Query 011702
Match_columns 479
No_of_seqs 279 out of 817
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 04:17:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011702.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011702hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 1.3E-67 2.8E-72 561.9 25.6 343 132-477 97-459 (464)
2 PF03016 Exostosin: Exostosin 100.0 3.9E-56 8.5E-61 444.8 21.6 277 147-431 2-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 100.0 3.2E-31 6.9E-36 275.6 20.9 349 90-472 127-525 (907)
4 KOG1022 Acetylglucosaminyltran 99.9 6.2E-22 1.4E-26 206.1 16.9 291 134-449 79-388 (691)
5 cd03801 GT1_YqgM_like This fam 97.4 0.0014 3E-08 64.0 11.4 104 346-453 257-363 (374)
6 PF00852 Glyco_transf_10: Glyc 97.2 0.00071 1.5E-08 70.5 7.2 149 281-437 137-303 (349)
7 PF00534 Glycos_transf_1: Glyc 97.2 0.0012 2.6E-08 60.0 7.6 96 345-444 73-170 (172)
8 cd03820 GT1_amsD_like This fam 97.1 0.0035 7.5E-08 61.2 10.6 95 357-453 244-340 (348)
9 cd03814 GT1_like_2 This family 97.1 0.0034 7.4E-08 62.4 10.4 94 357-453 258-353 (364)
10 PLN02871 UDP-sulfoquinovose:DA 96.9 0.0047 1E-07 66.2 10.2 109 347-459 314-427 (465)
11 cd03821 GT1_Bme6_like This fam 96.9 0.0068 1.5E-07 59.9 10.6 129 319-453 234-367 (375)
12 cd03794 GT1_wbuB_like This fam 96.7 0.011 2.4E-07 58.5 10.7 104 346-453 276-387 (394)
13 cd03822 GT1_ecORF704_like This 96.7 0.0063 1.4E-07 60.6 8.8 93 357-453 259-355 (366)
14 cd05844 GT1_like_7 Glycosyltra 96.7 0.017 3.7E-07 58.5 11.9 129 319-453 219-358 (367)
15 cd03819 GT1_WavL_like This fam 96.7 0.016 3.5E-07 58.2 11.2 102 346-453 247-353 (355)
16 cd03818 GT1_ExpC_like This fam 96.6 0.017 3.8E-07 60.1 11.5 118 332-453 266-388 (396)
17 TIGR03088 stp2 sugar transfera 96.6 0.016 3.4E-07 59.4 11.0 128 319-454 229-361 (374)
18 cd03808 GT1_cap1E_like This fa 96.6 0.02 4.4E-07 56.0 11.1 102 346-453 247-351 (359)
19 TIGR03449 mycothiol_MshA UDP-N 96.5 0.018 3.9E-07 59.8 11.1 131 320-454 253-390 (405)
20 cd03809 GT1_mtfB_like This fam 96.5 0.016 3.6E-07 57.6 10.0 103 346-454 254-358 (365)
21 cd04962 GT1_like_5 This family 96.4 0.03 6.4E-07 56.8 11.6 102 346-453 254-358 (371)
22 cd03823 GT1_ExpE7_like This fa 96.2 0.028 6E-07 55.6 9.8 88 357-447 254-344 (359)
23 cd03825 GT1_wcfI_like This fam 96.2 0.034 7.3E-07 55.8 10.3 95 356-453 255-352 (365)
24 cd03799 GT1_amsK_like This is 96.1 0.04 8.7E-07 55.0 10.6 106 345-454 236-350 (355)
25 PRK15427 colanic acid biosynth 96.1 0.043 9.4E-07 58.0 11.1 104 346-453 280-393 (406)
26 cd03807 GT1_WbnK_like This fam 96.0 0.051 1.1E-06 53.5 10.3 93 357-454 260-355 (365)
27 cd03817 GT1_UGDG_like This fam 96.0 0.092 2E-06 51.9 12.1 101 346-451 260-362 (374)
28 cd03811 GT1_WabH_like This fam 95.9 0.094 2E-06 51.0 11.9 90 358-450 256-351 (353)
