BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011694
(479 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 161/261 (61%), Gaps = 6/261 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +G LG G F KV T VAVK++++ KI + + +IKREI +++ RHP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V++T + F VMEY GGELF+ + K G+++E ARR FQQ+++AVD+CH V
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L T+CG+P Y APEVI+ + Y
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMS----DGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VDIWSCGV+L+ LL G LPF D ++ +++KI F P + V LL +L
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 254 NPSTRISMAKIRESSWFRKGM 274
+P R ++ IRE WF++ +
Sbjct: 249 DPLKRATIKDIREHEWFKQDL 269
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 160/261 (61%), Gaps = 6/261 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +G LG G F KV + T VAVK++++ KI + + +I+REI +++ RHP+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V++T S IF VMEY GGELF+ + K G+L E +RR FQQ+++ VD+CH V
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L +CG+P Y APEVI+ + Y
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS----DGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VDIWS GV+L+ LL G LPF D ++ +++KI F P + P V LL +L
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQV 253
Query: 254 NPSTRISMAKIRESSWFRKGM 274
+P R ++ IRE WF++ +
Sbjct: 254 DPMKRATIKDIREHEWFKQDL 274
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 160/261 (61%), Gaps = 6/261 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +G LG G F KV T VAVK++++ KI + + +IKREI +++ RHP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V++T + F VMEY GGELF+ + K G+++E ARR FQQ+++AVD+CH V
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L +CG+P Y APEVI+ + Y
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMS----DGEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VDIWSCGV+L+ LL G LPF D ++ +++KI F P + V LL +L
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 254 NPSTRISMAKIRESSWFRKGM 274
+P R ++ IRE WF++ +
Sbjct: 249 DPLKRATIKDIREHEWFKQDL 269
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y++ + LG+G+F KV A T Q VA+K+I+K + + + +I+REIS +R++RHP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V+ +K +I V+EYA G ELF+ V + K+ E ARR+FQQ+I+AV++CH +
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L T+CG+P Y APEVI+ K Y
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VD+WSCGV+L+V+L LPF D ++ +++ I + P + P L+ ++L
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 250
Query: 254 NPSTRISMAKIRESSWFR 271
NP RIS+ +I + WF+
Sbjct: 251 NPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y++ + LG+G+F KV A T Q VA+K+I+K + + + +I+REIS +R++RHP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V+ +K +I V+EYA G ELF+ V + K+ E ARR+FQQ+I+AV++CH +
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L T+CG+P Y APEVI+ K Y
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VD+WSCGV+L+V+L LPF D ++ +++ I + P + P L+ ++L
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
Query: 254 NPSTRISMAKIRESSWFR 271
NP RIS+ +I + WF+
Sbjct: 250 NPLNRISIHEIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y++ + LG+G+F KV A T Q VA+K+I+K + + + +I+REIS +R++RHP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V+ +K +I V+EYA G ELF+ V + K+ E ARR+FQQ+I+AV++CH +
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L T+CG+P Y APEVI+ K Y
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VD+WSCGV+L+V+L LPF D ++ +++ I + P + P L+ ++L
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
Query: 254 NPSTRISMAKIRESSWFR 271
NP RIS+ +I + WF+
Sbjct: 241 NPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y++ + LG+G+F KV A T Q VA+K+I+K + + + +I+REIS +R++RHP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V+ +K +I V+EYA G ELF+ V + K+ E ARR+FQQ+I+AV++CH +
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L T+CG+P Y APEVI+ K Y
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VD+WSCGV+L+V+L LPF D ++ +++ I + P + P L+ ++L
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 244
Query: 254 NPSTRISMAKIRESSWFR 271
NP RIS+ +I + WF+
Sbjct: 245 NPLNRISIHEIMQDDWFK 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 163/257 (63%), Gaps = 7/257 (2%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + LG+G+F KV A +T Q VA+K I + + + + +++REIS ++++RHP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
I++LY+V+ T + I V+EYA GGELF+ V K ++ ED RR+FQQ+I A+++CH +
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEVINRKGYD 193
HRD+KP KI+DFGLS + DG L T+CG+P Y APEVIN K Y
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDP 253
G +VD+WSCG+VL+V+L G LPF D + +++K+ + P++ P + L+ +++
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVA 245
Query: 254 NPSTRISMAKIRESSWF 270
+P RI++ +IR WF
Sbjct: 246 DPMQRITIQEIRRDPWF 262
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 207 bits (527), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 172/301 (57%), Gaps = 5/301 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VA+K+IDK ++ L ++ RE+ +M+I+ HPN
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLFREVRIMKILNHPN 72
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ +MEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 132
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S G L T CG+P Y APE+ K YDG
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTV---GGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL + L N
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 249
Query: 255 PSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGASAPQGSSSIAAEIKQELGQ 314
P R ++ +I + W G + + + E + S G EI++ L +
Sbjct: 250 PIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMVGMGYSQEEIQESLSK 309
Query: 315 L 315
+
Sbjct: 310 M 310
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 160/259 (61%), Gaps = 5/259 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VAVK+IDK ++ L ++ RE+ +M+++ HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPN 74
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ VMEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L T CG+P Y APE+ K YDG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDG 191
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K L N
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 255 PSTRISMAKIRESSWFRKG 273
PS R ++ +I + W G
Sbjct: 252 PSKRGTLEQIMKDRWMNVG 270
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 160/259 (61%), Gaps = 5/259 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VAVK+IDK ++ L ++ RE+ +M+++ HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPN 74
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ VMEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L T CG+P Y APE+ K YDG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDG 191
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K L N
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 255 PSTRISMAKIRESSWFRKG 273
PS R ++ +I + W G
Sbjct: 252 PSKRGTLEQIMKDRWMNVG 270
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 160/259 (61%), Gaps = 5/259 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VAV++IDK ++ L ++ RE+ +M+++ HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL-QKLFREVRIMKVLNHPN 74
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ VMEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L T CG+P Y APE+ K YDG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDG 191
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K L N
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 255 PSTRISMAKIRESSWFRKG 273
PS R ++ +I + W G
Sbjct: 252 PSKRGTLEQIMKDRWMNVG 270
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 170/301 (56%), Gaps = 5/301 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VA+K+IDK ++ L ++ RE+ +M+I+ HPN
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLFREVRIMKILNHPN 75
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ +MEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S G L CG P Y APE+ K YDG
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTV---GGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL + L N
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 252
Query: 255 PSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGASAPQGSSSIAAEIKQELGQ 314
P R ++ +I + W G + + + E + S G EI++ L +
Sbjct: 253 PIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMVGMGYSQEEIQESLSK 312
Query: 315 L 315
+
Sbjct: 313 M 313
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 159/259 (61%), Gaps = 5/259 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VAVK+IDK ++ L ++ RE+ +M+++ HPN
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPN 67
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ VMEYA GGE+F+ VA G +KE AR F+Q+++AV +CH + +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L T CG+P Y APE+ K YDG
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDG 184
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K L N
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 244
Query: 255 PSTRISMAKIRESSWFRKG 273
PS R ++ +I + W G
Sbjct: 245 PSKRGTLEQIMKDRWMNVG 263
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 158/259 (61%), Gaps = 5/259 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VAVK+IDK ++ L ++ RE+ +M+++ HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPN 74
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ VMEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L CG P Y APE+ K YDG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYDG 191
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K L N
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 255 PSTRISMAKIRESSWFRKG 273
PS R ++ +I + W G
Sbjct: 252 PSKRGTLEQIMKDRWMNVG 270
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 159/265 (60%), Gaps = 4/265 (1%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
L + YE+ +G G FAKV A I T + VA+K++DK+ + +IK EI ++ +
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD--LPRIKTEIEALKNL 65
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKV-AKGKLKEDAARRYFQQLINAVDFCH 130
RH +I QLY V+ T +KIF V+EY GGELF+ + ++ +L E+ R F+Q+++AV + H
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
S+G HRD+KP K+ DFGL A + ++D L T CG+ AY APE+I K
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK-GNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
Y G + D+WS G++L+VL+ G+LPF D N++ +Y+KI + ++ P W P LL ++
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQM 244
Query: 251 LDPNPSTRISMAKIRESSWFRKGMN 275
L +P RISM + W + N
Sbjct: 245 LQVDPKKRISMKNLLNHPWIMQDYN 269
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 159/259 (61%), Gaps = 5/259 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VAV++IDK ++ L ++ RE+ +M+++ HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL-QKLFREVRIMKVLNHPN 74
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ VMEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L CG+P Y APE+ K YDG
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDG 191
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K L N
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 255 PSTRISMAKIRESSWFRKG 273
PS R ++ +I + W G
Sbjct: 252 PSKRGTLEQIMKDRWMNVG 270
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 166/270 (61%), Gaps = 5/270 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR + T + VAVK+IDK ++ L ++ RE+ +M+I+ HPN
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KLFREVRIMKILNHPN 75
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ VMEYA GGE+F+ VA G++KE AR F+Q+++AV +CH + +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L T CG+P Y APE+ K YDG
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK---LDTFCGSPPYAAPELFQGKKYDG 192
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K+L N
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVLN 252
Query: 255 PSTRISMAKIRESSWFRKGMNQKQKQKVTE 284
P R S+ +I + W G +++ + TE
Sbjct: 253 PIKRGSLEQIMKDRWMNVGHEEEELKPYTE 282
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 174/329 (52%), Gaps = 16/329 (4%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+++YE+ + +G G F R ++N+ VAVK I++ + + + +KREI R +R
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLR 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
HPNIV+ EV+ T + + VMEYA GGELF ++ G+ ED AR +FQQLI+ V +CH+
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 132 RGVYHRDIKPXXXXX--XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
V HRD+K KI DFG S + Q +T GTPAY+APEV+ +
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLK 189
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK----IGKAEFKCPNW--FPPEV 243
K YDG+ D+WSCGV L+V+L G PF D + +RK I ++ P++ PE
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 249
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGASAPQGSSS 303
R L+ +I +P+ RIS+ +IR WF K + T + A+ D + +
Sbjct: 250 RHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFAASDQPGQSIEEIMQ 309
Query: 304 IAAEIKQELGQLPNLNAFDIISLSAGFDL 332
I AE NLN + SL D+
Sbjct: 310 IIAEATVPPAGTQNLNHYLTGSLDIDDDM 338
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 156/259 (60%), Gaps = 5/259 (1%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y + + +G+G FAKV AR I T + VAVK+IDK ++ L ++ RE+ + +++ HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIXKVLNHPN 74
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L+EV+ T+ ++ V EYA GGE+F+ VA G+ KE AR F+Q+++AV +CH + +
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+K KI+DFG S ++ L CG P Y APE+ K YDG
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYDG 191
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPN 254
+VD+WS GV+L+ L++G LPF NL E+ ++ + +++ P + + LL K L N
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLILN 251
Query: 255 PSTRISMAKIRESSWFRKG 273
PS R ++ +I + W G
Sbjct: 252 PSKRGTLEQIXKDRWXNVG 270
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 172/329 (52%), Gaps = 16/329 (4%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+++YE+ + +G G F R ++N+ VAVK I++ + +A +KREI R +R
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIAANVKREIINHRSLR 73
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
HPNIV+ EV+ T + + VMEYA GGELF ++ G+ ED AR +FQQLI+ V +CH+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 132 RGVYHRDIKPXXXXX--XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
V HRD+K KI DFG S + Q +T GTPAY+APEV+ +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLK 190
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK----IGKAEFKCPNW--FPPEV 243
K YDG+ D+WSCGV L+V+L G PF D + +RK I ++ P++ PE
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGASAPQGSSS 303
R L+ +I +P+ RIS+ +IR WF K + T + D + +
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQ 310
Query: 304 IAAEIKQELGQLPNLNAFDIISLSAGFDL 332
I AE NLN + SL D+
Sbjct: 311 IIAEATVPPAGTQNLNHYLTGSLDIDDDM 339
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 171/329 (51%), Gaps = 16/329 (4%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+++YE+ + +G G F R ++N+ VAVK I++ + + + +KREI R +R
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLR 73
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
HPNIV+ EV+ T + + VMEYA GGELF ++ G+ ED AR +FQQLI+ V +CH+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 132 RGVYHRDIKPXXXXX--XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
V HRD+K KI FG S + Q +T GTPAY+APEV+ +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLK 190
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK----IGKAEFKCPNW--FPPEV 243
K YDG+ D+WSCGV L+V+L G PF D + +RK I ++ P++ PE
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGASAPQGSSS 303
R L+ +I +P+ RIS+ +IR WF K + T + D + +
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQ 310
Query: 304 IAAEIKQELGQLPNLNAFDIISLSAGFDL 332
I AE NLN + SL D+
Sbjct: 311 IIAEATVPPAGTQNLNHYLTGSLDIDDDM 339
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 173/333 (51%), Gaps = 24/333 (7%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+++YE+ + +G G F R ++N+ VAVK I++ + + + +KREI R +R
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLR 73
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
HPNIV+ EV+ T + + VMEYA GGELF ++ G+ ED AR +FQQLI+ V +CH+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 132 RGVYHRDIKPXXXXX--XXXXXXKISDFGLSALAQCKHQDGLLHT----TCGTPAYVAPE 185
V HRD+K KI FG S + +LH+ T GTPAY+APE
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYS-------KSSVLHSQPKDTVGTPAYIAPE 186
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK----IGKAEFKCPNW--F 239
V+ +K YDG+ D+WSCGV L+V+L G PF D + +RK I ++ P++
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHI 246
Query: 240 PPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGASAPQ 299
PE R L+ +I +P+ RIS+ +IR WF K + T + D + +
Sbjct: 247 SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSIE 306
Query: 300 GSSSIAAEIKQELGQLPNLNAFDIISLSAGFDL 332
I AE NLN + SL D+
Sbjct: 307 EIMQIIAEATVPPAGTQNLNHYLTGSLDIDDDM 339
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 154/271 (56%), Gaps = 16/271 (5%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+++YE+ + +G G F R + N+ VAVK I++ + + + +KREI R +R
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE----KIDENVKREIINHRSLR 73
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
HPNIV+ EV+ T + + VMEYA GGELF ++ G+ ED AR +FQQLI+ V + H+
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 132 RGVYHRDIKPXXXXX--XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
V HRD+K KI+DFG S + Q + GTPAY+APEV+ +
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP---KSAVGTPAYIAPEVLLK 190
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK----IGKAEFKCPNW--FPPEV 243
K YDG+ D+WSCGV L+V+L G PF D + +RK I ++ P++ PE
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGM 274
R L+ +I +P+ RIS+ +IR WF K +
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 148/259 (57%), Gaps = 6/259 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +++GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K + E Y +L NA+ +CHS+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A +D T CGT Y+ PE+I + +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMH 187
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF E YR+I + EF P++ R L+ ++L
Sbjct: 188 D-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLK 246
Query: 253 PNPSTRISMAKIRESSWFR 271
N S R+++A++ E W +
Sbjct: 247 HNASQRLTLAEVLEHPWIK 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 159/292 (54%), Gaps = 9/292 (3%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
M+ K E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQ 121
RE+ + +RHPNI++LY ++++ ++EYA GE++ ++ K K E Y +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
L NA+ +CHS+ V HRDIKP KI+DFG S A + T CGT Y
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDY 177
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPP 241
+ PE+I + +D EKVD+WS GV+ + L G PF + E Y++I + EF P++
Sbjct: 178 LPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 242 EVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
R L+ ++L NPS R + ++ E W K ++K++AS+ +
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 285
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 151/271 (55%), Gaps = 16/271 (5%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+++Y+ + +G G F R T + VAVK I++ + + ++REI R +R
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG----AAIDENVQREIINHRSLR 74
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
HPNIV+ EV+ T + + +MEYA GGEL+ ++ G+ ED AR +FQQL++ V +CHS
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 132 RGVYHRDIKPXXXXX--XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
+ HRD+K KI DFG S + Q +T GTPAY+APEV+ R
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLR 191
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK----IGKAEFKCPN--WFPPEV 243
+ YDG+ D+WSCGV L+V+L G PF D YRK I ++ P+ PE
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGM 274
L+ +I +P+TRIS+ +I+ SWF K +
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWFLKNL 282
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 156/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A +D L CGT Y+ PE+I + +
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYLPPEMIEGRMH 209
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 210 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 268
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 269 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 306
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 155/279 (55%), Gaps = 9/279 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A +D T CGT Y+ PE+I + +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMH 184
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 185 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQ 291
NPS R + ++ E W K ++K++AS+
Sbjct: 244 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASK 279
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 146/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A +D L CGT Y+ PE+I + +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYLPPEMIEGRMH 186
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 187 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 246 HNPSQRPMLREVLEHPW 262
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 147/259 (56%), Gaps = 6/259 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +++GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K + E Y +L NA+ +CHS+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE+I + +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 187
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF E YR+I + EF P++ R L+ ++L
Sbjct: 188 D-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLK 246
Query: 253 PNPSTRISMAKIRESSWFR 271
N S R+++A++ E W +
Sbjct: 247 HNASQRLTLAEVLEHPWIK 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 158/292 (54%), Gaps = 9/292 (3%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
M+ K E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQ 121
RE+ + +RHPNI++LY ++++ ++EYA G ++ ++ K K E Y +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
L NA+ +CHS+ V HRDIKP KI+DFG S A + T CGT Y
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDY 177
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPP 241
+ PE+I + +D EKVD+WS GV+ + L G PF + E Y++I + EF P++
Sbjct: 178 LPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 242 EVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
R L+ ++L NPS R + ++ E W K ++K++AS+ +
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 285
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 158/291 (54%), Gaps = 9/291 (3%)
Query: 4 MDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
M+ K E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQL 122
E+ + +RHPNI++LY ++++ ++EYA G ++ ++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
NA+ +CHS+ V HRDIKP KI+DFG S A + T CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE+I + +D EKVD+WS GV+ + L G PF + E Y++I + EF P++
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
R L+ ++L NPS R + ++ E W K ++K++AS+ +
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 283
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 152/277 (54%), Gaps = 6/277 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAA 289
NPS R + ++ E W ++ + ES AA
Sbjct: 243 HNPSQRPMLREVLEHPWITANSSKPSNCQNKESAAAA 279
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 144
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE+I + +
Sbjct: 145 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 200
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 201 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 259
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 260 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 297
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 154/281 (54%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE I + +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEXIEGRXH 188
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 189 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 248 HNPSQRPXLREVLEHPWI---TANSSKPSNCQNKESASKQS 285
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 156/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE+I + +
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 209
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 210 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 268
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W + K ++K++AS+ +
Sbjct: 269 HNPSQRPMLREVLEHPWITANSS---KPSNCQNKESASKQS 306
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 148/267 (55%), Gaps = 6/267 (2%)
Query: 4 MDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
M+ K E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQL 122
E+ + +RHPNI++LY ++++ ++EYA G ++ ++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
NA+ +CHS+ V HRDIKP KI+DFG S A + T CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE+I + +D EKVD+WS GV+ + L G PF + E Y++I + EF P++
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSW 269
R L+ ++L NPS R + ++ E W
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE+I + +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 243 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 280
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRMH 186
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 187 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 246 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 283
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL----CGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 243 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 280
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 145/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE+I + +
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 187
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 188 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 246
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 247 HNPSQRPMLREVLEHPW 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 148/267 (55%), Gaps = 6/267 (2%)
Query: 4 MDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
M+ K E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQL 122
E+ + +RHPNI++LY ++++ ++EYA G ++ ++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
NA+ +CHS+ V HRDIKP KI+DFG S A + L CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYL 176
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE+I + +D EKVD+WS GV+ + L G PF + E Y++I + EF P++
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSW 269
R L+ ++L NPS R + ++ E W
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 154/279 (55%), Gaps = 9/279 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPEMIEGRMH 188
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 189 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQ 291
NPS R + ++ E W K ++K++AS+
Sbjct: 248 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASK 283
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRMH 185
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 186 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 244
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 245 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 282
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 145/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE+I + +
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 182
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 183 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 241
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 242 HNPSQRPMLREVLEHPW 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 154/279 (55%), Gaps = 9/279 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPEMIEGRMH 184
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 185 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQ 291
NPS R + ++ E W K ++K++AS+
Sbjct: 244 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASK 279
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 158/292 (54%), Gaps = 9/292 (3%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
M+ K E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQ 121
RE+ + +RHPNI++LY ++++ ++EYA GE++ ++ K K E Y +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
L NA+ +CHS+ V HRDIKP KI+DFG S A + L GT Y
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GTLDY 177
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPP 241
+ PE+I + +D EKVD+WS GV+ + L G PF + E Y++I + EF P++
Sbjct: 178 LPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 242 EVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
R L+ ++L NPS R + ++ E W K ++K++AS+ +
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 285
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 145/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 145/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 145/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL----CGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 148/267 (55%), Gaps = 6/267 (2%)
Query: 4 MDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
M+ K E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQL 122
E+ + +RHPNI++LY ++++ ++EYA G ++ ++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
NA+ +CHS+ V HRDIKP KI++FG S A + T CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE+I + +D EKVD+WS GV+ + L G PF + E Y++I + EF P++
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSW 269
R L+ ++L NPS R + ++ E W
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 145/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 155/281 (55%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI++FG S A + T CGT Y+ PE+I + +
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 185
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 186 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 244
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K ++K++AS+ +
Sbjct: 245 HNPSQRPMLREVLEHPWI---TANSSKPSNCQNKESASKQS 282
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 144/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR + +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + T CGT Y+ PE+I + +
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 180
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 181 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 239
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 240 HNPSQRPMLREVLEHPW 256
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 144/257 (56%), Gaps = 6/257 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR + +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + L CGT Y+ PE+I + +
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRMH 183
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + + Y++I + EF P++ R L+ ++L
Sbjct: 184 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 253 PNPSTRISMAKIRESSW 269
NPS R + ++ E W
Sbjct: 243 HNPSQRPMLREVLEHPW 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 154/281 (54%), Gaps = 9/281 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+GR LG+G F VY AR ++ +A+KV+ K ++ + G+ Q++RE+ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI++LY ++++ ++EYA G ++ ++ K K E Y +L NA+ +CHS+
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S C T GT Y+ PE+I + +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+WS GV+ + L G PF + E Y++I + EF P++ R L+ ++L
Sbjct: 185 D-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 253 PNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
NPS R + ++ E W K +++K++AS+ +
Sbjct: 244 HNPSQRPMLREVLEHPWI---TANSSKPSNSQNKESASKQS 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 150/269 (55%), Gaps = 11/269 (4%)
Query: 9 PSVLT-----EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
P +LT + +E+GR LG+G F VY AR +++ VA+KV+ K +I + G+ Q++R
Sbjct: 13 PDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRR 72
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQL 122
EI + + HPNI++LY + +I+ ++EYA GEL+ ++ K E ++L
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL 132
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+A+ +CH + V HRDIKP KI+DFG S A + T CGT Y+
Sbjct: 133 ADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDYL 188
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE+I + ++ EKVD+W GV+ + LL G PF ++ E YR+I K + K P P
Sbjct: 189 PPEMIEGRMHN-EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTG 247
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFR 271
+ L+ K+L NPS R+ +A++ W R
Sbjct: 248 AQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 152/271 (56%), Gaps = 7/271 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++VG LLG+G+FA VY A SI T VA+K+IDK + + G+ +++ E+ + ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLK---EDAARRYFQQLINAVDFCH 130
P+I++LY + ++ V+E GE+ N+ K ++K E+ AR + Q+I + + H
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
S G+ HRD+ KI+DFGL+ + H+ +T CGTP Y++PE+ R
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH--YTLCGTPNYISPEIATRS 187
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
+ G + D+WS G + + LL G PF + K+ A+++ P++ E + L+ ++
Sbjct: 188 AH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL 246
Query: 251 LDPNPSTRISMAKIRESSWFRKGMNQKQKQK 281
L NP+ R+S++ + + + + + K K +
Sbjct: 247 LRRNPADRLSLSSVLDHPFMSRNSSTKSKDE 277
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 158/289 (54%), Gaps = 6/289 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGAS 296
KIL NPS RI++ I++ W+ K + + K+ S + +G S
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFS 290
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 158/289 (54%), Gaps = 6/289 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAGAS 296
KIL NPS RI++ I++ W+ K + + K+ S + +G S
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFS 291
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 6/287 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAG 294
KIL NPS RI++ I++ W+ K + + K+ S + +G
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSG 289
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 6/287 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAG 294
KIL NPS RI++ I++ W+ K + + K+ S + +G
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSG 289
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 6/287 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDAG 294
KIL NPS RI++ I++ W+ K + + K+ S + +G
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSG 289
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 153/273 (56%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 153/273 (56%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 60
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 240
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 241 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 273
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 153/273 (56%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEIXINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 153/273 (56%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 152/272 (55%), Gaps = 6/272 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQK 279
KIL NPS RI++ I++ W+ K + + K
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 144/259 (55%), Gaps = 6/259 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ +++GR LG+G F VY AR + +A+KV+ K ++ + G+ Q++REI + +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI+++Y + +I+ ++E+A GEL+ ++ K G+ E + + ++L +A+ +CH R
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + + CGT Y+ PE+I K +
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTH 190
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+W GV+ + L G PF + E +R+I + K P + + L+ K+L
Sbjct: 191 D-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 249
Query: 253 PNPSTRISMAKIRESSWFR 271
+P R+ + + E W +
Sbjct: 250 YHPPQRLPLKGVMEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 144/259 (55%), Gaps = 6/259 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ +++GR LG+G F VY AR + +A+KV+ K ++ + G+ Q++REI + +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI+++Y + +I+ ++E+A GEL+ ++ K G+ E + + ++L +A+ +CH R
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + + CGT Y+ PE+I K +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTH 189
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+W GV+ + L G PF + E +R+I + K P + + L+ K+L
Sbjct: 190 D-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 253 PNPSTRISMAKIRESSWFR 271
+P R+ + + E W +
Sbjct: 249 YHPPQRLPLKGVMEHPWVK 267
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 151/269 (56%), Gaps = 6/269 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQ 276
KIL NPS RI++ I++ W+ K + +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 150/267 (56%), Gaps = 6/267 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGM 274
KIL NPS RI++ I++ W+ K +
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 150/267 (56%), Gaps = 6/267 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGM 274
KIL NPS RI++ I++ W+ K +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 150/267 (56%), Gaps = 6/267 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGM 274
KIL NPS RI++ I++ W+ K +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 152/273 (55%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 150/269 (55%), Gaps = 6/269 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + ++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINAML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ CGT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQ 276
KIL NPS RI++ I++ W+ K + +
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 159/283 (56%), Gaps = 12/283 (4%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
P + +++ R LG G+F +V+ RS + A+KV+ K+ ++R+ + E ++
Sbjct: 1 PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVD 127
IV HP I++++ +IF +M+Y +GGELF+ + K + A+ Y ++ A++
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ HS+ + +RD+KP KI+DFG + K+ + + CGTP Y+APEV+
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFA-----KYVPDVTYXLCGTPDYIAPEVV 175
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLL 247
+ K Y+ + +D WS G++++ +LAGY PF+DSN ++ Y KI AE + P +F +V+ LL
Sbjct: 176 STKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLL 234
Query: 248 CKILDPNPSTRI-----SMAKIRESSWFRKGMNQKQKQKVTES 285
+++ + S R+ ++ WF++ + +K + E+
Sbjct: 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIET 277
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEIXINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ GT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEIXINKML 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ GT YVAPE++ R+
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 149/267 (55%), Gaps = 12/267 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
+T++Y++ LG+GAF+ V I T Q A K+I+ K + +++RE + R++
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKK-LSARDHQKLEREARICRLL 60
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+HPNIV+L++ ++ + + V + GGELF VA+ E A QQ++ +V+ CH
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
G+ HRD+KP K++DFGL+ Q Q GTP Y++PEV+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVL 178
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
+ Y G+ VD+W+CGV+L++LL GY PF D + +Y++I G +F P W PE
Sbjct: 179 RKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWF 270
+ L+ K+L NP+ RI+ ++ + W
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ GT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 6/273 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ GT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
KIL NPS RI++ I++ W+ K + + K+
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKR 274
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 149/267 (55%), Gaps = 12/267 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
+T++Y++ LG+GAF+ V I T Q A K+I+ K + +++RE + R++
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKK-LSARDHQKLEREARICRLL 60
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+HPNIV+L++ ++ + + V + GGELF VA+ E A QQ++ +V+ CH
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
G+ HRD+KP K++DFGL+ Q Q GTP Y++PEV+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVL 178
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
+ Y G+ VD+W+CGV+L++LL GY PF D + +Y++I G +F P W PE
Sbjct: 179 RKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWF 270
+ L+ K+L NP+ RI+ ++ + W
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 151/279 (54%), Gaps = 16/279 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y+ +LG GAF++V A RT + VA+K I K+ + G ++ EI+V+ ++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV L ++ + ++ +M+ GGELF++ V KG E A R Q+++AV + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 135 YHRDIKPXXXXXXXXXXXK---ISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
HRD+KP ISDFGLS + + +L T CGTP YVAPEV+ +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKA--EFKCPNW--FPPEVRKLL 247
Y + VD WS GV+ ++LL GY PF+D N +++ +I KA EF P W + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 248 CKILDPNPSTRISMAKIRESSWF--RKGMNQKQKQKVTE 284
+++ +P R + + + W +++ Q V+E
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSE 292
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 143/259 (55%), Gaps = 6/259 (2%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ +++ R LG+G F VY AR + +A+KV+ K ++ + G+ Q++REI + +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
PNI+++Y + +I+ ++E+A GEL+ ++ K G+ E + + ++L +A+ +CH R
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
V HRDIKP KI+DFG S A + + CGT Y+ PE+I K +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTH 189
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D EKVD+W GV+ + L G PF + E +R+I + K P + + L+ K+L
Sbjct: 190 D-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 253 PNPSTRISMAKIRESSWFR 271
+P R+ + + E W +
Sbjct: 249 YHPPQRLPLKGVMEHPWVK 267
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 151/279 (54%), Gaps = 16/279 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y+ +LG GAF++V A RT + VA+K I K+ + G ++ EI+V+ ++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV L ++ + ++ +M+ GGELF++ V KG E A R Q+++AV + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 135 YHRDIKPXXXXXXXXXXXK---ISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
HRD+KP ISDFGLS + + +L T CGTP YVAPEV+ +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKA--EFKCPNW--FPPEVRKLL 247
Y + VD WS GV+ ++LL GY PF+D N +++ +I KA EF P W + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 248 CKILDPNPSTRISMAKIRESSWF--RKGMNQKQKQKVTE 284
+++ +P R + + + W +++ Q V+E
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSE 292
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 151/279 (54%), Gaps = 16/279 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y+ +LG GAF++V A RT + VA+K I K+ + G ++ EI+V+ ++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV L ++ + ++ +M+ GGELF++ V KG E A R Q+++AV + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 135 YHRDIKPXXXXXXXXXXXK---ISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
HRD+KP ISDFGLS + + +L T CGTP YVAPEV+ +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKA--EFKCPNW--FPPEVRKLL 247
Y + VD WS GV+ ++LL GY PF+D N +++ +I KA EF P W + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 248 CKILDPNPSTRISMAKIRESSWF--RKGMNQKQKQKVTE 284
+++ +P R + + + W +++ Q V+E
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSE 292
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 149/267 (55%), Gaps = 6/267 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
E +++ + LG+GA+ +V A + T ++VAVK++D + V + IK+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCH 130
H N+V+ Y + + +EY GGELF+++ + E A+R+F QL+ V + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
G+ HRDIKP KISDFGL+ + + +++ LL+ GT YVAPE++ R+
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLL 247
+ E VD+WSCG+VL +LAG LP+ S+ + Y + + W LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 248 CKILDPNPSTRISMAKIRESSWFRKGM 274
KIL NPS RI++ I++ W+ K +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 141/258 (54%), Gaps = 16/258 (6%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
+LG GAF++V+ + T + A+K I K R ++ EI+V++ ++H NIV L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHENIVTL 71
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKV-AKGKLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
++ + + + VM+ GGELF+++ +G E A QQ+++AV + H G+ HRD
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 139 IKPXXXXXXXXXXXK---ISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGE 195
+KP I+DFGLS + Q+G++ T CGTP YVAPEV+ +K Y +
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPY-SK 186
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEVRKLLCKIL 251
VD WS GV+ ++LL GY PF++ +++ KI G EF+ P W + +C +L
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 252 DPNPSTRISMAKIRESSW 269
+ +P+ R + K W
Sbjct: 247 EKDPNERYTCEKALSHPW 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 150/279 (53%), Gaps = 16/279 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y+ +LG GAF++V A RT + VA+K I K + G ++ EI+V+ ++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKIKHPN 77
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV L ++ + ++ +M+ GGELF++ V KG E A R Q+++AV + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 135 YHRDIKPXXXXXXXXXXXK---ISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
HRD+KP ISDFGLS + + +L T CGTP YVAPEV+ +K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKA--EFKCPNW--FPPEVRKLL 247
Y + VD WS GV+ ++LL GY PF+D N +++ +I KA EF P W + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 248 CKILDPNPSTRISMAKIRESSWF--RKGMNQKQKQKVTE 284
+++ +P R + + + W +++ Q V+E
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSE 292
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 146/266 (54%), Gaps = 12/266 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
TE+Y++ LG+GAF+ V + Q A +I+ K + +++RE + R++
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK-LSARDHQKLEREARICRLL 67
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+HPNIV+L++ ++ + + + + GGELF VA+ E A QQ++ AV CH
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 131 SRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
GV HR++KP K++DFGL+ + + Q GTP Y++PEV+
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVL 185
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
+ Y G+ VD+W+CGV+L++LL GY PF D + +Y++I G +F P W PE
Sbjct: 186 RKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 244 RKLLCKILDPNPSTRISMAKIRESSW 269
+ L+ K+L NPS RI+ A+ + W
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPW 270
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 144/263 (54%), Gaps = 12/263 (4%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y++ LG+GAF+ V + Q A K+I+ K + +++RE + R+++HPN
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKK-LSARDHQKLEREARICRLLKHPN 82
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV+L++ ++ + + + + GGELF VA+ E A QQ++ AV CH GV
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 135 YHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
HRD+KP K++DFGL+ + + Q GTP Y++PEV+ +
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVLRKDP 200
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEVRKLL 247
Y G+ VD+W+CGV+L++LL GY PF D + +Y++I G +F P W PE + L+
Sbjct: 201 Y-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 259
Query: 248 CKILDPNPSTRISMAKIRESSWF 270
K+L NPS RI+ A+ + W
Sbjct: 260 NKMLTINPSKRITAAEALKHPWI 282
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 14/270 (5%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
E+Y + +LG+G+F +V + T Q AVKVI+K + I RE+ +++
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKK 77
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFC 129
+ HPNI++L+E++ S + V E GGELF+++ K K E A R +Q+ + + +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 130 HSRGVYHRDIKPXXXXXXXXXXX---KISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEV 186
H + HRD+KP KI DFGLS C Q+ + GT Y+APEV
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST---CFQQNTKMKDRIGTAYYIAPEV 194
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPE 242
+ R YD EK D+WS GV+L++LL+G PF+ N ++ +++ GK F P W +
Sbjct: 195 L-RGTYD-EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRK 272
+ L+ K+L +PS RI+ + E W +K
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 142/262 (54%), Gaps = 14/262 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
+E LG GAF++V A T + AVK I K + G I+ EI+V+R ++H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALK--GKESSIENEIAVLRKIKHEN 81
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
IV L ++ + + ++ VM+ GGELF++ V KG E A +Q+++AV + H G+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 135 YHRDIKPXXXXXXXXXXXK---ISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
HRD+KP ISDFGLS + + + ++ T CGTP YVAPEV+ +K
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKA--EFKCPNW--FPPEVRKLL 247
Y + VD WS GV+ ++LL GY PF+D N +++ +I KA EF P W + +
Sbjct: 199 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFI 257
Query: 248 CKILDPNPSTRISMAKIRESSW 269
+++ +P+ R + + W
Sbjct: 258 RNLMEKDPNKRYTCEQAARHPW 279
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 147/266 (55%), Gaps = 12/266 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
+T++Y++ +G+GAF+ V + T A K+I+ K + +++RE + R++
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKK-LSARDHQKLEREARICRLL 60
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+H NIV+L++ ++ + + V + GGELF VA+ E A QQ++ AV CH
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 131 SRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
GV HRD+KP K++DFGL+ Q Q GTP Y++PEV+
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVL 178
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
++ Y G+ VDIW+CGV+L++LL GY PF D + ++Y++I G +F P W PE
Sbjct: 179 RKEAY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 244 RKLLCKILDPNPSTRISMAKIRESSW 269
+ L+ ++L NP+ RI+ + + W
Sbjct: 238 KNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 145/275 (52%), Gaps = 13/275 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
L+++Y+ + LG GA+ +V + T A+K+I K + + + E++V++ +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++LYE K + VME +GGELF++ + + K E A +Q+++ + H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ HRD+KP KI DFGLSA + G + GT Y+APEV+
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV---GGKMKERLGTAYYIAPEVL 178
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
RK YD EK D+WSCGV+L++LL GY PF E+ +++ GK F P+W E
Sbjct: 179 -RKKYD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++L+ +L PS RIS + W K +QK
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKH 271
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 14/270 (5%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
E+Y + +LG+G+F +V + T Q AVKVI+K + I RE+ +++
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKK 77
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFC 129
+ HPNI++L+E++ S + V E GGELF+++ K K E A R +Q+ + + +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 130 HSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEV 186
H + HRD+KP KI DFGLS C Q+ + GT Y+APEV
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST---CFQQNTKMKDRIGTAYYIAPEV 194
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPE 242
+ R YD EK D+WS GV+L++LL+G PF+ N ++ +++ GK F P W +
Sbjct: 195 L-RGTYD-EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRK 272
+ L+ K+L +PS RI+ + E W +K
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 14/270 (5%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
E+Y + +LG+G+F +V + T Q AVKVI+K + I RE+ +++
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKK 77
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFC 129
+ HPNI++L+E++ S + V E GGELF+++ K K E A R +Q+ + + +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 130 HSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEV 186
H + HRD+KP KI DFGLS C Q+ + GT Y+APEV
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST---CFQQNTKMKDRIGTAYYIAPEV 194
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPE 242
+ R YD EK D+WS GV+L++LL+G PF+ N ++ +++ GK F P W +
Sbjct: 195 L-RGTYD-EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRK 272
+ L+ K+L +PS RI+ + E W +K
Sbjct: 253 AKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 145/268 (54%), Gaps = 8/268 (2%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRT--NQSVAVKVIDKDKIMRVGLADQIKREISVMR 69
L KY +G LLG+G++ KV T ++V + K + + G A+ +K+EI ++R
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEAN-VKKEIQLLR 61
Query: 70 IVRHPNIVQLYEVMAT--KSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINA 125
+RH N++QL +V+ K K++ VMEY G E+ + V + + A YF QLI+
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
+++ HS+G+ H+DIKP KIS G++ D T+ G+PA+ PE
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 186 VINR-KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVR 244
+ N + G KVDIWS GV L+ + G PF N+ +++ IGK + P P +
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 245 KLLCKILDPNPSTRISMAKIRESSWFRK 272
LL +L+ P+ R S+ +IR+ SWFRK
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 145/274 (52%), Gaps = 13/274 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
L+++Y+ + LG GA+ +V + T A+K+I K + + + E++V++ +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++LYE K + VME +GGELF++ + + K E A +Q+++ + H
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 131 SRGVYHRDIKPX---XXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ HRD+KP KI DFGLSA + G + GT Y+APEV+
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV---GGKMKERLGTAYYIAPEVL 195
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
RK YD EK D+WSCGV+L++LL GY PF E+ +++ GK F P+W E
Sbjct: 196 -RKKYD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
++L+ +L PS RIS + W K +QK
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQK 287
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 151/280 (53%), Gaps = 14/280 (5%)
Query: 7 NKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREIS 66
+K L+E Y+ + LG GA+ +V R T+ A+K+I K + ++ E++
Sbjct: 30 SKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVA 88
Query: 67 VMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINA 125
V++++ HPNI++LY+ K + VME KGGELF+++ + K E A +Q+++
Sbjct: 89 VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSG 148
Query: 126 VDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
V + H + HRD+KP KI DFGLSA+ + + + + GT Y+
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGTAYYI 205
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW-- 238
APEV+ RK YD EK D+WS GV+LF+LLAGY PF E+ RK+ GK F P W
Sbjct: 206 APEVL-RKKYD-EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 239 FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
+ L+ ++L + RIS + E W ++ ++K+
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKE 303
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 148/274 (54%), Gaps = 13/274 (4%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
+ ++ +++Y+ R+LG+G+F +V + T Q AVKVI K ++ + + + RE+
Sbjct: 18 QHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLIN 124
+++ + HPNI++LYE K + V E GGELF++ +++ + E A R +Q+++
Sbjct: 78 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 125 AVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
+ + H + HRD+KP +I DFGLS + + + GT Y
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYY 194
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW- 238
+APEV++ G EK D+WS GV+L++LL+G PF+ +N ++ +K+ GK F+ P W
Sbjct: 195 IAPEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 239 -FPPEVRKLLCKILDPNPSTRISMAKIRESSWFR 271
+ L+ K+L PS RIS + W +
Sbjct: 253 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 148/274 (54%), Gaps = 13/274 (4%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
+ ++ +++Y+ R+LG+G+F +V + T Q AVKVI K ++ + + + RE+
Sbjct: 41 QHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 100
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLIN 124
+++ + HPNI++LYE K + V E GGELF++ +++ + E A R +Q+++
Sbjct: 101 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 125 AVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
+ + H + HRD+KP +I DFGLS + + + GT Y
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYY 217
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW- 238
+APEV++ G EK D+WS GV+L++LL+G PF+ +N ++ +K+ GK F+ P W
Sbjct: 218 IAPEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 275
Query: 239 -FPPEVRKLLCKILDPNPSTRISMAKIRESSWFR 271
+ L+ K+L PS RIS + W +
Sbjct: 276 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 148/274 (54%), Gaps = 13/274 (4%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
+ ++ +++Y+ R+LG+G+F +V + T Q AVKVI K ++ + + + RE+
Sbjct: 42 QHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 101
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLIN 124
+++ + HPNI++LYE K + V E GGELF++ +++ + E A R +Q+++
Sbjct: 102 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 125 AVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
+ + H + HRD+KP +I DFGLS + + + GT Y
Sbjct: 162 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYY 218
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW- 238
+APEV++ G EK D+WS GV+L++LL+G PF+ +N ++ +K+ GK F+ P W
Sbjct: 219 IAPEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 276
Query: 239 -FPPEVRKLLCKILDPNPSTRISMAKIRESSWFR 271
+ L+ K+L PS RIS + W +
Sbjct: 277 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 142/272 (52%), Gaps = 13/272 (4%)
Query: 7 NKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREIS 66
N + ++ Y+V LG+GAF+ V T A K+I+ K+ +++RE
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREAR 80
Query: 67 VMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINA 125
+ R ++HPNIV+L++ + +S + V + GGELF VA+ E A QQ++ +
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 140
Query: 126 VDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+ +CHS G+ HR++KP K++DFGL+ + H GTP Y+
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYL 197
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW-- 238
+PEV+ + Y + VDIW+CGV+L++LL GY PF D + +Y +I G ++ P W
Sbjct: 198 SPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 256
Query: 239 FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
PE + L+ +L NP RI+ + + W
Sbjct: 257 VTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 134/256 (52%), Gaps = 10/256 (3%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
P V ++ +LLG+G F KV R T + A+K++ K+ I+ E V+
Sbjct: 5 PKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVD 127
+ RHP + L T ++ FVMEYA GGELF +++ ++ E+ AR Y ++++A++
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 124
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAP 184
+ HSR V +RDIK KI+DFGL CK DG + CGTP Y+AP
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAP 179
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVR 244
EV+ Y G VD W GVV++ ++ G LPF++ + ++ I E + P PE +
Sbjct: 180 EVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAK 238
Query: 245 KLLCKILDPNPSTRIS 260
LL +L +P R+
Sbjct: 239 SLLAGLLKKDPKQRLG 254
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 135/257 (52%), Gaps = 10/257 (3%)
Query: 8 KPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISV 67
+ V ++ +LLG+G F KV R T + A+K++ K+ I+ E V
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 68 MRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAV 126
++ RHP + L T ++ FVMEYA GGELF +++ ++ E+ AR Y ++++A+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVA 183
++ HSR V +RDIK KI+DFGL CK DG + T CGTP Y+A
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKTFCGTPEYLA 176
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEV 243
