA 393 (479)
Q Consensus 350 ~~~~~Eieelk~ll~dl~~KieDlk~~~~~p~s~~~e~~~~~~~ 393 (479)
..++.+|++|+.++..|+.+|..++.......++...+++.++.
T Consensus 90 ~~L~~~i~~l~~~l~~l~~~i~~~~~~~~~~~~~~~~Li~~~~~ 133 (146)
T 3hh0_A 90 EVLLAEQERIAKVLSHMDEMTKKFQKEERVNVALFSSFLQTFIW 133 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHH
Confidence 35677899999999999999998887766566777788887765
No 377
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=20.19 E-value=22 Score=34.59 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Q 011692 273 RHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQ 311 (479)
Q Consensus 273 r~iAea~~~LG~ay~~~g~~eeAi~~~ekAL~I~k~rl~ 311 (479)
..-|..+.+.|+-+...|+|.+|+.+|+.||+++...+.
T Consensus 20 ~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk 58 (257)
T 2ymb_A 20 STAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLK 58 (257)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 335666777788888899999999999999988765443
No 378
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=20.17 E-value=4.4e+02 Score=23.02 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChhH
Q 011692 232 EKVDILSALAEVALEREDIETSLSDYQKALTILERMVEPDSRHI 275 (479)
Q Consensus 232 ~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I~~~llg~d~r~i 275 (479)
+.|..+...|.+|...||+++|-..|-+-+.|...+ +.||..
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdy 81 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDF 81 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcch
Confidence 456677788999999999999999999999998544 466654
No 379
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=20.15 E-value=2.7e+02 Score=22.57 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHH
Q 011692 233 KVDILSALAEVALER---EDIETSLSDYQKALTILER 266 (479)
Q Consensus 233 ~A~v~~~LGev~le~---g~yeeAl~dy~kAL~I~~~ 266 (479)
.|-.|.+-|...-+. |+-++|+.+|++.+.-+.+
T Consensus 15 ~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~ 51 (89)
T 3eab_A 15 QAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEK 51 (89)
T ss_dssp HHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHh
Confidence 344555666666666 6677777777766655444
No 380
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=20.05 E-value=1.9e+02 Score=24.29 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 011692 65 FADELMEKGTNALKESDYGEAAECFSRALEIRVSH 99 (479)
Q Consensus 65 ~A~~L~~~G~~~~~~gdyeeAve~ys~Alei~~~~ 99 (479)
.|..+.-.+-.+.+.|||++|-+++.+|-+-+.+-
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l~~A 55 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKEAINEA 55 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 46777777878889999999999999998765543
No 381
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.01 E-value=4.3e+02 Score=26.91 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=29.4
Q ss_pred cchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 011692 230 SMEKVDILSALAEVALEREDIETSLSDYQKALTI 263 (479)
Q Consensus 230 ~~~~A~v~~~LGev~le~g~yeeAl~dy~kAL~I 263 (479)
++...-++..|+.||+-.++|++|+...++++..
T Consensus 193 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 193 LFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 3446678999999999999999999999998864
Done!