29 cd04951 GT1_WbdM_like This fam 95.9 0.054 1.2E-06 54.2 10.3 101 345-453 245-348 (360)
30 TIGR02149 glgA_Coryne glycogen 95.8 0.062 1.3E-06 55.1 10.6 96 356-454 271-375 (388)
31 cd03800 GT1_Sucrose_synthase T 95.8 0.02 4.3E-07 58.4 6.6 94 357-453 294-390 (398)
32 PRK15484 lipopolysaccharide 1, 95.7 0.08 1.7E-06 55.3 11.0 105 346-454 258-366 (380)
33 cd03798 GT1_wlbH_like This fam 95.7 0.055 1.2E-06 53.1 9.3 94 357-453 270-364 (377)
34 cd03805 GT1_ALG2_like This fam 95.7 0.11 2.4E-06 53.3 11.8 105 344-453 279-386 (392)
35 cd03804 GT1_wbaZ_like This fam 95.5 0.047 1E-06 55.5 8.1 82 345-431 242-323 (351)
36 PRK10307 putative glycosyl tra 95.2 0.074 1.6E-06 55.7 8.7 129 320-454 260-396 (412)
37 TIGR02095 glgA glycogen/starch 95.1 0.11 2.3E-06 55.9 9.9 92 358-454 358-461 (473)
38 PRK14098 glycogen synthase; Pr 95.1 0.068 1.5E-06 58.2 8.4 96 358-458 374-478 (489)
39 PRK09814 beta-1,6-galactofuran 95.1 0.054 1.2E-06 55.6 7.1 89 357-451 218-317 (333)
40 cd03806 GT1_ALG11_like This fa 95.1 0.19 4.1E-06 53.4 11.3 130 319-453 273-414 (419)
41 PRK00654 glgA glycogen synthas 95.0 0.14 3E-06 55.1 10.3 93 358-455 349-452 (466)
42 cd04955 GT1_like_6 This family 95.0 0.2 4.4E-06 50.2 11.0 128 319-454 221-353 (363)
43 cd04949 GT1_gtfA_like This fam 94.7 0.21 4.5E-06 51.0 10.1 93 358-453 271-366 (372)
44 cd03802 GT1_AviGT4_like This f 94.5 0.25 5.5E-06 49.0 10.1 100 345-453 224-324 (335)
45 cd03796 GT1_PIG-A_like This fa 94.4 0.18 3.8E-06 52.7 9.0 107 346-458 251-360 (398)
46 cd03791 GT1_Glycogen_synthase_ 94.3 0.21 4.5E-06 53.4 9.5 92 358-454 363-465 (476)
47 cd03792 GT1_Trehalose_phosphor 94.2 0.24 5.2E-06 51.0 9.5 105 345-454 252-360 (372)
48 cd04946 GT1_AmsK_like This fam 94.2 0.34 7.4E-06 51.1 10.7 104 346-453 290-399 (407)
49 PRK14099 glycogen synthase; Pr 94.2 0.36 7.9E-06 52.5 11.1 97 357-458 360-471 (485)
50 PRK09922 UDP-D-galactose:(gluc 94.2 0.19 4.1E-06 51.7 8.5 124 319-446 210-340 (359)
51 cd03795 GT1_like_4 This family 94.0 0.44 9.5E-06 47.6 10.6 105 345-453 244-354 (357)
52 cd03816 GT1_ALG1_like This fam 94.0 0.31 6.7E-06 51.6 9.9 120 319-447 269-399 (415)
53 PF13524 Glyco_trans_1_2: Glyc 93.9 0.17 3.7E-06 41.6 6.2 80 370-453 3-84 (92)
54 cd03813 GT1_like_3 This family 93.8 0.35 7.6E-06 52.2 10.0 94 357-453 362-464 (475)
55 TIGR02472 sucr_P_syn_N sucrose 93.4 0.15 3.3E-06 54.2 6.4 94 358-454 329-429 (439)
56 TIGR03087 stp1 sugar transfera 93.1 0.42 9E-06 49.9 8.9 91 358-454 290-385 (397)
57 PHA01633 putative glycosyl tra 92.8 0.21 4.5E-06 52.0 6.2 94 357-453 215-327 (335)
58 PLN02949 transferase, transfer 92.5 1.5 3.2E-05 47.6 12.4 105 345-453 335-444 (463)
59 cd03812 GT1_CapH_like This fam 92.5 0.47 1E-05 47.5 8.1 79 346-431 250-328 (358)
60 cd03793 GT1_Glycogen_synthase_ 92.0 0.18 3.9E-06 56.0 4.7 109 357-466 466-588 (590)