PEV+ Y G VD W GVV++ ++ G LPF++ + ++ I E + P PE
Sbjct: 177 PEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 235
Query: 244 RKLLCKILDPNPSTRIS 260
+ LL +L +P R+
Sbjct: 236 KSLLAGLLKKDPKQRLG 252
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 148/274 (54%), Gaps = 13/274 (4%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
+ ++ +++Y+ R+LG+G+F +V + T Q AVKVI K ++ + + + RE+
Sbjct: 24 QHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 83
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLIN 124
+++ + HPNI++LYE K + V E GGELF++ +++ + E A R +Q+++
Sbjct: 84 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 143
Query: 125 AVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
+ + H + HRD+KP +I DFGLS + + + GT Y
Sbjct: 144 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYY 200
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW- 238
+APEV++ G EK D+WS GV+L++LL+G PF+ +N ++ +K+ GK F+ P W
Sbjct: 201 IAPEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 258
Query: 239 -FPPEVRKLLCKILDPNPSTRISMAKIRESSWFR 271
+ L+ K+L PS RIS + W +
Sbjct: 259 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 134/254 (52%), Gaps = 10/254 (3%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++ +LLG+G F KV R T + A+K++ K+ I+ E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
RHP + L T ++ FVMEYA GGELF +++ ++ E+ AR Y ++++A+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAPEV 186
HSR V +RDIK KI+DFGL CK DG + T CGTP Y+APEV
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKTFCGTPEYLAPEV 176
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
+ Y G VD W GVV++ ++ G LPF++ + ++ I E + P PE + L
Sbjct: 177 LEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 247 LCKILDPNPSTRIS 260
L +L +P R+
Sbjct: 236 LAGLLKKDPKQRLG 249
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 143/266 (53%), Gaps = 12/266 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
T+ Y++ LG+GAF+ V Q A K+I+ K + +++RE + R++
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKK-LSARDHQKLEREARICRLL 87
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+HPNIV+L++ ++ + + V + GGELF VA+ E A Q++ +V+ H
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 131 SRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ HRD+KP K++DFGL+ Q + Q GTP Y++PEV+
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF--GFAGTPGYLSPEVL 205
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
+ Y G+ VDIW+CGV+L++LL GY PF D + ++Y++I G +F P W PE
Sbjct: 206 RKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 264
Query: 244 RKLLCKILDPNPSTRISMAKIRESSW 269
+ L+ ++L NP+ RI+ + + W
Sbjct: 265 KNLINQMLTINPAKRITADQALKHPW 290
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 141/263 (53%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFGL+ K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 134/254 (52%), Gaps = 10/254 (3%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++ +LLG+G F KV R T + A+K++ K+ I+ E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
RHP + L T ++ FVMEYA GGELF +++ ++ E+ AR Y ++++A+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAPEV 186
HSR V +RDIK KI+DFGL CK DG + T CGTP Y+APEV
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKTFCGTPEYLAPEV 176
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
+ Y G VD W GVV++ ++ G LPF++ + ++ I E + P PE + L
Sbjct: 177 LEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 247 LCKILDPNPSTRIS 260
L +L +P R+
Sbjct: 236 LAGLLKKDPKQRLG 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + ++ GT YV+PE++ K
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS- 207
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 267
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 268 LDATKRLGCEEM 279
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 148/276 (53%), Gaps = 17/276 (6%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
+ ++ +++Y+ R+LG+G+F +V + T Q AVKVI K ++ + + + RE+
Sbjct: 18 QHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLIN 124
+++ + HPNI +LYE K + V E GGELF++ +++ + E A R +Q+++
Sbjct: 78 QLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 125 AVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSAL--AQCKHQDGLLHTTCGTP 179
+ + H + HRD+KP +I DFGLS A K +D + GT
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI-----GTA 192
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPN 237
Y+APEV++ G EK D+WS GV+L++LL+G PF+ +N ++ +K+ GK F+ P
Sbjct: 193 YYIAPEVLH--GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
Query: 238 W--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFR 271
W + L+ K L PS RIS + W +
Sbjct: 251 WKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + ++ GT YV+PE++ K
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS- 211
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 271
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 272 LDATKRLGCEEM 283
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 140/266 (52%), Gaps = 13/266 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
++ Y+V LG+GAF+ V T A K+I+ K+ +++RE + R +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKL 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+HPNIV+L++ + +S + V + GGELF VA+ E A QQ++ ++ +CH
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
S G+ HR++KP K++DFGL+ + H GTP Y++PEV+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPEVL 179
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
+ Y + VDIW+CGV+L++LL GY PF D + +Y +I G ++ P W PE
Sbjct: 180 KKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 244 RKLLCKILDPNPSTRISMAKIRESSW 269
+ L+ +L NP RI+ + + W
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 13/267 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
++ Y+V LG+GAF+ V T A K+I+ K+ +++RE + R +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKL 62
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+HPNIV+L++ + +S + V + GGELF VA+ E A QQ++ ++ +CH
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
S G+ HR++KP K++DFGL+ + H GTP Y++PEV+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPEVL 179
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
+ Y + VDIW+CGV+L++LL GY PF D + +Y +I G ++ P W PE
Sbjct: 180 KKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWF 270
+ L+ +L NP RI+ + + W
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 13/267 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
++ Y+V LG+GAF+ V T A K+I+ K+ +++RE + R +
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKL 61
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQQLINAVDFCH 130
+HPNIV+L++ + +S + V + GGELF VA+ E A QQ++ ++ +CH
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
S G+ HR++KP K++DFGL+ + H GTP Y++PEV+
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPEVL 178
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEV 243
+ Y + VDIW+CGV+L++LL GY PF D + +Y +I G ++ P W PE
Sbjct: 179 KKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 237
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWF 270
+ L+ +L NP RI+ + + W
Sbjct: 238 KSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKS- 208
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 192
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 252
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 253 LDATKRLGCEEM 264
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 208
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 207
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 267
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 268 LDATKRLGCEEM 279
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 150/266 (56%), Gaps = 15/266 (5%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIR---TNQSVAVKVIDKDKI-MRVGLADQIKREISVMRI 70
++E+ ++LGQG+F KV+ + I Q A+KV+ K + +R + +++R+I V
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-- 83
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
V HP IV+L+ T+ K++ ++++ +GG+LF +++K + E+ + Y +L A+D
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
HS G+ +RD+KP K++DFGLS + + ++ CGT Y+APEV+NR
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCK 249
+G+ + D WS GV++F +L G LPF + E I KA+ P + PE + LL
Sbjct: 202 RGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 260
Query: 250 ILDPNPSTRI-----SMAKIRESSWF 270
+ NP+ R+ + +I+ S+F
Sbjct: 261 LFKRNPANRLGAGPDGVEEIKRHSFF 286
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 150/266 (56%), Gaps = 15/266 (5%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIR---TNQSVAVKVIDKDKI-MRVGLADQIKREISVMRI 70
++E+ ++LGQG+F KV+ + I Q A+KV+ K + +R + +++R+I V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-- 82
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
V HP IV+L+ T+ K++ ++++ +GG+LF +++K + E+ + Y +L A+D
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
HS G+ +RD+KP K++DFGLS + + ++ CGT Y+APEV+NR
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCK 249
+G+ + D WS GV++F +L G LPF + E I KA+ P + PE + LL
Sbjct: 201 RGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 259
Query: 250 ILDPNPSTRI-----SMAKIRESSWF 270
+ NP+ R+ + +I+ S+F
Sbjct: 260 LFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 208
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 150/277 (54%), Gaps = 18/277 (6%)
Query: 2 FGMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
+ +D + L++ +EV LG+GA + VY + T + A+KV+ K ++ +
Sbjct: 41 YWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI-----V 95
Query: 62 KREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK-VAKGKLKEDAARRYFQ 120
+ EI V+ + HPNI++L E+ T ++I V+E GGELF++ V KG E A +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK 155
Query: 121 QLINAVDFCHSRGVYHRDIKPXXXXXXX---XXXXKISDFGLSALAQCKHQDGLLHTTCG 177
Q++ AV + H G+ HRD+KP KI+DFGLS + + HQ L+ T CG
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQ-VLMKTVCG 212
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIE-MYRKIGKAE--FK 234
TP Y APE++ Y G +VD+WS G++ ++LL G+ PF+D + M+R+I E F
Sbjct: 213 TPGYCAPEILRGCAY-GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 235 CPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSW 269
P W + L+ K++ +P R++ + + W
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 141/263 (53%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFGL+ K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIR---TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
++E+ ++LGQG+F KV+ + I Q A+KV+ K ++V + K E ++ V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK-ATLKVRDRVRTKMERDILVEV 83
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFCH 130
HP IV+L+ T+ K++ ++++ +GG+LF +++K + E+ + Y +L A+D H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
S G+ +RD+KP K++DFGLS + + ++ CGT Y+APEV+NR+
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
G+ + D WS GV++F +L G LPF + E I KA+ P + PE + LL +
Sbjct: 202 GHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRML 260
Query: 251 LDPNPSTRI-----SMAKIRESSWF 270
NP+ R+ + +I+ S+F
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 187
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 247
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 248 LDATKRLGCEEM 259
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 188
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 248
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 249 LDATKRLGCEEM 260
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 186
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 246
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 247 LDATKRLGCEEM 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 185
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 245
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 246 LDATKRLGCEEM 257
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 275
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 276 LDATKRLGCEEM 287
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 211
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 271
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 272 LDATKRLGCEEM 283
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 213
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLV 273
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 274 LDATKRLGCEEM 285
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++ +LLG+G F KV R T + A+K++ K+ I+ E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
RHP + L T ++ FVMEYA GGELF +++ ++ E+ AR Y ++++A+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAPEV 186
HSR V +RDIK KI+DFGL CK DG + CGTP Y+APEV
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAPEV 176
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
+ Y G VD W GVV++ ++ G LPF++ + ++ I E + P PE + L
Sbjct: 177 LEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 247 LCKILDPNPSTRIS 260
L +L +P R+
Sbjct: 236 LAGLLKKDPKQRLG 249
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G T CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 143/268 (53%), Gaps = 25/268 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR-HPNIVQLY 80
LG+G+F+ ++NQ+ AVK+I K + ++EI+ +++ HPNIV+L+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLH 72
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
EV + F VME GGELF ++ K K E A ++L++AV H GV HRD+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 140 KPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEK 196
KP KI DFG + L +Q L T C T Y APE++N+ GYD E
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAPELLNQNGYD-ES 189
Query: 197 VDIWSCGVVLFVLLAGYLPF--HDSNL-----IEMYRKIGKAEFKCPN--W--FPPEVRK 245
D+WS GV+L+ +L+G +PF HD +L +E+ +KI K +F W E +
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249
Query: 246 LLCKILDPNPSTRISMAKIRESSWFRKG 273
L+ +L +P+ R+ M+ +R + W + G
Sbjct: 250 LIQGLLTVDPNKRLKMSGLRYNEWLQDG 277
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++ +LLG+G F KV R T + A+K++ K+ I+ E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
RHP + L T ++ FVMEYA GGELF +++ ++ E+ AR Y ++++A+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAPEV 186
HSR V +RDIK KI+DFGL CK DG + CGTP Y+APEV
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAPEV 176
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
+ Y G VD W GVV++ ++ G LPF++ + ++ I E + P PE + L
Sbjct: 177 LEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 247 LCKILDPNPSTRIS 260
L +L +P R+
Sbjct: 236 LAGLLKKDPKQRLG 249
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 146/278 (52%), Gaps = 18/278 (6%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
+ + Y + +G+G++ +V A T A K I K + V D+ K+EI +M+ +
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---DRFKQEIEIMKSL 80
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFCH 130
HPNI++LYE + I+ VME GGELF +V ++ +E A R + +++AV +CH
Sbjct: 81 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEV 186
V HRD+KP K+ DFGL+A + + G ++ T GTP YV+P+V
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA----RFKPGKMMRTKVGTPYYVSPQV 196
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCP--NWF--PPE 242
+ +G G + D WS GV+++VLL GY PF E+ KI + F P +W P+
Sbjct: 197 L--EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 254
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
L+ ++L +P RI+ + E WF K ++ +
Sbjct: 255 AESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRN 292
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 146/278 (52%), Gaps = 18/278 (6%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
+ + Y + +G+G++ +V A T A K I K + V D+ K+EI +M+ +
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---DRFKQEIEIMKSL 63
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFCH 130
HPNI++LYE + I+ VME GGELF +V ++ +E A R + +++AV +CH
Sbjct: 64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 131 SRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVAPEV 186
V HRD+KP K+ DFGL+A + + G ++ T GTP YV+P+V
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA----RFKPGKMMRTKVGTPYYVSPQV 179
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCP--NWF--PPE 242
+ +G G + D WS GV+++VLL GY PF E+ KI + F P +W P+
Sbjct: 180 L--EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 237
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
L+ ++L +P RI+ + E WF K ++ +
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRN 275
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++ +LLG+G F KV R T + A+K++ K+ I+ E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
RHP + L T ++ FVMEYA GGELF +++ ++ E+ AR Y ++++A+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAPEV 186
HSR V +RDIK KI+DFGL CK DG + CGTP Y+APEV
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAPEV 176
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
+ Y G VD W GVV++ ++ G LPF++ + ++ I E + P PE + L
Sbjct: 177 LEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL 235
Query: 247 LCKILDPNPSTRIS 260
L +L +P R+
Sbjct: 236 LAGLLKKDPKQRLG 249
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G T CGTP Y+APE+I KGY
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 202 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 260
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 261 VDLTKRFGNLKDGVNDIKNHKWF 283
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 137/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N ++ KI K E+ P F P+ R L+ K+L
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 137/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 208
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P + +L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P + +L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P + +L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK G L + K G E R Y ++++A+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + ++ GT YV+PE++ K
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS- 210
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N +++KI K E+ P F P+ R L+ K+L
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 148/291 (50%), Gaps = 31/291 (10%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV--------------- 55
V +Y + +G+G++ V A + N A+KV+ K K++R
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 56 --------GLADQIKREISVMRIVRHPNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKV 105
G +Q+ +EI++++ + HPN+V+L EV+ + ++ V E G +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 106 AKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQC 165
L ED AR YFQ LI +++ H + + HRDIKP KI+DFG+S +
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEF 187
Query: 166 KHQDGLLHTTCGTPAYVAPEVIN--RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIE 223
K D LL T GTPA++APE ++ RK + G+ +D+W+ GV L+ + G PF D ++
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 224 MYRKIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
++ KI + P+ +++ L+ ++LD NP +RI + +I+ W +
Sbjct: 248 LHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 137/252 (54%), Gaps = 2/252 (0%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ G++LG+G+F+ V AR + T++ A+K+++K I++ + RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P V+LY K++F + YAK GEL + K G E R Y ++++A+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
G+ HRD+KP +I+DFG + + + + + GT YV+PE++ K
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ D+W+ G +++ L+AG PF N ++ KI K E+ P F P+ R L+ K+L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 253 PNPSTRISMAKI 264
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 138/258 (53%), Gaps = 11/258 (4%)
Query: 8 KPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISV 67
K V ++E +LLG+G F KV + T + A+K++ K+ I+ E V
Sbjct: 142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 68 MRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAV 126
++ RHP + L T ++ FVMEYA GGELF +++ ++ ED AR Y ++++A+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 261
Query: 127 DFCHS-RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYV 182
D+ HS + V +RD+K KI+DFGL CK +DG + T CGTP Y+
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKTFCGTPEYL 316
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
APEV+ Y G VD W GVV++ ++ G LPF++ + +++ I E + P PE
Sbjct: 317 APEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 375
Query: 243 VRKLLCKILDPNPSTRIS 260
+ LL +L +P R+
Sbjct: 376 AKSLLSGLLKKDPKQRLG 393
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 138/258 (53%), Gaps = 11/258 (4%)
Query: 8 KPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISV 67
K V ++E +LLG+G F KV + T + A+K++ K+ I+ E V
Sbjct: 145 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 68 MRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAV 126
++ RHP + L T ++ FVMEYA GGELF +++ ++ ED AR Y ++++A+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 264
Query: 127 DFCHS-RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYV 182
D+ HS + V +RD+K KI+DFGL CK +DG + T CGTP Y+
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKTFCGTPEYL 319
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
APEV+ Y G VD W GVV++ ++ G LPF++ + +++ I E + P PE
Sbjct: 320 APEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 378
Query: 243 VRKLLCKILDPNPSTRIS 260
+ LL +L +P R+
Sbjct: 379 AKSLLSGLLKKDPKQRLG 396
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 11/257 (4%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
P V ++E +LLG+G F KV + T + A+K++ K+ I+ E V+
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVD 127
+ RHP + L T ++ FVMEYA GGELF +++ ++ ED AR Y ++++A+D
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 124
Query: 128 FCHS-RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVA 183
+ HS + V +RD+K KI+DFGL CK +DG + CGTP Y+A
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPEYLA 179
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEV 243
PEV+ Y G VD W GVV++ ++ G LPF++ + +++ I E + P PE
Sbjct: 180 PEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA 238
Query: 244 RKLLCKILDPNPSTRIS 260
+ LL +L +P R+
Sbjct: 239 KSLLSGLLKKDPKQRLG 255
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 155/319 (48%), Gaps = 17/319 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR- 72
+ +E R+LG+G+F KV AR T AVKV+ KD I++ + E ++ + R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA-ARRYFQQLINAVDFCHS 131
HP + QL+ T ++FFVME+ GG+L + K + ++A AR Y ++I+A+ F H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT-CGTPAYVAPEVINRK 190
+G+ +RD+K K++DFG+ C +G+ T CGTP Y+APE++
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC---NGVTTATFCGTPDYIAPEILQEM 199
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
Y G VD W+ GV+L+ +L G+ PF N +++ I E P W + +L
Sbjct: 200 LY-GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSF 258
Query: 251 LDPNPSTRI-SMAKIRESSWFRK---------GMNQKQKQKVTESKDAASQDAGASAPQG 300
+ NP+ R+ S+ + E + R +N +Q + + + +D P
Sbjct: 259 MTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDF 318
Query: 301 SSSIAAEIKQELGQLPNLN 319
+ G LP +N
Sbjct: 319 IKEEPVLXPIDEGHLPMIN 337
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + +G G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E R LG G+F +V + T A+K++DK K++++ + E + + V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ V+EYA GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 134/255 (52%), Gaps = 14/255 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSI---RTNQSVAVKVIDKDKIMRVGL-ADQIKREISVMR 69
E +E+ R+LG+G + KV+ R + T + A+KV+ K I+R K E +++
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDF 128
V+HP IV L T K++ ++EY GGELF ++ + G ED A Y ++ A+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCK---HQDGLLHTTCGTPAYVAPE 185
H +G+ +RD+KP K++DFGL CK H + HT CGT Y+APE
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL-----CKESIHDGTVTHTFCGTIEYMAPE 191
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
++ R G++ VD WS G +++ +L G PF N + KI K + P + E R
Sbjct: 192 ILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250
Query: 246 LLCKILDPNPSTRIS 260
LL K+L N ++R+
Sbjct: 251 LLKKLLKRNAASRLG 265
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + +G G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GG++F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + +G G+F +V + + T A+K++DK K++++ + E +++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GG++F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP K++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 11/255 (4%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++E +LLG+G F KV + T + A+K++ K+ I+ E V++
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
RHP + L T ++ FVMEYA GGELF +++ ++ ED AR Y ++++A+D+
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 130 HS-RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAPE 185
HS + V +RD+K KI+DFGL CK +DG + CGTP Y+APE
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPEYLAPE 180
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
V+ Y G VD W GVV++ ++ G LPF++ + +++ I E + P PE +
Sbjct: 181 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKS 239
Query: 246 LLCKILDPNPSTRIS 260
LL +L +P R+
Sbjct: 240 LLSGLLKKDPKQRLG 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 11/255 (4%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++E +LLG+G F KV + T + A+K++ K+ I+ E V++
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFC 129
RHP + L T ++ FVMEYA GGELF +++ ++ ED AR Y ++++A+D+
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 130 HS-RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH--QDG-LLHTTCGTPAYVAPE 185
HS + V +RD+K KI+DFGL CK +DG + CGTP Y+APE
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPEYLAPE 179
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
V+ Y G VD W GVV++ ++ G LPF++ + +++ I E + P PE +
Sbjct: 180 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKS 238
Query: 246 LLCKILDPNPSTRIS 260
LL +L +P R+
Sbjct: 239 LLSGLLKKDPKQRLG 253
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 209 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 268 VDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 209 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 267
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 268 VDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G T CGTP Y+APE+I KGY
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGATWTLCGTPEYLAPEIILSKGY 236
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+++E + LG G+F +V + T A+K++DK K++++ + E +++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I WF
Sbjct: 276 VDLTKRFGNLKNGVNDIXNHKWF 298
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 14/255 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSI---RTNQSVAVKVIDKDKIMRVGL-ADQIKREISVMR 69
E +E+ R+LG+G + KV+ R + T + A+KV+ K I+R K E +++
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDF 128
V+HP IV L T K++ ++EY GGELF ++ + G ED A Y ++ A+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCK---HQDGLLHTTCGTPAYVAPE 185
H +G+ +RD+KP K++DFGL CK H + H CGT Y+APE
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL-----CKESIHDGTVTHXFCGTIEYMAPE 191
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
++ R G++ VD WS G +++ +L G PF N + KI K + P + E R
Sbjct: 192 ILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250
Query: 246 LLCKILDPNPSTRIS 260
LL K+L N ++R+
Sbjct: 251 LLKKLLKRNAASRLG 265
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 136/249 (54%), Gaps = 8/249 (3%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQS---VAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+E+ ++LGQG+F KV+ R + S A+KV+ K ++V + K E ++ V
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKK-ATLKVRDRVRTKMERDILADVN 88
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFCHS 131
HP +V+L+ T+ K++ ++++ +GG+LF +++K + E+ + Y +L +D HS
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
G+ +RD+KP K++DFGLS A + ++ CGT Y+APEV+NR+G
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKA--YSFCGTVEYMAPEVVNRQG 206
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKIL 251
+ D WS GV++F +L G LPF + E I KA+ P + E + LL +
Sbjct: 207 H-SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALF 265
Query: 252 DPNPSTRIS 260
NP+ R+
Sbjct: 266 KRNPANRLG 274
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 136/268 (50%), Gaps = 18/268 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-- 71
E +E+ ++LG+G+F KV+ A +TNQ A+K + KD ++ + D ++ + R++
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL---MDDDVECTMVEKRVLSL 74
Query: 72 --RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDF 128
HP + ++ TK +FFVMEY GG+L + K A Y ++I + F
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ---DGLLHTTCGTPAYVAPE 185
HS+G+ +RD+K KI+DFG+ CK D + CGTP Y+APE
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGM-----CKENMLGDAKTNEFCGTPDYIAPE 189
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
++ + Y+ VD WS GV+L+ +L G PFH + E++ I P W E +
Sbjct: 190 ILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
Query: 246 LLCKILDPNPSTRISM-AKIRESSWFRK 272
LL K+ P R+ + IR+ FR+
Sbjct: 249 LLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 137/271 (50%), Gaps = 9/271 (3%)
Query: 9 PSVLTE-----KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
P VL + +Y GR LG+G FAK Y + T + A KV+ K +++ +++
Sbjct: 32 PDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST 91
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQL 122
EI++ + + +P++V + ++ V+E + L + K + E AR + +Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
I V + H+ V HRD+K KI DFGL+ + + T CGTP Y+
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KTLCGTPNYI 209
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
APEV+ +KG+ E VDIWS G +L+ LL G PF S L E Y +I K E+ P P
Sbjct: 210 APEVLCKKGHSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
L+ ++L +P+ R S+A++ +F G
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIM--RVGLA-DQIKREIS 66
S++ + YE+G LG G FA V R T + A K I K ++ R G++ ++I+RE++
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 67 VMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINA 125
++R +RHPNI+ L+++ K+ + ++E GGELF+ +A K L ED A ++ +Q+++
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
V + HS+ + H D+KP K+ DFG++ + ++ GTP +
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEF 177
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPP 241
VAPE++N + G + D+WS GV+ ++LL+G PF E I + +
Sbjct: 178 VAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 236
Query: 242 EVRKL----LCKILDPNPSTRISMAKIRESSWFR 271
+L + ++L +P R+++A+ E SW +
Sbjct: 237 NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 154/316 (48%), Gaps = 26/316 (8%)
Query: 8 KPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD-------- 59
K + E Y R LG GA+ +V + + A+KVI K + + +D
Sbjct: 30 KEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKF 89
Query: 60 --QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKV-AKGKLKEDAAR 116
+I EIS+++ + HPNI++L++V K + V E+ +GGELF ++ + K E A
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 117 RYFQQLINAVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLH 173
+Q+++ + + H + HRDIKP KI DFGLS+ +D L
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLR 206
Query: 174 TTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKA 231
GT Y+APEV+ +K EK D+WSCGV++++LL GY PF N ++ +K+ GK
Sbjct: 207 DRLGTAYYIAPEVLKKKY--NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264
Query: 232 EFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAA 289
F +W E ++L+ +L + + R + + S W +K N K ++ K
Sbjct: 265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINK---SDQKTLC 321
Query: 290 SQDAGASAPQGSSSIA 305
+ +GS +A
Sbjct: 322 GALSNMRKFEGSQKLA 337
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIM--RVGLA-DQIKREIS 66
S++ + YE+G LG G FA V R T + A K I K ++ R G++ ++I+RE++
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 67 VMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINA 125
++R +RHPNI+ L+++ K+ + ++E GGELF+ +A K L ED A ++ +Q+++
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 141
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
V + HS+ + H D+KP K+ DFG++ + ++ GTP +
Sbjct: 142 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEF 198
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPP 241
VAPE++N + G + D+WS GV+ ++LL+G PF E I + +
Sbjct: 199 VAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 257
Query: 242 EVRKL----LCKILDPNPSTRISMAKIRESSWFR 271
+L + ++L +P R+ +A+ E SW +
Sbjct: 258 NTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 144/289 (49%), Gaps = 29/289 (10%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-R 69
V ++ Y V +G G++++ TN AVKVIDK K EI ++ R
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLR 76
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDF 128
+HPNI+ L +V ++ V E +GGEL +K+ + K E A + V++
Sbjct: 77 YGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEY 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXX----KISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
HS+GV HRD+KP +I DFG + Q + ++GLL T C T +VAP
Sbjct: 137 LHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCP--NW- 238
EV+ R+GYD E DIWS G++L+ +LAGY PF + E+ +IG +F NW
Sbjct: 195 EVLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
Query: 239 -FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESK 286
+ L+ K+L +P R++ ++ + W QK K+ +S+
Sbjct: 254 TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV------TQKDKLPQSQ 296
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 144/289 (49%), Gaps = 29/289 (10%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-R 69
V ++ Y V +G G++++ TN AVKVIDK K EI ++ R
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLR 76
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDF 128
+HPNI+ L +V ++ V E +GGEL +K+ + K E A + V++
Sbjct: 77 YGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEY 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXX----KISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
HS+GV HRD+KP +I DFG + Q + ++GLL T C T +VAP
Sbjct: 137 LHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCP--NW- 238
EV+ R+GYD E DIWS G++L+ +LAGY PF + E+ +IG +F NW
Sbjct: 195 EVLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWN 253
Query: 239 -FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESK 286
+ L+ K+L +P R++ ++ + W QK K+ +S+
Sbjct: 254 TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV------TQKDKLPQSQ 296
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 143/270 (52%), Gaps = 28/270 (10%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R LG GAF V+ + +K I+KD+ +V + +QI+ EI V++ + HPNI+++
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPM-EQIEAEIEVLKSLDHPNIIKI 85
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKV----AKGK-LKEDAARRYFQQLINAVDFCHSRGV 134
+EV ++ VME +GGEL ++ A+GK L E +Q++NA+ + HS+ V
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 135 YHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTT--CGTPAYVAPEVINR 189
H+D+KP KI DFGL+ L + H+T GT Y+APEV R
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-----HSTNAAGTALYMAPEVFKR 200
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNW------FPPEV 243
K DIWS GVV++ LL G LPF ++L E+ + KA +K PN+ P+
Sbjct: 201 DV--TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ---KATYKEPNYAVECRPLTPQA 255
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKG 273
LL ++L +P R S A++ WF++
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 217 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 275
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 276 VDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 181
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 237 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 295
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 296 VDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLIIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 155
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 210
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 211 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 269
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 270 VDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 203 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 261
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 262 VDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 147/281 (52%), Gaps = 16/281 (5%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIM--RVGLA-D 59
GM + + + YE+G LG G FA V R T + A K I K ++ R G++ +
Sbjct: 1 GMSTFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE 60
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRY 118
+I+RE++++R +RHPNI+ L+++ K+ + ++E GGELF+ +A K L ED A ++
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHT 174
+Q+++ V + HS+ + H D+KP K+ DFG++ + ++
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKN 177
Query: 175 TCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFK 234
GTP +VAPE++N + G + D+WS GV+ ++LL+G PF E I +
Sbjct: 178 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 236
Query: 235 CPNWFPPEVRKL----LCKILDPNPSTRISMAKIRESSWFR 271
+ +L + ++L +P R+ +A+ E SW +
Sbjct: 237 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 138/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRI-----SMAKIRESSWF 270
+ + R + I+ WF
Sbjct: 275 VDLTKRFGNLPNGVNDIKNHKWF 297
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 158/315 (50%), Gaps = 31/315 (9%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ------IK 62
P L ++Y + + LG GA +V A +T + VA+K+I K K +G A + ++
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA-IGSAREADPALNVE 63
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQ 121
EI +++ + HP I+++ + + V+E +GGELF+KV K LKE + YF Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGT 178
++ AV + H G+ HRD+KP KI+DFG S + + L+ T CGT
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 179 PAYVAPEVINRKGYDG--EKVDIWSCGVVLFVLLAGYLPFHDSNL-IEMYRKIGKAEFKC 235
P Y+APEV+ G G VD WS GV+LF+ L+GY PF + + + +I ++
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN- 238
Query: 236 PNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWFR-KGMNQKQKQKVTESK 286
F PEV L+ K+L +P R + + W + + M +K + ++E
Sbjct: 239 ---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEEN 295
Query: 287 DAASQDAGASAPQGS 301
++ ++ + P S
Sbjct: 296 ESTAKPQVLAQPSTS 310
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 9/271 (3%)
Query: 9 PSVLTE-----KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
P VL + +Y GR LG+G FAK Y + T + A KV+ K +++ +++
Sbjct: 32 PDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST 91
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQL 122
EI++ + + +P++V + ++ V+E + L + K + E AR + +Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
I V + H+ V HRD+K KI DFGL+ + + CGTP Y+
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KXLCGTPNYI 209
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
APEV+ +KG+ E VDIWS G +L+ LL G PF S L E Y +I K E+ P P
Sbjct: 210 APEVLCKKGHSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
L+ ++L +P+ R S+A++ +F G
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 9/271 (3%)
Query: 9 PSVLTE-----KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
P VL + +Y GR LG+G FAK Y + T + A KV+ K +++ +++
Sbjct: 16 PDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST 75
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQL 122
EI++ + + +P++V + ++ V+E + L + K + E AR + +Q
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
I V + H+ V HRD+K KI DFGL+ + + CGTP Y+
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYI 193
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
APEV+ +KG+ E VDIWS G +L+ LL G PF S L E Y +I K E+ P P
Sbjct: 194 APEVLCKKGHSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 252
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
L+ ++L +P+ R S+A++ +F G
Sbjct: 253 ASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 9/271 (3%)
Query: 9 PSVLTE-----KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
P VL + +Y GR LG+G FAK Y + T + A KV+ K +++ +++
Sbjct: 32 PDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST 91
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQL 122
EI++ + + +P++V + ++ V+E + L + K + E AR + +Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
I V + H+ V HRD+K KI DFGL+ + + CGTP Y+
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPNYI 209
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE 242
APEV+ +KG+ E VDIWS G +L+ LL G PF S L E Y +I K E+ P P
Sbjct: 210 APEVLCKKGHSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
L+ ++L +P+ R S+A++ +F G
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 157/315 (49%), Gaps = 31/315 (9%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ------IK 62
P L ++Y + + LG GA +V A +T + VA+K+I K K +G A + ++
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA-IGSAREADPALNVE 63
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQ 121
EI +++ + HP I+++ + + V+E +GGELF+KV K LKE + YF Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGT 178
++ AV + H G+ HRD+KP KI+DFG S + + L+ T CGT
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 179 PAYVAPEVINRKGYDG--EKVDIWSCGVVLFVLLAGYLPFHDSNL-IEMYRKIGKAEFKC 235
P Y+APEV+ G G VD WS GV+LF+ L+GY PF + + + +I ++
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN- 238
Query: 236 PNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWFR-KGMNQKQKQKVTESK 286
F PEV L+ K+L +P R + + W + + M +K + ++E
Sbjct: 239 ---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEEN 295
Query: 287 DAASQDAGASAPQGS 301
++ + + P S
Sbjct: 296 ESTALPQVLAQPSTS 310
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 157/315 (49%), Gaps = 31/315 (9%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ------IK 62
P L ++Y + + LG GA +V A +T + VA+K+I K K +G A + ++
Sbjct: 11 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA-IGSAREADPALNVE 69
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQ 121
EI +++ + HP I+++ + + V+E +GGELF+KV K LKE + YF Q
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGT 178
++ AV + H G+ HRD+KP KI+DFG S + + L+ T CGT
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 185
Query: 179 PAYVAPEVINRKGYDG--EKVDIWSCGVVLFVLLAGYLPFHDSNL-IEMYRKIGKAEFKC 235
P Y+APEV+ G G VD WS GV+LF+ L+GY PF + + + +I ++
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN- 244
Query: 236 PNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWFR-KGMNQKQKQKVTESK 286
F PEV L+ K+L +P R + + W + + M +K + ++E
Sbjct: 245 ---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEEN 301
Query: 287 DAASQDAGASAPQGS 301
++ + + P S
Sbjct: 302 ESTALPQVLAQPSTS 316
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+AP +I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 157/315 (49%), Gaps = 31/315 (9%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ------IK 62
P L ++Y + + LG GA +V A +T + VA+K+I K K +G A + ++
Sbjct: 4 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA-IGSAREADPALNVE 62
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQ 121
EI +++ + HP I+++ + + V+E +GGELF+KV K LKE + YF Q
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGT 178
++ AV + H G+ HRD+KP KI+DFG S + + L+ T CGT
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 178
Query: 179 PAYVAPEVINRKGYDG--EKVDIWSCGVVLFVLLAGYLPFHDSNL-IEMYRKIGKAEFKC 235
P Y+APEV+ G G VD WS GV+LF+ L+GY PF + + + +I ++
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN- 237
Query: 236 PNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWFR-KGMNQKQKQKVTESK 286
F PEV L+ K+L +P R + + W + + M +K + ++E
Sbjct: 238 ---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEEN 294
Query: 287 DAASQDAGASAPQGS 301
++ + + P S
Sbjct: 295 ESTALPQVLAQPSTS 309
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 157/315 (49%), Gaps = 31/315 (9%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ------IK 62
P L ++Y + + LG GA +V A +T + VA+K+I K K +G A + ++
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFA-IGSAREADPALNVE 63
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQ 121
EI +++ + HP I+++ + + V+E +GGELF+KV K LKE + YF Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGT 178
++ AV + H G+ HRD+KP KI+DFG S + + L+ T CGT
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 179 PAYVAPEVINRKGYDG--EKVDIWSCGVVLFVLLAGYLPFHDSNL-IEMYRKIGKAEFKC 235
P Y+APEV+ G G VD WS GV+LF+ L+GY PF + + + +I ++
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN- 238
Query: 236 PNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWFR-KGMNQKQKQKVTESK 286
F PEV L+ K+L +P R + + W + + M +K + ++E
Sbjct: 239 ---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEEN 295
Query: 287 DAASQDAGASAPQGS 301
++ + + P S
Sbjct: 296 ESTALPQVLAQPSTS 310
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 135/268 (50%), Gaps = 18/268 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-- 71
E + + ++LG+G+F KV+ A +TNQ A+K + KD ++ + D ++ + R++
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL---MDDDVECTMVEKRVLSL 73
Query: 72 --RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDF 128
HP + ++ TK +FFVMEY GG+L + K A Y ++I + F
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ---DGLLHTTCGTPAYVAPE 185
HS+G+ +RD+K KI+DFG+ CK D + CGTP Y+APE
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGM-----CKENMLGDAKTNXFCGTPDYIAPE 188
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
++ + Y+ VD WS GV+L+ +L G PFH + E++ I P W E +
Sbjct: 189 ILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
Query: 246 LLCKILDPNPSTRISM-AKIRESSWFRK 272
LL K+ P R+ + IR+ FR+
Sbjct: 248 LLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + K I+ WF
Sbjct: 275 VDLTKAFGNLKNGVNDIKNHKWF 297
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 21/277 (7%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
H T+ YEV +G G+++ TN AVK+IDK K D +
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK------RDPTEEIE 67
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLIN 124
++R +HPNI+ L +V ++ V E KGGEL +K+ + K E A +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITK 127
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGLLHTTCGTPA 180
V++ H++GV HRD+KP +I DFG + Q + ++GLL T C T
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLMTPCYTAN 185
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH---DSNLIEMYRKIGKAEFKCP- 236
+VAPEV+ R+GYD DIWS GV+L+ +L GY PF D E+ +IG +F
Sbjct: 186 FVAPEVLERQGYDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG 244
Query: 237 ---NWFPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
N + L+ K+L +P R++ A + W
Sbjct: 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G GTP Y+APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++++ + LG G+F +V + + A+K++DK K++++ + E +++ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR 132
P +V+L S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ +RD+KP +++DFG + K G CGTP +APE+I KGY
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEALAPEIILSKGY 215
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
+ + VD W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L
Sbjct: 216 N-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274
Query: 253 PNPSTRISMAK-----IRESSWF 270
+ + R K I+ WF
Sbjct: 275 VDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 4 MDHNKPSVLTEK-YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV-GLA-DQ 60
+D VL E YE+ ++G+GAF+ V + T Q AVK++D K GL+ +
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED 72
Query: 61 IKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAA 115
+KRE S+ +++HP+IV+L E ++ ++ V E+ G +L ++ K E A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXX---KISDFGLSALAQCKHQDGLL 172
Y +Q++ A+ +CH + HRD+KP K+ DFG++ Q +
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVA 190
Query: 173 HTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS--NLIEMYRKIGK 230
GTP ++APEV+ R+ Y G+ VD+W CGV+LF+LL+G LPF+ + L E K GK
Sbjct: 191 GGRVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK-GK 248
Query: 231 AEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
+ W + L+ ++L +P+ RI++ + W ++
Sbjct: 249 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
+ LG G+F +V + + A+K++DK K++++ + E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
S ++ VMEY GGE+F+ + + G+ E AR Y Q++ ++ HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVD 198
+KP +++DFG + K G GTP Y+APE+I KGY+ + VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLXGTPEYLAPEIILSKGYN-KAVD 220
Query: 199 IWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTR 258
W+ GV+++ + AGY PF I++Y KI + + P+ F +++ LL +L + + R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 259 ISMAK-----IRESSWF 270
K I+ WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 154/304 (50%), Gaps = 31/304 (10%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ------IK 62
P L ++Y + + LG GA +V A +T + VA+++I K K +G A + ++
Sbjct: 144 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFA-IGSAREADPALNVE 202
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQ 121
EI +++ + HP I+++ + + V+E +GGELF+KV K LKE + YF Q
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGT 178
++ AV + H G+ HRD+KP KI+DFG S + + L+ T CGT
Sbjct: 262 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 318
Query: 179 PAYVAPEVINRKGYDG--EKVDIWSCGVVLFVLLAGYLPFHDSNL-IEMYRKIGKAEFKC 235
P Y+APEV+ G G VD WS GV+LF+ L+GY PF + + + +I ++
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN- 377
Query: 236 PNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWFR-KGMNQKQKQKVTESK 286
F PEV L+ K+L +P R + + W + + M +K + ++E
Sbjct: 378 ---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEEN 434
Query: 287 DAAS 290
++ +
Sbjct: 435 ESTA 438
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 21/277 (7%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
H T+ YEV +G G+++ TN AVK+IDK K D +
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK------RDPTEEIE 67
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLIN 124
++R +HPNI+ L +V ++ V E KGGEL +K+ + K E A +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITK 127
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGLLHTTCGTPA 180
V++ H++GV HRD+KP +I DFG + Q + ++GLL T C T
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPCYTAN 185
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH---DSNLIEMYRKIGKAEFKCP- 236
+VAPEV+ R+GYD DIWS GV+L+ L GY PF D E+ +IG +F
Sbjct: 186 FVAPEVLERQGYDA-ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSG 244
Query: 237 ---NWFPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
N + L+ K L +P R++ A + W
Sbjct: 245 GYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
LG+G FAK + T + A K++ K +++ +++ EIS+ R + H ++V +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
+F V+E + L + K L E AR Y +Q++ + H V HRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
K KI DFGL+ + ++ T CGTP Y+APEV+++KG+ E VD+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE-VDV 200
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRI 259
WS G +++ LL G PF S L E Y +I K E+ P P L+ K+L +P+ R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 260 SMAKIRESSWFRKG 273
++ ++ +F G
Sbjct: 261 TINELLNDEFFTSG 274
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
LG+G FAK + T + A K++ K +++ +++ EIS+ R + H ++V +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
+F V+E + L + K L E AR Y +Q++ + H V HRD+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
K KI DFGL+ + ++ T CGTP Y+APEV+++KG+ E VD+
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE-VDV 204
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRI 259
WS G +++ LL G PF S L E Y +I K E+ P P L+ K+L +P+ R
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 264
Query: 260 SMAKIRESSWFRKG 273
++ ++ +F G
Sbjct: 265 TINELLNDEFFTSG 278
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
LG+G FAK + T + A K++ K +++ +++ EIS+ R + H ++V +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
+F V+E + L + K L E AR Y +Q++ + H V HRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
K KI DFGL+ + ++ T CGTP Y+APEV+++KG+ E VD+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE-VDV 200
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRI 259
WS G +++ LL G PF S L E Y +I K E+ P P L+ K+L +P+ R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 260 SMAKIRESSWFRKG 273
++ ++ +F G
Sbjct: 261 TINELLNDEFFTSG 274
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 31/298 (10%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ------IK 62
P L ++Y + + LG GA +V A +T + VA+++I K K +G A + ++
Sbjct: 130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFA-IGSAREADPALNVE 188
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQ 121
EI +++ + HP I+++ + + V+E +GGELF+KV K LKE + YF Q
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXX---XKISDFGLSALAQCKHQDGLLHTTCGT 178
++ AV + H G+ HRD+KP KI+DFG S + + L+ T CGT
Sbjct: 248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 304
Query: 179 PAYVAPEVINRKGYDG--EKVDIWSCGVVLFVLLAGYLPFHDSNL-IEMYRKIGKAEFKC 235
P Y+APEV+ G G VD WS GV+LF+ L+GY PF + + + +I ++
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN- 363
Query: 236 PNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWFR-KGMNQKQKQKVTE 284
F PEV L+ K+L +P R + + W + + M +K + ++E
Sbjct: 364 ---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSE 418
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 140/279 (50%), Gaps = 27/279 (9%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVID-------KDKIMRVGLADQIKREIS 66
+KY+ ++G+G + V T AVK+++ +++ V A +RE
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA--TRRETH 151
Query: 67 VMR-IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLIN 124
++R + HP+I+ L + + S +F V + + GELF+ + K L E R + L+
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYVA 183
AV F H+ + HRD+KP ++SDFG S C + G L CGTP Y+A
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS----CHLEPGEKLRELCGTPGYLA 267
Query: 184 PEVI------NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKC 235
PE++ GY G++VD+W+CGV+LF LLAG PF I M R I G+ +F
Sbjct: 268 PEILKCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326
Query: 236 PNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
P W V+ L+ ++L +P R++ + + +F +
Sbjct: 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
LG+G FAK + T + A K++ K +++ +++ EIS+ R + H ++V +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
+F V+E + L + K L E AR Y +Q++ + H V HRD+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
K KI DFGL+ + ++ CGTP Y+APEV+++KG+ E VD+
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDV 222
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRI 259
WS G +++ LL G PF S L E Y +I K E+ P P L+ K+L +P+ R
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 282
Query: 260 SMAKIRESSWFRKG 273
++ ++ +F G
Sbjct: 283 TINELLNDEFFTSG 296
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
LG+G FAK + T + A K++ K +++ +++ EIS+ R + H ++V +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
+F V+E + L + K L E AR Y +Q++ + H V HRD+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
K KI DFGL+ + ++ CGTP Y+APEV+++KG+ E VD+
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDV 198
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRI 259
WS G +++ LL G PF S L E Y +I K E+ P P L+ K+L +P+ R
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 258
Query: 260 SMAKIRESSWFRKG 273
++ ++ +F G
Sbjct: 259 TINELLNDEFFTSG 272
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
LG+G FAK + T + A K++ K +++ +++ EIS+ R + H ++V +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
+F V+E + L + K L E AR Y +Q++ + H V HRD+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
K KI DFGL+ + ++ CGTP Y+APEV+++KG+ E VD+
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDV 224
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRI 259
WS G +++ LL G PF S L E Y +I K E+ P P L+ K+L +P+ R
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 284
Query: 260 SMAKIRESSWFRKG 273
++ ++ +F G
Sbjct: 285 TINELLNDEFFTSG 298
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 145/282 (51%), Gaps = 15/282 (5%)
Query: 4 MDHNKPSVLTEK-YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV-GLA-DQ 60
+D VL E YE+ ++G+G F+ V + T Q AVK++D K GL+ +
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED 72
Query: 61 IKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAA 115
+KRE S+ +++HP+IV+L E ++ ++ V E+ G +L ++ K E A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHT- 174
Y +Q++ A+ +CH + HRD+KP G +A + GL+
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 175 TCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS--NLIEMYRKIGKAE 232
GTP ++APEV+ R+ Y G+ VD+W CGV+LF+LL+G LPF+ + L E K GK +
Sbjct: 193 RVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK-GKYK 250
Query: 233 FKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
W + L+ ++L +P+ RI++ + W ++
Sbjct: 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 140/269 (52%), Gaps = 14/269 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV-GLA-DQIKREISVMRIVRH 73
YE+ ++G+G F+ V + T Q AVK++D K GL+ + +KRE S+ +++H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAARRYFQQLINAVDF 128
P+IV+L E ++ ++ V E+ G +L ++ K E A Y +Q++ A+ +
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT-CGTPAYVAPEVI 187
CH + HRD+KP G +A + GL+ GTP ++APEV+
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS--NLIEMYRKIGKAEFKCPNW--FPPEV 243
R+ Y G+ VD+W CGV+LF+LL+G LPF+ + L E K GK + W
Sbjct: 208 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK-GKYKMNPRQWSHISESA 265
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRK 272
+ L+ ++L +P+ RI++ + W ++
Sbjct: 266 KDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E YEV +++G+GAF +V R T + A+K++ K ++++ + E +M
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRG 133
P +VQL+ ++ VMEY GG+L N ++ + E AR Y +++ A+D HS G
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK--- 190
HRD+KP K++DFG + + K T GTP Y++PEV+ +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI----GKAEFKCPNWFPPEVRKL 246
GY G + D WS GV L+ +L G PF+ +L+ Y KI F N E + L
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 247 LCKIL 251
+C L
Sbjct: 313 ICAFL 317
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E YEV +++G+GAF +V R T + A+K++ K ++++ + E +M
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRG 133
P +VQL+ ++ VMEY GG+L N ++ + E AR Y +++ A+D HS G
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK--- 190
HRD+KP K++DFG + + K T GTP Y++PEV+ +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI----GKAEFKCPNWFPPEVRKL 246
GY G + D WS GV L+ +L G PF+ +L+ Y KI F N E + L
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 247 LCKIL 251
+C L
Sbjct: 313 ICAFL 317
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E YEV +++G+GAF +V R T + A+K++ K ++++ + E +M
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRG 133
P +VQL+ ++ VMEY GG+L N ++ + E AR Y +++ A+D HS G
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK--- 190
HRD+KP K++DFG + + K T GTP Y++PEV+ +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI----GKAEFKCPNWFPPEVRKL 246
GY G + D WS GV L+ +L G PF+ +L+ Y KI F N E + L
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307
Query: 247 LCKIL 251
+C L
Sbjct: 308 ICAFL 312
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 130/259 (50%), Gaps = 15/259 (5%)
Query: 6 HNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI 65
H KPS + +++G+G+F KV AR AVKV+ K I++ I E
Sbjct: 34 HAKPS----DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 66 SVM-RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLI 123
+V+ + V+HP +V L+ T K++FV++Y GGELF + + + E AR Y ++
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIA 149
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCK---HQDGLLHTTCGTPA 180
+A+ + HS + +RD+KP ++DFGL CK + T CGTP
Sbjct: 150 SALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL-----CKENIEHNSTTSTFCGTPE 204
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFP 240
Y+APEV++++ YD VD W G VL+ +L G PF+ N EMY I +
Sbjct: 205 YLAPEVLHKQPYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNIT 263