61 PHA01630 putative group 1 glyc 91.9 0.37 7.9E-06 49.9 6.5 95 357-454 201-319 (331)
62 PRK15490 Vi polysaccharide bio 91.4 1 2.2E-05 50.0 9.7 93 358-453 465-563 (578)
63 PF13692 Glyco_trans_1_4: Glyc 90.7 0.18 3.9E-06 43.8 2.5 77 346-430 54-131 (135)
64 KOG2619 Fucosyltransferase [Ca 89.7 2.3 5.1E-05 44.8 10.1 146 281-433 158-318 (372)
65 TIGR02918 accessory Sec system 89.4 2.5 5.4E-05 46.3 10.5 93 358-453 385-487 (500)
66 TIGR02468 sucrsPsyn_pln sucros 88.5 0.97 2.1E-05 53.5 7.0 93 359-454 561-659 (1050)
67 KOG1387 Glycosyltransferase [C 86.3 5.3 0.00012 41.9 9.9 128 320-450 306-443 (465)
68 PLN02939 transferase, transfer 86.2 1.8 3.8E-05 50.9 7.2 96 360-459 851-960 (977)
69 PRK13609 diacylglycerol glucos 85.0 5.3 0.00011 41.3 9.6 106 331-448 242-354 (380)
70 cd01635 Glycosyltransferase_GT 84.5 4.3 9.3E-05 37.1 7.8 78 319-398 135-213 (229)
71 PLN00142 sucrose synthase 83.9 3.3 7.1E-05 48.1 7.9 92 360-454 660-759 (815)
72 PRK10125 putative glycosyl tra 82.5 4.7 0.0001 42.8 8.1 67 357-427 298-364 (405)
73 PLN02605 monogalactosyldiacylg 82.2 9.2 0.0002 39.8 10.0 78 358-445 275-361 (382)
74 PRK13608 diacylglycerol glucos 81.3 5 0.00011 42.1 7.7 84 358-450 266-356 (391)
75 PRK15179 Vi polysaccharide bio 80.7 8.4 0.00018 44.1 9.7 92 358-454 584-682 (694)
76 cd04950 GT1_like_1 Glycosyltra 79.5 2.8 6.1E-05 43.5 5.1 99 346-453 255-359 (373)
77 PLN02316 synthase/transferase 79.2 8.6 0.00019 45.9 9.3 96 361-459 915-1027(1036)
78 TIGR01133 murG undecaprenyldip 78.1 3.8 8.2E-05 41.4 5.4 83 358-445 243-334 (348)
79 TIGR02470 sucr_synth sucrose s 76.1 6.5 0.00014 45.5 7.0 86 366-454 644-736 (784)
80 cd03788 GT1_TPS Trehalose-6-Ph 75.0 4 8.7E-05 44.1 4.8 91 356-451 351-447 (460)
81 COG0438 RfaG Glycosyltransfera 72.3 13 0.00027 35.3 7.1 104 346-453 258-364 (381)
82 PLN02275 transferase, transfer 70.7 17 0.00036 37.8 8.1 102 319-427 261-366 (371)
83 PRK05749 3-deoxy-D-manno-octul 69.2 5.5 0.00012 42.0 4.2 88 358-449 312-405 (425)
84 smart00672 CAP10 Putative lipo 69.0 50 0.0011 33.1 10.7 131 316-449 81-231 (256)
85 cd03785 GT1_MurG MurG is an N- 67.1 33 0.00071 34.5 9.2 93 345-446 235-338 (350)
86 TIGR02400 trehalose_OtsA alpha 66.5 21 0.00045 38.7 8.0 89 356-450 346-441 (456)
87 PRK00726 murG undecaprenyldiph 65.7 8.5 0.00018 39.3 4.6 88 357-448 244-340 (357)
88 PRK00025 lpxB lipid-A-disaccha 65.3 24 0.00053 36.2 8.0 86 358-450 254-359 (380)
89 PF05686 Glyco_transf_90: Glyc 62.9 60 0.0013 34.6 10.5 130 316-447 155-298 (395)
90 TIGR00236 wecB UDP-N-acetylglu 58.9 92 0.002 31.9 10.9 97 323-430 234-330 (365)
91 PLN02846 digalactosyldiacylgly 52.8 49 0.0011 36.1 7.8 38 361-399 296-333 (462)
92 PF00919 UPF0004: Uncharacteri 48.4 24 0.00052 30.1 3.8 43 151-203 1-43 (98)
93 COG0297 GlgA Glycogen synthase 43.1 1.3E+02 0.0027 33.3 9.1 100 358-459 361-471 (487)
94 PLN02501 digalactosyldiacylgly 41.8 53 0.0011 38.0 6.1 38 360-398 613-650 (794)
95 PLN03063 alpha,alpha-trehalose 41.4 1E+02 0.0022 36.1 8.6 90 357-451 367-463 (797)
96 TIGR03590 PseG pseudaminic aci 40.1 70 0.0015 32.1 6.3 33 357-395 233-265 (279)
97 PF13528 Glyco_trans_1_3: Glyc 38.2 48 0.001 33.0 4.8 108 316-432 191-318 (318)
98 PRK14094 psbM photosystem II r 26.9 79 0.0017 23.6 2.9 14 28-45 30-43 (50)
99 PRK11865 pyruvate ferredoxin o 26.9 2.2E+02 0.0047 29.4 7.3 78 368-450 209-295 (299)
100 PRK14501 putative bifunctional 26.0 1.1E+02 0.0023 35.3 5.4 108 356-472 352-466 (726)
101 PF07038 DUF1324: Protein of u 23.7 53 0.0011 24.6 1.6 40 363-405 6-46 (59)
102 PF15582 Imm40: Immunity prote 21.5 1.2E+02 0.0025 30.9 3.9 61 358-440 261-322 (327)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=1.3e-67 Score=561.91 Aligned_cols=343 Identities=42% Similarity=0.691 Sum_probs=300.6
Q ss_pred cccCcccchHhHHHhhCCCeEEEecCCCCCcccCC--CCCCccchHHHHHHHHhccCCcccCCCCCCceEEEeeccchhh
Q 011702 132 IYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYG--PCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWM 209 (479)
Q Consensus 132 ~y~~~~~f~~sy~~m~~~fKVYVY~~g~~p~~h~~--p~~~~Ys~E~~f~~~L~~~~S~~rT~dP~eA~lFyvP~~~~~~ 209 (479)
++++...|..+|..|++.+|||+|.+|+.+.+|.+ .++++|+.|++||+.|+...++|||.||+|||+|||||++++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~ 176 (464)
T KOG1021|consen 97 TSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLD 176 (464)
T ss_pred ccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEe
Confidence 68999999999999999999999999988888877 7899999999999999732389999999999999999999976
Q ss_pred h-hhhcCCCCCCchhhhHHHHHHHHHHhccCccccccCCCcEEEEecCCCCCccccCCcccccceeEEeec-CCCCCCcc
Q 011702 210 V-KYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCN-ANTSEGFN 287 (479)
Q Consensus 210 ~-~~ly~p~~~~~~~l~~~l~~yv~~i~~~~PyWNRs~G~DHflv~~hDwg~~~~~~~p~l~~n~i~vl~~-a~~s~~Fr 287 (479)
. ++++.|.......+...+.+||..+.++||||||++|+|||+++||+|++...........+.|+..|+ ++.+.+|.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~ 256 (464)
T KOG1021|consen 177 YNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFF 256 (464)
T ss_pred hhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchheeeccchhhHHHHHHhhCCcceeecccc
Confidence 5 667777655556677888999988899999999999999999999999988755444445567778888 77889999
Q ss_pred CC-CCcccCceeccCCccCC---CCCCCCCCCCCCCeEEEeccc-ccchhhHHHHHhhccCCCCeEEecccCC-------
Q 011702 288 PQ-KDVTLPEIHLYGGYVSP---KLLSPPPFNAPRPYLAFFAGG-LHGTIRSILLQHWKGHDKDLIVFEYLPK------- 355 (479)
Q Consensus 288 p~-kDVsiP~~~~~~~~~~~---~~~~~~p~~~~R~~L~fFaG~-~~g~iR~~L~~~~~~~d~dv~v~e~~~~------- 355 (479)
+. +||+||++....+.... ...+.+. .+|++|+||+|+ .+|.+|+.|+++|++ +++...+..|+.