Query: 241 PEVRKLLCKILDPNPSTRI 259
R LL +L + + R+
Sbjct: 264 NSARHLLEGLLQKDRTKRL 282
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 20/252 (7%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E Y+V +++G+GAF +V R + + A+K++ K ++++ + E +M
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSR 132
P +VQL+ ++ VMEY GG+L N ++ + E A+ Y +++ A+D HS
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQD--GLLH--TTCGTPAYVAPEVIN 188
G+ HRD+KP K++DFG C D G++H T GTP Y++PEV+
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFG-----TCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 189 RK---GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE--- 242
+ GY G + D WS GV LF +L G PF+ +L+ Y KI + K FP +
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI--MDHKNSLCFPEDAEI 306
Query: 243 ---VRKLLCKIL 251
+ L+C L
Sbjct: 307 SKHAKNLICAFL 318
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 16/274 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTPA+VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPAFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL- 246
N + G + D+WS GV+ ++LL+G PF E + ++ + + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 247 ---LCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+ ++L +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 14/223 (6%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-D 59
GM+ K + + Y++G LG G FA V R T A K I K + R G+ +
Sbjct: 1 GMETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE 60
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRY 118
+I+RE+S++R V HPNI+ L++V ++ + ++E GGELF+ +A K L E+ A +
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGL-LH 173
+Q+++ V++ H++ + H D+KP K+ DFGL+ + +DG+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFK 176
Query: 174 TTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
GTP +VAPE++N + G + D+WS GV+ ++LL+G PF
Sbjct: 177 NIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPF 218
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 137/280 (48%), Gaps = 28/280 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVID--------KDKIMRVGLADQIKREI 65
E YE +LG+G + V T + AVK+ID +++ L + +E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQE--LREATLKEV 74
Query: 66 SVMRIVR-HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLI 123
++R V HPNI+QL + T + F V + K GELF+ + K L E R+ + L+
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYV 182
+ H + HRD+KP K++DFG S C+ G L + CGTP+Y+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLRSVCGTPSYL 190
Query: 183 APEVI------NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFK 234
APE+I N GY G++VD+WS GV+++ LLAG PF + M R I G +F
Sbjct: 191 APEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 235 CPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
P W + V+ L+ + L P R + + +F++
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 188
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 248 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 281
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 16/268 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL- 246
N + G + D+WS GV+ ++LL+G PF E + ++ + + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 247 ---LCKILDPNPSTRISMAKIRESSWFR 271
+ ++L +P R+++ + W +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 188
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 248 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 281
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 28/280 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVID--------KDKIMRVGLADQIKREI 65
E YE +LG+G + V T + AVK+ID +++ L + +E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQE--LREATLKEV 74
Query: 66 SVMRIVR-HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLI 123
++R V HPNI+QL + T + F V + K GELF+ + K L E R+ + L+
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYV 182
+ H + HRD+KP K++DFG S C+ G L CGTP+Y+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLREVCGTPSYL 190
Query: 183 APEVI------NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFK 234
APE+I N GY G++VD+WS GV+++ LLAG PF + M R I G +F
Sbjct: 191 APEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 235 CPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
P W + V+ L+ + L P R + + +F++
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 24/272 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFR 271
+R+LL K +P R+++ + W +
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 136/274 (49%), Gaps = 16/274 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL- 246
N + G + D+WS GV+ ++LL+G PF E + ++ + + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 247 ---LCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+ ++L +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 24/272 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + ++E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFR 271
+R+LL K +P R+++ + W +
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIK 276
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 28/280 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVID--------KDKIMRVGLADQIKREI 65
E YE +LG+G + V T + AVK+ID +++ L + +E+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQE--LREATLKEV 61
Query: 66 SVMRIVR-HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLI 123
++R V HPNI+QL + T + F V + K GELF+ + K L E R+ + L+
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG-LLHTTCGTPAYV 182
+ H + HRD+KP K++DFG S C+ G L CGTP+Y+
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLREVCGTPSYL 177
Query: 183 APEVI------NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFK 234
APE+I N GY G++VD+WS GV+++ LLAG PF + M R I G +F
Sbjct: 178 APEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 236
Query: 235 CPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
P W + V+ L+ + L P R + + +F++
Sbjct: 237 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 16/262 (6%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-RHPNIVQL 79
+LG+G+F KV A T + A+K++ KD +++ + E V+ ++ + P + QL
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
+ T +++FVMEY GG+L + + GK KE A Y ++ + F H RG+ +RD
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRD 145
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQ--DGLL-HTTCGTPAYVAPEVINRKGYDGE 195
+K KI+DFG+ CK DG+ CGTP Y+APE+I + Y G+
Sbjct: 146 LKLDNVMLDSEGHIKIADFGM-----CKEHMMDGVTTREFCGTPDYIAPEIIAYQPY-GK 199
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNP 255
VD W+ GV+L+ +LAG PF + E+++ I + P E + ++ +P
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHP 259
Query: 256 STRISMA-----KIRESSWFRK 272
+ R+ +RE ++FR+
Sbjct: 260 AKRLGCGPEGERDVREHAFFRR 281
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 18/288 (6%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-D 59
GM+ K + + Y++G LG G FA V R T A K I K + R G++ +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRY 118
+I+RE+S++R V H N++ L++V ++ + ++E GGELF+ +A K L E+ A +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGL-LH 173
+Q+++ V++ H++ + H D+KP K+ DFGL+ + +DG+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFK 176
Query: 174 TTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF 233
GTP +VAPE++N + G + D+WS GV+ ++LL+G PF E I +
Sbjct: 177 NIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 234 KCPNWFPPEVRKL----LCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
F +L + K+L R+++ + W NQ+
Sbjct: 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 18/288 (6%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-D 59
GM+ K + + Y++G LG G FA V R T A K I K + R G++ +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRY 118
+I+RE+S++R V H N++ L++V ++ + ++E GGELF+ +A K L E+ A +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGL-LH 173
+Q+++ V++ H++ + H D+KP K+ DFGL+ + +DG+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFK 176
Query: 174 TTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF 233
GTP +VAPE++N + G + D+WS GV+ ++LL+G PF E I +
Sbjct: 177 NIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 234 KCPNWFPPEVRKL----LCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
F + +L + K+L R+++ + W NQ+
Sbjct: 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 24/278 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-DQIKREISVMRIVR 72
Y+ G LG G FA V R T A K I K K R G++ + I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVDFCHS 131
HPN++ L+EV K+ + + E GGELF+ +A K L E+ A + +Q++N V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 132 RGVYHRDIKPXXXXXXXXXX----XKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
+ H D+KP KI DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE----- 242
N + G + D+WS GV+ ++LL+G PF E + ++ + +
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 ---VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
+R+LL K +P R+++ + W + Q+
Sbjct: 249 KDFIRRLLVK----DPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 18/288 (6%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-D 59
GM+ K + + Y++G LG G FA V R T A K I K + R G++ +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRY 118
+I+RE+S++R V H N++ L++V ++ + ++E GGELF+ +A K L E+ A +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGL-LH 173
+Q+++ V++ H++ + H D+KP K+ DFGL+ + +DG+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFK 176
Query: 174 TTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF 233
GTP +VAPE++N + G + D+WS GV+ ++LL+G PF E I +
Sbjct: 177 NIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 234 KCPNWFPPEVRKL----LCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
F + +L + K+L R+++ + W NQ+
Sbjct: 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 18/288 (6%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-D 59
GM+ K + + Y++G LG G FA V R T A K I K + R G++ +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRY 118
+I+RE+S++R V H N++ L++V ++ + ++E GGELF+ +A K L E+ A +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGL-LH 173
+Q+++ V++ H++ + H D+KP K+ DFGL+ + +DG+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFK 176
Query: 174 TTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF 233
GTP +VAPE++N + G + D+WS GV+ ++LL+G PF E I +
Sbjct: 177 NIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 234 KCPNWFPPEVRKL----LCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
F +L + K+L R+++ + W NQ+
Sbjct: 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 18/288 (6%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLA-D 59
GM+ K + + Y++G LG G FA V R T A K I K + R G++ +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRY 118
+I+RE+S++R V H N++ L++V ++ + ++E GGELF+ +A K L E+ A +
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXX----XXKISDFGLSALAQCKHQDGL-LH 173
+Q+++ V++ H++ + H D+KP K+ DFGL+ + +DG+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFK 176
Query: 174 TTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF 233
GTP +VAPE++N + G + D+WS GV+ ++LL+G PF E I +
Sbjct: 177 NIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 234 KCPNWFPPEVRKL----LCKILDPNPSTRISMAKIRESSWFRKGMNQK 277
F +L + K+L R+++ + W NQ+
Sbjct: 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 154/295 (52%), Gaps = 34/295 (11%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
S+ + +++ R++G+G++AKV R +T++ A++V+ K+ + D ++ E V
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL-FNKVAKGKLKEDAARRYFQQLINAVD 127
+ HP +V L+ T+S++FFV+EY GG+L F+ + KL E+ AR Y ++ A++
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGL-----LHTTCGTPAYV 182
+ H RG+ +RD+K K++D+G+ CK +GL T CGTP Y+
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CK--EGLRPGDTTSTFCGTPNYI 220
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH--------DSNLIE-MYRKIGKAEF 233
APE++ + Y G VD W+ GV++F ++AG PF D N + +++ I + +
Sbjct: 221 APEILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
Query: 234 KCPNWFPPEVRKLLCKILDPNPSTRI------SMAKIRESSWFRK----GMNQKQ 278
+ P + +L L+ +P R+ A I+ +FR M QKQ
Sbjct: 280 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQ 334
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 152/293 (51%), Gaps = 30/293 (10%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
S+ + +++ R++G+G++AKV R +T++ A+KV+ K+ + D ++ E V
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL-FNKVAKGKLKEDAARRYFQQLINAVD 127
+ HP +V L+ T+S++FFV+EY GG+L F+ + KL E+ AR Y ++ A++
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT---CGTPAYVAP 184
+ H RG+ +RD+K K++D+G+ CK TT CGTP Y+AP
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CKEGLRPGDTTSXFCGTPNYIAP 175
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH--------DSNLIE-MYRKIGKAEFKC 235
E++ + Y G VD W+ GV++F ++AG PF D N + +++ I + + +
Sbjct: 176 EILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
Query: 236 PNWFPPEVRKLLCKILDPNPSTRI------SMAKIRESSWFRK----GMNQKQ 278
P + +L L+ +P R+ A I+ +FR M QKQ
Sbjct: 235 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQ 287
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 152/293 (51%), Gaps = 30/293 (10%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
S+ + +++ R++G+G++AKV R +T++ A+KV+ K+ + D ++ E V
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL-FNKVAKGKLKEDAARRYFQQLINAVD 127
+ HP +V L+ T+S++FFV+EY GG+L F+ + KL E+ AR Y ++ A++
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT---CGTPAYVAP 184
+ H RG+ +RD+K K++D+G+ CK TT CGTP Y+AP
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CKEGLRPGDTTSXFCGTPNYIAP 190
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH--------DSNLIE-MYRKIGKAEFKC 235
E++ + Y G VD W+ GV++F ++AG PF D N + +++ I + + +
Sbjct: 191 EILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 236 PNWFPPEVRKLLCKILDPNPSTRI------SMAKIRESSWFRK----GMNQKQ 278
P + +L L+ +P R+ A I+ +FR M QKQ
Sbjct: 250 PRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQ 302
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 150/289 (51%), Gaps = 30/289 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-RIVR 72
+ +++ R++G+G++AKV R +T++ A+KV+ K+ + D ++ E V +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL-FNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
HP +V L+ T+S++FFV+EY GG+L F+ + KL E+ AR Y ++ A+++ H
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT---CGTPAYVAPEVIN 188
RG+ +RD+K K++D+G+ CK TT CGTP Y+APE++
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFH--------DSNLIE-MYRKIGKAEFKCPNWF 239
+ Y G VD W+ GV++F ++AG PF D N + +++ I + + + P
Sbjct: 184 GEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 242
Query: 240 PPEVRKLLCKILDPNPSTRI------SMAKIRESSWFRK----GMNQKQ 278
+ +L L+ +P R+ A I+ +FR M QKQ
Sbjct: 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQ 291
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 9/261 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+KY +GQGA VY A + T Q VA++ ++ + + L I EI VMR ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKN 76
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRG 133
PNIV + +++ VMEY GG L + V + + E ++ + A++F HS
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD 193
V HRDIK K++DFG AQ + T GTP ++APEV+ RK Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAY- 193
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI---GKAEFKCPNWFPPEVRKLLCKI 250
G KVDIWS G++ ++ G P+ + N + I G E + P R L +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 251 LDPNPSTRISMAKIRESSWFR 271
LD + R S ++ + + +
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 142/314 (45%), Gaps = 54/314 (17%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD--QIKREISVMR 69
L +KY + +GQG++ V A +T A+K+++K+KI ++ D +IK E+ +M+
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKV------AKGKLKEDAAR------- 116
+ HPNI +LYEV + I VME GG L +K+ + GK D +
Sbjct: 84 KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143
Query: 117 ----------------------------RYFQQLINAVDFCHSRGVYHRDIKPXXX--XX 146
+Q+ +A+ + H++G+ HRDIKP
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203
Query: 147 XXXXXXKISDFGLSALAQCKHQDGLLH---TTCGTPAYVAPEVINRKGYD-GEKVDIWSC 202
K+ DFGLS K +G + T GTP +VAPEV+N G K D WS
Sbjct: 204 NKSFEIKLVDFGLSKEFY-KLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 203 GVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPNW--FPPEVRKLLCKILDPNPSTR 258
GV+L +LL G +PF N + ++ K F+ PN+ P R LL +L+ N R
Sbjct: 263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDER 322
Query: 259 ISMAKIRESSWFRK 272
+ + W +
Sbjct: 323 FDAMRALQHPWISQ 336
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 134/267 (50%), Gaps = 17/267 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E YEV +G G++ + R + + K +D M + E++++R ++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKH 64
Query: 74 PNIVQLYE--VMATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAARRYFQQLINAV 126
PNIV+ Y+ + T + ++ VMEY +GG+L + + KG L E+ R QL A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 127 DFCHSRG-----VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
CH R V HRD+KP K+ DFGL+ + H T GTP Y
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSFAKTFVGTPYY 182
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF-KCPNWFP 240
++PE +NR Y+ EK DIWS G +L+ L A PF + E+ KI + +F + P +
Sbjct: 183 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241
Query: 241 PEVRKLLCKILDPNPSTRISMAKIRES 267
E+ +++ ++L+ R S+ +I E+
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 20/267 (7%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVG-LADQIKREISVMRIVR- 72
+Y +G LLG+G F V+ + VA+KVI +++++ L+D + + V + +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 73 -----HPNIVQLYEVMATKSKIFFVMEYA-KGGELFNKVA-KGKLKEDAARRYFQQLINA 125
HP +++L + T+ V+E +LF+ + KG L E +R +F Q++ A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 126 VDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ CHSRGV HRDIK K+ DFG AL D GT Y P
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL----HDEPYTDFDGTRVYSPP 207
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVR 244
E I+R Y +WS G++L+ ++ G +PF E ++I +AE P P+
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAELHFPAHVSPDCC 261
Query: 245 KLLCKILDPNPSTRISMAKIRESSWFR 271
L+ + L P PS+R S+ +I W +
Sbjct: 262 ALIRRCLAPKPSSRPSLEEILLDPWMQ 288
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-RHPNIVQL 79
+LG+G+F KV + T++ AVK++ KD +++ + E V+ + + P + QL
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
+ T +++FVMEY GG+L + + G+ KE A Y ++ + F S+G+ +RD
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQ--DGLLHTT-CGTPAYVAPEVINRKGYDGE 195
+K KI+DFG+ CK DG+ CGTP Y+APE+I + Y G+
Sbjct: 147 LKLDNVMLDSEGHIKIADFGM-----CKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GK 200
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNP 255
VD W+ GV+L+ +LAG PF + E+++ I + P E + ++ +P
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP 260
Query: 256 STRISMA-----KIRESSWFR 271
R+ I+E ++FR
Sbjct: 261 GKRLGCGPEGERDIKEHAFFR 281
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-RHPNIVQL 79
+LG+G+F KV + T++ AVK++ KD +++ + E V+ + + P + QL
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
+ T +++FVMEY GG+L + + G+ KE A Y ++ + F S+G+ +RD
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQ--DGLLHTT-CGTPAYVAPEVINRKGYDGE 195
+K KI+DFG+ CK DG+ CGTP Y+APE+I + Y G+
Sbjct: 468 LKLDNVMLDSEGHIKIADFGM-----CKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GK 521
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNP 255
VD W+ GV+L+ +LAG PF + E+++ I + P E + ++ +P
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP 581
Query: 256 STRISMA-----KIRESSWFR 271
R+ I+E ++FR
Sbjct: 582 GKRLGCGPEGERDIKEHAFFR 602
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KY +GQGA VY A + T Q VA++ ++ + + L I EI VMR ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
NIV + +++ VMEY GG L + V + + E ++ + A++F HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRDIK K++DFG AQ + GTP ++APEV+ RK Y G
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSEMVGTPYWMAPEVVTRKAY-G 194
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI---GKAEFKCPNWFPPEVRKLLCKIL 251
KVDIWS G++ ++ G P+ + N + I G E + P R L + L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 252 DPNPSTRISMAKIRESSWFR 271
D + R S ++ + + +
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 23/292 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI----DKDKIMRVGLADQIKREISVMR 69
+ Y++ LG GAF V+ T + A K + + DK + +++EI M
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-------ETVRKEIQTMS 209
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA--KGKLKEDAARRYFQQLINAVD 127
++RHP +V L++ +++ + E+ GGELF KVA K+ ED A Y +Q+ +
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 128 FCHSRGVYHRDIKPXXX--XXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
H H D+KP K+ DFGL+A K + T GT + APE
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPE 326
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPN----WFPP 241
V K G D+WS GV+ ++LL+G PF N E R + ++ +
Sbjct: 327 VAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 385
Query: 242 EVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
+ + + K+L +P+TR+++ + E W G + ++ S+ +D+
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDS 437
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 23/292 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI----DKDKIMRVGLADQIKREISVMR 69
+ Y++ LG GAF V+ T + A K + + DK + +++EI M
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-------ETVRKEIQTMS 103
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA--KGKLKEDAARRYFQQLINAVD 127
++RHP +V L++ +++ + E+ GGELF KVA K+ ED A Y +Q+ +
Sbjct: 104 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 128 FCHSRGVYHRDIKPXXX--XXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
H H D+KP K+ DFGL+A K + T GT + APE
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPE 220
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPN----WFPP 241
V K G D+WS GV+ ++LL+G PF N E R + ++ +
Sbjct: 221 VAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 279
Query: 242 EVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQDA 293
+ + + K+L +P+TR+++ + E W G + ++ S+ +D+
Sbjct: 280 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDS 331
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 134/267 (50%), Gaps = 17/267 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E YEV +G G++ + R + + K +D M + E++++R ++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKH 64
Query: 74 PNIVQLYE--VMATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAARRYFQQLINAV 126
PNIV+ Y+ + T + ++ VMEY +GG+L + + KG L E+ R QL A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 127 DFCHSRG-----VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
CH R V HRD+KP K+ DFGL+ + H + GTP Y
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDEDFAKEFVGTPYY 182
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF-KCPNWFP 240
++PE +NR Y+ EK DIWS G +L+ L A PF + E+ KI + +F + P +
Sbjct: 183 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241
Query: 241 PEVRKLLCKILDPNPSTRISMAKIRES 267
E+ +++ ++L+ R S+ +I E+
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 17/267 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E YEV +G G++ + R + + K +D M + E++++R ++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKH 64
Query: 74 PNIVQLYE--VMATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAARRYFQQLINAV 126
PNIV+ Y+ + T + ++ VMEY +GG+L + + KG L E+ R QL A+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 127 DFCHSRG-----VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
CH R V HRD+KP K+ DFGL+ + H GTP Y
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDTSFAKAFVGTPYY 182
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF-KCPNWFP 240
++PE +NR Y+ EK DIWS G +L+ L A PF + E+ KI + +F + P +
Sbjct: 183 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241
Query: 241 PEVRKLLCKILDPNPSTRISMAKIRES 267
E+ +++ ++L+ R S+ +I E+
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 9/260 (3%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KY +GQGA VY A + T Q VA++ ++ + + L I EI VMR ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 78
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
NIV + +++ VMEY GG L + V + + E ++ + A++F HS V
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HR+IK K++DFG AQ + T GTP ++APEV+ RK Y G
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAY-G 195
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI---GKAEFKCPNWFPPEVRKLLCKIL 251
KVDIWS G++ ++ G P+ + N + I G E + P R L + L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 252 DPNPSTRISMAKIRESSWFR 271
+ + R S ++ + + +
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KY +GQGA VY A + T Q VA++ ++ + + L I EI VMR ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
NIV + +++ VMEY GG L + V + + E ++ + A++F HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRDIK K++DFG AQ + GTP ++APEV+ RK Y G
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVVTRKAY-G 194
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI---GKAEFKCPNWFPPEVRKLLCKIL 251
KVDIWS G++ ++ G P+ + N + I G E + P R L + L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 252 DPNPSTRISMAKIRESSWFR 271
+ + R S ++ + + +
Sbjct: 255 EMDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KY +GQGA VY A + T Q VA++ ++ + + L I EI VMR ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 78
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
NIV + +++ VMEY GG L + V + + E ++ + A++F HS V
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRDIK K++DFG AQ + GTP ++APEV+ RK Y G
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVVTRKAY-G 195
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI---GKAEFKCPNWFPPEVRKLLCKIL 251
KVDIWS G++ ++ G P+ + N + I G E + P R L + L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 252 DPNPSTRISMAKIRESSWFR 271
+ + R S ++ + + +
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD-----QIKREISV 67
++KY LG GAF V+ A N+ V VK I K+K++ + ++ EI++
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 68 MRIVRHPNIVQLYEVMATKSKIFFVME-YAKGGELFNKVAK-GKLKEDAARRYFQQLINA 125
+ V H NI+++ ++ + VME + G +LF + + +L E A F+QL++A
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V + + + HRDIK K+ DFG +A + + L +T CGT Y APE
Sbjct: 143 VGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE---RGKLFYTFCGTIEYCAPE 199
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
V+ Y G ++++WS GV L+ L+ F ++ E+ + +A P E+
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLV-----FEENPFCELEETV-EAAIHPPYLVSKELMS 253
Query: 246 LLCKILDPNPSTRISMAKIRESSWFRKGMN 275
L+ +L P P R ++ K+ W + +N
Sbjct: 254 LVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
+ + + +G+G F++VY A + VA+K + +M +EI +++ + HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAARRYFQQLINAVDFCH 130
+++ Y +++ V+E A G+L + K + E +YF QL +A++ H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
SR V HRDIKP K+ D GL K H+ GTP Y++PE I+
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHEN 211
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDS--NLIEMYRKIGKAEFK--CPNWFPPEVRKL 246
GY+ K DIWS G +L+ + A PF+ NL + +KI + ++ + + E+R+L
Sbjct: 212 GYNF-KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 270
Query: 247 LCKILDPNPSTR 258
+ ++P+P R
Sbjct: 271 VNMCINPDPEKR 282
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 25/287 (8%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
+LG G F +V+ T +A K+I K + +++K EISVM + H N++QLY
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKII---KTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 81 EVMATKSKIFFVMEYAKGGELFNKVAKG--KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
+ +K+ I VMEY GGELF+++ L E + +Q+ + H + H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 139 IKPXXX--XXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD--G 194
+KP KI DFGL+ + + + L GTP ++APEV+N YD
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVN---YDFVS 266
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNW----FPPEVRKLLCKI 250
D+WS GV+ ++LL+G PF N E I + + E ++ + K+
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL 326
Query: 251 LDPNPSTRISMAKIRESSWF------RKGMNQKQKQKVTESKDAASQ 291
L S RIS ++ + W + QK+K + ++++D ++
Sbjct: 327 LIKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKNRGSDAQDFVTK 373
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
EKY + +G+G+F K +S + +K I+ + M ++ +RE++V+ ++H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKH 82
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKV--AKGKL-KEDAARRYFQQLINAVDFCH 130
PNIVQ E ++ VM+Y +GG+LF ++ KG L +ED +F Q+ A+ H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
R + HRDIK ++ DFG++ + + L GTP Y++PE+ K
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENK 200
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPP-------EV 243
Y+ K DIW+ G VL+ L F ++ + KI FPP ++
Sbjct: 201 PYNN-KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS------FPPVSLHYSYDL 253
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRK 272
R L+ ++ NP R S+ I E + K
Sbjct: 254 RSLVSQLFKRNPRDRPSVNSILEKGFIAK 282
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 138/270 (51%), Gaps = 12/270 (4%)
Query: 4 MDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
+D P +L + Y +G+G+ V AR + + VAVK++D K R L +
Sbjct: 38 VDQGDPRLLLDSYVK---IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL---LFN 91
Query: 64 EISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI 123
E+ +MR +H N+V++Y+ +++ +ME+ +GG L + V++ +L E+ + ++
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL 151
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
A+ + H++GV HRDIK K+SDFG AQ GTP ++A
Sbjct: 152 QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMA 209
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKA---EFKCPNWFP 240
PEVI+R Y E VDIWS G+++ ++ G P+ + ++ +++ + + K +
Sbjct: 210 PEVISRSLYATE-VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVS 268
Query: 241 PEVRKLLCKILDPNPSTRISMAKIRESSWF 270
P +R L ++L +P R + ++ + +
Sbjct: 269 PVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 148/305 (48%), Gaps = 41/305 (13%)
Query: 3 GMDHNKPSVLTEKYEV-GRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLA-DQ 60
G + P + Y++ LLG+GA+AKV A S++ + AVK+I+K + G + +
Sbjct: 1 GSTDSLPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEK----QAGHSRSR 56
Query: 61 IKREISVMRIVR-HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRY 118
+ RE+ + + + NI++L E ++ + V E +GG + + K K E A R
Sbjct: 57 VFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRV 116
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQ-----DG 170
+ + A+DF H++G+ HRD+KP KI DF L + + +
Sbjct: 117 VRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 171 LLHTTCGTPAYVAPEVI----NRKGYDGEKVDIWSCGVVLFVLLAGYLPF---------- 216
L T CG+ Y+APEV+ ++ + ++ D+WS GVVL+++L+GY PF
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGW 236
Query: 217 --------HDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ L E ++ GK EF +W E + L+ K+L + R+S A++ +
Sbjct: 237 DRGEVCRVCQNKLFESIQE-GKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 267 SSWFR 271
W +
Sbjct: 296 HPWVQ 300
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ +E+ R +G+G+F KV + T + A+K ++K K + + +E+ +M+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARRYFQQLINAVDFCHSR 132
P +V L+ + +F V++ GG+L + + KE+ + + +L+ A+D+ ++
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
+ HRD+KP I+DF ++A+ + Q + T GT Y+APE+ + +
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKG 191
Query: 193 DGEK--VDIWSCGVVLFVLLAGYLPFH---DSNLIEMYRKIGKAEFKCPNWFPPEVRKLL 247
G VD WS GV + LL G P+H ++ E+ P+ + E+ LL
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLL 251
Query: 248 CKILDPNPSTRIS 260
K+L+PNP R S
Sbjct: 252 KKLLEPNPDQRFS 264
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 21 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 72
Query: 63 REISVM-RIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 73 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 132
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 133 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 189
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 248
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
++G+ EF P W EV+ L+ +L P+ R+++ + W
Sbjct: 249 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 11 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 62
Query: 63 REISV-MRIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 63 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 122
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 123 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 179
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 238
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++G+ EF P W EV+ L+ +L P+ R+++ + W + Q
Sbjct: 239 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 293
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 51 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 102
Query: 63 REISVM-RIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 162
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 163 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 219
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
++G+ EF P W EV+ L+ +L P+ R+++ + W
Sbjct: 279 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 12 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 63
Query: 63 REISV-MRIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 64 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 123
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 124 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 180
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 239
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++G+ EF P W EV+ L+ +L P+ R+++ + W + Q
Sbjct: 240 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 294
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 57 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 108
Query: 63 REISVM-RIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 109 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 168
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 169 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 225
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 284
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
++G+ EF P W EV+ L+ +L P+ R+++ + W
Sbjct: 285 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 7 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 58
Query: 63 REISV-MRIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 175
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++G+ EF P W EV+ L+ +L P+ R+++ + W + Q
Sbjct: 235 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 289
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 6 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 57
Query: 63 REISV-MRIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 58 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 117
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 118 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 174
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 233
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++G+ EF P W EV+ L+ +L P+ R+++ + W + Q
Sbjct: 234 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 288
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 13 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 64
Query: 63 REISV-MRIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 65 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 124
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 125 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 181
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 240
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++G+ EF P W EV+ L+ +L P+ R+++ + W + Q
Sbjct: 241 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 295
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 23/287 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+ LG GAF KVY A++ T A KVI+ L D I EI ++ H
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYI-VEIEILATCDH 67
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGE---LFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
P IV+L K++ ++E+ GG + ++ +G L E + +Q++ A++F H
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLH 126
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSA--LAQCKHQDGLLHTTCGTPAYVAPEVI- 187
S+ + HRD+K +++DFG+SA L + +D + GTP ++APEV+
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVM 182
Query: 188 ----NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNWFP 240
YD K DIWS G+ L + P H+ N + + KI K++ P+ +
Sbjct: 183 CETMKDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS 241
Query: 241 PEVRKLLCKILDPNPSTRISMAKIRESSWFRK-GMNQKQKQKVTESK 286
E R L LD NP TR S A++ E + N+ ++ V E+K
Sbjct: 242 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAK 288
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 5 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 56
Query: 63 REISV-MRIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 57 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 116
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 117 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 173
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++G+ EF P W EV+ L+ +L P+ R+++ + W + Q
Sbjct: 233 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 287
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 7 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 58
Query: 63 REISVM-RIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 175
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
++G+ EF P W EV+ L+ +L P+ R+++ + W
Sbjct: 235 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 23/287 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+ LG GAF KVY A++ T A KVI+ L D I EI ++ H
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIV-EIEILATCDH 75
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGE---LFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
P IV+L K++ ++E+ GG + ++ +G L E + +Q++ A++F H
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLH 134
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSA--LAQCKHQDGLLHTTCGTPAYVAPEVI- 187
S+ + HRD+K +++DFG+SA L + +D + GTP ++APEV+
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVM 190
Query: 188 ----NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNWFP 240
YD K DIWS G+ L + P H+ N + + KI K++ P+ +
Sbjct: 191 CETMKDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS 249
Query: 241 PEVRKLLCKILDPNPSTRISMAKIRESSWFRK-GMNQKQKQKVTESK 286
E R L LD NP TR S A++ E + N+ ++ V E+K
Sbjct: 250 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAK 296
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 140/276 (50%), Gaps = 19/276 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR---TNQSVAVKVIDKDKIM-RVGLADQIKREISVMR 69
E +E+ ++LG GA+ KV+ R I T + A+KV+ K I+ + + + E V+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 70 IVRH-PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA-KGKLKEDAARRYFQQLINAVD 127
+R P +V L+ T++K+ +++Y GGELF ++ + + E + Y +++ A++
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
H G+ +RDIK ++DFGLS + + CGT Y+AP+++
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIV 232
Query: 188 NRKGYDG--EKVDIWSCGVVLFVLLAGYLPF----HDSNLIEMYRKIGKAEFKCPNWFPP 241
R G G + VD WS GV+++ LL G PF ++ E+ R+I K+E P
Sbjct: 233 -RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 291
Query: 242 EVRKLLCKILDPNPSTRISMA-----KIRESSWFRK 272
+ L+ ++L +P R+ +I+E +F+K
Sbjct: 292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 123/234 (52%), Gaps = 13/234 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+ +++G+GAF +V + T + A+K+++K ++++ + E V+
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHS 131
I L+ ++ ++ VM+Y GG+L ++K KL ED AR Y +++ A+D H
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT--CGTPAYVAPEVI-- 187
HRDIKP +++DFG S L + DG + ++ GTP Y++PE++
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKM--NDDGTVQSSVAVGTPDYISPEILQA 250
Query: 188 --NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE--FKCPN 237
+ G G + D WS GV ++ +L G PF+ +L+E Y KI E F+ P+
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPS 304
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 123/234 (52%), Gaps = 13/234 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+ +++G+GAF +V + T + A+K+++K ++++ + E V+
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHS 131
I L+ ++ ++ VM+Y GG+L ++K KL ED AR Y +++ A+D H
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT--CGTPAYVAPEVI-- 187
HRDIKP +++DFG S L + DG + ++ GTP Y++PE++
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKM--NDDGTVQSSVAVGTPDYISPEILQA 266
Query: 188 --NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE--FKCPN 237
+ G G + D WS GV ++ +L G PF+ +L+E Y KI E F+ P+
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPS 320
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 23/285 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G PS L+++YE+G +LG G ++V+ AR +R ++ VAVKV+ D + +
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKI----FFVMEYAKGGELFNKV-AKGKLKEDAARR 117
RE + HP IV +Y+ ++ + VMEY G L + V +G + A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTC 176
A++F H G+ HRD+KP K+ DFG++ A+A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DSNLIEMYRKIGKAEFKC 235
GT Y++PE D + D++S G VL+ +L G PF DS + Y+ + +
Sbjct: 181 GTAQYLSPEQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE----- 234
Query: 236 PNWFPPEVRK---------LLCKILDPNPSTRISMAKIRESSWFR 271
+ PP R ++ K L NP R A + R
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 23/285 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G PS L+++YE+G +LG G ++V+ AR +R ++ VAVKV+ D + +
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKI----FFVMEYAKGGELFNKV-AKGKLKEDAARR 117
RE + HP IV +Y+ ++ + VMEY G L + V +G + A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTC 176
A++F H G+ HRD+KP K+ DFG++ A+A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DSNLIEMYRKIGKAEFKC 235
GT Y++PE D + D++S G VL+ +L G PF DS + Y+ + +
Sbjct: 181 GTAQYLSPEQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE----- 234
Query: 236 PNWFPPEVR---------KLLCKILDPNPSTRISMAKIRESSWFR 271
+ PP R ++ K L NP R A + R
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 23/285 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G PS L+++YE+G +LG G ++V+ AR +R ++ VAVKV+ D + +
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKI----FFVMEYAKGGELFNKV-AKGKLKEDAARR 117
RE + HP IV +Y+ ++ + VMEY G L + V +G + A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTC 176
A++F H G+ HRD+KP K+ DFG++ A+A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DSNLIEMYRKIGKAEFKC 235
GT Y++PE D + D++S G VL+ +L G PF DS + Y+ + +
Sbjct: 181 GTAQYLSPEQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE----- 234
Query: 236 PNWFPPEVRK---------LLCKILDPNPSTRISMAKIRESSWFR 271
+ PP R ++ K L NP R A + R
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 16/268 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKI-MRVG--LADQIKREISVMRIVR 72
+ V R++G+G F +VY R T + A+K +DK +I M+ G LA + +S++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
P IV + T K+ F+++ GG+L +++ G E R Y ++I ++ H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
R V +RD+KP +ISD GL+ C H + GT Y+APEV+ +
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHD---SNLIEMYRKIGKAEFKCPNWFPPEVRKLLC 248
D +S G +LF LL G+ PF + E+ R + P+ F PE+R LL
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 249 KILDPNPSTRISM-----AKIRESSWFR 271
+L + + R+ +++ES +FR
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 5 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 56
Query: 63 REISVM-RIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 57 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 116
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 117 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 173
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L C TP YVAPEV+ + YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
++G+ EF P W EV+ L+ +L P+ R+++ + W + Q
Sbjct: 233 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 287
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 16/268 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKI-MRVG--LADQIKREISVMRIVR 72
+ V R++G+G F +VY R T + A+K +DK +I M+ G LA + +S++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
P IV + T K+ F+++ GG+L +++ G E R Y ++I ++ H+
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
R V +RD+KP +ISD GL+ C H + GT Y+APEV+ +
Sbjct: 310 RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGV 365
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHD---SNLIEMYRKIGKAEFKCPNWFPPEVRKLLC 248
D +S G +LF LL G+ PF + E+ R + P+ F PE+R LL
Sbjct: 366 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 425
Query: 249 KILDPNPSTRISM-----AKIRESSWFR 271
+L + + R+ +++ES +FR
Sbjct: 426 GLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 16/268 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKI-MRVG--LADQIKREISVMRIVR 72
+ V R++G+G F +VY R T + A+K +DK +I M+ G LA + +S++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
P IV + T K+ F+++ GG+L +++ G E R Y ++I ++ H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
R V +RD+KP +ISD GL+ C H + GT Y+APEV+ +
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHD---SNLIEMYRKIGKAEFKCPNWFPPEVRKLLC 248
D +S G +LF LL G+ PF + E+ R + P+ F PE+R LL
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 249 KILDPNPSTRISM-----AKIRESSWFR 271
+L + + R+ +++ES +FR
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 16/268 (5%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKI-MRVG--LADQIKREISVMRIVR 72
+ V R++G+G F +VY R T + A+K +DK +I M+ G LA + +S++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHS 131
P IV + T K+ F+++ GG+L +++ G E R Y ++I ++ H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
R V +RD+KP +ISD GL+ C H + GT Y+APEV+ +
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHD---SNLIEMYRKIGKAEFKCPNWFPPEVRKLLC 248
D +S G +LF LL G+ PF + E+ R + P+ F PE+R LL
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 249 KILDPNPSTRISM-----AKIRESSWFR 271
+L + + R+ +++ES +FR
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 48/302 (15%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMR 69
S+ + YE+ ++G GA A V A + VA+K I+ +K D++ +EI M
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMS 68
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK----VAKGK-----LKEDAARRYFQ 120
HPNIV Y K +++ VM+ GG + + VAKG+ L E +
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 121 QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCK---HQDGLLHTTCG 177
+++ +++ H G HRD+K +I+DFG+SA ++ + T G
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 178 TPAYVAPEVINR-KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLI-------------- 222
TP ++APEV+ + +GYD K DIWS G+ L G P+H +
Sbjct: 189 TPCWMAPEVMEQVRGYDF-KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 223 -------EMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMN 275
EM +K GK+ RK++ L +P R + A++ +F+K N
Sbjct: 248 ETGVQDKEMLKKYGKS-----------FRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296
Query: 276 QK 277
++
Sbjct: 297 KE 298
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 126/285 (44%), Gaps = 23/285 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G PS L+++YE+G +LG G ++V+ AR +R ++ VAVKV+ D + +
Sbjct: 18 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 77
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKI----FFVMEYAKGGELFNKV-AKGKLKEDAARR 117
RE + HP IV +Y+ ++ + VMEY G L + V +G + A
Sbjct: 78 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 137
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTC 176
A++F H G+ HRD+KP K+ DFG++ A+A +
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DSNLIEMYRKIGKAEFKC 235
GT Y++PE D + D++S G VL+ +L G PF DS + Y+ + +
Sbjct: 198 GTAQYLSPEQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE----- 251
Query: 236 PNWFPPEVRK---------LLCKILDPNPSTRISMAKIRESSWFR 271
+ PP R ++ K L NP R A + R
Sbjct: 252 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 295
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 23/285 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G PS L+++YE+G +LG G ++V+ AR +R ++ VAVKV+ D + +
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKI----FFVMEYAKGGELFNKV-AKGKLKEDAARR 117
RE + HP IV +Y ++ + VMEY G L + V +G + A
Sbjct: 61 REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTC 176
A++F H G+ HRD+KP K+ DFG++ A+A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DSNLIEMYRKIGKAEFKC 235
GT Y++PE D + D++S G VL+ +L G PF DS + Y+ + +
Sbjct: 181 GTAQYLSPEQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE----- 234
Query: 236 PNWFPPEVR---------KLLCKILDPNPSTRISMAKIRESSWFR 271
+ PP R ++ K L NP R A + R
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 13/234 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +E+ +++G+GAF +V + ++ A+K+++K ++++ + E V+
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHS 131
I L+ + ++ VM+Y GG+L ++K +L E+ AR Y +++ A+D H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT--CGTPAYVAPEVINR 189
HRDIKP +++DFG S L +DG + ++ GTP Y++PE++
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFG-SCLKL--MEDGTVQSSVAVGTPDYISPEILQA 250
Query: 190 ----KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCPN 237
KG G + D WS GV ++ +L G PF+ +L+E Y KI K F+ P
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPT 304
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 13/225 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+ V A T + VAVK +D K R L + E+ +MR H N+V +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL---LFNEVVIMRDYHHDNVVDMYS 109
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+++ VME+ +GG L + V ++ E+ ++ A+ + H++GV HRDIK
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K+SDFG AQ + GTP ++APEVI+R Y G +VDIWS
Sbjct: 170 DSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPY-GTEVDIWS 226
Query: 202 CGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
G+++ ++ G P+ + ++ R+I + PP V+ L
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDS-------LPPRVKDL 264
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK----DKIMRVGLADQIKREISVMRIV 71
Y++ LG GAF V+ T + K I+ DK +K EIS+M +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT-------VKNEISIMNQL 105
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG--KLKEDAARRYFQQLINAVDFC 129
HP ++ L++ K ++ ++E+ GGELF+++A K+ E Y +Q +
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 130 HSRGVYHRDIKPXXX--XXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
H + H DIKP KI DFG LA + D ++ T T + APE++
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASSVKIIDFG---LATKLNPDEIVKVTTATAEFAAPEIV 222
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCP----NWFPPEV 243
+R+ G D+W+ GV+ +VLL+G PF + +E + + + +++ + PE
Sbjct: 223 DREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESK 286
+ + +L P R+++ E W KG + ++ S+
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWL-KGDHSNLTSRIPSSR 323
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 23/285 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G PS L+++YE+G +LG G ++V+ AR +R ++ VAVKV+ D + +
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 63 REISVMRIVRHPNIVQLYEVMATKSKI----FFVMEYAKGGELFNKV-AKGKLKEDAARR 117
RE + HP IV +Y+ ++ + VMEY G L + V +G + A
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTC 176
A++F H G+ HRD+KP K+ DFG++ A+A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DSNLIEMYRKIGKAEFKC 235
GT Y++PE D + D++S G VL+ +L G PF DS Y+ + +
Sbjct: 181 GTAQYLSPEQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE----- 234
Query: 236 PNWFPPEVRK---------LLCKILDPNPSTRISMAKIRESSWFR 271
+ PP R ++ K L NP R A + R
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 27/291 (9%)
Query: 1 MFGMDHNKPSVLTEKYEVGR-LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD 59
+F K +T+ Y++ + +LG G KV RT Q A+K++ R + D
Sbjct: 15 LFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEV-D 73
Query: 60 QIKREISVMRIVRHPNIVQLYEVMA-TKSKIFFVMEYAKGGELFNKVAK---GKLKEDAA 115
+ IV I+ +YE M K + +ME +GGELF+++ + E A
Sbjct: 74 HHWQASGGPHIV---CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREA 130
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLL 172
+ + A+ F HS + HRD+KP K++DFG + + L
Sbjct: 131 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNAL 186
Query: 173 HTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIE-----MYRK 227
T C TP YVAPEV+ + YD + D+WS GV++++LL G+ PF+ SN + M R+
Sbjct: 187 QTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFY-SNTGQAISPGMKRR 244
Query: 228 I--GKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGM 274
I G+ F P W + ++L+ +L +P+ R+++ + W + M
Sbjct: 245 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 27/284 (9%)
Query: 8 KPSVLTEKYEVGR-LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREIS 66
K +T+ Y++ + +LG G KV RT Q A+K++ R + D +
Sbjct: 3 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEV-DHHWQASG 61
Query: 67 VMRIVRHPNIVQLYEVMA-TKSKIFFVMEYAKGGELFNKVAK---GKLKEDAARRYFQQL 122
IV I+ +YE M K + +ME +GGELF+++ + E A + +
Sbjct: 62 GPHIV---CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 123 INAVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP 179
A+ F HS + HRD+KP K++DFG + + L T C TP
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTP 174
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIE-----MYRKI--GKAE 232
YVAPEV+ + YD + D+WS GV++++LL G+ PF+ SN + M R+I G+
Sbjct: 175 YYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFY-SNTGQAISPGMKRRIRLGQYG 232
Query: 233 FKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGM 274
F P W + ++L+ +L +P+ R+++ + W + M
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 276
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 177
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSXE 230
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 209
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 262
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 182
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 235
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 275
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 196
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 249
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 289
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMR 69
S+ + YE+ ++G GA A V A + VA+K I+ +K D++ +EI M
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMS 63
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNK----VAKGK-----LKEDAARRYFQ 120
HPNIV Y K +++ VM+ GG + + VAKG+ L E +
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 121 QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCK---HQDGLLHTTCG 177
+++ +++ H G HRD+K +I+DFG+SA ++ + T G
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 178 TPAYVAPEVINR-KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLI-------------- 222
TP ++APEV+ + +GYD K DIWS G+ L G P+H +
Sbjct: 184 TPCWMAPEVMEQVRGYDF-KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 223 -------EMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
EM +K GK+ RK++ L +P R + A++ +F+K
Sbjct: 243 ETGVQDKEMLKKYGKS-----------FRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 182
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 235
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 275
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 181
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 234
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 235 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 274
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 182
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 235
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 275
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 177
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 230
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 197
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 250
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 290
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 224
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 277
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 317
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 196
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSXE 249
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 289
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 181
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 234
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 235 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 274
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 160
Query: 125 AVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 216
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 217 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 269
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 270 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 309
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 197
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSXE 250
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 290
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 180
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 181 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 233
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 234 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 273
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 224
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSXE 277
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 317
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+ V A + + VAVK +D K R L + E+ +MR +H N+V++Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYN 84
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+++ VME+ +GG L + V ++ E+ ++ A+ H++GV HRDIK
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K+SDFG AQ + GTP ++APE+I+R Y G +VDIWS
Sbjct: 145 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 201
Query: 202 CGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTR 258
G+++ ++ G P+ + ++M R K + P ++ L ++L +P+ R
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 261
Query: 259 ISMAKIRESSWFRKG 273
+ A++ + + K
Sbjct: 262 ATAAELLKHPFLAKA 276
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 204
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 205 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSXE 257
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 258 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 297
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 210
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSSE 263
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 125 AVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 229
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 230 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSXE 282
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 283 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 322
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+ V A + + VAVK +D K R L + E+ +MR +H N+V++Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYN 93
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+++ VME+ +GG L + V ++ E+ ++ A+ H++GV HRDIK
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K+SDFG AQ + GTP ++APE+I+R Y G +VDIWS
Sbjct: 154 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 210
Query: 202 CGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTR 258
G+++ ++ G P+ + ++M R K + P ++ L ++L +P+ R
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 270
Query: 259 ISMAKIRESSWFRKG 273
+ A++ + + K
Sbjct: 271 ATAAELLKHPFLAKA 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 209