T Consensus 257 ~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~--~~R~~L~~F~G~~~~~~iR~~L~~~~~~-~~~~~~~~~~~~g~~~~~~ 333 (464)
T KOG1021|consen 257 PWNKDVAIPYPTIPHPLSPPENSWQGGVPF--SNRPILAFFAGAPAGGQIRSILLDLWKK-DPDTEVFVNCPRGKVSCDR 333 (464)
T ss_pred cCCCcccCCCccCcCccCccccccccCCCC--CCCceEEEEeccccCCcHHHHHHHHhhc-CcCccccccCCCCccccCC
Confidence 99 99999998655443221 1223333 789999999999 899999999999999 555444433332
Q ss_pred ChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH-HHHHhcCCHH
Q 011702 356 DQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL-KEVLMAVPEE 434 (479)
Q Consensus 356 ~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L-~~iL~sIs~~ 434 (479)
...|.+.|++|+|||||+|++++|+|++|||.+|||||||+|++.+||++++||++|||+|++++++++ +++|.+|+.+
T Consensus 334 ~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~ 413 (464)
T KOG1021|consen 334 PLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKDVPELIKNILLSIPEE 413 (464)
T ss_pred cchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHHhhhHHHHHHHhcCHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHH-HHHhhceecC--CCCCcCHHHHHHHHHHHhhhccc
Q 011702 435 KYKRLKENLK-AVRRHFELNH--PAKRFDVFHMILHSIWLRRLNMR 477 (479)
Q Consensus 435 ~i~~mq~~l~-~v~~~f~~~~--p~~~~Daf~mil~~lw~Rr~n~~ 477 (479)
++.+||+++. .+.+||+++. +++++|||||+++++|.|+++++
T Consensus 414 ~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~ 459 (464)
T KOG1021|consen 414 EVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLR 459 (464)
T ss_pred HHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccc
Confidence 9999999999 5999999998 88999999999999999999877
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=3.9e-56 Score=444.85 Aligned_cols=277 Identities=34% Similarity=0.607 Sum_probs=219.5
Q ss_pred hCCCeEEEecCCCC--------C--cccCCCCCCccchHHHHHHHHhccCCcccCCCCCCceEEEeeccchhhhhhh-cC
Q 011702 147 EKRFKVYVYREGEL--------P--ITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYL-YK 215 (479)
Q Consensus 147 ~~~fKVYVY~~g~~--------p--~~h~~p~~~~Ys~E~~f~~~L~~~~S~~rT~dP~eA~lFyvP~~~~~~~~~l-y~ 215 (479)
+++||||||+++.. . ..+....+.+|++|.+|++.|++ |+++|.||+|||+||||+++.+..... +.