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSSE 262
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 210
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSSE 263
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 209
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSSE 262
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 177
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSSE 230
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+ V A + + VAVK +D K R L + E+ +MR +H N+V++Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYN 88
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+++ VME+ +GG L + V ++ E+ ++ A+ H++GV HRDIK
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K+SDFG AQ + GTP ++APE+I+R Y G +VDIWS
Sbjct: 149 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 205
Query: 202 CGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTR 258
G+++ ++ G P+ + ++M R K + P ++ L ++L +P+ R
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 265
Query: 259 ISMAKIRESSWFRKG 273
+ A++ + + K
Sbjct: 266 ATAAELLKHPFLAKA 280
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+ V A + + VAVK +D K R L + E+ +MR +H N+V++Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYN 95
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+++ VME+ +GG L + V ++ E+ ++ A+ H++GV HRDIK
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K+SDFG AQ + GTP ++APE+I+R Y G +VDIWS
Sbjct: 156 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 212
Query: 202 CGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTR 258
G+++ ++ G P+ + ++M R K + P ++ L ++L +P+ R
Sbjct: 213 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 272
Query: 259 ISMAKIRESSWFRKG 273
+ A++ + + K
Sbjct: 273 ATAAELLKHPFLAKA 287
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 210
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSXE 263
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 210
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSXE 263
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 303
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 209
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-----GQVFFR--QRVSXE 262
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 302
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+ V A + + VAVK +D K R L + E+ +MR +H N+V++Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYN 138
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+++ VME+ +GG L + V ++ E+ ++ A+ H++GV HRDIK
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K+SDFG AQ + GTP ++APE+I+R Y G +VDIWS
Sbjct: 199 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 255
Query: 202 CGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTR 258
G+++ ++ G P+ + ++M R K + P ++ L ++L +P+ R
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 315
Query: 259 ISMAKIRESSWFRKG 273
+ A++ + + K
Sbjct: 316 ATAAELLKHPFLAKA 330
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 31/295 (10%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K + + +
Sbjct: 51 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQD--------CPKAR 102
Query: 63 REISVM-RIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + V E GGELF+++ E
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTERE 162
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXX---XXXXXXXXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG A H
Sbjct: 163 ASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNS-- 219
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
L T C TP YVAPEV+ + YD + D WS GV+ ++LL GY PF+ ++ + +
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYD-KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTR 278
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQ 278
+ G+ EF P W EV+ L+ +L P+ R ++ + W + Q
Sbjct: 279 IRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQ 333
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+ V A + + VAVK +D K R L + E+ +MR +H N+V++Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYN 215
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+++ VME+ +GG L + V ++ E+ ++ A+ H++GV HRDIK
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K+SDFG AQ + GTP ++APE+I+R Y G +VDIWS
Sbjct: 276 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWS 332
Query: 202 CGVVLFVLLAGYLPFHDS---NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTR 258
G+++ ++ G P+ + ++M R K + P ++ L ++L +P+ R
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 392
Query: 259 ISMAKIRESSWFRKG 273
+ A++ + + K
Sbjct: 393 ATAAELLKHPFLAKA 407
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G F VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 197
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSXE 250
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L P R + +I+ W + + ++ ++
Sbjct: 251 CQHLIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQETAEI 290
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 20/289 (6%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
+E+ LG GAF KVY A++ T+ A KVID L D + EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VEIDILASCDHPN 95
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLINAVDFCHSRG 133
IV+L + ++ ++ ++E+ GG + + + + L E + +Q ++A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSA--LAQCKHQDGLLHTTCGTPAYVAPEVI---- 187
+ HRD+K K++DFG+SA + +D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI----GTPYWMAPEVVMCET 211
Query: 188 -NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNWFPPEV 243
+ YD K D+WS G+ L + P H+ N + + KI K+E P+ +
Sbjct: 212 SKDRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQD 292
+ L K L+ N R + +++ + + N+ ++ + E+K +++
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTEE 319
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 20/289 (6%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
+E+ LG GAF KVY A++ T+ A KVID L D + EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VEIDILASCDHPN 95
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLINAVDFCHSRG 133
IV+L + ++ ++ ++E+ GG + + + + L E + +Q ++A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSA--LAQCKHQDGLLHTTCGTPAYVAPEVI---- 187
+ HRD+K K++DFG+SA + +D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI----GTPYWMAPEVVMCET 211
Query: 188 -NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNWFPPEV 243
+ YD K D+WS G+ L + P H+ N + + KI K+E P+ +
Sbjct: 212 SKDRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQD 292
+ L K L+ N R + +++ + + N+ ++ + E+K +++
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTEE 319
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 22/274 (8%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F +V+ RT + VA+K+ID ++ Q +EI+V+ P + + Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 92
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+K++ +MEY GG + + G L E ++++ +D+ HS HRDIK
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKA 152
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K++DFG++ Q +T GTP ++APEVI + YD K DIWS
Sbjct: 153 ANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS-KADIWS 209
Query: 202 CGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE--------VRKLLCKILDP 253
G+ L G P S L M K F P PP +++ + L+
Sbjct: 210 LGITAIELARGEPPH--SELHPM-----KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK 262
Query: 254 NPSTRISMAKIRESSWFRKGMNQKQKQKVTESKD 287
PS R + ++ + + + N K+ +TE D
Sbjct: 263 EPSFRPTAKELLKHKFILR--NAKKTSYLTELID 294
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 27/295 (9%)
Query: 3 GMDHN--KPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQ 60
GM +N P L K E +G+G+F +V+ RT Q VA+K+ID ++ Q
Sbjct: 13 GMQNNIADPEELFTKLE---RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ 69
Query: 61 IKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ 120
+EI+V+ + + Y SK++ +MEY GG + + G E +
Sbjct: 70 --QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK 127
Query: 121 QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA 180
+++ +D+ HS HRDIK K++DFG++ Q +T GTP
Sbjct: 128 EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPF 185
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFP 240
++APEVI + YD K DIWS G+ L G P D + + + F P P
Sbjct: 186 WMAPEVIQQSAYD-SKADIWSLGITAIELAKGEPPNSDMHPMRVL-------FLIPKNNP 237
Query: 241 PEV--------RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKD 287
P + ++ + L+ +PS R + ++ + + K N K+ +TE D
Sbjct: 238 PTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVK--NSKKTSYLTELID 290
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 20/289 (6%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
+E+ LG GAF KVY A++ T+ A KVID L D + EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VEIDILASCDHPN 95
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLINAVDFCHSRG 133
IV+L + ++ ++ ++E+ GG + + + + L E + +Q ++A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSA--LAQCKHQDGLLHTTCGTPAYVAPEVI---- 187
+ HRD+K K++DFG+SA + +D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI----GTPYWMAPEVVMCET 211
Query: 188 -NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNWFPPEV 243
+ YD K D+WS G+ L + P H+ N + + KI K+E P+ +
Sbjct: 212 SKDRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 244 RKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAASQD 292
+ L K L+ N R + +++ + + N+ ++ + E+K +++
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTEE 319
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 22/274 (8%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F +V+ RT + VA+K+ID ++ Q +EI+V+ P + + Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+K++ +MEY GG + + G L E ++++ +D+ HS HRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKA 132
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K++DFG++ Q +T GTP ++APEVI + YD K DIWS
Sbjct: 133 ANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS-KADIWS 189
Query: 202 CGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE--------VRKLLCKILDP 253
G+ L G P S L M K F P PP +++ + L+
Sbjct: 190 LGITAIELARGEPPH--SELHPM-----KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK 242
Query: 254 NPSTRISMAKIRESSWFRKGMNQKQKQKVTESKD 287
PS R + ++ + + + N K+ +TE D
Sbjct: 243 EPSFRPTAKELLKHKFILR--NAKKTSYLTELID 274
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 19/262 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ +E+ +++G+GAF++V + +T Q A+K+++K +++ G + E V+
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHS 131
I QL+ ++ ++ VMEY GG+L ++K ++ + AR Y +++ A+D H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHT--TCGTPAYVAPEVIN- 188
G HRDIKP +++DFG S L DG + + GTP Y++PE++
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFG-SCLKL--RADGTVRSLVAVGTPDYLSPEILQA 237
Query: 189 -----RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI--GKAEFKCP---NW 238
G G + D W+ GV + + G PF+ + E Y KI K P
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEG 297
Query: 239 FPPEVRKLLCKILDPNPSTRIS 260
P E R + ++L P P TR+
Sbjct: 298 VPEEARDFIQRLLCP-PETRLG 318
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F +V+ RT + VA+K+ID ++ Q +EI+V+ P + + Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 87
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+K++ +MEY GG + + G L E ++++ +D+ HS HRDIK
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKA 147
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K++DFG++ Q + GTP ++APEVI + YD K DIWS
Sbjct: 148 ANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS-KADIWS 204
Query: 202 CGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE--------VRKLLCKILDP 253
G+ L G P S L M K F P PP +++ + L+
Sbjct: 205 LGITAIELARGEPPH--SELHPM-----KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK 257
Query: 254 NPSTRISMAKIRESSWFRKGMNQKQKQKVTESKD 287
PS R + ++ + + + N K+ +TE D
Sbjct: 258 EPSFRPTAKELLKHKFILR--NAKKTSYLTELID 289
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F +V+ RT + VA+K+ID ++ Q +EI+V+ P + + Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+K++ +MEY GG + + G L E ++++ +D+ HS HRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKA 132
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K++DFG++ Q + GTP ++APEVI + YD K DIWS
Sbjct: 133 ANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS-KADIWS 189
Query: 202 CGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPE--------VRKLLCKILDP 253
G+ L G P S L M K F P PP +++ + L+
Sbjct: 190 LGITAIELARGEPPH--SELHPM-----KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK 242
Query: 254 NPSTRISMAKIRESSWFRKGMNQKQKQKVTESKD 287
PS R + ++ + + + N K+ +TE D
Sbjct: 243 EPSFRPTAKELLKHKFILR--NAKKTSYLTELID 274
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 38/285 (13%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR-HPNIVQL 79
+LG+GA A+V ++ T+Q AVK+I+K + ++ RE+ ++ + H N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVEMLYQCQGHRNVLEL 76
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
E + + + V E +GG + + + K + E A Q + +A+DF H++G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 139 IKPXXXXXX---XXXXXKISDFGLSAL----AQCKH-QDGLLHTTCGTPAYVAPEVINRK 190
+KP KI DFGL + C L T CG+ Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 191 G-----YDGEKVDIWSCGVVLFVLLAGYLPF-----------------HDSNLIEMYRKI 228
YD ++ D+WS GV+L++LL+GY PF N++ +
Sbjct: 197 SEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 229 GKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFR 271
GK EF +W + L+ K+L + R+S A++ + W +
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
EKY +G+G + VY A++ ++ A+K I +K G+ REIS+++ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK-EDEGIPSTTIREISILKELKH 59
Query: 74 PNIVQLYEVMATKSKIFFVMEYA-KGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSR 132
NIV+LY+V+ TK ++ V E+ + + V +G L+ A+ + QL+N + +CH R
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLS---ALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
V HRD+KP KI+DFGL+ + K+ ++ T Y AP+V+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-----TLWYRAPDVLMG 174
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF----HDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
+DIWS G + ++ G F L+ ++R +G K NW P V +
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK--NW--PNVTE 230
Query: 246 -----------------------------LLCKILDPNPSTRISMAKIRESSWFRK 272
LL K+L +P+ RI+ + E ++F++
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
EKY +G+G + VY A++ ++ A+K I +K G+ REIS+++ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK-EDEGIPSTTIREISILKELKH 59
Query: 74 PNIVQLYEVMATKSKIFFVMEYA-KGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSR 132
NIV+LY+V+ TK ++ V E+ + + V +G L+ A+ + QL+N + +CH R
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLS-----ALAQCKHQDGLLHTTCGTPAYVAPEVI 187
V HRD+KP KI+DFGL+ + + H+ T Y AP+V+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAPDVL 172
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPF----HDSNLIEMYRKIGKAEFKCPNWFPPEV 243
+DIWS G + ++ G F L+ ++R +G K NW P V
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK--NW--PNV 228
Query: 244 RK-----------------------------LLCKILDPNPSTRISMAKIRESSWFRK 272
+ LL K+L +P+ RI+ + E ++F++
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 136/298 (45%), Gaps = 52/298 (17%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
EKY +G+G + VY A++ ++ A+K I +K G+ REIS+++ ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK-EDEGIPSTTIREISILKELKH 59
Query: 74 PNIVQLYEVMATKSKIFFVMEYA-KGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSR 132
NIV+LY+V+ TK ++ V E+ + + V +G L+ A+ + QL+N + +CH R
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 133 GVYHRDIKPXXXXXXXXXXXKISDFGLS-----ALAQCKHQDGLLHTTCGTPAYVAPEVI 187
V HRD+KP KI+DFGL+ + + H+ T Y AP+V+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAPDVL 172
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPF----HDSNLIEMYRKIGKAEFKCPNWFPPEV 243
+DIWS G + ++ G F L+ ++R +G K NW P V
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSK--NW--PNV 228
Query: 244 RK-----------------------------LLCKILDPNPSTRISMAKIRESSWFRK 272
+ LL K+L +P+ RI+ + E ++F++
Sbjct: 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 45/285 (15%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVI--DKDKIMRVGLADQIKREISVMRIVRH----- 73
+LGQGAF +V AR+ ++ A+K I ++K+ + + ++ +VR+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 74 --PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE--DAARRYFQQLINAVDFC 129
N V+ + KS +F MEY + G L++ + L + D R F+Q++ A+ +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA-------LAQCKHQD-----GLLHTTCG 177
HS+G+ HRD+KP KI DFGL+ + + Q+ L + G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS----NLIEMYRKIGKAEF 233
T YVA EV++ G+ EK+D++S G++ F ++ PF N+++ R +
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSIE-- 247
Query: 234 KCPNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWF 270
FPP+ +K++ ++D +P+ R + S W
Sbjct: 248 -----FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
P V E ++ +G+G + VY AR+ T + VA+K I D G+ REIS++
Sbjct: 2 PLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLL 60
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAV 126
+ + HPNIV+L +V+ T++K++ V E+ + + A + + Y QL+ +
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEV 186
FCHS V HRD+KP K++DFGL A A H T Y APE+
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEI 178
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------ 230
+ Y VDIWS G + ++ F + L ++R +G
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 231 AEFK--CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
++K P W PP + R LL ++L +P+ RIS
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 281
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 68
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGXK 186
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 284
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGXK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 38/285 (13%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR-HPNIVQL 79
+LG+GA A+V ++ T+Q AVK+I+K + ++ RE+ ++ + H N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVEMLYQCQGHRNVLEL 76
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
E + + + V E +GG + + + K + E A Q + +A+DF H++G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 139 IKPXXXXXX---XXXXXKISDF----GLSALAQCKH-QDGLLHTTCGTPAYVAPEVINRK 190
+KP KI DF G+ C L T CG+ Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 191 G-----YDGEKVDIWSCGVVLFVLLAGYLPF-----------------HDSNLIEMYRKI 228
YD ++ D+WS GV+L++LL+GY PF N++ +
Sbjct: 197 SEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 229 GKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWFR 271
GK EF +W + L+ K+L + R+S A++ + W +
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F +VY T + VA+K+ID ++ Q +EI+V+ P I + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYFG 84
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
+K++ +MEY GG + + G L+E ++++ +D+ HS HRDIK
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKA 144
Query: 142 XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWS 201
K++DFG++ Q + GTP ++APEVI + YD K DIWS
Sbjct: 145 ANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF-KADIWS 201
Query: 202 CGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEV 243
G+ L G P +S+L M + F P PP +
Sbjct: 202 LGITAIELAKGEPP--NSDLHPM-----RVLFLIPKNSPPTL 236
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 64
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 63
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 62
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 180
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 62
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 62
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 62
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH-PNIVQLY 80
LG+G FA V S T Q A K + K + + A +I EI+V+ + + P ++ L+
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA-EILHEIAVLELAKSCPRVINLH 95
Query: 81 EVMATKSKIFFVMEYAKGGELFN----KVAKGKLKEDAARRYFQQLINAVDFCHSRGVYH 136
EV S+I ++EYA GGE+F+ ++A+ + E+ R +Q++ V + H + H
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 137 RDIKPXXXXXXXXX---XXKISDFGLSALA--QCKHQDGLLHTTCGTPAYVAPEVINRKG 191
D+KP KI DFG+S C+ L GTP Y+APE++N
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-----LREIMGTPEYLAPEILN--- 206
Query: 192 YD--GEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL--- 246
YD D+W+ G++ ++LL PF + E Y I + V +L
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATD 266
Query: 247 -LCKILDPNPSTRISMAKIRESSWFRK-------------GMNQKQKQKVTESKDAASQD 292
+ +L NP R + SW ++ +Q Q V S+D S+
Sbjct: 267 FIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDKTSKS 326
Query: 293 A 293
+
Sbjct: 327 S 327
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 63
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 62
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRISMAKIRESSWFR 271
P W PP + R LL ++L +P+ RIS +F+
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 64
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 63
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 68
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 186
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRISMAKIRESSWFR 271
P W PP + R LL ++L +P+ RIS +F+
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 64
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 65
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 183
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 281
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 63
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 64
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRISMAKIRESSWFR 271
P W PP + R LL ++L +P+ RIS +F+
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 64
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 64
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + A + + Y QL+ + FCHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+K I D G+ REIS+++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + A + + Y QL+ + FCHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL C+H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGL-----CRHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 28/247 (11%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI-----DKDKIMRVGLADQIKREI 65
++ E+Y++ LG G + VY A N VA+K I +K++ ++ + +RE+
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK-----RFEREV 62
Query: 66 SVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKV-AKGKLKEDAARRYFQQLIN 124
+ H NIV + +V + VMEY +G L + + G L D A + Q+++
Sbjct: 63 HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILD 122
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGL------SALAQCKHQDGLLHTTCGT 178
+ H + HRDIKP KI DFG+ ++L Q H GT
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH-------VLGT 175
Query: 179 PAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNW 238
Y +PE + D E DI+S G+VL+ +L G PF+ + + I + PN
Sbjct: 176 VQYFSPEQAKGEATD-ECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPN- 231
Query: 239 FPPEVRK 245
+VRK
Sbjct: 232 VTTDVRK 238
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 17/234 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++V LG+G++ VY A T Q VA+K + + ++ +I +EIS+M+
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-----EIIKEISIMQQCDS 83
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFN--KVAKGKLKEDAARRYFQQLINAVDFCHS 131
P++V+ Y + ++ VMEY G + + ++ L ED Q + +++ H
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF 143
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
HRDIK K++DFG++ Q + GTP ++APEVI G
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
Y+ DIWS G+ + G P+ D + + +A F P PP RK
Sbjct: 202 YNC-VADIWSLGITAIEMAEGKPPYADIHPM-------RAIFMIPTNPPPTFRK 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVI--DKDKIMRVGLADQIKREISVMRIVRH----- 73
+LGQGAF +V AR+ ++ A+K I ++K+ + + ++ +VR+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 74 --PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE--DAARRYFQQLINAVDFC 129
N V+ + KS +F MEY + L++ + L + D R F+Q++ A+ +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA-------LAQCKHQD-----GLLHTTCG 177
HS+G+ HRD+KP KI DFGL+ + + Q+ L + G
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS----NLIEMYRKIGKAEF 233
T YVA EV++ G+ EK+D++S G++ F ++ PF N+++ R +
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSIE-- 247
Query: 234 KCPNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWF 270
FPP+ +K++ ++D +P+ R + S W
Sbjct: 248 -----FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 20 RLLGQ-GAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
++G+ G F KVY A++ T+ A KVID L D + EI ++ HPNIV+
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VEIDILASCDHPNIVK 71
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLINAVDFCHSRGVYH 136
L + ++ ++ ++E+ GG + + + + L E + +Q ++A+++ H + H
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 137 RDIKPXXXXXXXXXXXKISDFGLSA---LAQCKHQDGLLHTTCGTPAYVAPEVI-----N 188
RD+K K++DFG+SA + +D + GTP ++APEV+
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI----GTPYWMAPEVVMCETSK 187
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNWFPPEVRK 245
+ YD K D+WS G+ L + P H+ N + + KI K+E P+ + +
Sbjct: 188 DRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD 246
Query: 246 LLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESK 286
L K L+ N R + +++ + + N+ ++ + E+K
Sbjct: 247 FLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAK 287
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+ I D G+ REIS+++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ +G+G + VY AR+ T + VA+ I D G+ REIS+++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNIV+L +V+ T++K++ V E+ + + A + + Y QL+ + FCHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
V HRD+KP K++DFGL A A H T Y APE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 178
Query: 192 YDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK------------AEFK- 234
Y VDIWS G + ++ F + L ++R +G ++K
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 235 -CPNW--------FPP---EVRKLLCKILDPNPSTRIS 260
P W PP + R LL ++L +P+ RIS
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G +A VY + T VA+K + D G REIS+M+ ++H NIV+LY+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR-------RYFQ-QLINAVDFCHSRG 133
V+ T++K+ V E+ K + + R +YFQ QL+ + FCH
Sbjct: 71 VIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD 193
+ HRD+KP K+ DFGL+ + T Y AP+V+
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAPDVLMGSRTY 186
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+DIWSCG +L ++ G F +N
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPGTN 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVG-LADQIKREISVMRIVRHPNIVQL 79
++G G F KVY R+ VAVK D + + +++E + +++HPNI+ L
Sbjct: 14 IIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVY--- 135
V + + VME+A+GG L N+V GK + D + Q+ +++ H +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 136 HRDIKPXXXXX--------XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HRD+K KI+DFG LA+ H+ + + G A++APEVI
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFG---LAREWHRTTKM-SAAGAYAWMAPEVI 186
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFH--DSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
R + D+WS GV+L+ LL G +PF D + + K P+ P K
Sbjct: 187 -RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAK 245
Query: 246 LLCKILDPNPSTRISMAKI 264
L+ +P+P +R S I
Sbjct: 246 LMEDCWNPDPHSRPSFTNI 264
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 11/217 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI---DKDKIMRVGLADQIKREISVMRI 70
EKYE L+G+G++ V R+ T + VA+K D DK+++ REI +++
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK----KIAMREIKLLKQ 80
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGELFN-KVAKGKLKEDAARRYFQQLINAVDFC 129
+RH N+V L EV K + + V E+ L + ++ L ++Y Q+IN + FC
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
HS + HRDIKP K+ DFG + + + T Y APE++
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVG 198
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMY 225
G+ VD+W+ G ++ + G F DS++ ++Y
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 22/276 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYY---ARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
L EKY + LG+G F V+ S +T + VKV D+++ +K+EIS++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-------VKKEISIL 55
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG--KLKEDAARRYFQQLINAV 126
I RH NI+ L+E + ++ + E+ G ++F ++ +L E Y Q+ A+
Sbjct: 56 NIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG--LLHTTCGTPAYVAP 184
F HS + H DI+P I Q K D LL T P Y AP
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT---APEYYAP 172
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEF----KCPNWFP 240
EV ++ D+WS G +++VLL+G PF ++ I AE+ +
Sbjct: 173 EV-HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS 231
Query: 241 PEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQ 276
E + ++L +R++ ++ + W ++ + +
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI---DKDKIMRVGLADQIKREISVMRI 70
+KYE +G+G + V+ A++ T++ VA+K + D D+ G+ REI +++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE----GVPSSALREICLLKE 57
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYA-KGGELFNKVAKGKLKEDAARRYFQQLINAVDFC 129
++H NIV+L++V+ + K+ V E+ + + + G L + + + QL+ + FC
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSAL----AQCKHQDGLLHTTCGTPAYVAPE 185
HSR V HRD+KP K++DFGL+ +C + + T Y P+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV------TLWYRPPD 171
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-----DSNLIEMYRKIGK-------AEF 233
V+ +D+WS G + L P D L ++R +G +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 234 KCPNWFP--------------PEV----RKLLCKILDPNPSTRISMAKIRESSWF 270
K P++ P P++ R LL +L NP RIS + + +F
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI----DKDKIMRVGLADQIKREISV 67
+ EKYE +G+G++ V+ R+ T Q VA+K D I ++ L REI +
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL-----REIRM 55
Query: 68 MRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINA 125
++ ++HPN+V L EV K ++ V EY L ++ +G + E + Q + A
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQA 114
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V+FCH HRD+KP K+ DFG + L T Y +PE
Sbjct: 115 VNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPE 172
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAG 212
++ G VD+W+ G V LL+G
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 76
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 191
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 100
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGXVATRWYRAPEIML 215
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 99
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 214
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + K + A + RE+ +++ ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHMKH 92
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 207
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 100
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 215
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 86
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 76
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 191
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 90
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 150
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 85
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 200
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 76
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEIML 191
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 82
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 197
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 18/223 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVID-------KDKIMRVGLADQIKREIS 66
++YE LG+G FA VY AR TNQ VA+K I KD I R L REI
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL-----REIK 64
Query: 67 VMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGG-ELFNKVAKGKLKEDAARRYFQQLINA 125
+++ + HPNI+ L + KS I V ++ + E+ K L + Y +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
+++ H + HRD+KP K++DFGL+ ++ H T Y APE
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYXHQVV-TRWYRAPE 182
Query: 186 VINRKGYDGEKVDIWSCGVVL--FVLLAGYLPFHDSNLIEMYR 226
++ G VD+W+ G +L +L +LP DS+L ++ R
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELLLRVPFLP-GDSDLDQLTR 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGXVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 86
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI---DKDKIMRVGLADQIKREISVMRI 70
+KYE +G+G + V+ A++ T++ VA+K + D D+ G+ REI +++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE----GVPSSALREICLLKE 57
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYA-KGGELFNKVAKGKLKEDAARRYFQQLINAVDFC 129
++H NIV+L++V+ + K+ V E+ + + + G L + + + QL+ + FC
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSAL----AQCKHQDGLLHTTCGTPAYVAPE 185
HSR V HRD+KP K+++FGL+ +C + + T Y P+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV------TLWYRPPD 171
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-----DSNLIEMYRKIGK-------AEF 233
V+ +D+WS G + L P D L ++R +G +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 234 KCPNWFP--------------PEV----RKLLCKILDPNPSTRISMAKIRESSWF 270
K P++ P P++ R LL +L NP RIS + + +F
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGL---ADQIKREISVM 68
L +Y+VG LLG G VY + N VA+K ++KD+I G ++ E+ ++
Sbjct: 49 LESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 69 RIVRH--PNIVQLYEVMATKSKIFFVMEYAKG-GELFNKVA-KGKLKEDAARRYFQQLIN 124
+ V +++L + ++E + +LF+ + +G L+E+ AR +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
AV CH+ GV HRDIK K+ DFG AL +D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSP 224
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKAEFKCPNWFPPE 242
PE I Y G +WS G++L+ ++ G +PF HD +I G+ F+ E
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----GQVFFR--QRVSSE 277
Query: 243 VRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKV 282
+ L+ L PS R + +I+ W + + ++ ++
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 317
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 85
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 200
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 91
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 206
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 92
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 207
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 103
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGYVATRWYRAPEIML 218
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 92
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 207
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 86
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 85
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 200
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 79
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 194
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 82
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 197
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 103
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 218
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 87
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 202
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 85
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 200
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 78
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 193
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 100
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 215
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 91
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 206
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 76
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 191
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 99
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 214
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 77
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 192
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 82
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 197
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 82
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 197
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 86
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V + +++ +AVK + + + A + RE+ +++ ++H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 109
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + + +++ + G +L N V KL +D + Q++ + +
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 169
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 224
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGK 230
+ VDIWS G ++ LL G F ++ I ++I +
Sbjct: 225 NWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMR 266
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R +G GA+ V A R Q VAVK + + + A + RE+ +++ ++H N++ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 80 YEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
+V + I +++ G +L N V L ++ + QL+ + + HS G+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+KP +I DFGL+ + D + T Y APE++ +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ VDIWS G ++ LL G F S+ I+ ++I
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 77
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H D + T Y APE++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 192
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R +G GA+ V A R Q VAVK + + + A + RE+ +++ ++H N++ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 80 YEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
+V + I +++ G +L N V L ++ + QL+ + + HS G+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+KP +I DFGL+ + D + T Y APE++ +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ VDIWS G ++ LL G F S+ I+ ++I
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI D+GL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-RIVRHP 74
+E+ L+G G + +VY R ++T Q A+KV+D + ++IK+EI+++ + H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 81
Query: 75 NIVQLYEVMATKS------KIFFVMEYAKGG---ELFNKVAKGKLKEDAARRYFQQLINA 125
NI Y K+ +++ VME+ G +L LKE+ ++++
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
+ H V HRDIK K+ DFG+S AQ G +T GTP ++APE
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAPE 199
Query: 186 VI----NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHD 218
VI N K D+WS G+ + G P D
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R +G GA+ V A R Q VAVK + + + A + RE+ +++ ++H N++ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 80 YEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGV 134
+V + I +++ G +L N V L ++ + QL+ + + HS G+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+KP +I DFGL+ + D + T Y APE++ +
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLA-----RQADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ VDIWS G ++ LL G F S+ I+ ++I
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 17/250 (6%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R +G G+F VY+AR +R ++ VA+K + I +E+ ++ +RHPN +Q
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 80 YEVMATKSKIFFVMEYAKG-GELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
+ + VMEY G +V K L+E + + + HS + HRD
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGYDGE 195
+K K+ DFG +++ + GTP ++APEVI + YDG
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDG- 232
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNW---FPPEVRKLLCK 249
KVD+WS G+ L P + N + I + E + +W F V L K
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 292
Query: 250 ILDPNPSTRI 259
I P++ +
Sbjct: 293 IPQDRPTSEV 302
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 17/250 (6%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R +G G+F VY+AR +R ++ VA+K + I +E+ ++ +RHPN +Q
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 80 YEVMATKSKIFFVMEYAKG-GELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
+ + VMEY G +V K L+E + + + HS + HRD
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGYDGE 195
+K K+ DFG +++ + GTP ++APEVI + YDG
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDG- 193
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---FKCPNW---FPPEVRKLLCK 249
KVD+WS G+ L P + N + I + E + +W F V L K
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 253
Query: 250 ILDPNPSTRI 259
I P++ +
Sbjct: 254 IPQDRPTSEV 263
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DF L+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 19/263 (7%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 16 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 71
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + + +Q +D+ H++ +
Sbjct: 72 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 130
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD-- 193
HRD+K KI DFGL+ + G+ ++APEVI + +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRK------IGKAEFKCPNWFPPEV 243
+ D+++ G+VL+ L+ G LP+ + N +IEM + + K CP +
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 250
Query: 244 RKLLCKILDPNPSTRISMAKIRE 266
+ L K D PS +A+I E
Sbjct: 251 AECLKKKRDERPSFPRILAEIEE 273
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 45/285 (15%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVI--DKDKIMRVGLADQIKREISVMRIVRH----- 73
+LGQGAF +V AR+ ++ A+K I ++K+ + + ++ +VR+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 74 --PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE--DAARRYFQQLINAVDFC 129
N V+ + KS +F EY + L++ + L + D R F+Q++ A+ +
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA-------LAQCKHQD-----GLLHTTCG 177
HS+G+ HR++KP KI DFGL+ + + Q+ L + G
Sbjct: 133 HSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDS----NLIEMYRKIGKAEF 233
T YVA EV++ G+ EK+D +S G++ F + PF N+++ R +
Sbjct: 193 TAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLRSVSIE-- 247
Query: 234 KCPNWFPPEV--------RKLLCKILDPNPSTRISMAKIRESSWF 270
FPP+ +K++ ++D +P+ R + S W
Sbjct: 248 -----FPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 19 GRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--DKIMRVGLADQIKREISVMRIVRHPNI 76
G +LG+G F + T + + +K + + ++ R L +E+ VMR + HPN+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL-----KEVKVMRCLEHPNV 69
Query: 77 VQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINAVDFCHSRGV 134
++ V+ ++ F+ EY KGG L + + ++R + + + + + + HS +
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALA--QCKHQDGL----------LHTTCGTPAYV 182
HRD+ ++DFGL+ L + +GL +T G P ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLA------GYLPFHDSNLIEMYRKIGKAEFKCP 236
APE+IN + YD EKVD++S G+VL ++ YLP + + G + CP
Sbjct: 190 APEMINGRSYD-EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR---GFLDRYCP 245
Query: 237 NWFPPEVRKLLCKILDPNPSTRISMAKI 264
PP + + D +P R S K+
Sbjct: 246 PNCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI FGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 20/254 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G G+F V+ R+ VAVK++ ++ ++ RE+++M+ +RHPNIV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKIL-MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKE--DAARRYFQ--QLINAVDFCHSRG--VY 135
+ + V EY G L+ + K +E D RR + +++ H+R +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGE 195
HRD+K K+ DFGLS L GTP ++APEV+ R E
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVL-RDEPSNE 218
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKC-----PNWFPPEVRKLLCKI 250
K D++S GV+L+ L P+ + N ++ +G FKC P P+V ++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG---FKCKRLEIPRNLNPQVAAIIEGC 275
Query: 251 LDPNPSTRISMAKI 264
P R S A I
Sbjct: 276 WTNEPWKRPSFATI 289
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 87
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H + T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML 202
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 87
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H + T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML 202
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 87
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI DFGL+ +H + T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML 202
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI D GL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 20/254 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G G+F V+ R+ VAVK++ ++ ++ RE+++M+ +RHPNIV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKIL-MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKE--DAARRYFQ--QLINAVDFCHSRG--VY 135
+ + V EY G L+ + K +E D RR + +++ H+R +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGE 195
HR++K K+ DFGLS L + GTP ++APEV+ R E
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVL-RDEPSNE 218
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKC-----PNWFPPEVRKLLCKI 250
K D++S GV+L+ L P+ + N ++ +G FKC P P+V ++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG---FKCKRLEIPRNLNPQVAAIIEGC 275
Query: 251 LDPNPSTRISMAKI 264
P R S A I
Sbjct: 276 WTNEPWKRPSFATI 289
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI D GL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+Y+ +G GA+ V A +T VAVK + + + A + RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKH 80
Query: 74 PNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
N++ L +V + +++ + G +L N V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
HS + HRD+KP KI D GL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
+ + VDIWS G ++ LL G F ++ I+ + I
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 28 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 83
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + + +Q +D+ H++ +
Sbjct: 84 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD-- 193
HRD+K KI DFGL+ G+ ++APEVI + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRK------IGKAEFKCPNWFPPEV 243
+ D+++ G+VL+ L+ G LP+ + N +IEM + + K CP +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
Query: 244 RKLLCKILDPNPSTRISMAKIRE 266
+ L K D PS +A+I E
Sbjct: 263 AECLKKKRDERPSFPRILAEIEE 285
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 28/276 (10%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVI-DKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
+LG+G + VY R + +A+K I ++D + + EI++ + ++H NIVQ
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQY 84
Query: 80 YEVMATKSKIFFVMEYAKGGELF----NKVAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
+ I ME GG L +K K E Y +Q++ + + H +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 136 HRDIK-PXXXXXXXXXXXKISDFG----LSALAQCKHQDGLLHTTCGTPAYVAPEVINR- 189
HRDIK KISDFG L+ + C T GT Y+APE+I++
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE------TFTGTLQYMAPEIIDKG 198
Query: 190 -KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIE--MYRKIG--KAEFKCPNWFPPEVR 244
+GY G+ DIWS G + + G PF++ + M+ K+G K + P E +
Sbjct: 199 PRGY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAK 256
Query: 245 KLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQ 280
+ K +P+P R + + + +K+ Q
Sbjct: 257 AFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ 292
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 28/254 (11%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVI-DKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
+LG+G + VY R + +A+K I ++D + + EI++ + ++H NIVQ
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQY 70
Query: 80 YEVMATKSKIFFVMEYAKGGELF----NKVAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
+ I ME GG L +K K E Y +Q++ + + H +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 136 HRDIK-PXXXXXXXXXXXKISDFG----LSALAQCKHQDGLLHTTCGTPAYVAPEVINR- 189
HRDIK KISDFG L+ + C T GT Y+APE+I++
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE------TFTGTLQYMAPEIIDKG 184
Query: 190 -KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIE--MYRKIG--KAEFKCPNWFPPEVR 244
+GY G+ DIWS G + + G PF++ + M+ K+G K + P E +
Sbjct: 185 PRGY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAK 242
Query: 245 KLLCKILDPNPSTR 258
+ K +P+P R
Sbjct: 243 AFILKCFEPDPDKR 256
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +G +G+G F +V+ R N VAVK + + L + +E +++ H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE--TLPPDLKAKFLQEARILKQYSH 171
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAV------- 126
PNIV+L V K I+ VME +GG+ L+ + AR + L+ V
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLT-----FLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG---TPA-YV 182
++ S+ HRD+ KISDFG+S + DG+ + G P +
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWT 282
Query: 183 APEVINRKGYDGEKVDIWSCGVVL---FVLLAGYLP-FHDSNLIEMYRKIGKAEFKCPNW 238
APE +N Y E D+WS G++L F L A P + E K G+ CP
Sbjct: 283 APEALNYGRYSSES-DVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR--LPCPEL 339
Query: 239 FPPEVRKLLCKILDPNPSTRISMAKI 264
P V +L+ + P R S + I
Sbjct: 340 CPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E +G +G+G F +V+ R N VAVK + + L + +E +++ H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE--TLPPDLKAKFLQEARILKQYSH 171
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAV------- 126
PNIV+L V K I+ VME +GG+ L+ + AR + L+ V
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLT-----FLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG---TPA-YV 182
++ S+ HRD+ KISDFG+S + DG+ + G P +
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWT 282
Query: 183 APEVINRKGYDGEKVDIWSCGVVL---FVLLAGYLP-FHDSNLIEMYRKIGKAEFKCPNW 238
APE +N Y E D+WS G++L F L A P + E K G+ CP
Sbjct: 283 APEALNYGRYSSES-DVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR--LPCPEL 339
Query: 239 FPPEVRKLLCKILDPNPSTRISMAKI 264
P V +L+ + P R S + I
Sbjct: 340 CPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G GA+ V A R+ + VA+K + + + A + RE+ +++ ++H N++ L +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 90
Query: 82 VMATKSKI------FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
V S + + VM + + K+ K E+ + Q++ + + HS GV
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGE 195
HRD+KP KI DFGL+ +H D + T Y APEVI + +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGK 230
VDIWS G ++ +L G F + ++ +I K
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 101
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K +++ + G +L+ + L D + Q++ + + H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 222 SKGY-TKSIDIWSVGCILAEMLSN 244
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 52/287 (18%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G+ K +++ + ++LG G KV + RT + A+K++ + +
Sbjct: 7 GLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKAR 58
Query: 63 REISV-MRIVRHPNIVQLYEVM----ATKSKIFFVMEYAKGGELFNKV---AKGKLKEDA 114
RE+ + R + P+IV++ +V A + + VME GGELF+++ E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118
Query: 115 ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX---XXXKISDFGLSALAQCKHQDGL 171
A + + A+ + HS + HRD+KP K++DFG
Sbjct: 119 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------------ 166
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYR----- 226
A E K YD + D+WS GV++++LL GY PF+ ++ + +
Sbjct: 167 -----------AKETTGEK-YD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 213
Query: 227 -KIGKAEFKCPNW--FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
++G+ EF P W EV+ L+ +L P+ R+++ + W
Sbjct: 214 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 19/263 (7%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 28 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 83
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRGVY 135
L+ +T ++ V ++ +G L++ + + K + + +Q +D+ H++ +
Sbjct: 84 -LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD-- 193
HRD+K KI DFGL+ G+ ++APEVI + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRK------IGKAEFKCPNWFPPEV 243
+ D+++ G+VL+ L+ G LP+ + N +IEM + + K CP +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
Query: 244 RKLLCKILDPNPSTRISMAKIRE 266
+ L K D PS +A+I E
Sbjct: 263 AECLKKKRDERPSFPRILAEIEE 285
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISVMR--- 69
++YE +G+GA+ KV+ AR ++ + VA+K + + + G+ RE++V+R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLE 69
Query: 70 IVRHPNIVQLYEVMAT-----KSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQL 122
HPN+V+L++V ++K+ V E+ +KV + + + + QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+ +DF HS V HRD+KP K++DFGL+ + + L + T Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
APEV+ + Y VD+WS G + + F S+ ++ KI
Sbjct: 187 APEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG+G + +VY A TN++VA+K I + G+ RE+S+++ ++H NI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKP 141
V+ ++ + EYA+ + + + QLIN V+FCHSR HRD+KP
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKP 160
Query: 142 -----XXXXXXXXXXXKISDFGLS-----ALAQCKHQDGLLHTTCGTPAYVAPEVINRKG 191
KI DFGL+ + Q H+ T Y PE++
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE-------IITLWYRPPEILLGSR 213
Query: 192 YDGEKVDIWSCGVV 205
+ VDIWS +
Sbjct: 214 HYSTSVDIWSIACI 227
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 22/278 (7%)
Query: 3 GMDHNKPSVLTEKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV 55
MD + P+ +K+E+ R LG G + +VY + + +VAVK + +D M V
Sbjct: 2 AMDPSSPNY--DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV 58
Query: 56 GLADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAA 115
++ +E +VM+ ++HPN+VQL V + + + E+ G L + + + +E +A
Sbjct: 59 ---EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA 115
Query: 116 RRYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLL 172
Q+ +A+++ + HRD+ K++DFGLS L
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-- 173
Query: 173 HTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK 230
H P + APE + + K D+W+ GV+L+ + G P+ +L ++Y + K
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
Query: 231 -AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
+ P P +V +L+ NPS R S A+I ++
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 270
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 13/221 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A ++VA+K + + A + RE+ +M++V H
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVVNH 82
Query: 74 PNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME ++V + +L + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
GY E VDIWS GV++ ++ G + F ++ I+ + K+
Sbjct: 198 LGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISVMR--- 69
++YE +G+GA+ KV+ AR ++ + VA+K + + + G+ RE++V+R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLE 69
Query: 70 IVRHPNIVQLYEVMAT-----KSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQL 122
HPN+V+L++V ++K+ V E+ +KV + + + + QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+ +DF HS V HRD+KP K++DFGL+ + + L + T Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 183 APEVINRKGYDGEKVDIWSCGVVL 206
APEV+ + Y VD+WS G +
Sbjct: 187 APEVLLQSSY-ATPVDLWSVGCIF 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G GA+ V A R+ + VA+K + + + A + RE+ +++ ++H N++ L +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 108
Query: 82 VMATKSKI------FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
V S + + VM + + K+ + E+ + Q++ + + HS GV
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGE 195
HRD+KP KI DFGL+ +H D + T Y APEVI + +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 196 KVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGK 230
VDIWS G ++ +L G F + ++ +I K
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 9 PSVLTEKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
PS +K+E+ R LG G + +VY + + +VAVK + +D M V ++
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEF 57
Query: 62 KREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF-- 119
+E +VM+ ++HPN+VQL V + + ++E+ G L + + + +E A
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 120 -QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGT 178
Q+ +A+++ + HRD+ K++DFGLS L H
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA--HAGAKF 175
Query: 179 P-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKC 235
P + APE + + K D+W+ GV+L+ + G P+ +L ++Y + K +
Sbjct: 176 PIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 234
Query: 236 PNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
P P +V +L+ NPS R S A+I ++
Sbjct: 235 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 266
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 76
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + ++E+ G L + + + +E +A Q+ +A+++ + HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 254 SDRPSFAEIHQA 265
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISVMR--- 69
++YE +G+GA+ KV+ AR ++ + VA+K + + + G+ RE++V+R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLE 69
Query: 70 IVRHPNIVQLYEVMAT-----KSKIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQL 122
HPN+V+L++V ++K+ V E+ +KV + + + + QL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+ +DF HS V HRD+KP K++DFGL+ + + L + T Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
APEV+ + Y VD+WS G + + F S+ ++ KI
Sbjct: 187 APEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G GA+ V A RT VA+K + + A + RE+ +++ +RH N++ L +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 82 VMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYH 136
V + F+++ G +L + KL ED + Q++ + + H+ G+ H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 151
Query: 137 RDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEK 196
RD+KP KI DFGL+ + D + T Y APEVI +
Sbjct: 152 RDLKPGNLAVNEDCELKILDFGLA-----RQADSEMXGXVVTRWYRAPEVILNWMRYTQT 206
Query: 197 VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWF 239
VDIWS G ++ ++ G F S+ ++ ++I K P F
Sbjct: 207 VDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 95
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + V EY G L + + + +E A Q+ +A+++ + HRD
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNTFS-IKS 212
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P PP+V +L+ +P
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSP 272
Query: 256 STRISMAKIRES 267
+ R S A+ ++
Sbjct: 273 ADRPSFAETHQA 284
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 13/221 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A ++VA+K + + A + RE+ +M++V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVVNH 82
Query: 74 PNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME ++V + +L + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
GY E VDIWS GV++ ++ G + F ++ I+ + K+
Sbjct: 198 LGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 22/277 (7%)
Query: 4 MDHNKPSVLTEKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVG 56
MD + P+ +K+E+ R LG G + +VY + + +VAVK + +D M V
Sbjct: 3 MDPSSPNY--DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV- 58
Query: 57 LADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR 116
++ +E +VM+ ++HPN+VQL V + + ++E+ G L + + + +E A
Sbjct: 59 --EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV 116
Query: 117 RYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLH 173
Q+ +A+++ + HRD+ K++DFGLS L H
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--H 174
Query: 174 TTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK- 230
P + APE + + K D+W+ GV+L+ + G P+ +L ++Y + K
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
+ P P +V +L+ NPS R S A+I ++
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 76
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + ++E+ G L + + + +E +A Q+ +A+++ + HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 254 SDRPSFAEIHQA 265
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 3 GMDHNKPSVLTEKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV 55
MD + P+ +K+E+ R LG G + +VY + + +VAVK + +D M V
Sbjct: 2 AMDPSSPNY--DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV 58
Query: 56 GLADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAA 115
++ +E +VM+ ++HPN+VQL V + + + E+ G L + + + +E A
Sbjct: 59 ---EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 116 RRYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLL 172
Q+ +A+++ + HRD+ K++DFGLS L
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA-- 173
Query: 173 HTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK 230
H P + APE + + K D+W+ GV+L+ + G P+ +L ++Y + K
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
Query: 231 -AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
+ P P +V +L+ NPS R S A+I ++
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 270
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 9/215 (4%)
Query: 4 MDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKR 63
M +P + +Y + +G+GA+ V A VA+K I + R
Sbjct: 33 MVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP--FEHQTYCQRTLR 90
Query: 64 EISVMRIVRHPNIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYF 119
EI ++ RH N++ + +++ + + ++++ +L+ + +L D +
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 120 QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGT 178
Q++ + + HS V HRD+KP KI DFGL+ +A +H G L T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 179 PAYVAPEV-INRKGYDGEKVDIWSCGVVLFVLLAG 212
Y APE+ +N KGY + +DIWS G +L +L+
Sbjct: 211 RWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 244
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KYE +GQG F +V+ AR +T Q VA+K + + + G REI ++++++H
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHE 77
Query: 75 NIVQLYEVMATKSK--------IFFVMEYAK---GGELFNKVAKGKLKEDAARRYFQQLI 123
N+V L E+ TK+ I+ V ++ + G L N + K L E +R Q L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKH-QDGLLHTTCGTPAY 181
N + + H + HRD+K K++DFGL+ A + K+ Q T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVL 206
PE++ + G +D+W G ++
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 3 GMDHNKPSVLTEKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV 55
MD + P+ +K+E+ R LG G + +VY + + +VAVK + +D M V
Sbjct: 2 AMDPSSPNY--DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV 58
Query: 56 GLADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAA 115
++ +E +VM+ ++HPN+VQL V + + + E+ G L + + + +E A
Sbjct: 59 ---EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 116 RRYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLL 172
Q+ +A+++ + HRD+ K++DFGLS L
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-- 173
Query: 173 HTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK 230
H P + APE + + K D+W+ GV+L+ + G P+ +L ++Y + K
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
Query: 231 -AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
+ P P +V +L+ NPS R S A+I ++
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 76
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E +A Q+ +A+++ + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 254 SDRPSFAEIHQA 265
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KYE +GQG F +V+ AR +T Q VA+K + + + G REI ++++++H
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHE 76
Query: 75 NIVQLYEVMATKSK--------IFFVMEYAK---GGELFNKVAKGKLKEDAARRYFQQLI 123
N+V L E+ TK+ I+ V ++ + G L N + K L E +R Q L+
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 134
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKH-QDGLLHTTCGTPAY 181
N + + H + HRD+K K++DFGL+ A + K+ Q T Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVL 206
PE++ + G +D+W G ++
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIM 219
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KYE +GQG F +V+ AR +T Q VA+K + + + G REI ++++++H
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHE 77
Query: 75 NIVQLYEVMATKSK--------IFFVMEYAK---GGELFNKVAKGKLKEDAARRYFQQLI 123
N+V L E+ TK+ I+ V ++ + G L N + K L E +R Q L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKH-QDGLLHTTCGTPAY 181
N + + H + HRD+K K++DFGL+ A + K+ Q T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVL 206
PE++ + G +D+W G ++
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
KYE +GQG F +V+ AR +T Q VA+K + + + G REI ++++++H
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHE 77
Query: 75 NIVQLYEVMATKSK--------IFFVMEYAK---GGELFNKVAKGKLKEDAARRYFQQLI 123
N+V L E+ TK+ I+ V ++ + G L N + K L E +R Q L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKH-QDGLLHTTCGTPAY 181
N + + H + HRD+K K++DFGL+ A + K+ Q T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVL 206
PE++ + G +D+W G ++
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 76
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E +A Q+ +A+++ + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 254 SDRPSFAEIHQA 265
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 20/272 (7%)
Query: 9 PSVLTEKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
PS +K+E+ R LG G + +VY + + +VAVK + +D M V ++
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEF 60
Query: 62 KREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF-- 119
+E +VM+ ++HPN+VQL V + + + E+ G L + + + +E A
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 120 -QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGT 178
Q+ +A+++ + HRD+ K++DFGLS L H
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKF 178
Query: 179 P-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKC 235
P + APE + + K D+W+ GV+L+ + G P+ +L ++Y + K +
Sbjct: 179 PIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 237
Query: 236 PNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
P P +V +L+ NPS R S A+I ++
Sbjct: 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 269
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 4 MDHNKPSVLTEKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVG 56
MD + P+ +K+E+ R LG G + +VY + + +VAVK + +D M V
Sbjct: 3 MDPSSPNY--DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV- 58
Query: 57 LADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR 116
++ +E +VM+ ++HPN+VQL V + + + E+ G L + + + +E A
Sbjct: 59 --EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 117 RYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLH 173
Q+ +A+++ + HRD+ K++DFGLS L H
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--H 174
Query: 174 TTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK- 230
P + APE + + K D+W+ GV+L+ + G P+ +L ++Y + K
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 233
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
+ P P +V +L+ NPS R S A+I ++
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 270
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 51/285 (17%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F V+ A+ + +++ VA+K + +DK + RE+ +MRIV+HPN
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFK-------NRELQIMRIVKHPN 93
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVAKGKLKEDAA----RRYFQQLINA 125
+V L Y K ++F V+EY KLK+ + Y QL+ +
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ + HS G+ HRDIKP K+ DFG + + + + C Y AP
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSR-YYRAP 210
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIG---KAEFKC-- 235
E+I +DIWS G V+ L+ G F + L+E+ + +G + + K
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270
Query: 236 PNWF--------------------PPEVRKLLCKILDPNPSTRIS 260
PN+ PP+ L+ ++L+ PS R++
Sbjct: 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E+ E+G L+G+G F +VY+ R + VA+++ID ++ L KRE+ R RH
Sbjct: 33 EQLEIGELIGKGRFGQVYHGR---WHGEVAIRLIDIERDNEDQLK-AFKREVMAYRQTRH 88
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA--ARRYFQQLINAVDFCHS 131
N+V + + + KG L++ V K+ D R+ Q+++ + + H+
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA 148
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGL---SALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
+G+ H+D+K I+DFGL S + Q ++ L G ++APE+I
Sbjct: 149 KGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 189 RKGYDGEK--------VDIWSCGVVLFVLLAGYLPF 216
+ D E+ D+++ G + + L A PF
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 89
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E A Q+ +A+++ + HRD
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 206
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 266
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 267 SDRPSFAEIHQA 278
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 25/279 (8%)
Query: 7 NKPSVLT-----EKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMR 54
NKP++ +K+E+ R LG G + +VY + + +VAVK + +D M
Sbjct: 201 NKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TME 259
Query: 55 VGLADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA 114
V ++ +E +VM+ ++HPN+VQL V + + + E+ G L + + + +E +
Sbjct: 260 V---EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 316
Query: 115 ARRYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGL 171
A Q+ +A+++ + HR++ K++DFGLS L
Sbjct: 317 AVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA- 375
Query: 172 LHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIG 229
H P + APE + + K D+W+ GV+L+ + G P+ +L ++Y +
Sbjct: 376 -HAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433
Query: 230 K-AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
K + P P +V +L+ NPS R S A+I ++
Sbjct: 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 78
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E A Q+ +A+++ + HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 195
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 256 SDRPSFAEIHQA 267
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 206 SKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
L EKY+ +G+G + VY A+ + VA+K I D G+ REIS+++ +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA-EDEGIPSTAIREISLLKEL 76
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA---KGKLKEDAARRYFQQLINAVDF 128
HPNIV L +V+ ++ + V E+ + KV K L++ + Y QL+ V
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
CH + HRD+KP K++DFGL A A H T Y AP+V+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGL-ARAFGIPVRSYTHEVV-TLWYRAPDVLM 192
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
VDIWS G + ++ G
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 86
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 207 SKGY-TKSIDIWSVGCILAEMLSN 229
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G F V R N+ VAVK I D + LA E SVM +RH N+VQL
Sbjct: 201 IGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQLLG 253
Query: 82 VMAT-KSKIFFVMEYAKGGELFNKV-AKGK--LKEDAARRYFQQLINAVDFCHSRGVYHR 137
V+ K ++ V EY G L + + ++G+ L D ++ + A+++ HR
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 313
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKV 197
D+ K+SDFGL+ A G L + APE + K + K
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFS-TKS 367
Query: 198 DIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L+ + + G +P+ L ++ ++ K + P+ PP V ++ +
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDA 427
Query: 256 STRISMAKIRE 266
+TR + ++RE
Sbjct: 428 ATRPTFLQLRE 438
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
L EKY+ +G+G + VY A+ + VA+K I D G+ REIS+++ +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA-EDEGIPSTAIREISLLKEL 76
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVA---KGKLKEDAARRYFQQLINAVDF 128
HPNIV L +V+ ++ + V E+ + KV K L++ + Y QL+ V
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
CH + HRD+KP K++DFGL A A H T Y AP+V+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGL-ARAFGIPVRSYTHEVV-TLWYRAPDVLM 192
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
VDIWS G + ++ G
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 78
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E A Q+ +A+++ + HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 195
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 255
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 256 SDRPSFAEIHQA 267
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHE 83
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 204 SKGY-TKSIDIWSVGCILAEMLSN 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 74
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E +A Q+ +A+++ + HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTA--HAGAKFPIKWTAPESLAYNKFSI-KS 191
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ + ++Y + K + P P +V +L+ NP
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 252 SDRPSFAEIHQA 263
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D + ++ +E +VM+ ++HPN+VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E A Q+ +A+++ + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 254 SDRPSFAEIHQA 265
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHE 83
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 204 SKGY-TKSIDIWSVGCILAEMLSN 226
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 13/224 (5%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKV 79
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME ++V + +L + Q++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
EVI GY E VDIWS G ++ ++ G + F ++ I+ + K+
Sbjct: 195 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G F V R N+ VAVK I D + LA E SVM +RH N+VQL
Sbjct: 29 IGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQLLG 81
Query: 82 VMAT-KSKIFFVMEYAKGGELFNKV-AKGK--LKEDAARRYFQQLINAVDFCHSRGVYHR 137
V+ K ++ V EY G L + + ++G+ L D ++ + A+++ HR
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 141
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKV 197
D+ K+SDFGL+ A G L + APE + K + K
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALREKKFS-TKS 195
Query: 198 DIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L+ + + G +P+ L ++ ++ K + P+ PP V +++ +
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 255
Query: 256 STRISMAKIRE 266
+ R S ++RE
Sbjct: 256 AMRPSFLQLRE 266
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 7 NKPSVLT-----EKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMR 54
NKP+V +K+E+ R LG G + +VY + + +VAVK + +D M
Sbjct: 198 NKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TME 256
Query: 55 VGLADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA 114
V ++ +E +VM+ ++HPN+VQL V + + + E+ G L + + + +E
Sbjct: 257 V---EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 313
Query: 115 ARRYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGL 171
A Q+ +A+++ + HR++ K++DFGLS L
Sbjct: 314 AVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA- 372
Query: 172 LHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIG 229
H P + APE + + K D+W+ GV+L+ + G P+ +L ++Y +
Sbjct: 373 -HAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 430
Query: 230 K-AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
K + P P +V +L+ NPS R S A+I ++
Sbjct: 431 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 469
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 206 SKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G F V R N+ VAVK I D + LA E SVM +RH N+VQL
Sbjct: 14 IGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQLLG 66
Query: 82 VMAT-KSKIFFVMEYAKGGELFNKV-AKGK--LKEDAARRYFQQLINAVDFCHSRGVYHR 137
V+ K ++ V EY G L + + ++G+ L D ++ + A+++ HR
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 126
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKV 197
D+ K+SDFGL+ A G L + APE + K + K
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALREKKFS-TKS 180
Query: 198 DIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L+ + + G +P+ L ++ ++ K + P+ PP V +++ +
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 240
Query: 256 STRISMAKIRE 266
+ R S ++RE
Sbjct: 241 AMRPSFLQLRE 251
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D + ++ +E +VM+ ++HPN+VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E A Q+ +A+++ + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSI-KS 193
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+ NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 254 SDRPSFAEIHQA 265
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 13/221 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A ++VA+K + + A + RE+ +M++V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVVNH 82
Query: 74 PNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME ++V + +L + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
GY E VDIWS G ++ ++ G + F ++ I+ + K+
Sbjct: 198 LGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
T +YE +G GA+ VY AR + VA+K + + GL RE++++R +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLE 61
Query: 73 ---HPNIVQLYEVMATKS-----KIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQL 122
HPN+V+L +V AT K+ V E+ +K L + + +Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+ +DF H+ + HRD+KP K++DFGL+ + + L T Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LDPVVVTLWYR 178
Query: 183 APEVINRKGYDGEKVDIWSCGVVL 206
APEV+ + Y VD+WS G +
Sbjct: 179 APEVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
T +YE +G GA+ VY AR + VA+K + + GL RE++++R +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLE 61
Query: 73 ---HPNIVQLYEVMATKS-----KIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQL 122
HPN+V+L +V AT K+ V E+ +K L + + +Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+ +DF H+ + HRD+KP K++DFGL+ + +Q L T Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVV-TLWYR 178
Query: 183 APEVINRKGYDGEKVDIWSCGVVL 206
APEV+ + Y VD+WS G +
Sbjct: 179 APEVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 25/258 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 77
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E A Q+ +A+++ + HRD
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-------YVAPEVINRKG 191
+ K++DFGLS L + T PA + APE +
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 192 YDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCK 249
+ K D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+
Sbjct: 190 FSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 248
Query: 250 ILDPNPSTRISMAKIRES 267
NPS R S A+I ++
Sbjct: 249 CWQWNPSDRPSFAEIHQA 266
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 86
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 207 SKGY-TKSIDIWSVGCILAEMLSN 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 87
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 208 SKGY-TKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 78
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 199 SKGY-TKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 206 SKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 79
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 200 SKGY-TKSIDIWSVGCILAEMLSN 222
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 25/258 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 78
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E A Q+ +A+++ + HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-------YVAPEVINRKG 191
+ K++DFGLS L + T PA + APE +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL--------MTGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 192 YDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCK 249
+ K D+W+ GV+L+ + G P+ +L ++Y + K + P P +V +L+
Sbjct: 191 FSI-KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 249
Query: 250 ILDPNPSTRISMAKIRES 267
NPS R S A+I ++
Sbjct: 250 CWQWNPSDRPSFAEIHQA 267
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYXQRTLREIKILLRFRHE 85
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 206 SKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 202 SKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 202 SKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 79
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 200 SKGY-TKSIDIWSVGCILAEMLSN 222
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 19 GRLLGQGAFAKVYYARSIRTNQSVAVK----VIDKDKIMRVGLADQIKREISVMRIVRHP 74
G +G+G F VY + N +VAVK ++D I L Q +EI VM +H
Sbjct: 36 GNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVD---ITTEELKQQFDQEIKVMAKCQHE 90
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVA----KGKLKEDAARRYFQQLINAVDFCH 130
N+V+L + + V Y G L ++++ L + Q N ++F H
Sbjct: 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
HRDIK KISDFGL+ ++ Q + GT AY+APE + +
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--R 208
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
G K DI+S GVVL ++ G LP D +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG-LPAVDEH 237
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 74
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + ++E+ G L + + + +E +A Q+ +A+++ + HRD
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTA--HAGAKFPIKWTAPESLAYNKFSI-KS 191
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ + ++Y + K + P P +V +L+ NP
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 252 SDRPSFAEIHQA 263
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 202 SKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 19 GRLLGQGAFAKVYYARSIRTNQSVAVK----VIDKDKIMRVGLADQIKREISVMRIVRHP 74
G +G+G F VY + N +VAVK ++D I L Q +EI VM +H
Sbjct: 36 GNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVD---ITTEELKQQFDQEIKVMAKCQHE 90
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVA----KGKLKEDAARRYFQQLINAVDFCH 130
N+V+L + + V Y G L ++++ L + Q N ++F H
Sbjct: 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
HRDIK KISDFGL+ ++ Q + GT AY+APE + +
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--R 208
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
G K DI+S GVVL ++ G LP D +
Sbjct: 209 GEITPKSDIYSFGVVLLEIITG-LPAVDEH 237
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK-DKIMRVGLADQIKREISVMRI 70
++ +++ LLG+GA+ V A T + VA+K I+ DK + A + REI +++
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKILKH 65
Query: 71 VRHPNIVQLYEVMATKS-----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINA 125
+H NI+ ++ + S +++ + E + +L ++ L +D + + Q + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSAL--------AQCKHQDGLLHTTCG 177
V H V HRD+KP K+ DFGL+ + ++ Q +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVL 206
T Y APEV+ +D+WSCG +L
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 7 NKPSVLT-----EKYEVGRL-------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMR 54
NKP+V +K+E+ R LG G + +VY + + +VAVK + +D M
Sbjct: 240 NKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TME 298
Query: 55 VGLADQIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA 114
V ++ +E +VM+ ++HPN+VQL V + + + E+ G L + + + +E
Sbjct: 299 V---EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 355
Query: 115 ARRYF---QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGL 171
A Q+ +A+++ + HR++ K++DFGLS L
Sbjct: 356 AVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA- 414
Query: 172 LHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIG 229
H P + APE + + K D+W+ GV+L+ + G P+ +L ++Y +
Sbjct: 415 -HAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 472
Query: 230 K-AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
K + P P +V +L+ NPS R S A+I ++
Sbjct: 473 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 511
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
T +YE +G GA+ VY AR + VA+K + + GL RE++++R +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLE 61
Query: 73 ---HPNIVQLYEVMATKS-----KIFFVMEYAKGG--ELFNKVAKGKLKEDAARRYFQQL 122
HPN+V+L +V AT K+ V E+ +K L + + +Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
+ +DF H+ + HRD+KP K++DFGL+ + + L T Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LAPVVVTLWYR 178
Query: 183 APEVINRKGYDGEKVDIWSCGVVL 206
APEV+ + Y VD+WS G +
Sbjct: 179 APEVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 83
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 204 SKGY-TKSIDIWSVGCILAEMLSN 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 202 SKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 89
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 210 SKGY-TKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 202 SKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI--DKDKIMRVGLADQIKREISV 67
S+ T +YE +G GA+ VY AR + VA+K + GL RE+++
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 68 MRIVR---HPNIVQLYEVMATKS-----KIFFVMEYAKGG--ELFNKVAKGKLKEDAARR 117
+R + HPN+V+L +V AT K+ V E+ +K L + +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
+Q + +DF H+ + HRD+KP K++DFGL+ + + L
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LTPVVV 181
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVL 206
T Y APEV+ + Y VD+WS G +
Sbjct: 182 TLWYRAPEVLLQSTY-ATPVDMWSVGCIF 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 101
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 222 SKGY-TKSIDIWSVGCILAEMLSN 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 19 GRLLGQGAFAKVYYARSIRTNQSVAVK----VIDKDKIMRVGLADQIKREISVMRIVRHP 74
G +G+G F VY + N +VAVK ++D I L Q +EI VM +H
Sbjct: 30 GNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVD---ITTEELKQQFDQEIKVMAKCQHE 84
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVA----KGKLKEDAARRYFQQLINAVDFCH 130
N+V+L + + V Y G L ++++ L + Q N ++F H
Sbjct: 85 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
HRDIK KISDFGL+ ++ Q + GT AY+APE + +
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--R 202
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
G K DI+S GVVL ++ G LP D +
Sbjct: 203 GEITPKSDIYSFGVVLLEIITG-LPAVDEH 231
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK-DKIMRVGLADQIKREISVMRI 70
++ +++ LLG+GA+ V A T + VA+K I+ DK + A + REI +++
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKILKH 65
Query: 71 VRHPNIVQLYEVMATKS-----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINA 125
+H NI+ ++ + S +++ + E + +L ++ L +D + + Q + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSAL--------AQCKHQDGLLHTTCG 177
V H V HRD+KP K+ DFGL+ + ++ Q +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVL 206
T Y APEV+ +D+WSCG +L
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 120/296 (40%), Gaps = 55/296 (18%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +VAVK + + A + RE+ +++ V H
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKCVNH 80
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V +L + Q++ +
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIK 138
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A + ++ T Y APEVI
Sbjct: 139 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST---NFMMTPYVVTRYYRAPEVI 195
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI------GKAEFKC------ 235
GY E VDIWS G ++ L+ G + F ++ I+ + K+ AEF
Sbjct: 196 LGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 236 -------------------PNW-FPPE----------VRKLLCKILDPNPSTRISM 261
P+W FP E R LL K+L +P RIS+
Sbjct: 255 RNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 310
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 19/251 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G F V R N+ VAVK I D + LA E SVM +RH N+VQL
Sbjct: 20 IGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQLLG 72
Query: 82 VMAT-KSKIFFVMEYAKGGELFNKV-AKGK--LKEDAARRYFQQLINAVDFCHSRGVYHR 137
V+ K ++ V EY G L + + ++G+ L D ++ + A+++ HR
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 132
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKV 197
D+ K+SDFGL+ A G L + APE + + K
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALREAAFS-TKS 186
Query: 198 DIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L+ + + G +P+ L ++ ++ K + P+ PP V +++ +
Sbjct: 187 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 246
Query: 256 STRISMAKIRE 266
+ R S ++RE
Sbjct: 247 AMRPSFLQLRE 257
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA+K I + REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 206 SKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRT-NQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-----KWMAPES 183
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 184 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 242
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 243 SLMTKCWAYDPSRRPRFTELK 263
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+Y +G+GA+ V A VA++ I + REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 75 NIVQLYEVMATKS----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
NI+ + +++ + K ++++ +L+ + L D + Q++ + + H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH-QDGLLHTTCGTPAYVAPEV-IN 188
S V HRD+KP KI DFGL+ +A H G L T Y APE+ +N
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAG 212
KGY + +DIWS G +L +L+
Sbjct: 206 SKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK-DKIMRVGLADQIKREISVMRI 70
++ +++ LLG+GA+ V A T + VA+K I+ DK + A + REI +++
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKILKH 65
Query: 71 VRHPNIVQLYEVMATKS-----KIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINA 125
+H NI+ ++ + S +++ + E + +L ++ L +D + + Q + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ---------CKHQDGLLHTTC 176
V H V HRD+KP K+ DFGL+ + Q G++
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV- 183
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVL 206
T Y APEV+ +D+WSCG +L
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME ++V + +L + Q++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
EVI GY E VDIWS G ++ ++ G + F ++ I+ + K+
Sbjct: 195 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRT-NQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 98 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 211
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 212 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 270
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 271 SLMTKCWAYDPSRRPRFTELK 291
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR-TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 73 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 186
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 187 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 245
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 246 SLMTKCWAYDPSRRPRFTELK 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR-TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 75 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 188
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 189 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 247
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 248 SLMTKCWAYDPSRRPRFTELK 268
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR-TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 183
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 184 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 242
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 243 SLMTKCWAYDPSRRPRFTELK 263
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR-TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 67 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 180
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 181 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 239
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 240 SLMTKCWAYDPSRRPRFTELK 260
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR-TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 72 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 185
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 186 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 244
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 245 SLMTKCWAYDPSRRPRFTELK 265
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 17 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 72
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGY 192
HRD+K KI DFGL+ + G+ ++APEVI ++ Y
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 192 SFQS-DVYAFGIVLYELMTGQLPYSNIN 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME ++V + +L + Q++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
EVI GY E VDIWS G ++ ++ G + F ++ I+ + K+
Sbjct: 195 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 46/289 (15%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLA-DQIKREISVMRIVRHP 74
+E + LG+G F V+ A++ + + A+K I ++ LA +++ RE+ + + HP
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHP 63
Query: 75 NIVQLYEVMATKSK------------IFFVMEYAKGGELFNKVAKGKLKEDAAR----RY 118
IV+ + K+ ++ M+ + L + + E+ R
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGL-SALAQCKHQDGLL----- 172
F Q+ AV+F HS+G+ HRD+KP K+ DFGL +A+ Q + + +L
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 173 ---HT-TCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
HT GT Y++PE I+ Y KVDI+S G++LF LL PF S +E R +
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSY-SHKVDIFSLGLILFELL---YPF--STQMERVRTL 237
Query: 229 GKAE-FKCPNWFPPEVRKLLCK------ILDPNPSTRISMAKIRESSWF 270
K P F +K C+ +L P+P R I E++ F
Sbjct: 238 TDVRNLKFPPLF---TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A ++VA+K + + A + RE+ +M+ V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 82
Query: 74 PNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPEVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ G + F ++ I+ + K I + CP + P V
Sbjct: 198 LGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 244 R 244
R
Sbjct: 257 R 257
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR-TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 563
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 564 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 622
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 623 SLMTKCWAYDPSRRPRFTELK 643
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 12 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 67
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGY 192
HRD+K KI DFGL+ + G+ ++APEVI ++ Y
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 187 SFQS-DVYAFGIVLYELMTGQLPYSNIN 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRT-NQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 183
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 184 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 242
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 243 SLMTKCWAYDPSRRPRFTELK 263
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 17 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 72
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGY 192
HRD+K KI DFGL+ + G+ ++APEVI ++ Y
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 192 SFQS-DVYAFGIVLYELMTGQLPYSNIN 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRT-NQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 183
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 184 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 242
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 243 SLMTKCWAYDPSRRPRFTELK 263
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 40 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 95
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 96 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD-- 193
HRD+K KI DFGL+ + G+ ++APEVI + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 14 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 69
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 70 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 128
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGY 192
HRD+K KI DFGL+ + G+ ++APEVI ++ Y
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 189 SFQS-DVYAFGIVLYELMTGQLPYSNIN 215
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 80
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 138
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 195
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ G + F ++ I+ + K I + CP +
Sbjct: 196 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 241 PEVR 244
P VR
Sbjct: 255 PTVR 258
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIR-TNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
E+ E+GR +G+G F V+ + N ++AV + + ++ +E MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HP+IV+L V+ T++ ++ +ME GEL F +V K L + Y QL A+ +
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQ----CKHQDGLLHTTCGTPAYVAPEV 186
S+ HRDI K+ DFGLS + K G L ++APE
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 563
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVR 244
IN + + D+W GV ++ +L+ G PF ++ +I E P PP +
Sbjct: 564 INFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 622
Query: 245 KLLCKILDPNPSTRISMAKIR 265
L+ K +PS R +++
Sbjct: 623 SLMTKCWAYDPSRRPRFTELK 643
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 39 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 94
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 95 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 153
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD-- 193
HRD+K KI DFGL+ + G+ ++APEVI + +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ G + F ++ I+ + K I + CP +
Sbjct: 195 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 241 PEVR 244
P VR
Sbjct: 254 PTVR 257
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G + +VY + + +VAVK + +D M V ++ +E +VM+ ++HPN+VQL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEV---EEFLKEAAVMKEIKHPNLVQLLG 74
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF---QQLINAVDFCHSRGVYHRD 138
V + + + E+ G L + + + +E +A Q+ +A+++ + HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
+ K++DFGLS L H P + APE + + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTA--HAGAKFPIKWTAPESLAYNKFSI-KS 191
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-AEFKCPNWFPPEVRKLLCKILDPNP 255
D+W+ GV+L+ + G P+ + ++Y + K + P P +V +L+ NP
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 251
Query: 256 STRISMAKIRES 267
S R S A+I ++
Sbjct: 252 SDRPSFAEIHQA 263
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 82
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 244 R 244
R
Sbjct: 257 R 257
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKXVNH 82
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 244 R 244
R
Sbjct: 257 R 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 46/269 (17%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNI 76
EV ++G+GAF V A+ + VA+K I+ + + + E+ + V HPNI
Sbjct: 12 EVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAFIV-----ELRQLSRVNHPNI 64
Query: 77 VQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK----LKEDAARRYFQQLINAVDFCHS- 131
V+LY A + + VMEYA+GG L+N + + A + Q V + HS
Sbjct: 65 VKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 132 --RGVYHRDIKPXXXXXXX-XXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
+ + HRD+KP KI DFG + C Q + + G+ A++APEV
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNK-GSAAWMAPEVFE 177
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNW---------- 238
Y EK D++S G++L+ ++ PF + IG F+ W
Sbjct: 178 GSNYS-EKCDVFSWGIILWEVITRRKPFDE---------IGGPAFRI-MWAVHNGTRPPL 226
Query: 239 ---FPPEVRKLLCKILDPNPSTRISMAKI 264
P + L+ + +PS R SM +I
Sbjct: 227 IKNLPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 75
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIK 133
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 190
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 191 LGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 244 R 244
R
Sbjct: 250 R 250
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 46/269 (17%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNI 76
EV ++G+GAF V A+ + VA+K I+ + + + E+ + V HPNI
Sbjct: 11 EVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAFIV-----ELRQLSRVNHPNI 63
Query: 77 VQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK----LKEDAARRYFQQLINAVDFCHS- 131
V+LY A + + VMEYA+GG L+N + + A + Q V + HS
Sbjct: 64 VKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 132 --RGVYHRDIKPXXXXXXX-XXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVIN 188
+ + HRD+KP KI DFG + C Q + + G+ A++APEV
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNK-GSAAWMAPEVFE 176
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNW---------- 238
Y EK D++S G++L+ ++ PF + IG F+ W
Sbjct: 177 GSNYS-EKCDVFSWGIILWEVITRRKPFDE---------IGGPAFRI-MWAVHNGTRPPL 225
Query: 239 ---FPPEVRKLLCKILDPNPSTRISMAKI 264
P + L+ + +PS R SM +I
Sbjct: 226 IKNLPKPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
EVI GY E VDIWS G ++ ++ G + F ++ I+ + K+
Sbjct: 195 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 108
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 223
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 86
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 201
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 261
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 262 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 81
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 139
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMVPFVVTRYYRAP 196
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ G + F ++ I+ + K I + CP +
Sbjct: 197 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 255
Query: 241 PEVR 244
P VR
Sbjct: 256 PTVR 259
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-RIVRH 73
KYE+ + LG+GA+ V+ + RT + VAVK I D A + REI ++ + H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGH 68
Query: 74 PNIVQLYEVMATKSK--IFFVMEYAKGGELFNKVAKGKLKEDAARRYF-QQLINAVDFCH 130
NIV L V+ + ++ V +Y + + V + + E ++Y QLI + + H
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLS-------------ALAQCKHQDG------L 171
S G+ HRD+KP K++DFGLS L+ ++ + +
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 172 LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLI-EMYRKIGK 230
L T Y APE++ + +D+WS G +L +L G F S+ + ++ R IG
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 231 AEF 233
+F
Sbjct: 247 IDF 249
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 120/296 (40%), Gaps = 55/296 (18%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +VAVK + + A + RE+ +++ V H
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKCVNH 82
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V +L + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A C + ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-CT--NFMMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI------GKAEFKC------ 235
GY VDIWS G ++ L+ G + F ++ I+ + K+ AEF
Sbjct: 198 LGMGY-AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 236 -------------------PNW-FPPE----------VRKLLCKILDPNPSTRISM 261
P+W FP E R LL K+L +P RIS+
Sbjct: 257 RNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 312
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 86
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 201
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 261
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 262 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 82
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 197
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 257
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 258 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 93
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 208
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 268
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 269 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 79
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 194
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 254
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 255 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 78
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 193
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 253
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 254 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKXVNH 82
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 198 LGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 244 R 244
R
Sbjct: 257 R 257
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 189
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 189
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 12 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 67
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGY 192
HRD+K KI DFGL+ G+ ++APEVI ++ Y
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 187 SFQS-DVYAFGIVLYELMTGQLPYSNIN 213
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 153
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 268
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 328
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 329 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 75
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 190
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 250
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 251 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 102
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 217
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 277
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 278 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 32 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 87
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 88 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 146
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD-- 193
HRD+K KI DFGL+ G+ ++APEVI + +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNIN 233
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 108
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 223
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A +++VA+K + + A + RE+ +M+
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 117
Query: 71 VRHPNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 175
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 232
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ + F + I+ + K I + CP +
Sbjct: 233 EVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 241 PEVR 244
P VR
Sbjct: 292 PTVR 295
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 87
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 202
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 262
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 263 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 40 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 95
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +TK ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 96 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD-- 193
HRD+K KI DFGL+ G+ ++APEVI + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G + P+ +E+ LG G F V T + VA+K ++ + ++
Sbjct: 3 GRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWC 60
Query: 63 REISVMRIVRHPNIVQLYEV------MATKSKIFFVMEYAKGGELFNKVAKGK----LKE 112
EI +M+ + HPN+V EV +A MEY +GG+L + + + LKE
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 113 DAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXX---XXXXXKISDFGLSALAQCKHQD 169
R + +A+ + H + HRD+KP KI D G A+ Q
Sbjct: 121 GPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQG 177
Query: 170 GLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
L GT Y+APE++ +K Y VD WS G + F + G+ PF
Sbjct: 178 ELCTEFVGTLQYLAPELLEQKKYTV-TVDYWSFGTLAFECITGFRPF 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 112
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 227
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 287
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 288 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 110
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 225
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 285
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 286 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 3 GMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK 62
G + P+ +E+ LG G F V T + VA+K ++ + ++
Sbjct: 4 GRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWC 61
Query: 63 REISVMRIVRHPNIVQLYEV------MATKSKIFFVMEYAKGGELFNKVAKGK----LKE 112
EI +M+ + HPN+V EV +A MEY +GG+L + + + LKE
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 121
Query: 113 DAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXX---XXXXXKISDFGLSALAQCKHQD 169
R + +A+ + H + HRD+KP KI D G A+ Q
Sbjct: 122 GPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQG 178
Query: 170 GLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
L GT Y+APE++ +K Y VD WS G + F + G+ PF
Sbjct: 179 ELCTEFVGTLQYLAPELLEQKKYTV-TVDYWSFGTLAFECITGFRPF 224
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 83
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 198
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 199 LGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 244 R 244
R
Sbjct: 258 R 258
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
VG+ +G G+F VY + + VAVK+++ L K E+ V+R RH NI+
Sbjct: 12 VGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNIL 67
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVY 135
L+ +T ++ V ++ +G L++ + + K + +Q +D+ H++ +
Sbjct: 68 -LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---NRKGY 192
HRD+K KI DFGL+ + G+ ++APEVI ++ Y
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+ D+++ G+VL+ L+ G LP+ + N
Sbjct: 187 SFQS-DVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A +++VA+K + + A + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 71 VRHPNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ + F + I+ + K I + CP +
Sbjct: 195 EVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 241 PEVR 244
P VR
Sbjct: 254 PTVR 257
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 83
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 198
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 199 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 244 R 244
R
Sbjct: 258 R 258
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 81
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 139
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 196
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 197 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 255
Query: 244 R 244
R
Sbjct: 256 R 256
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKXVNH 82
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 198 LGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 244 R 244
R
Sbjct: 257 R 257
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 189
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 82
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 197
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 198 LGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 244 R 244
R
Sbjct: 257 R 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A +++VA+K + + A + RE+ +M+
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 117
Query: 71 VRHPNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 175
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 232
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ + F + I+ + K I + CP +
Sbjct: 233 EVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 241 PEVR 244
P VR
Sbjct: 292 PTVR 295
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A +++VA+K + + A + RE+ +M+
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 73
Query: 71 VRHPNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 131
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 188
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ + F + I+ + K I + CP +
Sbjct: 189 EVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 241 PEVR 244
P VR
Sbjct: 248 PTVR 251
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 76
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 191
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 192 LGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 244 R 244
R
Sbjct: 251 R 251
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++Y+ + +G GA V A +++VA+K + + A + RE+ +M+ V H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCVNH 75
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
NI+ L V + ++ VME +V + +L + Q++ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 133
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI 187
HS G+ HRD+KP KI DFGL+ A ++ T Y APEVI
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI 190
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FPPEV 243
GY E VDIWS G ++ ++ + F + I+ + K I + CP + P V
Sbjct: 191 LGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 244 R 244
R
Sbjct: 250 R 250
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + +DK + RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K ++ V++Y E +VA K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYR 189
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMEPEVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VDIWS G ++ ++ + F + I+ + K I + CP +
Sbjct: 195 EVILGMGYK-ENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQ 253
Query: 241 PEVR 244
P VR
Sbjct: 254 PTVR 257
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 26/215 (12%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
+LGQGA A V+ R +T A+KV + +R D RE V++ + H NIV+L+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLF 73
Query: 81 ---EVMATKSKIFFVMEYAKGGELFNKVAKGK----LKEDAARRYFQQLINAVDFCHSRG 133
E T+ K+ +ME+ G L+ + + L E + ++ ++ G
Sbjct: 74 AIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 134 VYHRDIKPXXXXXX----XXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
+ HR+IKP K++DFG + + Q L+ GT Y+ P++ R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY---GTEEYLHPDMYER 189
Query: 190 --------KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
K Y G VD+WS GV + G LPF
Sbjct: 190 AVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 26/215 (12%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLY 80
+LGQGA A V+ R +T A+KV + +R D RE V++ + H NIV+L+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLF 73
Query: 81 ---EVMATKSKIFFVMEYAKGGELFNKVAKGK----LKEDAARRYFQQLINAVDFCHSRG 133
E T+ K+ +ME+ G L+ + + L E + ++ ++ G
Sbjct: 74 AIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 134 VYHRDIKPXXXXXXX----XXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINR 189
+ HR+IKP K++DFG A+ D + GT Y+ P++ R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFG---AARELEDDEQFVSLYGTEEYLHPDMYER 189
Query: 190 --------KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
K Y G VD+WS GV + G LPF
Sbjct: 190 AVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 9/213 (4%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG+G +A VY +S T+ VA+K I + G RE+S+++ ++H NIV L++
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 82 VMATKSKIFFVMEYA-KGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIK 140
++ T+ + V EY K + + + + + QL+ + +CH + V HRD+K
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 141 PXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIW 200
P K++DFGL+ + T Y P+++ ++D+W
Sbjct: 128 PQNLLINERGELKLADFGLARAKSIPTKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 201 SCGVVLFVLLAGYLPFHDSNLIE----MYRKIG 229
G + + + G F S + E ++R +G
Sbjct: 186 GVGCIFYEMATGRPLFPGSTVEEQLHFIFRILG 218
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMEPEVVTRYYRAP 194
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VD+WS G ++ ++ + F + I+ + K I + CP +
Sbjct: 195 EVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 241 PEVR 244
P VR
Sbjct: 254 PTVR 257
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 84
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 142
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 199
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VD+WS G ++ ++ + F + I+ + K I + CP +
Sbjct: 200 EVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 258
Query: 241 PEVR 244
P VR
Sbjct: 259 PTVR 262
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + + K + RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 189
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EFK P W PPE L ++L+ P+ R++ + S+F
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ ++Y+ + +G GA V A ++VA+K + + A + RE+ +M+
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 73
Query: 71 VRHPNIVQLYEVMATKSK------IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
V H NI+ L V + ++ VME +V + +L + Q++
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 131
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAP 184
+ HS G+ HRD+KP KI DFGL+ A ++ T Y AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAP 188
Query: 185 EVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK-IGKAEFKCPNW---FP 240
EVI GY E VD+WS G ++ ++ + F + I+ + K I + CP +
Sbjct: 189 EVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 241 PEVR 244
P VR
Sbjct: 248 PTVR 251
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 19 GRLLGQGAFAKVYYARSIRTNQSVAVK----VIDKDKIMRVGLADQIKREISVMRIVRHP 74
G G+G F VY + N +VAVK ++D I L Q +EI V +H
Sbjct: 27 GNKXGEGGFGVVY--KGYVNNTTVAVKKLAAMVD---ITTEELKQQFDQEIKVXAKCQHE 81
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVA----KGKLKEDAARRYFQQLINAVDFCH 130
N+V+L + + V Y G L ++++ L + Q N ++F H
Sbjct: 82 NLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
HRDIK KISDFGL+ ++ Q GT AY APE + +
Sbjct: 142 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--R 199
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
G K DI+S GVVL ++ G LP D +
Sbjct: 200 GEITPKSDIYSFGVVLLEIITG-LPAVDEH 228
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK++ K ++IKREI ++ +R
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KNKIKREIKILENLRG 90
Query: 74 -PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
PNI+ L +++ V E+ + K L + R Y +++ A+D+CH
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 131 SRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VIN 188
S G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 206 YQMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 33/268 (12%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI----DKDKIMRVGLADQIKRE 64
P++ + E + +G+G F V+ R ++ VA+K + + + + + +RE
Sbjct: 14 PTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE 73
Query: 65 ISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKV--AKGKLKEDAARRYFQQL 122
+ +M + HPNIV+LY +M ++ VME+ G+L++++ +K R +
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 123 INAVDFCHSRG--VYHRDIKP-----XXXXXXXXXXXKISDFGLSALAQCKHQ-DGLLHT 174
+++ ++ + HRD++ K++DFGLS Q H GLL
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--QQSVHSVSGLL-- 187
Query: 175 TCGTPAYVAPEVIN--RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN-----LIEMYRK 227
G ++APE I + Y EK D +S ++L+ +L G PF + + I M R+
Sbjct: 188 --GNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 228 IGKAEFKCPNWFPPEVRKL--LCKILDP 253
G P PP +R + LC DP
Sbjct: 245 EGLRP-TIPEDCPPRLRNVIELCWSGDP 271
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
L +Y + LG G V+ A ++ VA+K I V A REI ++R +
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA---LREIKIIRRL 65
Query: 72 RHPNIVQLYEVMATK--------------SKIFFVMEYAKGGELFNKVAKGKLKEDAARR 117
H NIV+++E++ + ++ V EY + +L N + +G L E+ AR
Sbjct: 66 DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARL 124
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXX-XXXXXXXXKISDFGLSALAQCKH-QDGLLHTT 175
+ QL+ + + HS V HRD+KP KI DFGL+ + + G L
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 176 CGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
T Y +P ++ + +D+W+ G + +L G F ++ +E + I
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 118/276 (42%), Gaps = 34/276 (12%)
Query: 20 RLLGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
R LG+G F KV Y T + VAVK + K + +AD +K+EI ++R + H N
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIAD-LKKEIEILRNLYHEN 72
Query: 76 IVQLYEVMATK---SKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCH 130
IV+ Y+ + T+ + I +ME+ G L + K K K + + +Y Q+ +D+
Sbjct: 73 IVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY-VAPE-VIN 188
SR HRD+ KI DFGL+ + + + +P + APE ++
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---------------- 232
K Y D+WS GV L LL Y S + + IG
Sbjct: 192 SKFYIAS--DVWSFGVTLHELLT-YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 248
Query: 233 -FKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
CP P EV +L+ K + PS R S + E
Sbjct: 249 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEG 284
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 118/276 (42%), Gaps = 34/276 (12%)
Query: 20 RLLGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
R LG+G F KV Y T + VAVK + K + +AD +K+EI ++R + H N
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIAD-LKKEIEILRNLYHEN 84
Query: 76 IVQLYEVMATK---SKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCH 130
IV+ Y+ + T+ + I +ME+ G L + K K K + + +Y Q+ +D+
Sbjct: 85 IVK-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY-VAPE-VIN 188
SR HRD+ KI DFGL+ + + + +P + APE ++
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 189 RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAE---------------- 232
K Y D+WS GV L LL Y S + + IG
Sbjct: 204 SKFYIAS--DVWSFGVTLHELLT-YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 233 -FKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRES 267
CP P EV +L+ K + PS R S + E
Sbjct: 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEG 296
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 46/283 (16%)
Query: 2 FGMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
FGMD ++ L+G G F +V+ A+ ++ +K + + ++
Sbjct: 9 FGMD----------FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKA 51
Query: 62 KREISVMRIVRHPNIVQL--------YEVMAT-------KSKIFFV-MEYAKGGELFNKV 105
+RE+ + + H NIV Y+ + K+K F+ ME+ G L +
Sbjct: 52 EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI 111
Query: 106 AK---GKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSAL 162
K KL + A F+Q+ VD+ HS+ + +RD+KP KI DFGL
Sbjct: 112 EKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTS 171
Query: 163 AQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLL-AGYLPFHDSNL 221
+ DG + GT Y++PE I+ + Y G++VD+++ G++L LL F S
Sbjct: 172 LK---NDGKRXRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKF 227
Query: 222 IEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
R + + F + + LL K+L P R + ++I
Sbjct: 228 FTDLR-----DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 265
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + + K + RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKGGELFNKVA------KGKLKEDAARRYFQQLI 123
IV+L Y K +++ V++Y E +VA K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 124 NAVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYV 182
++ + HS G+ HRDIKP K+ DFG + Q + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYR 189
Query: 183 APEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK-------- 230
APE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 231 -----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EF P W PPE L ++L+ P+ R++ + S+F
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 125/296 (42%), Gaps = 52/296 (17%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
Y +++G G+F VY A+ + + VA+K + + K + RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 76 IVQL----YEVMATKSKIFF--VMEYAKG-----GELFNKVAKGKLKEDAARRYFQQLIN 124
IV+L Y K +++ V++Y +++ AK L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSR-AKQTLPVIYVKLYMYQLFR 133
Query: 125 AVDFCHSRGVYHRDIKPXXXXX-XXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
++ + HS G+ HRDIKP K+ DFG + Q + + C Y A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRA 190
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DS---NLIEMYRKIGK--------- 230
PE+I +D+WS G VL LL G F DS L+E+ + +G
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 231 ----AEFKCPN-----W-------FPPEVRKLLCKILDPNPSTRISMAKIRESSWF 270
EF P W PPE L ++L+ P+ R++ + S+F
Sbjct: 251 NPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG+G+F +V+ + +T AVK + + ++ RV E+ + P IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRV-------EELVACAGLSSPRIVPLYG 131
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGVYHRDIK 140
+ + ME +GG L + + G L ED A Y Q + +++ H+R + H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 141 P-XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTC------GTPAYVAPEVINRKGYD 193
+ DFG A C DGL + GT ++APEV+ K D
Sbjct: 192 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 194 GEKVDIWSCGVVLFVLLAGYLPF 216
KVDIWS ++ +L G P+
Sbjct: 249 A-KVDIWSSCCMMLHMLNGCHPW 270
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 117/299 (39%), Gaps = 51/299 (17%)
Query: 16 YEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDK--------------DKIMRVGLADQI 61
Y + R L QG F K+ + N+ A+K +K DKI D
Sbjct: 33 YRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 62 KREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELF---------NKVAKGKLKE 112
K E+ ++ +++ + ++ +++ + EY + + +K +
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 113 DAARRYFQQLINAVDFCHS-RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGL 171
+ + ++N+ + H+ + + HRD+KP K+SDFG S K G
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG- 209
Query: 172 LHTTCGTPAYVAPEVI-NRKGYDGEKVDIWSCGVVLFVLLAGYLPFH-DSNLIEMYRKIG 229
+ GT ++ PE N Y+G KVDIWS G+ L+V+ +PF +L+E++ I
Sbjct: 210 ---SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR 266
Query: 230 KAEFKCP-------------------NWFPPEVRKLLCKILDPNPSTRISMAKIRESSW 269
+ P N+ E L L NP+ RI+ + W
Sbjct: 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 22/264 (8%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F VY T VA + +D+ + + K E ++ ++HPNIV+ Y+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCEL-QDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 82 ----VMATKSKIFFVMEYAKGGELFNKVAKGKL-KEDAARRYFQQLINAVDFCHSRG--V 134
+ K I V E G L + + K+ K R + +Q++ + F H+R +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 135 YHRDIK-PXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD 193
HRD+K KI D GL+ L + ++ GTP + APE K YD
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI----GTPEFXAPEXYEEK-YD 207
Query: 194 GEKVDIWSCGVVLFVLLAGYLPFHD-SNLIEMYRKIGKAEFKCPNWFP----PEVRKLLC 248
E VD+++ G P+ + N ++YR++ P F PEV++++
Sbjct: 208 -ESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG--VKPASFDKVAIPEVKEIIE 264
Query: 249 KILDPNPSTRISMAKIRESSWFRK 272
+ N R S+ + ++F++
Sbjct: 265 GCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD--QIKREISVMRIVRHPNIVQL 79
+G G+F VY + + VAVK++ K++ + E++V+R RH NI+ L
Sbjct: 44 IGSGSFGTVYKGK---WHGDVAVKIL---KVVDPTPEQFQAFRNEVAVLRKTRHVNIL-L 96
Query: 80 YEVMATKSKIFFVMEYAKGGELFNK--VAKGKLKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ TK + V ++ +G L+ V + K + +Q +D+ H++ + HR
Sbjct: 97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHR 156
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYD--GE 195
D+K KI DFGL+ + + G+ ++APEVI + +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 196 KVDIWSCGVVLFVLLAGYLPF-HDSNLIEMYRKIGKA 231
+ D++S G+VL+ L+ G LP+ H +N ++ +G+
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG 253
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 33/268 (12%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI----DKDKIMRVGLADQIKRE 64
P++ + E + +G+G F V+ R ++ VA+K + + + + + +RE
Sbjct: 14 PTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE 73
Query: 65 ISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKV--AKGKLKEDAARRYFQQL 122
+ +M + HPNIV+LY +M ++ VME+ G+L++++ +K R +
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 123 INAVDFCHSRG--VYHRDIKP-----XXXXXXXXXXXKISDFGLSALAQCKHQ-DGLLHT 174
+++ ++ + HRD++ K++DFG S Q H GLL
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--QQSVHSVSGLL-- 187
Query: 175 TCGTPAYVAPEVIN--RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN-----LIEMYRK 227
G ++APE I + Y EK D +S ++L+ +L G PF + + I M R+
Sbjct: 188 --GNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 228 IGKAEFKCPNWFPPEVRKL--LCKILDP 253
G P PP +R + LC DP
Sbjct: 245 EGLRP-TIPEDCPPRLRNVIELCWSGDP 271
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD--QIKREISVMRIV 71
+ Y + L+G+G++ VY A T ++VA+K +++ M L D +I REI+++ +
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR---MFEDLIDCKRILREITILNRL 82
Query: 72 RHPNIVQLYEVMATKS-----KIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLIN 124
+ I++LY+++ +++ V+E A K+ K L E+ + L+
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEEHIKTILYNLLL 140
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCK-----------------H 167
+F H G+ HRD+KP K+ DFGL+ + H
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 168 QDGL---LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLL 210
L L + T Y APE+I + + +DIWS G + LL
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F +V+ + +T AVK + + ++ RV E+ + P IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRV-------EELVACAGLSSPRIVPLYG 117
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGVYHRDIK 140
+ + ME +GG L + + G L ED A Y Q + +++ H+R + H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 141 P-XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTC------GTPAYVAPEVINRKGYD 193
+ DFG A C DGL + GT ++APEV+ K D
Sbjct: 178 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 194 GEKVDIWSCGVVLFVLLAGYLPF 216
KVDIWS ++ +L G P+
Sbjct: 235 A-KVDIWSSCCMMLHMLNGCHPW 256
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 33/268 (12%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVI----DKDKIMRVGLADQIKRE 64
P++ + E + +G+G F V+ R ++ VA+K + + + + + +RE
Sbjct: 14 PTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE 73
Query: 65 ISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKV--AKGKLKEDAARRYFQQL 122
+ +M + HPNIV+LY +M ++ VME+ G+L++++ +K R +
Sbjct: 74 VFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 123 INAVDFCHSRG--VYHRDIKP-----XXXXXXXXXXXKISDFGLSALAQCKHQ-DGLLHT 174
+++ ++ + HRD++ K++DF LS Q H GLL
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS--QQSVHSVSGLL-- 187
Query: 175 TCGTPAYVAPEVIN--RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN-----LIEMYRK 227
G ++APE I + Y EK D +S ++L+ +L G PF + + I M R+
Sbjct: 188 --GNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 228 IGKAEFKCPNWFPPEVRKL--LCKILDP 253
G P PP +R + LC DP
Sbjct: 245 EGLRP-TIPEDCPPRLRNVIELCWSGDP 271
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++YE+ +G GA+ V AR T Q VA+K I + V A + RE+ +++ +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKH 113
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAV 126
NI+ + +++ ++ V++ + +L + + L + R + QL+ +
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS---ALAQCKHQDGLLHTTCGTPAYVA 183
+ HS V HRD+KP KI DFG++ + +HQ + T Y A
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ-YFMTEYVATRWYRA 231
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
PE++ + +D+WS G + +LA F N + + I
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 276
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 25/281 (8%)
Query: 10 SVLTEKYEVGRL----------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD 59
+ LT+K +VG L LG G V+ + +A K+I + ++ + +
Sbjct: 11 AFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRN 68
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRY 118
QI RE+ V+ P IV Y + +I ME+ GG L + K G++ E +
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 128
Query: 119 FQQLINAVDFCHSR-GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
+I + + + + HRD+KP K+ DFG+S + D + ++ G
Sbjct: 129 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVG 184
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKI-GKAE 232
T +Y++PE + Y + DIWS G+ L + G P + + E+ I +
Sbjct: 185 TRSYMSPERLQGTHYSVQS-DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP 243
Query: 233 FKCPNW-FPPEVRKLLCKILDPNPSTRISMAKIRESSWFRK 272
K P+ F E + + K L NP+ R + ++ ++ ++
Sbjct: 244 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 284
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
+G+G+F +V+ + +T AVK + + ++ RV E+ + P IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRV-------EELVACAGLSSPRIVPLYG 133
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSRGVYHRDIK 140
+ + ME +GG L + + G L ED A Y Q + +++ H+R + H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 141 P-XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTC------GTPAYVAPEVINRKGYD 193
+ DFG A C DGL + GT ++APEV+ K D
Sbjct: 194 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 194 GEKVDIWSCGVVLFVLLAGYLPF 216
KVDIWS ++ +L G P+
Sbjct: 251 A-KVDIWSSCCMMLHMLNGCHPW 272
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++YE+ +G GA+ V AR T Q VA+K I + V A + RE+ +++ +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKH 112
Query: 74 PNIVQLYEVMATK------SKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAV 126
NI+ + +++ ++ V++ + +L + + L + R + QL+ +
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS---ALAQCKHQDGLLHTTCGTPAYVA 183
+ HS V HRD+KP KI DFG++ + +HQ + T Y A
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ-YFMTEYVATRWYRA 230
Query: 184 PEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
PE++ + +D+WS G + +LA F N + + I
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 275
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGL-SALAQCKHQDGLLHTT-- 175
F Q+ AV+F HS+G+ HRD+KP K+ DFGL +A+ Q + + +L
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 176 -------CGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKI 228
GT Y++PE I+ Y KVDI+S G++LF LL + S +E R I
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNY-SHKVDIFSLGLILFELLYSF-----STQMERVRII 283
Query: 229 GKA-EFKCPNWFP---PEVRKLLCKILDPNPSTRISMAKIRESSWF 270
K P F P+ ++ +L P+P+ R I E++ F
Sbjct: 284 TDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 29/311 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 8 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 65
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 66 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 123
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + GT Y+ PE
Sbjct: 124 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 183 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 240
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFR---KGMNQKQKQKVTESKD 287
E + P+ +++ +L L +P RIS+ ++ + + +NQ K E K
Sbjct: 241 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 300
Query: 288 AASQDAGASAP 298
Q G ++P
Sbjct: 301 VLGQLVGLNSP 311
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG+G+F +V+ +T AVK + + ++ R E+ + P IV LY
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRA-------EELMACAGLTSPRIVPLYG 152
Query: 82 VMATKSKIFFVMEYAKGGELFNKV-AKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIK 140
+ + ME +GG L V +G L ED A Y Q + +++ HSR + H D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 141 P-XXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTC------GTPAYVAPEVINRKGYD 193
+ DFG A C DGL + GT ++APEV+ + D
Sbjct: 213 ADNVLLSSDGSHAALCDFG---HAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 194 GEKVDIWSCGVVLFVLLAGYLPF 216
KVD+WS ++ +L G P+
Sbjct: 270 A-KVDVWSSCCMMLHMLNGCHPW 291
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R+LG+G F +V+ + T + A K ++K ++ + E ++ V IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-----GKLKEDAARRYFQQLINAVDFCHSRGV 134
TK+ + VM GG++ + +E A Y Q+++ ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
+RD+KP +ISD GL+ + K GTP ++APE++ + YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYD- 367
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNL----IEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
VD ++ GV L+ ++A PF E+ +++ + P+ F P + +
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 251 LDPNPSTRISM 261
L +P R+
Sbjct: 428 LQKDPEKRLGF 438
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 30/317 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 4 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 61
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 62 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 119
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + GT Y+ PE
Sbjct: 120 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 179 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 236
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFR---KGMNQKQKQKVTESKD 287
E + P+ +++ +L L +P RIS+ ++ + + +NQ K E K
Sbjct: 237 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 296
Query: 288 AASQDAGAS-APQGSSS 303
Q G + P+GS++
Sbjct: 297 VLGQLVGLNLVPRGSAA 313
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 33/277 (11%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMR-IVRH 73
+ V R+L +G FA VY A+ + + + A+K + ++ + I +E+ M+ + H
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEK---NRAIIQEVCFMKKLSGH 85
Query: 74 PNIVQLYEVMAT--------KSKIFFVMEYAKGG--ELFNKV-AKGKLKEDAARRYFQQL 122
PNIVQ + +++ + E KG E K+ ++G L D + F Q
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 123 INAVDFCHSRG--VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQD--------GLL 172
AV H + + HRD+K K+ DFG SA + D L+
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG-SATTISHYPDYSWSAQRRALV 204
Query: 173 H---TTCGTPAYVAPEVINRKGY--DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRK 227
T TP Y PE+I+ GEK DIW+ G +L++L PF D + +
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN- 263
Query: 228 IGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
GK + L+ +L NP R+S+A++
Sbjct: 264 -GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R+LG+G F +V+ + T + A K ++K ++ + E ++ V IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-----GKLKEDAARRYFQQLINAVDFCHSRGV 134
TK+ + VM GG++ + +E A Y Q+++ ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
+RD+KP +ISD GL+ + K GTP ++APE++ + YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYD- 367
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNL----IEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
VD ++ GV L+ ++A PF E+ +++ + P+ F P + +
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 251 LDPNPSTRISM 261
L +P R+
Sbjct: 428 LQKDPEKRLGF 438
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R+LG+G F +V+ + T + A K ++K ++ + E ++ V IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-----GKLKEDAARRYFQQLINAVDFCHSRGV 134
TK+ + VM GG++ + +E A Y Q+++ ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
+RD+KP +ISD GL+ + K GTP ++APE++ + YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYD- 367
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNL----IEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
VD ++ GV L+ ++A PF E+ +++ + P+ F P + +
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 251 LDPNPSTRISM 261
L +P R+
Sbjct: 428 LQKDPEKRLGF 438
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 29/311 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 5 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 62
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 63 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 120
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + GT Y+ PE
Sbjct: 121 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 237
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFR---KGMNQKQKQKVTESKD 287
E + P+ +++ +L L +P RIS+ ++ + + +NQ K E K
Sbjct: 238 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 297
Query: 288 AASQDAGASAP 298
Q G ++P
Sbjct: 298 VLGQLVGLNSP 308
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD--QIKREISVMRIV 71
+ YE+ L+G+G++ VY A N++VA+K +++ M L D +I REI+++ +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR---MFEDLIDCKRILREITILNRL 84
Query: 72 RHPNIVQLYEVMATKS-----KIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLIN 124
+ I++L++++ + +++ V+E A K+ K L E + L+
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 125 AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCK------------------ 166
F H G+ HRD+KP KI DFGL+
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 167 --HQDGL---LHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLL 210
H L L + T Y APE+I + +DIWS G + LL
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R+LG+G F +V+ + T + A K ++K ++ + E ++ V IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAK-----GKLKEDAARRYFQQLINAVDFCHSRGV 134
TK+ + VM GG++ + +E A Y Q+++ ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
+RD+KP +ISD GL+ + K GTP ++APE++ + YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 195 EKVDIWSCGVVLFVLLAGYLPFHDSNL----IEMYRKIGKAEFKCPNWFPPEVRKLLCKI 250
VD ++ GV L+ ++A PF E+ +++ + P+ F P + +
Sbjct: 369 -SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 251 LDPNPSTRISM 261
L +P R+
Sbjct: 428 LQKDPEKRLGF 438
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 29/311 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 52 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 109
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 167
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + GT Y+ PE
Sbjct: 168 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 284
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFR---KGMNQKQKQKVTESKD 287
E + P+ +++ +L L +P RIS+ ++ + + +NQ K E K
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 344
Query: 288 AASQDAGASAP 298
Q G ++P
Sbjct: 345 VLGQLVGLNSP 355
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH----PNIV 77
+G G +V+ R +T +AVK ++ R G ++ KR + + +V P IV
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVK-----QMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 78 QLYEVMATKSKIFFVMEY-AKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHSR-GVY 135
Q + T + +F ME E K +G + E + ++ A+ + + GV
Sbjct: 88 QCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI 147
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSA-LAQCKHQDGLLHTTCGTPAYVAPEVIN-----R 189
HRD+KP K+ DFG+S L K +D + G AY+APE I+ +
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD----RSAGCAAYMAPERIDPPDPTK 203
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPFHD 218
YD + D+WS G+ L L G P+ +
Sbjct: 204 PDYD-IRADVWSLGISLVELATGQFPYKN 231
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 12 LTEKYEVGRL----------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
LT+K +VG L LG G V+ + +A K+I + ++ + +QI
Sbjct: 56 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQI 113
Query: 62 KREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQ 120
RE+ V+ P IV Y + +I ME+ GG L + K G++ E +
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 173
Query: 121 QLINAVDFCHSR-GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP 179
+I + + + + HRD+KP K+ DFG+S + D + ++ GT
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTR 229
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
+Y++PE + Y + DIWS G+ L + G P + E+ G
Sbjct: 230 SYMSPERLQGTHYSVQS-DIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 278
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 59/296 (19%)
Query: 2 FGMDHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
FGMD ++ L+G G F +V+ A+ ++ ++ + + ++
Sbjct: 10 FGMD----------FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKA 52
Query: 62 KREISVMRIVRHPNIVQL----------------------YEVMATKSK-------IFFV 92
+RE+ + + H NIV Y+ +K+ +F
Sbjct: 53 EREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQ 112
Query: 93 MEYAKGGELFNKVAK---GKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXX 149
ME+ G L + K KL + A F+Q+ VD+ HS+ + HRD+KP
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
Query: 150 XXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVL 209
KI DFGL + DG + GT Y++PE I+ + Y G++VD+++ G++L L
Sbjct: 173 KQVKIGDFGLVTSLK---NDGKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAEL 228
Query: 210 L-AGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
L F S R + + F + + LL K+L P R + ++I
Sbjct: 229 LHVCDTAFETSKFFTDLR-----DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 279
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG+G+F +V+ +T AVK + + ++ R E+ + P IV LY
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRA-------EELMACAGLTSPRIVPLYG 133
Query: 82 VMATKSKIFFVMEYAKGGELFNKV-AKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIK 140
+ + ME +GG L V +G L ED A Y Q + +++ HSR + H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 141 P-XXXXXXXXXXXKISDFGLSALAQCKHQDGL---LHT---TCGTPAYVAPEVINRKGYD 193
+ DFG A C DGL L T GT ++APEV+ + D
Sbjct: 194 ADNVLLSSDGSHAALCDFG---HAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 194 GEKVDIWSCGVVLFVLLAGYLPF 216
KVD+WS ++ +L G P+
Sbjct: 251 A-KVDVWSSCCMMLHMLNGCHPW 272
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 33/240 (13%)
Query: 10 SVLTEKYEVGRL----------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD 59
+ LT+K +VG L LG G V + + +A K+I + ++ + +
Sbjct: 2 AFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRN 59
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF 119
QI RE+ V+ P IV Y + +I ME+ GG L ++V LKE A+R
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQV----LKE--AKRIP 112
Query: 120 QQLINAVDFCHSRG---------VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
++++ V RG + HRD+KP K+ DFG+S + D
Sbjct: 113 EEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDS 168
Query: 171 LLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGK 230
+ ++ GT +Y+APE + Y + DIWS G+ L L G P + E+ G+
Sbjct: 169 MANSFVGTRSYMAPERLQGTHYSVQS-DIWSMGLSLVELAVGRYPIPPPDAKELEAIFGR 227
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 50/280 (17%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMR---I 70
++++V R+ GQG F V + T SVA+K + +D R RE+ +M+ +
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-------NRELQIMQDLAV 75
Query: 71 VRHPNIVQLYEVMAT-----KSKIFF--VMEYAKGGELFNKVAKGKLKEDAA------RR 117
+ HPNIVQL T + I+ VMEY + ++ + + A +
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKV 133
Query: 118 YFQQLINAVDFCH--SRGVYHRDIKPXXXXXXXXX-XXKISDFGLSALAQCKHQDGLLHT 174
+ QLI ++ H S V HRDIKP K+ DFG SA + + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG-SAKKLSPSEPNVAYI 192
Query: 175 TCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN----LIEMYRKIGK 230
+ Y APE+I + VDIWS G + ++ G F N L E+ R +G
Sbjct: 193 C--SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG- 249
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPS-TRISMAKIRESSW 269
CP+ R++L K+ NPS T + + + W
Sbjct: 250 ----CPS------REVLRKL---NPSHTDVDLYNSKGIPW 276
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 19/232 (8%)
Query: 10 SVLTEKYEVGRL----------LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLAD 59
+ LT+K +VG L LG G V+ + +A K+I + ++ + +
Sbjct: 19 AFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRN 76
Query: 60 QIKREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRY 118
QI RE+ V+ P IV Y + +I ME+ GG L + K G++ E +
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKV 136
Query: 119 FQQLINAVDFCHSR-GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
+I + + + + HRD+KP K+ DFG+S + D + ++ G
Sbjct: 137 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVG 192
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
T +Y++PE + Y + DIWS G+ L + G P + E+ G
Sbjct: 193 TRSYMSPERLQGTHYSVQS-DIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 243
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G V+ + +A K+I + ++ + +QI RE+ V+ P IV Y
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR-GVYHRDI 139
+ +I ME+ GG L + K G++ E + +I + + + + HRD+
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
KP K+ DFG+S + D + + GT +Y++PE + Y + DI
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSG----QLIDEMANEFVGTRSYMSPERLQGTHYSVQS-DI 189
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKI-GKAEFKCPNW-FPPEVRKLLCKILDPNPST 257
WS G+ L + G P + E+ I + K P+ F E + + K L NP+
Sbjct: 190 WSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAE 249
Query: 258 RISMAKIRESSWFRK 272
R + ++ ++ ++
Sbjct: 250 RADLKQLMVHAFIKR 264
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRV--GLAD--QIKREISV 67
+ ++YE+ L+G G++ V A + VA+K KI+RV L D +I REI++
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK-----KILRVFEDLIDCKRILREIAI 105
Query: 68 MRIVRHPNIVQLYEVMATKS-----KIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQ 120
+ + H ++V++ +++ K +++ V+E A F K+ + L E +
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLY 163
Query: 121 QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-------------------- 160
L+ V + HS G+ HRD+KP K+ DFGL+
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRED 223
Query: 161 --ALAQCKHQDGLLHTTCG---TPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLL 210
L H L G T Y APE+I + E +D+WS G + LL
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 29/311 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 52 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 109
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 167
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + G Y+ PE
Sbjct: 168 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 284
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFR---KGMNQKQKQKVTESKD 287
E + P+ +++ +L L +P RIS+ ++ + + +NQ K E K
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 344
Query: 288 AASQDAGASAP 298
Q G ++P
Sbjct: 345 VLGQLVGLNSP 355
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 109/263 (41%), Gaps = 49/263 (18%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V Y + R VA+K+I + + D+ E VM + H +VQLY
Sbjct: 32 LGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NAVDFCHSRGV 134
V + IF + EY G L N L+E R QQL+ A+++ S+
Sbjct: 87 VCTKQRPIFIITEYMANGCLLN-----YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKG 191
HRD+ K+SDFGLS D ++ G+ + PEV+
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSK 197
Query: 192 YDGEKVDIWSCGVVLFVLLA-GYLPF----------HDSNLIEMYR------KIGKAEFK 234
+ K DIW+ GV+++ + + G +P+ H + + +YR K+ +
Sbjct: 198 FSS-KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS 256
Query: 235 CPNWFP-----PEVRKLLCKILD 252
C W P + LL ILD
Sbjct: 257 C--WHEKADERPTFKILLSNILD 277
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V Y + R VA+K+I + + D+ E VM + H +VQLY
Sbjct: 16 LGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYG 70
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NAVDFCHSRGV 134
V + IF + EY G L N L+E R QQL+ A+++ S+
Sbjct: 71 VCTKQRPIFIITEYMANGCLLN-----YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 125
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKG 191
HRD+ K+SDFGLS D ++ G+ + PEV+
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSK 181
Query: 192 YDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ K DIW+ GV+++ + + G +P+
Sbjct: 182 FSS-KSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 21/265 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G V+ + +A K+I + ++ + +QI RE+ V+ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR-GVYHRDI 139
+ +I ME+ GG L + K G++ E + +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
KP K+ DFG+S + D + ++ GT +Y++PE + Y + DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS-DI 186
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRK-----------IGKAEFKCPNW-FPPEVRKLL 247
WS G+ L + G P + E R + + K P+ F E + +
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 246
Query: 248 CKILDPNPSTRISMAKIRESSWFRK 272
K L NP+ R + ++ ++ ++
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIKR 271
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 26/274 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 52 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 109
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 167
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + GT Y+ PE
Sbjct: 168 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 284
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
E + P+ +++ +L L +P RIS+ ++
Sbjct: 285 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH- 73
+YEV +++G+G+F +V A + +Q VA+K++ +K A++I RI+ H
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI-------RILEHL 150
Query: 74 --------PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA---ARRYFQQL 122
N++ + E ++ I E L+ + K K + + R++ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXX--KISDFGLSALAQCKHQDGLLHTTCGTPA 180
+ +D H + H D+KP K+ DFG S +HQ ++T +
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQR--VYTXIQSRF 264
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGY--LPFHD 218
Y APEVI Y G +D+WS G +L LL GY LP D
Sbjct: 265 YRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH- 73
+YEV +++G+G+F +V A + +Q VA+K++ +K A++I RI+ H
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI-------RILEHL 150
Query: 74 --------PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA---ARRYFQQL 122
N++ + E ++ I E L+ + K K + + R++ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXX--KISDFGLSALAQCKHQDGLLHTTCGTPA 180
+ +D H + H D+KP K+ DFG S +HQ ++T +
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQR--VYTXIQSRF 264
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGY--LPFHD 218
Y APEVI Y G +D+WS G +L LL GY LP D
Sbjct: 265 YRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V Y + R VA+K+I + + D+ E VM + H +VQLY
Sbjct: 17 LGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYG 71
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NAVDFCHSRGV 134
V + IF + EY G L N L+E R QQL+ A+++ S+
Sbjct: 72 VCTKQRPIFIITEYMANGCLLN-----YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKG 191
HRD+ K+SDFGLS D ++ G+ + PEV+
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSK 182
Query: 192 YDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ K DIW+ GV+++ + + G +P+
Sbjct: 183 FSS-KSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 26/274 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 24 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 81
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 82 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 139
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + GT Y+ PE
Sbjct: 140 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 256
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
E + P+ +++ +L L +P RIS+ ++
Sbjct: 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V Y + R VA+K+I + + D+ E VM + H +VQLY
Sbjct: 23 LGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYG 77
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NAVDFCHSRGV 134
V + IF + EY G L N L+E R QQL+ A+++ S+
Sbjct: 78 VCTKQRPIFIITEYMANGCLLN-----YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 132
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKG 191
HRD+ K+SDFGLS D ++ G+ + PEV+
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSK 188
Query: 192 YDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ K DIW+ GV+++ + + G +P+
Sbjct: 189 FSS-KSDIWAFGVLMWEIYSLGKMPY 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V Y + R VA+K+I + + D+ E VM + H +VQLY
Sbjct: 12 LGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYG 66
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NAVDFCHSRGV 134
V + IF + EY G L N L+E R QQL+ A+++ S+
Sbjct: 67 VCTKQRPIFIITEYMANGCLLN-----YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 121
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKG 191
HRD+ K+SDFGLS D ++ G+ + PEV+
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSK 177
Query: 192 YDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ K DIW+ GV+++ + + G +P+
Sbjct: 178 FSS-KSDIWAFGVLMWEIYSLGKMPY 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 13/255 (5%)
Query: 22 LGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG G+F V + A S +T SVAVK + D + + D RE++ M + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHSRGVY 135
+LY V+ T + V E A G L +++ K G RY Q+ + + S+
Sbjct: 85 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 136 HRDIKPXXXXXXXXXXXKISDFGL-SALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+ KI DFGL AL Q + A+ APE + + +
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF-S 202
Query: 195 EKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKIL 251
D W GV L+ + G P+ N ++ KI K + P P ++ ++ +
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 252 DPNPSTRISMAKIRE 266
P R + +R+
Sbjct: 263 AHKPEDRPTFVALRD 277
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 16/265 (6%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R+LG+G F +V + T + A K ++K +I + E ++ V +V L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 80 YEVMATKSKIFFVMEYAKGGEL---FNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYH 136
TK + V+ GG+L + + E A Y ++ ++ H + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 137 RDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEK 196
RD+KP +ISD GL+ + + GT Y+APEV+ + Y
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 197 VDIWSCGVVLFVLLAGYLPFHDS----NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D W+ G +L+ ++AG PF E+ R + + + F P+ R L ++L
Sbjct: 367 -DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 253 PNPSTRI-----SMAKIRESSWFRK 272
+P+ R+ S +++E F+K
Sbjct: 426 KDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V Y + R VA+K+I + + D+ E VM + H +VQLY
Sbjct: 32 LGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NAVDFCHSRGV 134
V + IF + EY G L N L+E R QQL+ A+++ S+
Sbjct: 87 VCTKQRPIFIITEYMANGCLLN-----YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKG 191
HRD+ K+SDFGLS D ++ G+ + PEV+
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEETSSVGSKFPVRWSPPEVLMYSK 197
Query: 192 YDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ K DIW+ GV+++ + + G +P+
Sbjct: 198 FSS-KSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 16/265 (6%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
R+LG+G F +V + T + A K ++K +I + E ++ V +V L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 80 YEVMATKSKIFFVMEYAKGGEL---FNKVAKGKLKEDAARRYFQQLINAVDFCHSRGVYH 136
TK + V+ GG+L + + E A Y ++ ++ H + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 137 RDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEK 196
RD+KP +ISD GL+ + + GT Y+APEV+ + Y
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 197 VDIWSCGVVLFVLLAGYLPFHDS----NLIEMYRKIGKAEFKCPNWFPPEVRKLLCKILD 252
D W+ G +L+ ++AG PF E+ R + + + F P+ R L ++L
Sbjct: 367 -DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 253 PNPSTRI-----SMAKIRESSWFRK 272
+P+ R+ S +++E F+K
Sbjct: 426 KDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 26/274 (9%)
Query: 10 SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM- 68
SV Y + + +G G +KV+ + Q A+K ++ ++ L D + EI+ +
Sbjct: 24 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTL-DSYRNEIAYLN 81
Query: 69 RIVRHPN-IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--YFQQLINA 125
++ +H + I++LY+ T I+ VME G N K K D R Y++ ++ A
Sbjct: 82 KLQQHSDKIIRLYDYEITDQYIYMVMEC--GNIDLNSWLKKKKSIDPWERKSYWKNMLEA 139
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE 185
V H G+ H D+KP K+ DFG++ Q + + GT Y+ PE
Sbjct: 140 VHTIHQHGIVHSDLKP-ANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
Query: 186 VINRKGYDGEK----------VDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG-----K 230
I E D+WS G +L+ + G PF +I K+
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPN 256
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
E + P+ +++ +L L +P RIS+ ++
Sbjct: 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQ-----SVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+ R+LG+G F +VY + TN +VAVK KD + ++ E +M+ +
Sbjct: 28 LNRILGEGFFGEVY--EGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNLD 83
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLINAVDFCH 130
HP+IV+L ++ + + +ME GEL + + + K LK Y Q+ A+ +
Sbjct: 84 HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINR 189
S HRDI K+ DFGLS + +D + P +++PE IN
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE--DEDYYKASVTRLPIKWMSPESINF 200
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF---HDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
+ + D+W V ++ +L+ G PF + ++I + K + P+ PP +
Sbjct: 201 RRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR--LPKPDLCPPVLYT 257
Query: 246 LLCKILDPNPSTR 258
L+ + D +PS R
Sbjct: 258 LMTRCWDYDPSDR 270
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQ-----SVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+ R+LG+G F +VY + TN +VAVK KD + ++ E +M+ +
Sbjct: 12 LNRILGEGFFGEVY--EGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNLD 67
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLINAVDFCH 130
HP+IV+L ++ + + +ME GEL + + + K LK Y Q+ A+ +
Sbjct: 68 HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINR 189
S HRDI K+ DFGLS + +D + P +++PE IN
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE--DEDYYKASVTRLPIKWMSPESINF 184
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF---HDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
+ + D+W V ++ +L+ G PF + ++I + K + P+ PP +
Sbjct: 185 RRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR--LPKPDLCPPVLYT 241
Query: 246 LLCKILDPNPSTR 258
L+ + D +PS R
Sbjct: 242 LMTRCWDYDPSDR 254
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQ-----SVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+ R+LG+G F +VY + TN +VAVK KD + ++ E +M+ +
Sbjct: 16 LNRILGEGFFGEVY--EGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNLD 71
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAARRYFQQLINAVDFCH 130
HP+IV+L ++ + + +ME GEL + + + K LK Y Q+ A+ +
Sbjct: 72 HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
S HRDI K+ DFGLS + +D + P +++PE IN
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE--DEDYYKASVTRLPIKWMSPESINF 188
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF---HDSNLIEMYRKIGKAEFKCPNWFPPEVRK 245
+ + D+W V ++ +L+ G PF + ++I + K + P+ PP +
Sbjct: 189 RRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR--LPKPDLCPPVLYT 245
Query: 246 LLCKILDPNPSTR 258
L+ + D +PS R
Sbjct: 246 LMTRCWDYDPSDR 258
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 13/255 (5%)
Query: 22 LGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG G+F V + A S +T SVAVK + D + + D RE++ M + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHSRGVY 135
+LY V+ T + V E A G L +++ K G RY Q+ + + S+
Sbjct: 75 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 136 HRDIKPXXXXXXXXXXXKISDFGL-SALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+ KI DFGL AL Q + A+ APE + + +
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF-S 192
Query: 195 EKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKIL 251
D W GV L+ + G P+ N ++ KI K + P P ++ ++ +
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 252 DPNPSTRISMAKIRE 266
P R + +R+
Sbjct: 253 AHKPEDRPTFVALRD 267
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G V+ + +A K+I + ++ + +QI RE+ V+ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR-GVYHRDI 139
+ +I ME+ GG L + K G++ E + +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
KP K+ DFG+S + D + ++ GT +Y++PE + Y + DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS-DI 186
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
WS G+ L + G P + E+ G
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 22 LGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG G+F V + A S +T SVAVK + D + + D RE++ M + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHSRGVY 135
+LY V+ T + V E A G L +++ K G RY Q+ + + S+
Sbjct: 79 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDG 194
HRD+ KI DFGL ++ P A+ APE + + +
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-S 196
Query: 195 EKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKIL 251
D W GV L+ + G P+ N ++ KI K + P P ++ ++ +
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 252 DPNPSTRISMAKIRE 266
P R + +R+
Sbjct: 257 AHKPEDRPTFVALRD 271
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G V+ + +A K+I + ++ + +QI RE+ V+ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR-GVYHRDI 139
+ +I ME+ GG L + K G++ E + +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
KP K+ DFG+S + D + ++ GT +Y++PE + Y + DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS-DI 186
Query: 200 WSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
WS G+ L + G P + E+ G
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVI----DKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F+ V + A+K I +D+ ++ +RE + R+ HPNI+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR-------EEAQREADMHRLFNHPNIL 89
Query: 78 QLYEVM----ATKSKIFFVMEYAKGGELFNKVAKGK-----LKEDAARRYFQQLINAVDF 128
+L K + + ++ + K G L+N++ + K L ED + ++
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 129 CHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTC--------GTPA 180
H++G HRD+KP + D G S C H +G T +
Sbjct: 150 IHAKGYAHRDLKPTNILLGDEGQPVLMDLG-SMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 181 YVAPEVINRKGYD--GEKVDIWSCGVVLFVLLAGYLPF 216
Y APE+ + + + E+ D+WS G VL+ ++ G P+
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G V+ + +A K+I + ++ + +QI RE+ V+ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR-GVYHRDI 139
+ +I ME+ GG L + K G++ E + +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
KP K+ DFG+S + D + ++ GT +Y++PE + Y + DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS-DI 186
Query: 200 WSCGVVLFVLLAGYLPF 216
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G V+ + +A K+I + ++ + +QI RE+ V+ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAK-GKLKEDAARRYFQQLINAVDFCHSR-GVYHRDI 139
+ +I ME+ GG L + K G++ E + +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDI 199
KP K+ DFG+S + D + ++ GT +Y++PE + Y + DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYSVQS-DI 186
Query: 200 WSCGVVLFVLLAGYLPF 216
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 13/255 (5%)
Query: 22 LGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG G+F V + A S +T SVAVK + D + + D RE++ M + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHSRGVY 135
+LY V+ T + V E A G L +++ K G RY Q+ + + S+
Sbjct: 85 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 136 HRDIKPXXXXXXXXXXXKISDFGL-SALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+ KI DFGL AL Q + A+ APE + + +
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-S 202
Query: 195 EKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKIL 251
D W GV L+ + G P+ N ++ KI K + P P ++ ++ +
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 252 DPNPSTRISMAKIRE 266
P R + +R+
Sbjct: 263 AHKPEDRPTFVALRD 277
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
T ++ L+G G F KVY +R VA+K + + + +S R
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLS---FCR 93
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQL------INAV 126
HP++V L ++++ + +Y + G L + L + + Q+L +
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT-MSMSWEQRLEICIGAARGL 152
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEV 186
+ H+R + HRD+K KI+DFG+S Q L GT Y+ PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEY 212
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
KG EK D++S GVVLF +L S EM + AE+ + ++
Sbjct: 213 F-IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM---VNLAEWAVESHNNGQLE-- 266
Query: 247 LCKILDPNPSTRISMAKIRE 266
+I+DPN + +I +R+
Sbjct: 267 --QIVDPNLADKIRPESLRK 284
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V Y + R VA+K+I + + D+ E VM + H +VQLY
Sbjct: 17 LGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYG 71
Query: 82 VMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NAVDFCHSRGV 134
V + IF + EY G L N L+E R QQL+ A+++ S+
Sbjct: 72 VCTKQRPIFIITEYMANGCLLN-----YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 135 YHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKG 191
HRD+ K+SDFGLS D ++ G+ + PEV+
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSRGSKFPVRWSPPEVLMYSK 182
Query: 192 YDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ K DIW+ GV+++ + + G +P+
Sbjct: 183 FSS-KSDIWAFGVLMWEIYSLGKMPY 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 22 LGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG G+F V + A S +T SVAVK + D + + D RE++ M + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHSRGVY 135
+LY V+ T + V E A G L +++ K G RY Q+ + + S+
Sbjct: 79 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDG 194
HRD+ KI DFGL ++ P A+ APE + + +
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-S 196
Query: 195 EKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKIL 251
D W GV L+ + G P+ N ++ KI K + P P ++ ++ +
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 252 DPNPSTRISMAKIRE 266
P R + +R+
Sbjct: 257 AHKPEDRPTFVALRD 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 13/255 (5%)
Query: 22 LGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG G+F V + A S +T SVAVK + D + + D RE++ M + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHSRGVY 135
+LY V+ T + V E A G L +++ K G RY Q+ + + S+
Sbjct: 75 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 136 HRDIKPXXXXXXXXXXXKISDFGL-SALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+ KI DFGL AL Q + A+ APE + + +
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-S 192
Query: 195 EKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKIL 251
D W GV L+ + G P+ N ++ KI K + P P ++ ++ +
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 252 DPNPSTRISMAKIRE 266
P R + +R+
Sbjct: 253 AHKPEDRPTFVALRD 267
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 13/255 (5%)
Query: 22 LGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG G+F V + A S +T SVAVK + D + + D RE++ M + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 78 QLYEVMATKSKIFFVMEYAKGGELFNKVAK--GKLKEDAARRYFQQLINAVDFCHSRGVY 135
+LY V+ T + V E A G L +++ K G RY Q+ + + S+
Sbjct: 75 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 136 HRDIKPXXXXXXXXXXXKISDFGL-SALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDG 194
HRD+ KI DFGL AL Q + A+ APE + + +
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-S 192
Query: 195 EKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNW--FPPEVRKLLCKIL 251
D W GV L+ + G P+ N ++ KI K + P P ++ ++ +
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 252 DPNPSTRISMAKIRE 266
P R + +R+
Sbjct: 253 AHKPEDRPTFVALRD 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 21/235 (8%)
Query: 17 EVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIV 71
++ R++G G F +V R + + VAV + K ++VG ++ +R E S+M
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAI----KTLKVGYTEKQRRDFLCEASIMGQF 101
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFC 129
HPN+V L V+ + V+E+ + G L F + G+ + + + +
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TPA-YVAPEVI 187
G HRD+ K+SDFGLS + + + + TT G P + APE I
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 188 NRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGK-----AEFKCP 236
+ + D+WS G+V++ V+ G P+ D + ++ + I + A CP
Sbjct: 221 QYRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCP 274
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 19/260 (7%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
T ++ L+G G F KVY +R VA+K + + + +S R
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLS---FCR 93
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQL------INAV 126
HP++V L ++++ + +Y + G L + L + + Q+L +
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT-MSMSWEQRLEICIGAARGL 152
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEV 186
+ H+R + HRD+K KI+DFG+S Q L GT Y+ PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEY 212
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
KG EK D++S GVVLF +L S EM + AE+ + ++
Sbjct: 213 F-IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM---VNLAEWAVESHNNGQLE-- 266
Query: 247 LCKILDPNPSTRISMAKIRE 266
+I+DPN + +I +R+
Sbjct: 267 --QIVDPNLADKIRPESLRK 284
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D +TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISV-----MRIVRHPNI 76
LG+GA+ V R + + Q +AVK I R + Q ++ + + MR V P
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI------RATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 77 VQLYEVMATKSKIFFVMEYAKGG-ELFNK--VAKGK-LKEDAARRYFQQLINAVDFCHSR 132
V Y + + ++ ME + F K + KG+ + ED + ++ A++ HS+
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 133 -GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT-CGTPAYVAPEVI--- 187
V HRD+KP K+ DFG+S D + T G Y+APE I
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDAGCKPYMAPERINPE 228
Query: 188 -NRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
N+KGY K DIWS G+ + L P+
Sbjct: 229 LNQKGY-SVKSDIWSLGITMIELAILRFPY 257
>pdb|2EHB|D Chain D, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 143
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 318 LNAFDIISLSAGFDLSGFFD--ENPLIREARFTSKRPASVIISKLEEIAKSXXXXXXXXX 375
+NAF++I+LS G +LS FD ++ + R+ RF S+R S II+ +E +A S
Sbjct: 7 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRN 66
Query: 376 XXXXXXXXXXXXXXXIVSMDAEIFQITPNFHLVEMKKSNGDTLEYKKLLKDDIRPALQDI 435
+ ++ EI+++ P+ +V+++K+ G+TLEY K K + L++I
Sbjct: 67 FKTRLEGLSSIKAGQL-AVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYK-KLCSKLENI 124
Query: 436 VW 437
+W
Sbjct: 125 IW 126
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEEDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 30/220 (13%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH- 73
+YEV +++G+G F +V A + +Q VA+K++ +K A++I RI+ H
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI-------RILEHL 150
Query: 74 --------PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDA---ARRYFQQL 122
N++ + E ++ I E L+ + K K + + R++ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXX--KISDFGLSALAQCKHQDGLLHTTCGTPA 180
+ +D H + H D+KP K+ DFG S +HQ ++ +
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQR--VYXXIQSRF 264
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGY--LPFHD 218
Y APEVI Y G +D+WS G +L LL GY LP D
Sbjct: 265 YRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 93 MMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 29 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 83
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 84 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + + P + APE IN G K
Sbjct: 143 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINY-GTFTIKS 199
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 259
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 260 EDRPTFDYLR 269
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 30 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 84
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 85 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + + P + APE IN G K
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIE--DNEXTAREGAKFPIKWTAPEAIN-YGTFTIKS 200
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 260
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 261 EDRPTFDYLR 270
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISV-----MRIVRHPNI 76
LG+GA+ V R + + Q +AVK I R + Q ++ + + MR V P
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI------RATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 77 VQLYEVMATKSKIFFVMEYAKGG-ELFNK--VAKGK-LKEDAARRYFQQLINAVDFCHSR 132
V Y + + ++ ME + F K + KG+ + ED + ++ A++ HS+
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 133 -GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---- 187
V HRD+KP K+ DFG+S D G Y+APE I
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV---DDVAKDIDAGCKPYMAPERINPEL 185
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
N+KGY K DIWS G+ + L P+
Sbjct: 186 NQKGY-SVKSDIWSLGITMIELAILRFPY 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 27 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 81
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 82 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + + P + APE IN G K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAIN-YGTFTIKS 197
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 257
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 258 EDRPTFDYLR 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + + P + APE IN G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE--DNEXTAREGAKFPIKWTAPEAIN-YGTFTIKS 191
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 252 EDRPTFDYLR 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + + P + APE IN G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE--DNEXTAREGAKFPIKWTAPEAIN-YGTFTIKS 191
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 256 STRISMAKIRE--SSWFRKGMNQKQKQ 280
R + +R +F Q Q Q
Sbjct: 252 EDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 93 MMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 22 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 76
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 77 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + + P + APE IN G K
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIE--DNEXTAREGAKFPIKWTAPEAIN-YGTFTIKS 192
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 252
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 253 EDRPTFDYLR 262
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 23 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 77
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 78 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + + P + APE IN G K
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIE--DNEXTAREGAKFPIKWTAPEAIN-YGTFTIKS 193
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 253
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 254 EDRPTFDYLR 263
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 31/263 (11%)
Query: 22 LGQGAFAKVYYARSI-----RTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNI 76
LG+ F KVY Q+VA+K + KDK L ++ + E + ++HPN+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDK-AEGPLREEFRHEAMLRARLQHPNV 91
Query: 77 VQLYEVMATKSKIFFVMEYAKGGELF-----------------NKVAKGKLKEDAARRYF 119
V L V+ + + Y G+L ++ K L+
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 120 QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP 179
Q+ +++ S V H+D+ KISD GL LL +
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 211
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVL----LAGYLPFHDSNLIEMYRKIGKAEFKC 235
++APE I + + DIWS GVVL+ + L Y + + +++EM R + C
Sbjct: 212 RWMAPEAIMYGKFSIDS-DIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN--RQVLPC 268
Query: 236 PNWFPPEVRKLLCKILDPNPSTR 258
P+ P V L+ + + PS R
Sbjct: 269 PDDCPAWVYALMIECWNEFPSRR 291
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 31/263 (11%)
Query: 22 LGQGAFAKVYYARSI-----RTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNI 76
LG+ F KVY Q+VA+K + KDK L ++ + E + ++HPN+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDK-AEGPLREEFRHEAMLRARLQHPNV 74
Query: 77 VQLYEVMATKSKIFFVMEYAKGGELF-----------------NKVAKGKLKEDAARRYF 119
V L V+ + + Y G+L ++ K L+
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 120 QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP 179
Q+ +++ S V H+D+ KISD GL LL +
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVL----LAGYLPFHDSNLIEMYRKIGKAEFKC 235
++APE I + + DIWS GVVL+ + L Y + + +++EM R + C
Sbjct: 195 RWMAPEAIMYGKFSIDS-DIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN--RQVLPC 251
Query: 236 PNWFPPEVRKLLCKILDPNPSTR 258
P+ P V L+ + + PS R
Sbjct: 252 PDDCPAWVYALMIECWNEFPSRR 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 19/252 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 31 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 85
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 86 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ KI+DFGL+ L +D G + APE IN G
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLI----EDNEYTAREGAKFPIKWTAPEAINY-GTFTI 199
Query: 196 KVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 259
Query: 254 NPSTRISMAKIR 265
P R + +R
Sbjct: 260 RPEDRPTFDYLR 271
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 29/265 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ + LG G F +V+ A + + VAVK + K M V + E +VM+ ++H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMA-TYNKHTKVAVKTM-KPGSMSV---EAFLAEANVMKTLQH 242
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--------YFQQLINA 125
+V+L+ V+ TK I+ + E+ G L + LK D + + Q+
Sbjct: 243 DKLVKLHAVV-TKEPIYIITEFMAKGSLLDF-----LKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYV 182
+ F R HRD++ KI+DFGL+ + +D G +
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI----EDNEYTAREGAKFPIKWT 352
Query: 183 APEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFP 240
APE IN + K D+WS G++L ++ G +P+ + E+ R + + P P
Sbjct: 353 APEAINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP 411
Query: 241 PEVRKLLCKILDPNPSTRISMAKIR 265
E+ ++ + P R + I+
Sbjct: 412 EELYNIMMRCWKNRPEERPTFEYIQ 436
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 25/263 (9%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ + LG G F +V+ A + + VAVK + K M V + E +VM+ ++H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMA-TYNKHTKVAVKTM-KPGSMSV---EAFLAEANVMKTLQH 69
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--------YFQQLINA 125
+V+L+ V+ TK I+ + E+ G L + LK D + + Q+
Sbjct: 70 DKLVKLHAVV-TKEPIYIITEFMAKGSLLDF-----LKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAP 184
+ F R HRD++ KI+DFGL+ + + + P + AP
Sbjct: 124 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE--DNEYTAREGAKFPIKWTAP 181
Query: 185 EVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPE 242
E IN + K D+WS G++L ++ G +P+ + E+ R + + P P E
Sbjct: 182 EAINFGSFTI-KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE 240
Query: 243 VRKLLCKILDPNPSTRISMAKIR 265
+ ++ + P R + I+
Sbjct: 241 LYNIMMRCWKNRPEERPTFEYIQ 263
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 21 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + P + APE IN G K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTA--REGAKFPIKWTAPEAIN-YGTFTIKS 191
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 252 EDRPTFDYLR 261
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 27 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 81
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 82 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + P + APE IN G K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTA--REGAKFPIKWTAPEAIN-YGTFTIKS 197
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 257
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 258 EDRPTFDYLR 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 26 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 81 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + P + APE IN G K
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTA--REGAKFPIKWTAPEAIN-YGTFTIKS 196
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 256
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 257 EDRPTFDYLR 266
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ +I+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 15/243 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V+EY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ K++DFGL+ L + + P + APE G K
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE--DNEXTARQGAKFPIKWTAPEAA-LYGRFTIKS 196
Query: 198 DIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L L G +P+ E+ ++ + CP P + L+C+ +P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 256 STR 258
R
Sbjct: 257 EER 259
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ VMEY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 194
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 254 NPSTR 258
+P R
Sbjct: 255 DPEER 259
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 16 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 70
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 71 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + P + APE IN G K
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTA--REGAKFPIKWTAPEAIN-YGTFTIKS 186
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 246
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 247 EDRPTFDYLR 256
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+G F +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 79
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 80 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 139
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 140 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA--RDINNI 197
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 256
Query: 226 R 226
+
Sbjct: 257 K 257
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+G F +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 138
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 139 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 256
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 315
Query: 226 R 226
+
Sbjct: 316 K 316
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V+EY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 194
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 254 NPSTR 258
+P R
Sbjct: 255 DPEER 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+G F +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 84
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 85 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 144
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 145 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 202
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 261
Query: 226 R 226
+
Sbjct: 262 K 262
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 37/280 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ + LG G F +V+ A + + VAVK + K M V + E +VM+ ++H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMA-TYNKHTKVAVKTM-KPGSMSV---EAFLAEANVMKTLQH 236
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR--------YFQQLINA 125
+V+L+ V+ TK I+ + E+ G L + LK D + + Q+
Sbjct: 237 DKLVKLHAVV-TKEPIYIITEFMAKGSLLDF-----LKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAP 184
+ F R HRD++ KI+DFGL+ + P + AP
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVG------------AKFPIKWTAP 338
Query: 185 EVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPE 242
E IN + K D+WS G++L ++ G +P+ + E+ R + + P P E
Sbjct: 339 EAINFGSFTI-KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE 397
Query: 243 VRKLLCKILDPNPSTRISMAKIRE--SSWFRKGMNQKQKQ 280
+ ++ + P R + I+ ++ +Q Q+Q
Sbjct: 398 LYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQ 437
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 194
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 254 NPSTR 258
+P R
Sbjct: 255 DPEER 259
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+G F +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 81
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++EYA G L N+V +
Sbjct: 82 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 141
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 142 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 199
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
Query: 226 R 226
+
Sbjct: 259 K 259
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 33/237 (13%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 89
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL---------------FNKV--AKGKLKE 112
+ +H NI+ L ++ ++EYA G L FN + +L
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 113 DAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLL 172
Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDXXK 207
Query: 173 HTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 15/243 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ K++DFGL+ L + + P + APE G K
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIE--DNEWTARQGAKFPIKWTAPEAA-LYGRFTIKS 193
Query: 198 DIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L L G +P+ E+ ++ + CP P + L+C+ P
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 253
Query: 256 STR 258
R
Sbjct: 254 EER 256
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 15/213 (7%)
Query: 9 PSVLTEKY-EVGRLLGQGAFAKV----YYARSIRTNQSVAVKVI--DKDKIMRVGLADQI 61
P+V ++Y + R LG+G F KV Y + T + VAVK + D R G
Sbjct: 25 PTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW---- 80
Query: 62 KREISVMRIVRHPNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF 119
K+EI ++R + H +I++ A + + VMEY G L + + + + +
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFA 140
Query: 120 QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP 179
QQ+ + + H++ HRD+ KI DFGL+ H+ + +P
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 180 AY-VAPEVINRKGYDGEKVDIWSCGVVLFVLLA 211
+ APE + + D+WS GV L+ LL
Sbjct: 201 VFWYAPECLKEYKFY-YASDVWSFGVTLYELLT 232
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 194
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 254 NPSTR 258
+P R
Sbjct: 255 DPEER 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMS----PEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V++ + I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 248 VVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL L +D G + APE G
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 361
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 362 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 421
Query: 254 NPSTR 258
+P R
Sbjct: 422 DPEER 426
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V++ + I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 247 VVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 360
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 420
Query: 254 NPSTR 258
P R
Sbjct: 421 EPEER 425
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 330 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 389 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 443
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 503
Query: 254 NPSTR 258
P R
Sbjct: 504 EPEER 508
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V++ + I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 247 VVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 360
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 420
Query: 254 NPSTR 258
P R
Sbjct: 421 EPEER 425
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 194
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 254 NPSTR 258
+P R
Sbjct: 255 DPEER 259
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 15/251 (5%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
E ++ + LG G F +V+ + N VA+K + + + E +M+ ++H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMS----PESFLEEAQIMKKLKH 63
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK---LKEDAARRYFQQLINAVDFCH 130
+VQLY V+ ++ I+ V EY G L + + G+ LK Q+ + +
Sbjct: 64 DKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINR 189
HRD++ KI+DFGL+ L + + P + APE
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLARLIE--DNEXTARQGAKFPIKWTAPEAA-L 179
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLL 247
G K D+WS G++L L+ G +P+ N E+ ++ + CP P + +L+
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELM 239
Query: 248 CKILDPNPSTR 258
+P R
Sbjct: 240 IHCWKKDPEER 250
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 110/270 (40%), Gaps = 30/270 (11%)
Query: 20 RLLGQGAFAKVYYARSIRTNQS-----VAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
R LG+GAF KV+ A + + VAVK + KD + +RE ++ ++H
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL-KDPTL--AARKDFQREAELLTNLQHE 77
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKV------------------AKGKLKEDAAR 116
+IV+ Y V + V EY K G+L NK AKG+L
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 117 RYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTC 176
Q+ + + + S+ HRD+ KI DFG+S + T
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 177 GTPAYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FK 234
++ PE I + + E D+WS GV+L+ + G P+ + E+ I + +
Sbjct: 197 LPIRWMPPESIMYRKFTTES-DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLE 255
Query: 235 CPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
P P EV ++ P R+++ +I
Sbjct: 256 RPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++ YA G L N+V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 15/237 (6%)
Query: 3 GMDHNKPSVLTEKY-EVGRLLGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGL 57
G + P+ E++ + + LG+G F V R T + VAVK + L
Sbjct: 1 GSEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHL 58
Query: 58 ADQIKREISVMRIVRHPNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAA 115
D +REI +++ ++H NIV+ V A + + +MEY G L + + K K + D
Sbjct: 59 RD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 117
Query: 116 R--RYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLL 172
+ +Y Q+ +++ ++ HRD+ KI DFGL+ L Q K +
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 173 HTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
+ APE + + D+WS GVVL+ L Y+ S E R IG
Sbjct: 178 EPGESPIFWYAPESLTESKFSVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 232
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 72 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 131 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 185
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 186 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 245
Query: 254 NPSTR 258
+P R
Sbjct: 246 DPEER 250
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 70 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 129 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 183
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 184 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 243
Query: 254 NPSTR 258
+P R
Sbjct: 244 DPEER 248
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 15 KYEVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMR 69
+ + +++G G +V Y R + + V V + K ++ G ++ +R E S+M
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI----KALKAGYTERQRRDFLSEASIMG 105
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVD 127
HPNI++L V+ V EY + G L F + G+ + + +
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--YVAPE 185
+ G HRD+ K+SDFGLS + + D TT G + APE
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAXTTTGGKIPIRWTAPE 224
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHD-------SNLIEMYRKIGKAEFKCPN 237
I + + D+WS GVV++ +LA G P+ + S++ E YR A CP+
Sbjct: 225 AIAFRTFSSAS-DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL--PAPMGCPH 281
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 74 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 133 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 187
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 188 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 247
Query: 254 NPSTR 258
P R
Sbjct: 248 EPEER 252
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 191
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 251
Query: 254 NPSTR 258
P R
Sbjct: 252 EPEER 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
PS LT E+G G F V+ + ++ VA+K I + + D E VM
Sbjct: 26 PSELTFVQEIG----SGQFGLVHLGYWLNKDK-VAIKTIKEGSMSE----DDFIEEAEVM 76
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAV 126
+ HP +VQLY V ++ I V E+ + G L + + +G + + +
Sbjct: 77 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 136
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVA 183
+ V HRD+ K+SDFG++ D ++ GT + +
Sbjct: 137 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWAS 192
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKI 228
PEV + Y K D+WS GV+++ V G +P+ + + E+ I
Sbjct: 193 PEVFSFSRYSS-KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 143
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ F S+ HRD+ K++DFGL+ K D +H G
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVK 202
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 203 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 260
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 21/269 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 21 LGAGQAGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 139 IKPXXXXXXXXXXXKISDFGLSAL---AQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGE 195
++ KI+DFGL+ L A+ ++G + APE IN G
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI----KWTAPEAIN-YGTFTI 189
Query: 196 KVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249
Query: 254 NPSTRISMAKIRE--SSWFRKGMNQKQKQ 280
P R + +R +F Q Q Q
Sbjct: 250 RPEDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 15 KYEVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMR 69
+ + +++G G +V Y R + + V V + K ++ G ++ +R E S+M
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAI----KALKAGYTERQRRDFLSEASIMG 105
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVD 127
HPNI++L V+ V EY + G L F + G+ + + +
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 128 FCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--YVAPE 185
+ G HRD+ K+SDFGLS + + D TT G + APE
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAYTTTGGKIPIRWTAPE 224
Query: 186 VINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHD-------SNLIEMYRKIGKAEFKCPN 237
I + + D+WS GVV++ +LA G P+ + S++ E YR A CP+
Sbjct: 225 AIAFRTFSSAS-DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL--PAPMGCPH 281
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 13/234 (5%)
Query: 22 LGQGAFAKVYYA--RSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
LG G F V R + VA+KV+ + +++ RE +M + +P IV+L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE---DAARRYFQQLINAVDFCHSRGVYH 136
V ++ + VME A GG L +K GK +E Q+ + + + H
Sbjct: 76 IGVCQAEA-LMLVMEMAGGGPL-HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 137 RDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGE 195
RD+ KISDFGLS + P + APE IN + +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS- 192
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKLL 247
+ D+WS GV ++ L+ G P+ E+ I + + +CP PPE+ L+
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALM 246
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 143
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ F S+ HRD+ K++DFGL+ K D +H G
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVK 202
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 203 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 260
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 28 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 85
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 144
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ F S+ HRD+ K++DFGL+ K D +H G
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVK 203
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 204 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 261
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 262 YCPDPLYEVMLKCWHPKAEMRPSFSEL 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 74
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 195 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 229
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQ-------SVAVKVIDKDKIMRVGLADQIKREIS 66
+K +G+ LG+GAF +V A ++ ++ +VAVK++ KD L+D + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVS-EME 92
Query: 67 VMRIV-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-----------------FNKVAKG 108
+M+++ +H NI+ L ++ ++ YA G L N+V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 109 KLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
++ QL +++ S+ HRD+ KI+DFGL+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNI 210
Query: 169 DGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMY 225
D TT G P ++APE + + Y + D+WS GV+++ + G P+ + E++
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 226 R 226
+
Sbjct: 270 K 270
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 105
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 226 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V++ + I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 247 VVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 360
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 420
Query: 254 NPSTR 258
P R
Sbjct: 421 EPEER 425
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 80
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 201 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 235
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 81
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 202 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 25 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 82
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 141
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ F S+ HRD+ K++DFGL+ K D +H G
Sbjct: 142 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVK 200
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 201 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 258
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 259 YCPDPLYEVMLKCWHPKAEMRPSFSEL 285
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 86 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 143
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 202
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ F S+ HRD+ K++DFGL+ K D +H G
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVK 261
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 262 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 319
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 320 YCPDPLYEVMLKCWHPKAEMRPSFSEL 346
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 32 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 89
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 148
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ F S+ HRD+ K++DFGL+ K D +H G
Sbjct: 149 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVK 207
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 208 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 265
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 266 YCPDPLYEVMLKCWHPKAEMRPSFSEL 292
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 78
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 199 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 233
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 28 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 85
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 144
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ F S+ HRD+ K++DFGL+ K D +H G
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS-VHNKTGAKLPVK 203
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 204 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 261
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 262 YCPDPLYEVMLKCWHPKAEMRPSFSEL 288
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 72
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 193 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 227
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 79
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 200 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 234
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 74
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 195 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 229
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 15/250 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F +V+ + VAVK + + + D E ++M+ ++H +V+LY
Sbjct: 17 LGAGQFGEVWMG-YYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYA 71
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKG-KLKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ T+ I+ + EY + G L F K G KL + Q+ + F R HR+
Sbjct: 72 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ KI+DFGL+ L + P + APE IN G K
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTA--REGAKFPIKWTAPEAIN-YGTFTIKS 187
Query: 198 DIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L ++ G +P+ E+ + + + P+ P E+ +L+ P
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 247
Query: 256 STRISMAKIR 265
R + +R
Sbjct: 248 EDRPTFDYLR 257
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
+ K++DFGL+ L +D G + APE G
Sbjct: 140 LAAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 194
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 254 NPSTR 258
+P R
Sbjct: 255 DPEER 259
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 92
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 213 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 247
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 73
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 194 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 228
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
D + + E ++ + LG G F +V YY S + VAVK + K M V
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTK----VAVKTL-KPGTMSV---QAF 55
Query: 62 KREISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK---GKLKEDAARRY 118
E ++M+ ++H +V+LY V+ + I+ + EY G L + + GK+ +
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGT 178
Q+ + + + HRD++ KI+DFGL+ + + +
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE--DNEYTAREGAKF 173
Query: 179 P-AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
P + APE IN G K D+WS G++L+ ++ G +P+
Sbjct: 174 PIKWTAPEAINF-GCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 104/245 (42%), Gaps = 19/245 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I+ V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 81 VV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGE 195
++ K++DFGL+ L +D G + APE G
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEAA-LYGRFTI 194
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDP 253
K D+WS G++L L G +P+ E+ ++ + CP P + L+C+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
Query: 254 NPSTR 258
+P R
Sbjct: 255 DPEER 259
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 92
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 213 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 247
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 165 DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 102
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 163 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 222
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 223 RKFTSAS-DVWSYGIVLWEVMSYGERPY 249
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NA 125
HPNI++L V+ + V EY + G L L++ A+ QL+ +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA---YV 182
+ + G HRD+ K+SDFGLS + + + +TT G +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIPIRWT 188
Query: 183 APEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+PE I + + D+WS G+VL+ V+ G P+
Sbjct: 189 SPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPY 222
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA---YVAPEVI 187
G HRD+ K+SDFGLS + + + +TT G + +PE I
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIPIRWTSPEAI 210
Query: 188 NRKGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 211 AYRKFTSAS-DVWSYGIVLWEVMSYGERPY 239
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ R++G G F +V R + + + V + K ++VG ++ +R E S+M
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 81
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI+ L V+ + V EY + G L F K G+ + + + +
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + APE I
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+V++ V+ G P+
Sbjct: 202 RKFTSAS-DVWSYGIVMWEVVSYGERPY 228
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 15/243 (6%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LGQG F +V+ T + VA+K + + + +E VM+ +RH +VQLY
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 82 VMATKSKIFFVMEYAKGGEL--FNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRD 138
V+ ++ I V EY G L F K GK L+ Q+ + + + HRD
Sbjct: 71 VV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 139 IKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKV 197
++ K++DFGL+ L + + P + APE G K
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIE--DNEXTARQGAKFPIKWTAPEAA-LYGRFTIKS 186
Query: 198 DIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNWFPPEVRKLLCKILDPNP 255
D+WS G++L L G +P+ E+ ++ + CP P + L+C+ P
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 246
Query: 256 STR 258
R
Sbjct: 247 EER 249
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + ++
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLMGG 85
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 140
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 197
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 198 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 14/219 (6%)
Query: 20 RLLGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPN 75
R LG+G F V R T + VAVK + L D +REI +++ ++H N
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDN 75
Query: 76 IVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHS 131
IV+ V A + + +ME+ G L + K K + D + +Y Q+ +++ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRK 190
+ HRD+ KI DFGL+ L Q K + + APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 191 GYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
+ D+WS GVVL+ L Y+ S E R IG
Sbjct: 196 KFSVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 78
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 139 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 194
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 252
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 89
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 150 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 205
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHP 74
+YE G +G+G + VY A+ + +I G++ REI+++R ++HP
Sbjct: 23 EYE-GCKVGRGTYGHVYKAKRKDGKDDKDYAL---KQIEGTGISMSACREIALLRELKHP 78
Query: 75 NIVQLYEVMATKS--KIFFVMEYAKGGEL----FNKVAKG-----KLKEDAARRYFQQLI 123
N++ L +V + + K++ + +YA+ F++ +K +L + Q++
Sbjct: 79 NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXX----XXXXXKISDFGLSALAQCKHQD-GLLHTTCGT 178
+ + + H+ V HRD+KP KI+D G + L + L T
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 198
Query: 179 PAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH 217
Y APE++ + + +DIW+ G + LL FH
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 82
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 143 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 198
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 256
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 130
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 191 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 246
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 81
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 142 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 197
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 255
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 89
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 150 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 205
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 9 PSVLTEKY-EVGRLLGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQ--I 61
P++ E++ + LG+G F V R T VAVK ++ G Q
Sbjct: 1 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDF 55
Query: 62 KREISVMRIVRHPNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR-- 117
+REI +++ + IV+ V + ++ VMEY G L + + + + + DA+R
Sbjct: 56 QREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLL 115
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
Y Q+ +++ SR HRD+ KI+DFGL+ L ++
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175
Query: 178 TPAY-VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG------- 229
+P + APE ++ + + D+WS GVVL+ L Y S E R +G
Sbjct: 176 SPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGCERDVPA 233
Query: 230 ----------KAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
P P EV +L+ P+P R S + +
Sbjct: 234 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
PS LT E+G G F V+ + ++ VA+K I + + + E VM
Sbjct: 6 PSELTFVQEIG----SGQFGLVHLGYWLNKDK-VAIKTIREGAMSE----EDFIEEAEVM 56
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAV 126
+ HP +VQLY V ++ I V E+ + G L + + +G + + +
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 116
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVA 183
+ V HRD+ K+SDFG++ D ++ GT + +
Sbjct: 117 AYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWAS 172
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKI 228
PEV + Y K D+WS GV+++ V G +P+ + + E+ I
Sbjct: 173 PEVFSFSRYSS-KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 74
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 135 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 190
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGG 86
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 141
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 142 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 198
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 199 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 245
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 32/221 (14%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVID-KDKIMRVGLADQIKREISVMRIVRH 73
K+ +GR +G G+F ++Y +I+TN+ VA+K+ + K K Q+ E + RI++
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQG 61
Query: 74 ----PNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFC 129
PN V+ + V + + + +LFN ++ KL Q+IN V+F
Sbjct: 62 GTGIPN-VRWFGVEGDYNVLVMDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFV 119
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXK---ISDFGLSALAQCKHQDGLLH---------TTCG 177
HS+ HRDIKP I DFGL+ K++D H G
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK----KYRDTSTHQHIPYRENKNLTG 175
Query: 178 TPAYVAPEVINRKGYD-GEKVDIWSCGVVLFVLLAGYLPFH 217
T Y + V G + + D+ S G VL L G LP+
Sbjct: 176 TARYAS--VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 15/220 (6%)
Query: 2 FGMDHNKPSVLTEKY-EVGRLLGQGAFAKV----YYARSIRTNQSVAVKVIDKD--KIMR 54
G + P+V ++Y + R LG+G F KV Y + T + VAVK + D R
Sbjct: 1 MGSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR 60
Query: 55 VGLADQIKREISVMRIVRHPNIVQLYEVMATKSK--IFFVMEYAKGGELFNKVAKGKLKE 112
G K+EI ++R + H +I++ + + + VMEY G L + + + +
Sbjct: 61 SGW----KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL 116
Query: 113 DAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLL 172
+ QQ+ + + HS+ HR++ KI DFGL+ H+ +
Sbjct: 117 AQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 173 HTTCGTPAY-VAPEVINRKGYDGEKVDIWSCGVVLFVLLA 211
+P + APE + + D+WS GV L+ LL
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGG 85
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 140
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 197
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 198 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 18 VGRLLGQGAFAKVYYARSIRTNQS-------VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+G+ LG+GAF +V A +I ++ VAVK++ D + L+D I E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLIS-EMEMMKM 89
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGEL-------------------FNKVAKGKL 110
+ +H NI+ L ++ ++EYA G L N +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
K+ + Y Q+ +++ S+ HRD+ KI+DFGL+ H D
Sbjct: 150 KDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDY 205
Query: 171 LLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYR 226
TT G P ++APE + + Y + D+WS GV+L+ + G P+ + E+++
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGG 87
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 142
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 143 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 199
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 200 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 246
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGG 85
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 140
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 197
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 198 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
PS LT E+G G F V+ + ++ VA+K I + + + E VM
Sbjct: 9 PSELTFVQEIG----SGQFGLVHLGYWLNKDK-VAIKTIREGAMSE----EDFIEEAEVM 59
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAV 126
+ HP +VQLY V ++ I V E+ + G L + + +G + + +
Sbjct: 60 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 119
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVA 183
+ V HRD+ K+SDFG++ D ++ GT + +
Sbjct: 120 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWAS 175
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKI 228
PEV + Y K D+WS GV+++ V G +P+ + + E+ I
Sbjct: 176 PEVFSFSRYSS-KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGG 85
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 140
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 197
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 198 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGG 85
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 140
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 197
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 198 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGG 86
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 141
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 142 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 198
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 199 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 245
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
PS LT E+G G F V+ + ++ VA+K I + + + E VM
Sbjct: 6 PSELTFVQEIG----SGQFGLVHLGYWLNKDK-VAIKTIREGAMSE----EDFIEEAEVM 56
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAV 126
+ HP +VQLY V ++ I V E+ + G L + + +G + + +
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 116
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVA 183
+ V HRD+ K+SDFG++ D ++ GT + +
Sbjct: 117 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWAS 172
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKI 228
PEV + Y K D+WS GV+++ V G +P+ + + E+ I
Sbjct: 173 PEVFSFSRYSS-KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGG 85
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 140
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 141 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 197
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 198 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 244
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGL+ + + + P + +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
PS LT E+G G F V+ + ++ VA+K I + + + E VM
Sbjct: 7 PSELTFVQEIG----SGQFGLVHLGYWLNKDK-VAIKTIREGAMSE----EDFIEEAEVM 57
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAV 126
+ HP +VQLY V ++ I V E+ + G L + + +G + + +
Sbjct: 58 MKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 117
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVA 183
+ V HRD+ K+SDFG++ D ++ GT + +
Sbjct: 118 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWAS 173
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKI 228
PEV + Y K D+WS GV+++ V G +P+ + + E+ I
Sbjct: 174 PEVFSFSRYSS-KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 74
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY-VAPEVINRKGY 192
HRD+ KI DFGL+ + + + +P + APE + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 195 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 13/234 (5%)
Query: 22 LGQGAFAKVYYA--RSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
LG G F V R + VA+KV+ + +++ RE +M + +P IV+L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE---DAARRYFQQLINAVDFCHSRGVYH 136
V ++ + VME A GG L +K GK +E Q+ + + + H
Sbjct: 402 IGVCQAEA-LMLVMEMAGGGPL-HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 137 RDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGE 195
R++ KISDFGLS + P + APE IN + +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS- 518
Query: 196 KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKLL 247
+ D+WS GV ++ L+ G P+ E+ I + + +CP PPE+ L+
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALM 572
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ YEV R +G+G +++V+ ++ N+ +K + V + + +
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGG 106
Query: 74 PNIVQLYEVM-----ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDF 128
PNIV+L +++ T S IF EY + KV L + R Y +L+ A+D+
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIF---EYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDY 161
Query: 129 CHSRGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-V 186
CHS+G+ HRD+KP ++ D+G LA+ H + + + PE +
Sbjct: 162 CHSQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELL 218
Query: 187 INRKGYDGEKVDIWSCGVVLFVLLAGYLPF---HDSN--LIEMYRKIG 229
++ + YD +D+WS G + ++ PF HD++ L+++ + +G
Sbjct: 219 VDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
PS LT E+G G F V+ + ++ VA+K I + + + E VM
Sbjct: 4 PSELTFVQEIG----SGQFGLVHLGYWLNKDK-VAIKTIREGAMSE----EDFIEEAEVM 54
Query: 69 RIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAV 126
+ HP +VQLY V ++ I V E+ + G L + + +G + + +
Sbjct: 55 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 114
Query: 127 DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVA 183
+ V HRD+ K+SDFG++ D ++ GT + +
Sbjct: 115 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFPVKWAS 170
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKI 228
PEV + Y K D+WS GV+++ V G +P+ + + E+ I
Sbjct: 171 PEVFSFSRYSS-KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 9 PSVLTEKY-EVGRLLGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQ--I 61
P++ E++ + LG+G F V R T VAVK ++ G Q
Sbjct: 4 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDF 58
Query: 62 KREISVMRIVRHPNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR-- 117
+REI +++ + IV+ V + + VMEY G L + + + + + DA+R
Sbjct: 59 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 118
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
Y Q+ +++ SR HRD+ KI+DFGL+ L ++
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178
Query: 178 TPAY-VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGK------ 230
+P + APE ++ + + D+WS GVVL+ L Y S E R +G
Sbjct: 179 SPIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGSERDVPA 236
Query: 231 -----------AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
P P EV +L+ P+P R S + +
Sbjct: 237 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++ + +LG+G F KVY R + VAVK + +++ G Q + E+ ++ +
Sbjct: 35 VASDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQ--GGELQFQTEVEMISM 91
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGEL---FNKVAKGKLKEDAARRYFQQLINAV- 126
H N+++L T ++ V Y G + + + + D +R L +A
Sbjct: 92 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG 151
Query: 127 -----DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
D C + + HRD+K + DFGL+ L K + GT +
Sbjct: 152 LAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGTIGH 209
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+APE ++ G EK D++ GV+L L+ G F
Sbjct: 210 IAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V EY + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGL + + + P + +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 16/264 (6%)
Query: 3 GMDHNKP-SVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
G D ++P S + ++ LG G++ +V+ RS + AVK + G D+
Sbjct: 45 GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK---RSMSPFRGPKDRA 101
Query: 62 KREISV---MRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG-KLKEDAARR 117
++ V ++ +HP V+L + ++ E + A G L E
Sbjct: 102 RKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWG 161
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
Y + + A+ HS+G+ H D+KP K+ DFGL L + G G
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELG-TAGAGEVQEG 218
Query: 178 TPAYVAPEVINRKGYDGEKVDIWSCGV-VLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCP 236
P Y+APE++ +G G D++S G+ +L V LP ++ + EF
Sbjct: 219 DPRYMAPELL--QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA- 275
Query: 237 NWFPPEVRKLLCKILDPNPSTRIS 260
E+R +L +L+P+P R +
Sbjct: 276 -GLSSELRSVLVMMLEPDPKLRAT 298
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 16/222 (7%)
Query: 16 YEVGRLLGQG--AFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
YE+ ++G+G V AR T + V V+ I+ + + ++ E+ V ++ H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNH 85
Query: 74 PNIVQLYEVMATKSKIFFV---MEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
PNIV ++++ V M Y +L + E A Q ++ A+D+ H
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDF--GLSALAQCKHQDGLLHT----TCGTPAYVAP 184
G HR +K +S LS ++ + Q ++H + +++P
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSP 204
Query: 185 EVI--NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEM 224
EV+ N +GYD K DI+S G+ L G++PF D +M
Sbjct: 205 EVLQQNLQGYDA-KSDIYSVGITACELANGHVPFKDMPATQM 245
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 16 YEVGRLLGQG--AFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
YE+ ++G+G V AR T + V V+ I+ + + ++ E+ V ++ H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNH 69
Query: 74 PNIVQLYEVMATKSKIFFV---MEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH 130
PNIV ++++ V M Y +L + E A Q ++ A+D+ H
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDF--GLSALAQCKHQDGLLHT----TCGTPAYVAP 184
G HR +K +S LS ++ + Q ++H + +++P
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSP 188
Query: 185 EVI--NRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKC 235
EV+ N +GYD K DI+S G+ L G++PF D +M + C
Sbjct: 189 EVLQQNLQGYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 240
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 15/220 (6%)
Query: 2 FGMDHNKPSVLTEKY-EVGRLLGQGAFAKV----YYARSIRTNQSVAVKVIDKD--KIMR 54
G + P+V ++Y + R LG+G F KV Y + T + VAVK + D R
Sbjct: 1 MGSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR 60
Query: 55 VGLADQIKREISVMRIVRHPNIVQLYEVMATKSK--IFFVMEYAKGGELFNKVAKGKLKE 112
G K+EI ++R + H +I++ + + + VMEY G L + + + +
Sbjct: 61 SGW----KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL 116
Query: 113 DAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLL 172
+ QQ+ + + H++ HR++ KI DFGL+ H+ +
Sbjct: 117 AQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 173 HTTCGTPAY-VAPEVINRKGYDGEKVDIWSCGVVLFVLLA 211
+P + APE + + D+WS GV L+ LL
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQLYE 81
LG G F V + + VAVK+I + + D+ +E M + HP +V+ Y
Sbjct: 16 LGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSE----DEFFQEAQTMMKLSHPKLVKFYG 70
Query: 82 VMATKSKIFFVMEYAKGGELFNKV-AKGK-LKEDAARRYFQQLINAVDFCHSRGVYHRDI 139
V + + I+ V EY G L N + + GK L+ + + F S HRD+
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130
Query: 140 KPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---AYVAPEVINRKGYDGEK 196
K+SDFG++ D ++ GT + APEV + Y K
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYV----LDDQYVSSVGTKFPVKWSAPEVFHYFKYSS-K 185
Query: 197 VDIWSCGVVLF-VLLAGYLPF 216
D+W+ G++++ V G +P+
Sbjct: 186 SDVWAFGILMWEVFSLGKMPY 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 17 EVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIV 71
++ +++G G F +V R + + + V + K ++ G D+ +R E S+M
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI----KTLKAGYTDKQRRDFLSEASIMGQF 87
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFC 129
HPNI+ L V+ + + EY + G L F + G+ + + + + +
Sbjct: 88 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVIN 188
HRD+ K+SDFG+S + + + P + APE I
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 189 RKGYDGEKVDIWSCGVVLF-VLLAGYLPFHD 218
+ + D+WS G+V++ V+ G P+ D
Sbjct: 208 YRKFTSAS-DVWSYGIVMWEVMSYGERPYWD 237
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 9 PSVLTEKY-EVGRLLGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQ--I 61
P++ E++ + LG+G F V R T VAVK ++ G Q
Sbjct: 17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDF 71
Query: 62 KREISVMRIVRHPNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR-- 117
+REI +++ + IV+ V + + VMEY G L + + + + + DA+R
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
Y Q+ +++ SR HRD+ KI+DFGL+ L ++
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
Query: 178 TPAY-VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG------- 229
+P + APE ++ + + D+WS GVVL+ L Y S E R +G
Sbjct: 192 SPIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGCERDVPA 249
Query: 230 ----------KAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
P P EV +L+ P+P R S + +
Sbjct: 250 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 13/264 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 13 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 71 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 129
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 130 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 188
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 189 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 248
Query: 253 PNPSTRISMAKIRESSWFRKGMNQ 276
+ ++R +++ +N+
Sbjct: 249 VENRPGFAAVELRLRNYYYDVVNE 272
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 13/264 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 25 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 83 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 141
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 200
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 201 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 260
Query: 253 PNPSTRISMAKIRESSWFRKGMNQ 276
+ ++R +++ +N+
Sbjct: 261 VENRPGFAAVELRLRNYYYDVVNE 284
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 9 PSVLTEKY-EVGRLLGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQ--I 61
P++ E++ + LG+G F V R T VAVK ++ G Q
Sbjct: 5 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDF 59
Query: 62 KREISVMRIVRHPNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR-- 117
+REI +++ + IV+ V + + VMEY G L + + + + + DA+R
Sbjct: 60 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 119
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
Y Q+ +++ SR HRD+ KI+DFGL+ L ++
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
Query: 178 TPAY-VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG------- 229
+P + APE ++ + + D+WS GVVL+ L Y S E R +G
Sbjct: 180 SPIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGCERDVPA 237
Query: 230 ----------KAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
P P EV +L+ P+P R S + +
Sbjct: 238 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 26 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 83
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 142
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---A 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXS-VHNKTGAKLPVK 201
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 202 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 259
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 260 YCPDPLYEVMLKCWHPKAEMRPSFSEL 286
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 77 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS-K 194
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 254
Query: 253 PNPSTRISMAKIRESSWFRKGMN 275
+ ++R +++ +N
Sbjct: 255 VENRPGFAAVELRLRNYYYDVVN 277
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 75
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + K K + D + +Y Q+ +++ ++
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HR++ KI DFGL+ L Q K + + APE + +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 196 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 230
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREIS-----VM 68
++ +G+ LG+GAF +V A + +++ + + K+++ G R + ++
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRALMSELKILI 86
Query: 69 RIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELF-------NKVAKGKLKEDAARRYFQ 120
I H N+V L + ++E+ K G L N+ K ED + +
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 121 ---------QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGL 171
Q+ ++F SR HRD+ KI DFGL A K D +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIXKDPDXV 205
Query: 172 LHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMY-RKI 228
P ++APE I + Y + D+WS GV+L+ + + G P+ + E + R++
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 229 GKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ + P++ PE+ + + PS R + +++ E
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 13/264 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 15 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 73 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 190
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 191 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 250
Query: 253 PNPSTRISMAKIRESSWFRKGMNQ 276
+ ++R +++ +N+
Sbjct: 251 VENRPGFAAVELRLRNYYYDVVNE 274
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V E + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 165 DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 21/267 (7%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV----R 72
+ G+ LG GAF KV A + + AV + + AD+ + +S ++I+ +
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFN---KVAKGKLKEDAAR--------RYFQQ 121
H NIV L + + EY G+L N + A+ L ++ R + Q
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA- 180
+ + F S+ HRD+ KI DFGL A + ++ P
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNARLPVK 219
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKC--PN 237
++APE I Y + D+WS G++L+ + + G P+ + + K+ K ++ P
Sbjct: 220 WMAPESIFDCVYTVQS-DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 278
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + ++ P+ R + +I
Sbjct: 279 FAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 17 EVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIV 71
++ +++G G F +V R + + + V + K ++ G D+ +R E S+M
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI----KTLKAGYTDKQRRDFLSEASIMGQF 72
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFC 129
HPNI+ L V+ + + EY + G L F + G+ + + + + +
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVIN 188
HRD+ K+SDFG+S + + + P + APE I
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 189 RKGYDGEKVDIWSCGVVLF-VLLAGYLPFHD 218
+ + D+WS G+V++ V+ G P+ D
Sbjct: 193 YRKFTSAS-DVWSYGIVMWEVMSYGERPYWD 222
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 377 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 435 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS-SK 552
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 553 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 612
Query: 253 PNPSTRISMAKIRESSWFRKGMN 275
+ ++R +++ +N
Sbjct: 613 VENRPGFAAVELRLRNYYYDVVN 635
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 7 NKPSVLTEKY-EVGRLLGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQI 61
+ P+V ++Y + R LG+G F KV Y + T + VAVK + + G Q+
Sbjct: 1 SDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKE------GCGPQL 54
Query: 62 K----REISVMRIVRHPNIVQLYEVMATKSK--IFFVMEYAKGGELFNKVAKGKLKEDAA 115
+ REI ++R + H +IV+ + + + VMEY G L + + + +
Sbjct: 55 RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL 114
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT 175
+ QQ+ + + H++ HR + KI DFGL+ H+ +
Sbjct: 115 LLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 176 CGTPAY-VAPEVINR-KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+P + APE + K Y D+WS GV L+ LL + DSN
Sbjct: 175 GDSPVFWYAPECLKECKFYYAS--DVWSFGVTLYELLT----YCDSN 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 35 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 93 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 210
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 270
Query: 253 PNPSTRISMAKIRESSWFRKGMN 275
+ ++R +++ +N
Sbjct: 271 VENRPGFAAVELRLRNYYYDVVN 293
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 35 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 93 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 210
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 270
Query: 253 PNPSTRISMAKIRESSWFRKGMN 275
+ ++R +++ +N
Sbjct: 271 VENRPGFAAVELRLRNYYYDVVN 293
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 33 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 91 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 149
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 150 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 208
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 209 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 268
Query: 253 PNPSTRISMAKIRESSWFRKGMN 275
+ ++R +++ +N
Sbjct: 269 VENRPGFAAVELRLRNYYYDVVN 291
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 46/253 (18%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVI-DKDKIMRVGLADQIKREISVM 68
VL+ +YE+ LG+GAF KV + + VAVK++ + D+ + + EI V+
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR-----YCEAARSEIQVL 65
Query: 69 RIVR--HPN----IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG---KLKEDAARRYF 119
+ PN VQ+ E I V E G ++ + + + D R+
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 120 QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXX-------------------KISDFGLS 160
Q+ +V+F HS + H D+KP K+ DFG S
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-S 183
Query: 161 ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGY--LPFHD 218
A +H L+ T Y APEVI G+ + D+WS G +L G+ P HD
Sbjct: 184 ATYDDEHHSTLV----STRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 219 S--NLIEMYRKIG 229
S +L M R +G
Sbjct: 239 SKEHLAMMERILG 251
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 9 PSVLTEKY-EVGRLLGQGAFAKV----YYARSIRTNQSVAVKVIDKDKIMRVGLADQIK- 62
P+V ++Y + R LG+G F KV Y + T + VAVK + + G Q++
Sbjct: 2 PTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKE------GCGPQLRS 55
Query: 63 ---REISVMRIVRHPNIVQLYEVMATKSK--IFFVMEYAKGGELFNKVAKGKLKEDAARR 117
REI ++R + H +IV+ + + + VMEY G L + + + +
Sbjct: 56 GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL 115
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
+ QQ+ + + H++ HR + KI DFGL+ H+ +
Sbjct: 116 FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 178 TPAY-VAPEVINR-KGYDGEKVDIWSCGVVLFVLLAGYLPFHDSN 220
+P + APE + K Y D+WS GV L+ LL + DSN
Sbjct: 176 SPVFWYAPECLKECKFYYAS--DVWSFGVTLYELLT----YCDSN 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 21/267 (7%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV----R 72
+ G+ LG GAF KV A + + AV + + AD+ + +S ++I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFN---KVAKGKLKEDAAR--------RYFQQ 121
H NIV L + + EY G+L N + A+ L ++ R + Q
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 122 LINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA- 180
+ + F S+ HRD+ KI DFGL A + ++ P
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNARLPVK 227
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKC--PN 237
++APE I Y + D+WS G++L+ + + G P+ + + K+ K ++ P
Sbjct: 228 WMAPESIFDCVYTVQS-DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 286
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + ++ P+ R + +I
Sbjct: 287 FAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 378 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 436 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 494
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS-SK 553
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 554 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 613
Query: 253 PNPSTRISMAKIRESSWFRKGMN 275
+ ++R +++ +N
Sbjct: 614 VENRPGFAAVELRLRNYYYDVVN 636
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 17 EVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIV 71
++ +++G G F +V R + + + V + K ++ G D+ +R E S+M
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI----KTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFC 129
HPNI+ L V+ + + EY + G L F + G+ + + + + +
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVIN 188
HRD+ K+SDFG+S + + + P + APE I
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 189 RKGYDGEKVDIWSCGVVLF-VLLAGYLPFHD 218
+ + D+WS G+V++ V+ G P+ D
Sbjct: 187 YRKFTSAS-DVWSYGIVMWEVMSYGERPYWD 216
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 57/245 (23%)
Query: 13 TEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
++KY +G+ LG G+F V I + + A+K + +D + RE+ +M+++
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYK-------NRELDIMKVLD 58
Query: 73 HPNIVQLYEVMAT-----------------------------KSKIF---------FVME 94
H NI++L + T KS I +ME
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 95 YAKGGELFNKVAKGKLKE------DAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXX 148
Y + +KV K ++ + Y QL AV F HS G+ HRDIKP
Sbjct: 119 YVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 149 X-XXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLF 207
K+ DFG + + + + C Y APE++ +D+WS G V
Sbjct: 177 KDNTLKLCDFG--SAKKLIPSEPSVAXICSR-FYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 208 VLLAG 212
L+ G
Sbjct: 234 ELILG 238
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 26/273 (9%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQS---VAVKVIDKDKIMRVGLADQIKREISVMRI 70
+++ +GR+LG+G F V A+ + + S VAVK++ D I + ++ RE + M+
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDI-EEFLREAACMKE 81
Query: 71 VRHPNIVQLYEV-MATKSK-----IFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
HP++ +L V + +++K ++ + K G+L + ++ E+ Q L+
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 125 -------AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
+++ SR HRD+ ++DFGLS + + C
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS---RKIYSGDYYRQGCA 198
Query: 178 TP---AYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRK-IGKAE 232
+ ++A E + Y D+W+ GV ++ ++ G P+ E+Y IG
Sbjct: 199 SKLPVKWLALESLADNLYTVHS-DVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR 257
Query: 233 FKCPNWFPPEVRKLLCKILDPNPSTRISMAKIR 265
K P EV L+ + +P R S +R
Sbjct: 258 LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLR 290
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVR 72
++ ++G G F +V R + + I K ++ G ++ +RE S+M
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFE 73
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + + E+ + G L F ++ G+ + + + + +
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 133
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA---YVAPEVI 187
HRD+ K+SDFGLS + D ++ G + APE I
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
+ + D WS G+V++ +++ G P+ D + ++ I + +++ P PP+
Sbjct: 194 AFRKFTSAS-DAWSYGIVMWEVMSFGERPYWDMSNQDVINAI-EQDYRLPP--PPDCPTS 249
Query: 247 LCKIL 251
L +++
Sbjct: 250 LHQLM 254
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 29/269 (10%)
Query: 20 RLLGQGAFAKVYYARSIRTNQS-----VAVKVI-DKDKIMRVGLADQIKREISVMRIVRH 73
R LG+GAF KV+ A VAVK + D R RE ++ ++H
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR----KDFHREAELLTNLQH 74
Query: 74 PNIVQLYEVMATKSKIFFVMEYAKGGELFNK-----------VAKG----KLKEDAARRY 118
+IV+ Y V + V EY K G+L NK +A+G +L +
Sbjct: 75 EHIVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 119 FQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGT 178
QQ+ + + S+ HRD+ KI DFG+S + T
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 179 PAYVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAE-FKCP 236
++ PE I + + E D+WS GVVL+ + G P++ + E+ I + + P
Sbjct: 194 IRWMPPESIMYRKFTTES-DVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 252
Query: 237 NWFPPEVRKLLCKILDPNPSTRISMAKIR 265
P EV +L+ P R ++ I
Sbjct: 253 RTCPQEVYELMLGCWQREPHMRKNIKGIH 281
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 28/266 (10%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-RIVRHPNIVQL 79
++G+G F +V AR + + + + E+ V+ ++ HPNI+ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE----------DAARRYFQQLIN----- 124
+ ++ +EYA G L + + K ++ E A+ QQL++
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 125 --AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TPA- 180
+D+ + HRD+ KI+DFGLS + Q+ + T G P
Sbjct: 142 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVR 196
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNW 238
++A E +N Y D+WS GV+L+ +++ G P+ E+Y K+ + + P
Sbjct: 197 WMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 255
Query: 239 FPPEVRKLLCKILDPNPSTRISMAKI 264
EV L+ + P R S A+I
Sbjct: 256 CDDEVYDLMRQCWREKPYERPSFAQI 281
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F V YY ++ I K++ L D++ E +VM+ + +P IV+
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAKGK-LKEDAARRYFQQLINAVDFCHSRGVYHR 137
+ + +S + VME A+ G L + + + +K+ Q+ + + HR
Sbjct: 77 MIGICEAESWML-VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 138 DIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEK 196
D+ KISDFGLS + T P + APE IN + K
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS-K 194
Query: 197 VDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAE-FKCPNWFPPEVRKL--LCKILD 252
D+WS GV+++ + G P+ E+ + K E CP P E+ L LC D
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD 254
Query: 253 PNPSTRISMAKIRESSWFRKGMN 275
+ ++R +++ +N
Sbjct: 255 VENRPGFAAVELRLRNYYYDVVN 277
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLI-------NA 125
HPNI++L V+ + V E + G L L++ A+ QL+ +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 126 VDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA---YV 182
+ + G HRD+ K+SDFGLS + + + +TT G +
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIPIRWT 188
Query: 183 APEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+PE I + + D+WS G+VL+ V+ G P+
Sbjct: 189 SPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPY 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 28/266 (10%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-RIVRHPNIVQL 79
++G+G F +V AR + + + + E+ V+ ++ HPNI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE----------DAARRYFQQLIN----- 124
+ ++ +EYA G L + + K ++ E A+ QQL++
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 125 --AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TPA- 180
+D+ + HRD+ KI+DFGLS + Q+ + T G P
Sbjct: 152 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVR 206
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNW 238
++A E +N Y D+WS GV+L+ +++ G P+ E+Y K+ + + P
Sbjct: 207 WMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 265
Query: 239 FPPEVRKLLCKILDPNPSTRISMAKI 264
EV L+ + P R S A+I
Sbjct: 266 CDDEVYDLMRQCWREKPYERPSFAQI 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 45 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 102
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 161
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 162 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 220
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 221 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 278
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 279 YCPDPLYEVMLKCWHPKAEMRPSFSEL 305
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 143
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 202
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 203 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 260
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 18 VGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIVR 72
+ +++G G F +V R + + + ++V + K ++VG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAI----KTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + V E + G L F + + + + + + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-YVAPEVINR 189
G HRD+ K+SDFGLS + + + P + +PE I
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 190 KGYDGEKVDIWSCGVVLF-VLLAGYLPF 216
+ + D+WS G+VL+ V+ G P+
Sbjct: 225 RKFTSAS-DVWSYGIVLWEVMSYGERPY 251
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 37/270 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++YE+ L+G+G+F +V A + VA+K+I K +Q + E+ ++ ++
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNK 109
Query: 74 PNIVQLYEVMATKSKIFF---------VMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
+ Y ++ K F ++ Y L N +G + + R++ QQ+
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCT 168
Query: 125 AVDFCHS--RGVYHRDIKPXXXXXX--XXXXXKISDFGLSA-LAQCKHQDGLLHTTCGTP 179
A+ F + + H D+KP KI DFG S L Q +Q +
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ------XIQSR 222
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWF 239
Y +PEV+ YD +D+WS G +L + G F +N ++ KI +
Sbjct: 223 FYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVL-----GI 276
Query: 240 PPEVRKLLCKILDPNPSTRISMAKIRESSW 269
PP ILD P R K+ + +W
Sbjct: 277 PP------AHILDQAPKARKFFEKLPDGTW 300
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 22 LGQGAFAKV---YYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
LG G F +V YY S + VAVK + K M V E ++M+ ++H +V+
Sbjct: 20 LGAGQFGEVWMGYYNNSTK----VAVKTL-KPGTMSV---QAFLEEANLMKTLQHDKLVR 71
Query: 79 LYEVMATKSKIFFVMEYAKGGELFNKVAK---GKLKEDAARRYFQQLINAVDFCHSRGVY 135
LY V+ + I+ + E+ G L + + GK+ + Q+ + + +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 136 HRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDG 194
HRD++ KI+DFGL+ + + + P + APE IN G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIE--DNEYTAREGAKFPIKWTAPEAINF-GCFT 188
Query: 195 EKVDIWSCGVVLF-VLLAGYLPF 216
K ++WS G++L+ ++ G +P+
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPY 211
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 25 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 82
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 141
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTP---A 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 142 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 200
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 201 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 258
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 259 YCPDPLYEVMLKCWHPKAEMRPSFSEL 285
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 37/270 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++YE+ L+G+G+F +V A + VA+K+I K +Q + E+ ++ ++
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNK 109
Query: 74 PNIVQLYEVMATKSKIFF---------VMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
+ Y ++ K F ++ Y L N +G + + R++ QQ+
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCT 168
Query: 125 AVDFCHS--RGVYHRDIKPXXXXXX--XXXXXKISDFGLSA-LAQCKHQDGLLHTTCGTP 179
A+ F + + H D+KP KI DFG S L Q +Q +
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQ------XIQSR 222
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWF 239
Y +PEV+ YD +D+WS G +L + G F +N ++ KI +
Sbjct: 223 FYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVL-----GI 276
Query: 240 PPEVRKLLCKILDPNPSTRISMAKIRESSW 269
PP ILD P R K+ + +W
Sbjct: 277 PP------AHILDQAPKARKFFEKLPDGTW 300
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 19 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 76
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 135
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 136 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 194
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 195 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 252
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 253 YCPDPLYEVMLKCWHPKAEMRPSFSEL 279
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 37/270 (13%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
++YE+ L+G+G+F +V A + VA+K+I K +Q + E+ ++ ++
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMNK 90
Query: 74 PNIVQLYEVMATKSKIFF---------VMEYAKGGELFNKVAKGKLKEDAARRYFQQLIN 124
+ Y ++ K F ++ Y L N +G + + R++ QQ+
Sbjct: 91 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCT 149
Query: 125 AVDFCHS--RGVYHRDIKPXXXXXX--XXXXXKISDFGLSA-LAQCKHQDGLLHTTCGTP 179
A+ F + + H D+KP KI DFG S L Q +Q +
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ------XIQSR 203
Query: 180 AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGKAEFKCPNWF 239
Y +PEV+ YD +D+WS G +L + G F +N ++ KI +
Sbjct: 204 FYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVL-----GI 257
Query: 240 PPEVRKLLCKILDPNPSTRISMAKIRESSW 269
PP ILD P R K+ + +W
Sbjct: 258 PP------AHILDQAPKARKFFEKLPDGTW 281
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 46 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 103
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 162
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 163 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 221
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 222 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 279
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 280 YCPDPLYEVMLKCWHPKAEMRPSFSEL 306
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 22 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 138
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 139 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 197
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 198 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 255
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 256 YCPDPLYEVMLKCWHPKAEMRPSFSEL 282
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 26/285 (9%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ +G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV-AVKMLKEGATHSEHRA 76
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGEL-------------FNKV 105
+ ++ I H N+V L + ++E+ K G L + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 106 AKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQC 165
K L + Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGL-ARDIY 195
Query: 166 KHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIE 223
K D + P ++APE I + Y + D+WS GV+L+ + + G P+ + E
Sbjct: 196 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 224 MYRKIGK--AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ + K + P++ PE+ + + PS R + +++ E
Sbjct: 255 EFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 26 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 83
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 142
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 201
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 202 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 259
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 260 YCPDPLYEVMLKCWHPKAEMRPSFSEL 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 24 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 81
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 140
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 141 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 199
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 200 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 257
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 258 YCPDPLYEVMLKCWHPKAEMRPSFSEL 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREISV 67
PS L + ++G+G F VY+ + + + + V ++I +G Q E +
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 68 MRIVRHPNIVQLYEV-MATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARR---YFQQLI 123
M+ HPN++ L + + ++ V+ Y K G+L N + + + + + Q+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA 143
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--- 180
+ + S+ HRD+ K++DFGL+ K +H G
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVK 202
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL--IEMYRKIGKAEFKCPN 237
++A E + + + K D+WS GV+L+ L+ G P+ D N I +Y G+ + P
Sbjct: 203 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PE 260
Query: 238 WFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + +++ K P R S +++
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 14/217 (6%)
Query: 22 LGQGAFAKVYYAR----SIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIV 77
LG+G F V R T + VAVK + L D +REI +++ ++H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRD-FEREIEILKSLQHDNIV 77
Query: 78 QLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAAR--RYFQQLINAVDFCHSRG 133
+ V A + + +MEY G L + + + D + +Y Q+ +++ ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 134 VYHRDIKPXXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGY 192
HRD+ KI DFGL+ L Q K + + APE + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 193 DGEKVDIWSCGVVLFVLLAGYLPFHDSNLIEMYRKIG 229
D+WS GVVL+ L Y+ S E R IG
Sbjct: 198 SVAS-DVWSFGVVLYELFT-YIEKSKSPPAEFMRMIG 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVR 72
++ ++G G F +V R + + I K ++ G ++ +RE S+M
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFE 75
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFCH 130
HPNI++L V+ + + E+ + G L F ++ G+ + + + + +
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 135
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA---YVAPEVI 187
HRD+ K+SDFGLS + D ++ G + APE I
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNWFPPEVRKL 246
+ + D WS G+V++ +++ G P+ D + ++ I + +++ P PP+
Sbjct: 196 AFRKFTSAS-DAWSYGIVMWEVMSFGERPYWDMSNQDVINAI-EQDYRLPP--PPDCPTS 251
Query: 247 LCKIL 251
L +++
Sbjct: 252 LHQLM 256
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 15/220 (6%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
V ++ + +LG+G F KVY R + VAVK + +++ G Q + E+ ++ +
Sbjct: 27 VASDNFXNKNILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQ--GGELQFQTEVEMISM 83
Query: 71 VRHPNIVQLYEVMATKSKIFFVMEYAKGGEL---FNKVAKGKLKEDAARRYFQQLINAV- 126
H N+++L T ++ V Y G + + + + D +R L +A
Sbjct: 84 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG 143
Query: 127 -----DFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAY 181
D C + + HRD+K + DFGL+ L K + G +
Sbjct: 144 LAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGXIGH 201
Query: 182 VAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNL 221
+APE ++ G EK D++ GV+L L+ G F + L
Sbjct: 202 IAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 93/243 (38%), Gaps = 44/243 (18%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYARS---IRTNQSVAVKVIDKDKIMRVGLADQIKREISVM 68
L+ +++ +G+G F+ VY A + + + +A+K ++ +I E+ +
Sbjct: 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALK-----HLIPTSHPIRIAAELQCL 73
Query: 69 RIVR-HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVD 127
+ N++ + + M Y + + + +E R Y L A+
Sbjct: 74 TVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE--VREYMLNLFKALK 131
Query: 128 FCHSRGVYHRDIKPXX-XXXXXXXXXKISDFGLSALAQCKH---------------QDGL 171
H G+ HRD+KP + DFGL AQ H Q+
Sbjct: 132 RIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGL---AQGTHDTKIELLKFVQSEAQQERC 188
Query: 172 LHTTC--------------GTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPFH 217
C GTP + APEV+ + +D+WS GV+ LL+G PF+
Sbjct: 189 SQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248
Query: 218 DSN 220
++
Sbjct: 249 KAS 251
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 67
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + ++E+ K G L KVA
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 186
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 245
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 76
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + ++E+ K G L KVA
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 195
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 254
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 76
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + ++E+ K G L KVA
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 195
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 196 RDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 254
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 105/263 (39%), Gaps = 27/263 (10%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV----R 72
+ G+ LG GAF KV A + + AV + + AD+ + +S ++I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFN---------------KVAKGKLKEDAARR 117
H NIV L + + EY G+L N +A L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
+ Q+ + F S+ HRD+ KI DFGL A + ++
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNAR 227
Query: 178 TPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKC 235
P ++APE I Y + D+WS G++L+ + + G P+ + + K+ K ++
Sbjct: 228 LPVKWMAPESIFDCVYTVQS-DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286
Query: 236 --PNWFPPEVRKLL--CKILDPN 254
P + P + ++ C L+P
Sbjct: 287 AQPAFAPKNIYSIMQACWALEPT 309
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 67
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + + E+ K G L KVA
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 186
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 245
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI-----SVMRIVRHPNI 76
+G+GA+ V + Q +AVK I R + ++ ++++ VMR P I
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI------RSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 77 VQLYEVMATKSKIFFVME-----YAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFC-H 130
VQ Y + + + ME + K + V + E+ + + A++
Sbjct: 84 VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143
Query: 131 SRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHT-TCGTPAYVAPEVIN- 188
+ + HRDIKP K+ DFG+S + D + T G Y+APE I+
Sbjct: 144 NLKIIHRDIKPSNILLDRSGNIKLCDFGISG----QLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 189 ---RKGYDGEKVDIWSCGVVLFVLLAGYLPFHDSNLI 222
R+GYD + D+WS G+ L+ L G P+ N +
Sbjct: 200 SASRQGYD-VRSDVWSLGITLYELATGRFPYPKWNSV 235
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 28/266 (10%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVM-RIVRHPNIVQL 79
++G+G F +V AR + + + + E+ V+ ++ HPNI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGKLKE----------DAARRYFQQLIN----- 124
+ ++ +EYA G L + + K ++ E A+ QQL++
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 125 --AVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TPA- 180
+D+ + HR++ KI+DFGLS + Q+ + T G P
Sbjct: 149 ARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVR 203
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKA-EFKCPNW 238
++A E +N Y D+WS GV+L+ +++ G P+ E+Y K+ + + P
Sbjct: 204 WMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 262
Query: 239 FPPEVRKLLCKILDPNPSTRISMAKI 264
EV L+ + P R S A+I
Sbjct: 263 CDDEVYDLMRQCWREKPYERPSFAQI 288
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 26/285 (9%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ +G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV-AVKMLKEGATHSEHRA 76
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGEL-------------FNKV 105
+ ++ I H N+V L + ++E+ K G L + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 106 AKGKLKEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQC 165
K L + Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL-ARDIY 195
Query: 166 KHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIE 223
K D + P ++APE I + Y + D+WS GV+L+ + + G P+ + E
Sbjct: 196 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 224 MY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 299
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 113/277 (40%), Gaps = 47/277 (16%)
Query: 21 LLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-RHPNIVQL 79
+LG GA + Y R + N+ VAVK I + AD RE+ ++R HPN+++
Sbjct: 31 VLGHGAEGTIVY-RGMFDNRDVAVKRILPECF---SFAD---REVQLLRESDEHPNVIRY 83
Query: 80 YEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYF-----------QQLINAVDF 128
+ + + +E + L+E ++ F QQ + +
Sbjct: 84 FCTEKDRQFQYIAIE----------LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH 133
Query: 129 CHSRGVYHRDIKP-----XXXXXXXXXXXKISDFGLS-ALAQCKHQDGLLHTTCGTPAYV 182
HS + HRD+KP ISDFGL LA +H GT ++
Sbjct: 134 LHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 183 APEVINRKGYDGE--KVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKCPNWF 239
APE+++ + VDI+S G V + +++ G PF S + +G C
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC---L 250
Query: 240 PPE------VRKLLCKILDPNPSTRISMAKIRESSWF 270
PE R+L+ K++ +P R S + + +F
Sbjct: 251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 113
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + ++E+ K G L KVA
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 232
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 233 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 291
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 292 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 340
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 76
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + ++E+ K G L KVA
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 195
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 196 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 254
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 17 EVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIV 71
++ +++G G F +V + + + V + K ++ G ++ +R E S+M
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAI----KTLKSGYTEKQRRDFLSEASIMGQF 91
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFC 129
HPN++ L V+ + + + E+ + G L F + G+ + + + +
Sbjct: 92 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 151
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA---YVAPEV 186
HRD+ K+SDFGLS + D + G + APE
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHD 218
I + + D+WS G+V++ V+ G P+ D
Sbjct: 212 IQYRKFTSAS-DVWSYGIVMWEVMSYGERPYWD 243
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 21/263 (7%)
Query: 22 LGQGAFAKVYYA--RSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
LG+GAF KV+ A ++ Q + + K +RE ++ +++H +IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 80 YEVMATKSKIFFVMEYAKGGEL----------------FNKVAKGKLKEDAARRYFQQLI 123
+ V + V EY + G+L VA G L Q+
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
+ + HRD+ KI DFG+S + T ++
Sbjct: 169 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 228
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPP 241
PE I + + E D+WS GVVL+ + G P++ + E I + E + P PP
Sbjct: 229 PESILYRKFTTES-DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP 287
Query: 242 EVRKLLCKILDPNPSTRISMAKI 264
EV ++ P R S+ +
Sbjct: 288 EVYAIMRGCWQREPQQRHSIKDV 310
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 28/287 (9%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTV-AVKMLKEGATHSEHRA 78
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFNKVAKGKLK------E 112
+ ++ I H N+V L + ++E+ K G L + + + E
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 113 DAARRYFQ---------QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALA 163
D + + Q+ ++F SR HRD+ KI DFGL A
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL-ARD 197
Query: 164 QCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNL 221
K D + P ++APE I + Y + D+WS GV+L+ + + G P+ +
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 222 IEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 79
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 136
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 194
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 195 RIYTHQS-DVWSYGVTVWELMTFGSKPY 221
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 104/253 (41%), Gaps = 46/253 (18%)
Query: 11 VLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVI-DKDKIMRVGLADQIKREISVM 68
VL+ +YE+ LG+GAF KV + + VAVK++ + D+ + + EI V+
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR-----YCEAARSEIQVL 65
Query: 69 RIVR--HPN----IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKG---KLKEDAARRYF 119
+ PN VQ+ E I V E G ++ + + + D R+
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 120 QQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXX-------------------KISDFGLS 160
Q+ +V+F HS + H D+KP K+ DFG S
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-S 183
Query: 161 ALAQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGY--LPFHD 218
A +H L+ Y APEVI G+ + D+WS G +L G+ P HD
Sbjct: 184 ATYDDEHHSTLV----XXRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 219 S--NLIEMYRKIG 229
S +L M R +G
Sbjct: 239 SKEHLAMMERILG 251
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 67
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + + E+ K G L KVA
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 186
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 187 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 245
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 21/263 (7%)
Query: 22 LGQGAFAKVYYA--RSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
LG+GAF KV+ A ++ Q + + K +RE ++ +++H +IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 80 YEVMATKSKIFFVMEYAKGGEL----------------FNKVAKGKLKEDAARRYFQQLI 123
+ V + V EY + G+L VA G L Q+
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
+ + HRD+ KI DFG+S + T ++
Sbjct: 140 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 199
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPP 241
PE I + + E D+WS GVVL+ + G P++ + E I + E + P PP
Sbjct: 200 PESILYRKFTTES-DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP 258
Query: 242 EVRKLLCKILDPNPSTRISMAKI 264
EV ++ P R S+ +
Sbjct: 259 EVYAIMRGCWQREPQQRHSIKDV 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 21/263 (7%)
Query: 22 LGQGAFAKVYYA--RSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRHPNIVQL 79
LG+GAF KV+ A ++ Q + + K +RE ++ +++H +IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 80 YEVMATKSKIFFVMEYAKGGEL----------------FNKVAKGKLKEDAARRYFQQLI 123
+ V + V EY + G+L VA G L Q+
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 124 NAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVA 183
+ + HRD+ KI DFG+S + T ++
Sbjct: 146 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 205
Query: 184 PEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKA-EFKCPNWFPP 241
PE I + + E D+WS GVVL+ + G P++ + E I + E + P PP
Sbjct: 206 PESILYRKFTTES-DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP 264
Query: 242 EVRKLLCKILDPNPSTRISMAKI 264
EV ++ P R S+ +
Sbjct: 265 EVYAIMRGCWQREPQQRHSIKDV 287
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 37/230 (16%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQS-----VAVKVIDK--DKIMRVGLADQIKREIS 66
E E G++LG GAF KV A + +++ VAVK++ + D R L ++K
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM--- 101
Query: 67 VMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFN-------KVAKGKLKEDAARR-- 117
+ ++ H NIV L I+ + EY G+L N K ++ +++ + +R
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 118 ---------------YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSAL 162
+ Q+ ++F + HRD+ KI DFGL A
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGL-AR 220
Query: 163 AQCKHQDGLLHTTCGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA 211
+ ++ P ++APE + +G K D+WS G++L+ + +
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESL-FEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 67
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFN------------KVA 106
+ ++ I H N+V L + + E+ K G L KVA
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 107 KGKLKEDAARR-----YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
L +D Y Q+ ++F SR HRD+ KI DFGL A
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 186
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 187 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 245
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 294
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ VAVK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVLIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 24/209 (11%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISV-----MRIVRHPNI 76
LG+GA+ V R + + Q AVK I R + Q ++ + R V P
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI------RATVNSQEQKRLLXDLDISXRTVDCPFT 95
Query: 77 VQLYEVMATKSKIFFVMEYAKGG-ELFNK--VAKGK-LKEDAARRYFQQLINAVDFCHSR 132
V Y + + ++ E + F K + KG+ + ED + ++ A++ HS+
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 133 -GVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPEVI---- 187
V HRD+KP K DFG+S D G Y APE I
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLV---DDVAKDIDAGCKPYXAPERINPEL 212
Query: 188 NRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
N+KGY K DIWS G+ L P+
Sbjct: 213 NQKGY-SVKSDIWSLGITXIELAILRFPY 240
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 27/263 (10%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV----R 72
+ G+ LG GAF KV A + + AV + + AD+ + +S ++I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK--LKEDAA-------------RR 117
H NIV L + + EY G+L N + + L+ D A
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 118 YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG 177
+ Q+ + F S+ HRD+ KI DFGL A + ++
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNAR 227
Query: 178 TPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEFKC 235
P ++APE I Y + D+WS G++L+ + + G P+ + + K+ K ++
Sbjct: 228 LPVKWMAPESIFDCVYTVQS-DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286
Query: 236 --PNWFPPEVRKLL--CKILDPN 254
P + P + ++ C L+P
Sbjct: 287 AQPAFAPKNIYSIMQACWALEPT 309
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 82
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 139
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 197
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 198 RIYTHQS-DVWSYGVTVWELMTFGSKPY 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 79
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 136
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 194
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 195 RIYTHQS-DVWSYGVTVWELMTFGSKPY 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 82 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 196
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 197 RIYTHQS-DVWSYGVTVWELMTFGSKPY 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 5 DHNKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKRE 64
D +K ++ ++G+ LG+GAF +V A + +++ + + K+++ G R
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV-AVKMLKEGATHSEHRA 78
Query: 65 IS-----VMRIVRHPNIVQLYEVMATKS-KIFFVMEYAKGGELFNK--------VAKGKL 110
+ ++ I H N+V L + ++E+ K G L V +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 111 KEDAARRYFQ---------QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSA 161
ED + + Q+ ++F SR HRD+ KI DFGL A
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-A 197
Query: 162 LAQCKHQDGLLHTTCGTP-AYVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDS 219
K D + P ++APE I + Y + D+WS GV+L+ + + G P+
Sbjct: 198 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGV 256
Query: 220 NLIEMY-RKIGKA-EFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRE 266
+ E + R++ + + P++ PE+ + + PS R + +++ E
Sbjct: 257 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 305
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 195
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 196 RIYTHQS-DVWSYGVTVWELMTFGSKPY 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 79 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 193
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 194 RIYTHQS-DVWSYGVTVWELMTFGSKPY 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 18 VGRLLGQGAFAKVYYARSIRTN-----QSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+G+ LG+G F KV A + +VAVK++ K+ L D + E +V++ V
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS-EFNVLKQVN 84
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFN------KVAKGKLKEDAAR---------- 116
HP++++LY + + ++EYAK G L KV G L +R
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 117 ---------RYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH 167
+ Q+ + + + HRD+ KISDFGLS
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS--RDVYE 202
Query: 168 QDGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF--VLLAG 212
+D + + G P ++A E + Y + D+WS GV+L+ V L G
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQS-DVWSFGVLLWEIVTLGG 250
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 128/323 (39%), Gaps = 57/323 (17%)
Query: 7 NKPSVLTEKYEVGRLLGQGAFAKVYYARSIRTN-QSVAVKVIDKDKIMRVGLADQIKREI 65
N ++ +YEV + G +Y A N + V +K + +R+
Sbjct: 73 NPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQF 132
Query: 66 SVMRIVRHPNIVQLYEVMATKSKI-----FFVMEYAKGGELFNKVAKGKLKEDAARRYFQ 120
+ V HP+IVQ++ + + + VMEY GG+ + KL A Y
Sbjct: 133 --LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKRSKGQKLPVAEAIAYLL 189
Query: 121 QLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA 180
+++ A+ + HS G+ + D+KP K+ D G A+++ + G L+ GTP
Sbjct: 190 EILPALSYLHSIGLVYNDLKP-ENIMLTEEQLKLIDLG--AVSRI-NSFGYLY---GTPG 242
Query: 181 YVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGY----------LPFHDSNLIEMYRKIGK 230
+ APE++ R G DI++ G L L LP D +++ Y G
Sbjct: 243 FQAPEIV-RTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP-EDDPVLKTYDSYG- 298
Query: 231 AEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKGMNQKQKQKVTESKDAAS 290
+LL + +DP+P R + A+ + Q ++ +
Sbjct: 299 --------------RLLRRAIDPDPRQRFTTAE------------EMSAQLTGVLREVVA 332
Query: 291 QDAGASAPQGSSSIAAEIKQELG 313
QD G P G S+I + + G
Sbjct: 333 QDTGVPRP-GLSTIFSPSRSTFG 354
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 106/293 (36%), Gaps = 65/293 (22%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYA-RSIRTNQSVAVKVIDKDKIMRVGLADQIKR-EISVMR 69
L E+YE+ LG+G F KV R VA+K+I VG + R EI+V++
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-----VGKYREAARLEINVLK 71
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKED--------AARRYFQQ 121
++ + + + F EL K LKE+ R Q
Sbjct: 72 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 131
Query: 122 LINAVDFCHSRGVYHRDIKPX-------------------XXXXXXXXXXKISDFGLSAL 162
L +A+ F H + H D+KP +++DFG +
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191
Query: 163 AQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF--HDSN 220
H T T Y PEVI G+ + D+WS G +LF G+ F H++
Sbjct: 192 DHEHHT-----TIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHENR 245
Query: 221 LIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
E ++ KIL P PS I + R+ +F KG
Sbjct: 246 ---------------------EHLVMMEKILGPIPSHMIH--RTRKQKYFYKG 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 20/239 (8%)
Query: 9 PSVLTEKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIK----RE 64
PS +T + +++G G F +VY + + S +V K ++ G ++ + E
Sbjct: 43 PSCVTRQ----KVIGAGEFGEVY--KGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE 96
Query: 65 ISVMRIVRHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQL 122
+M H NI++L V++ + + EY + G L F + G+ + +
Sbjct: 97 AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI 156
Query: 123 INAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA-- 180
+ + + HRD+ K+SDFGLS + + + +TT G
Sbjct: 157 AAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE--ATYTTSGGKIPI 214
Query: 181 -YVAPEVINRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHDSNLIEMYRKIGKAEFKCPN 237
+ APE I+ + + D+WS G+V++ V+ G P+ + + E+ + I F+ P
Sbjct: 215 RWTAPEAISYRKFTSAS-DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLPT 271
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 106/293 (36%), Gaps = 65/293 (22%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYA-RSIRTNQSVAVKVIDKDKIMRVGLADQIKR-EISVMR 69
L E+YE+ LG+G F KV R VA+K+I VG + R EI+V++
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-----VGKYREAARLEINVLK 80
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKED--------AARRYFQQ 121
++ + + + F EL K LKE+ R Q
Sbjct: 81 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 140
Query: 122 LINAVDFCHSRGVYHRDIKPX-------------------XXXXXXXXXXKISDFGLSAL 162
L +A+ F H + H D+KP +++DFG +
Sbjct: 141 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 200
Query: 163 AQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF--HDSN 220
H T T Y PEVI G+ + D+WS G +LF G+ F H++
Sbjct: 201 DHEHHT-----TIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHENR 254
Query: 221 LIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
E ++ KIL P PS I + R+ +F KG
Sbjct: 255 ---------------------EHLVMMEKILGPIPSHMIH--RTRKQKYFYKG 284
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 106/293 (36%), Gaps = 65/293 (22%)
Query: 12 LTEKYEVGRLLGQGAFAKVYYA-RSIRTNQSVAVKVIDKDKIMRVGLADQIKR-EISVMR 69
L E+YE+ LG+G F KV R VA+K+I VG + R EI+V++
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-----VGKYREAARLEINVLK 103
Query: 70 IVRHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKED--------AARRYFQQ 121
++ + + + F EL K LKE+ R Q
Sbjct: 104 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 163
Query: 122 LINAVDFCHSRGVYHRDIKPX-------------------XXXXXXXXXXKISDFGLSAL 162
L +A+ F H + H D+KP +++DFG +
Sbjct: 164 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 223
Query: 163 AQCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF--HDSN 220
H T T Y PEVI G+ + D+WS G +LF G+ F H++
Sbjct: 224 DHEHHT-----TIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHENR 277
Query: 221 LIEMYRKIGKAEFKCPNWFPPEVRKLLCKILDPNPSTRISMAKIRESSWFRKG 273
E ++ KIL P PS I + R+ +F KG
Sbjct: 278 ---------------------EHLVMMEKILGPIPSHMIH--RTRKQKYFYKG 307
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 18 VGRLLGQGAFAKVYYARSIRTN-----QSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+G+ LG+G F KV A + +VAVK++ K+ L D + E +V++ V
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS-EFNVLKQVN 84
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFN------KVAKGKLKEDAARR--------- 117
HP++++LY + + ++EYAK G L KV G L +R
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 118 ----------YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH 167
+ Q+ + + + HRD+ KISDFGLS
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS--RDVYE 202
Query: 168 QDGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF--VLLAG 212
+D + + G P ++A E + Y + D+WS GV+L+ V L G
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQS-DVWSFGVLLWEIVTLGG 250
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 18 VGRLLGQGAFAKVYYARSIRTN-----QSVAVKVIDKDKIMRVGLADQIKREISVMRIVR 72
+G+ LG+G F KV A + +VAVK++ K+ L D + E +V++ V
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS-EFNVLKQVN 84
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFN------KVAKGKLKEDAARR--------- 117
HP++++LY + + ++EYAK G L KV G L +R
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 118 ----------YFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKH 167
+ Q+ + + + HRD+ KISDFGLS
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS--RDVYE 202
Query: 168 QDGLLHTTCG-TPA-YVAPEVINRKGYDGEKVDIWSCGVVLF--VLLAG 212
+D + + G P ++A E + Y + D+WS GV+L+ V L G
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQS-DVWSFGVLLWEIVTLGG 250
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKI------------MRVGLADQIK 62
+Y + R LG G F+ V+ A+ + N VA+K++ DK+ RV AD K
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 63 REI----SVMRIVRH-----PN---IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL 110
+ +++++ H PN +V ++EV+ ++ + + +Y G V
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLG-ENLLALIKKYEHRGIPLIYV----- 133
Query: 111 KEDAARRYFQQLINAVDFCHSR-GVYHRDIKPXXXXX------XXXXXXKISDFGLSALA 163
++ +QL+ +D+ H R G+ H DIKP KI+D G +
Sbjct: 134 -----KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 188
Query: 164 QCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ + + T Y +PEV+ + G DIWS ++F L+ G F
Sbjct: 189 DEHYTN-----SIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLF 235
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 15 KYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKI------------MRVGLADQIK 62
+Y + R LG G F+ V+ A+ + N VA+K++ DK+ RV AD K
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 63 REI----SVMRIVRH-----PN---IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKL 110
+ +++++ H PN +V ++EV+ ++ + + +Y G V
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLG-ENLLALIKKYEHRGIPLIYV----- 133
Query: 111 KEDAARRYFQQLINAVDFCHSR-GVYHRDIKPXXXXX------XXXXXXKISDFGLSALA 163
++ +QL+ +D+ H R G+ H DIKP KI+D G +
Sbjct: 134 -----KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY 188
Query: 164 QCKHQDGLLHTTCGTPAYVAPEVINRKGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ + + T Y +PEV+ + G DIWS ++F L+ G F
Sbjct: 189 DEHYTN-----SIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLF 235
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K + L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLRQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 193
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 194 RIYTHQS-DVWSYGVTVWELMTFGSKPY 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 27/273 (9%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV----R 72
+ G+ LG GAF KV A + + AV + + AD+ + +S ++I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-----------------LKEDAA 115
H NIV L + + EY G+L N + + + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT 175
+ Q+ + F S+ HRD+ KI DFGL A + ++
Sbjct: 169 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGN 227
Query: 176 CGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEF 233
P ++APE I Y + D+WS G++L+ + + G P+ + + K+ K +
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQS-DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 286
Query: 234 KC--PNWFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P + P + ++ P+ R + +I
Sbjct: 287 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 36/272 (13%)
Query: 17 EVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV----R 72
+ G+ LG GAF KV A + + AV + + AD+ + +S ++I+ +
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 73 HPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAK-----------------GKLKEDA- 114
H NIV L + + EY G+L N + + G KED
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 115 ------ARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQ 168
+ Q+ + F S+ HRD+ KI DFGL A
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDS 212
Query: 169 DGLLHTTCGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYR 226
+ ++ P ++APE I Y + D+WS G++L+ + + G P+ + +
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQS-DVWSYGILLWEIFSLGLNPYPGILVNSKFY 271
Query: 227 KIGKAEFKC--PNWFPPEVRKLL--CKILDPN 254
K+ K ++ P + P + ++ C L+P
Sbjct: 272 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 303
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 17 EVGRLLGQGAFAKVYYAR-SIRTNQSVAVKVIDKDKIMRVGLADQIKR----EISVMRIV 71
++ +++G G F +V + + + V + K ++ G ++ +R E S+M
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAI----KTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 72 RHPNIVQLYEVMATKSKIFFVMEYAKGGEL--FNKVAKGKLKEDAARRYFQQLINAVDFC 129
HPN++ L V+ + + + E+ + G L F + G+ + + + +
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 130 HSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA---YVAPEV 186
HR + K+SDFGLS + D + G + APE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 187 INRKGYDGEKVDIWSCGVVLF-VLLAGYLPFHD 218
I + + D+WS G+V++ V+ G P+ D
Sbjct: 186 IQYRKFTSAS-DVWSYGIVMWEVMSYGERPYWD 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 29/277 (10%)
Query: 15 KYEVGRLLGQGAFAKVYYARS---IRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV 71
+ G+ LG GAF KV A + I+++ ++ V V + + + E+ V+ +
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 99
Query: 72 -RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-------------------LK 111
H NIV L + EY G+L N + + + L
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 112 EDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGL 171
+ + Q+ + F S+ HRD+ KI DFGL+ + + +
Sbjct: 160 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYV 218
Query: 172 LHTTCGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIG 229
+ P ++APE I Y E D+WS G+ L+ L + G P+ + + K+
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
Query: 230 KAEFK--CPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
K F+ P P E+ ++ D +P R + +I
Sbjct: 278 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 81 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 195
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 196 RIYTHQS-DVWSYGVTVWELMTFGSKPY 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 88
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 89 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 145
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 203
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 204 RIYTHQS-DVWSYGVTVWELMTFGSKPY 230
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS--NLIEMYRKIGKAEF 233
+ YD +D+WS G +L ++ PF HD+ L+ + + +G +
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 196
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 197 RIYTHQS-DVWSYGVTVWELMTFGSKPY 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 196
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 197 RIYTHQS-DVWSYGVTVWELMTFGSKPY 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 84
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 85 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 141
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 199
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 200 RIYTHQS-DVWSYGVTVWELMTFGSKPY 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 196
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 197 RIYTHQS-DVWSYGVTVWELMTFGSKPY 223
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 75
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 76 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAEGMNYLED 132
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 190
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 191 RIYTHQS-DVWSYGVTVWELMTFGSKPY 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--YVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 193
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 194 RIYTHQS-DVWSYGVTVWELMTFGSKPY 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 85
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 142
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 200
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 201 RIYTHQS-DVWSYGVTVWELMTFGSKPY 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 103
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 104 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 160
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPA--YVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G ++A E I
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 218
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 219 RIYTHQS-DVWSYGVTVWELMTFGSKPY 245
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 193
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 194 RIYTHQS-DVWSYGVTVWELMTFGSKPY 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 29/273 (10%)
Query: 19 GRLLGQGAFAKVYYARS---IRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-RHP 74
G+ LG GAF KV A + I+++ ++ V V + + + E+ V+ + H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-------------------LKEDAA 115
NIV L + EY G+L N + + + L +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT 175
+ Q+ + F S+ HRD+ KI DFGL+ + + ++
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK-NDSNYVVKGN 229
Query: 176 CGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEF 233
P ++APE I Y E D+WS G+ L+ L + G P+ + + K+ K F
Sbjct: 230 ARLPVKWMAPESIFNCVYTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 234 K--CPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P P E+ ++ D +P R + +I
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++L GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 85
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 86 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 142
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 200
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 201 RIYTHQS-DVWSYGVTVWELMTFGSKPY 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFG + L + ++ H G P ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILH 195
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 196 RIYTHQS-DVWSYGVTVWELMTFGSKPY 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFG + L + ++ H G P ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILH 195
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 196 RIYTHQS-DVWSYGVTVWELMTFGSKPY 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 82
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + +M+ G L + V + K ++ +Y Q+ +++
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 139
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFG + L + ++ H G P ++A E I
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILH 197
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 198 RIYTHQS-DVWSYGVTVWELMTFGSKPY 224
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ YD +D+WS G +L ++ PF
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 20 RLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREI----SVMRIVRHPN 75
++LG GAF VY I + V + V K+ +R + + +EI VM V +P+
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 72
Query: 76 IVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQ----QLINAVDFCHS 131
+ +L + T S + + + G L + V + K ++ +Y Q+ +++
Sbjct: 73 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 129
Query: 132 RGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTTCG-TP-AYVAPEVINR 189
R + HRD+ KI+DFGL+ L + ++ H G P ++A E I
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 187
Query: 190 KGYDGEKVDIWSCGVVLFVLLA-GYLPF 216
+ Y + D+WS GV ++ L+ G P+
Sbjct: 188 RIYTHQS-DVWSYGVTVWELMTFGSKPY 214
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 96
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 154
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 155 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 211
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 212 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 243
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ YD +D+WS G +L ++ PF
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 90
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 148
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 149 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ YD +D+WS G +L ++ PF
Sbjct: 206 QMYD-YSLDMWSLGCMLASMIFRKEPF 231
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 90
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 148
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 149 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 205
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 206 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 237
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 109/278 (39%), Gaps = 29/278 (10%)
Query: 14 EKYEVGRLLGQGAFAKVYYARS---IRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRI 70
+ G+ LG GAF KV A + I+++ ++ V V + + + E+ V+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 71 V-RHPNIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-------------------L 110
+ H NIV L + EY G+L N + + + L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 111 KEDAARRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDG 170
+ + Q+ + F S+ HRD+ KI DFGL+ + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNY 201
Query: 171 LLHTTCGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKI 228
++ P ++APE I Y E D+WS G+ L+ L + G P+ + + K+
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260
Query: 229 GKAEFK--CPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
K F+ P P E+ ++ D +P R + +I
Sbjct: 261 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ YD +D+WS G +L ++ PF
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 89
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 147
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 148 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 204
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ YD +D+WS G +L ++ PF
Sbjct: 205 QMYD-YSLDMWSLGCMLASMIFRKEPF 230
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVK-----ILKPVKKKKIKREIKILENLRGG 91
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
PNI+ L +++ V E+ + K L + R Y +++ A+D+CHS
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF---HDS 219
+ YD +D+WS G +L ++ PF HD+
Sbjct: 207 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 29/273 (10%)
Query: 19 GRLLGQGAFAKVYYARS---IRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-RHP 74
G+ LG GAF KV A + I+++ ++ V V + + + E+ V+ + H
Sbjct: 46 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-------------------LKEDAA 115
NIV L + EY G+L N + + + L +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT 175
+ Q+ + F S+ HRD+ KI DFGL+ + + ++
Sbjct: 166 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYVVKGN 224
Query: 176 CGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEF 233
P ++APE I Y E D+WS G+ L+ L + G P+ + + K+ K F
Sbjct: 225 ARLPVKWMAPESIFNCVYTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 283
Query: 234 K--CPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P P E+ ++ D +P R + +I
Sbjct: 284 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 29/273 (10%)
Query: 19 GRLLGQGAFAKVYYARS---IRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIV-RHP 74
G+ LG GAF KV A + I+++ ++ V V + + + E+ V+ + H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 75 NIVQLYEVMATKSKIFFVMEYAKGGELFNKVAKGK-------------------LKEDAA 115
NIV L + EY G+L N + + + L +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 116 RRYFQQLINAVDFCHSRGVYHRDIKPXXXXXXXXXXXKISDFGLSALAQCKHQDGLLHTT 175
+ Q+ + F S+ HRD+ KI DFGL+ + + ++
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYVVKGN 229
Query: 176 CGTPA-YVAPEVINRKGYDGEKVDIWSCGVVLFVLLA-GYLPFHDSNLIEMYRKIGKAEF 233
P ++APE I Y E D+WS G+ L+ L + G P+ + + K+ K F
Sbjct: 230 ARLPVKWMAPESIFNCVYTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 234 K--CPNWFPPEVRKLLCKILDPNPSTRISMAKI 264
+ P P E+ ++ D +P R + +I
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 14 EKYEVGRLLGQGAFAKVYYARSIRTNQSVAVKVIDKDKIMRVGLADQIKREISVMRIVRH 73
+ Y++ R LG+G +++V+ A +I N+ V VK + V + + +
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVK-----ILKPVKKKKIKREVKILENLRGG 92
Query: 74 PNIVQLYEVM--ATKSKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCHS 131
NI++L + + V EY + K L + R Y +L+ A+D+CHS
Sbjct: 93 TNIIKLIDTVKDPVSKTPALVFEYINNTDF--KQLYQILTDFDIRFYMYELLKALDYCHS 150
Query: 132 RGVYHRDIKPXXXX-XXXXXXXKISDFGLSALAQCKHQDGLLHTTCGTPAYVAPE-VINR 189
+G+ HRD+KP ++ D+G LA+ H + + + PE +++
Sbjct: 151 KGIMHRDVKPHNVMIDHQQKKLRLIDWG---LAEFYHPAQEYNVRVASRYFKGPELLVDY 207
Query: 190 KGYDGEKVDIWSCGVVLFVLLAGYLPF 216
+ YD +D+WS G +L ++ PF
Sbjct: 208 QMYD-YSLDMWSLGCMLASMIFRREPF 233
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 22 LGQGAFAKVYYARSIRTNQSVAVKVI---DKDKIMRVGLADQIKREISVMRIVRHPNIVQ 78
+G+G + +V+ R ++VAVK+ D+ R + E+ ++RH NI+
Sbjct: 16 VGKGRYGEVW--RGSWQGENVAVKIFSSRDEKSWFR-------ETELYNTVMLRHENILG 66
Query: 79 LYEVMATK----SKIFFVMEYAKGGELFNKVAKGKLKEDAARRYFQQLINAVDFCH---- 130
T ++++ + Y + G L++ + L + R + + + H
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 131 -SRG---VYHRDIKPXXXXXXXXXXXKISDFGLSAL-AQCKHQ-DGLLHTTCGTPAYVAP 184
++G + HRD+K I+D GL+ + +Q +Q D + GT Y+AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 185 EVINRK----GYDG-EKVDIWSCGVVLFVLLAGYL----------PFHD----SNLIEMY 225
EV++ +D ++VDIW+ G+VL+ + + PF+D E
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 226 RKIGKAEFKCPN----WFPPEVRKLLCKILDP----NPSTRISMAKIRES 267
RK+ + + PN WF L K++ NPS R++ +I+++
Sbjct: 247 RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,914,740
Number of Sequences: 62578
Number of extensions: 437087
Number of successful extensions: 4392
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 315
Number of HSP's that attempted gapping in prelim test: 1162
Number of HSP's gapped (non-prelim): 1200
length of query: 479
length of database: 14,973,337
effective HSP length: 103
effective length of query: 376
effective length of database: 8,527,803
effective search space: 3206453928
effective search space used: 3206453928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)