T Consensus 2 ~~~lkVYVY~lp~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~l~~--s~~~T~dp~eAdlF~vP~~~~~~~~~~~~~ 79 (302)
T PF03016_consen 2 HRGLKVYVYPLPPKFNKDLLDPREDEQCSWYETSQYALEVILHEALLN--SPFRTDDPEEADLFFVPFYSSCYFHHWWGS 79 (302)
T ss_pred CCCCEEEEEeCCccccccceeccccccCCCcccccchHHHHHHHHHHh--CCcEeCCHHHCeEEEEEcccccccccccCC
Confidence 57999999999721 1 11233457899999999999999 999999999999999999998763111 11
Q ss_pred CCCCCchhhhHHHHHHHHHHhccCccccccCCCcEEEEecCCCCCccccCCcccccceeEEee-cCC-CCCCccCCCCcc
Q 011702 216 PLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLC-NAN-TSEGFNPQKDVT 293 (479)
Q Consensus 216 p~~~~~~~l~~~l~~yv~~i~~~~PyWNRs~G~DHflv~~hDwg~~~~~~~p~l~~n~i~vl~-~a~-~s~~Frp~kDVs 293 (479)
+ ........+.+++..+.+++|||||++|+||||+++||||.+.....+.+..+.+.+++ ++. ...+|+|++||+
T Consensus 80 ~---~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 156 (302)
T PF03016_consen 80 P---NSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIV 156 (302)
T ss_pred c---cchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhheeccCCCCcCcccCCCCee
Confidence 1 11223345667777888999999999999999999999988877666666667666663 333 467799999999
Q ss_pred cCceeccCCc-cCCCCCCCCCCCCCCCeEEEeccccc-------chhhHHHHHhhccCCCCeEE---ecccCCChhHHhh
Q 011702 294 LPEIHLYGGY-VSPKLLSPPPFNAPRPYLAFFAGGLH-------GTIRSILLQHWKGHDKDLIV---FEYLPKDQDYYSF 362 (479)
Q Consensus 294 iP~~~~~~~~-~~~~~~~~~p~~~~R~~L~fFaG~~~-------g~iR~~L~~~~~~~d~dv~v---~e~~~~~~~y~~~ 362 (479)
+|.+...... ........++ .+|++|++|+|+.. +.+|..|++.|++. ++..+ .+.+....+|.+.
T Consensus 157 ~P~~~~~~~~~~~~~~~~~~~--~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (302)
T PF03016_consen 157 IPPFVPPSSLPDWRPWPQRPP--ARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSD-PDFRCSDGSETCPSPSEYMEL 233 (302)
T ss_pred ccccccccccCCccccccCCc--cCCceEEEEeeeccccccccchhhhhHHHHhcccC-CcceeeecccccccchHHHHh
Confidence 9998644331 1111112334 78999999999863 46999999999774 33332 2233455689999
Q ss_pred cccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC
Q 011702 363 MLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV 431 (479)
Q Consensus 363 m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI 431 (479)
|++|||||||+|+++++.||+|||.+|||||||+|+++|||+|+|||++|||+|+++++++|+++|++|
T Consensus 234 l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~~i 302 (302)
T PF03016_consen 234 LRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILRSI 302 (302)
T ss_pred cccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=275.58 Aligned_cols=349 Identities=16% Similarity=0.269 Sum_probs=241.8
Q ss_pred chhhHHHHHHHHHHHHHHHHhhccCCccccc---------CCCcccccCcccccCcccchHhHHHhhCCCeEEEecCCCC
Q 011702 90 LSKYEQLKQGLARARASIRKAASTRNVTSII---------KNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGEL 160 (479)
Q Consensus 90 ~s~l~~~~~~l~~a~~~i~~a~~~~n~~~~~---------~~~~~~~~~~~~y~~~~~f~~sy~~m~~~fKVYVY~~g~~ 160 (479)
...|++++.++.||+.+.+|+....|-.-.+ +.+-.+.....--+-.+||+-|.|....+|.||||+....
T Consensus 127 q~eL~~Lk~~ieqaq~~~~El~~~n~pkl~LP~sllP~~~pr~l~pp~~~~~c~lhncfdySRCsltSgfPVYvyd~D~~ 206 (907)
T KOG2264|consen 127 QLELSALKGEIEQAQRQLEELRETNNPKLFLPFSLLPLQIPRELEPPSQISPCQLHNCFDYSRCSLTSGFPVYVYDSDII 206 (907)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCceeeccccCcccCcccCCCccccCcccchhccccccccccCCceeEEecccee
Confidence 4688999999999999999998763322111 1111222223334557899999999999999999996532
Q ss_pred CcccCCCCCCccchHHHHHHHHhc--cCCcccCCCCCCceEEEeeccchhhhhhhcCCCCCCchhhhHHHHHHHHHHhcc
Q 011702 161 PITHYGPCKDIYTIEGRFMSEIEH--GAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSK 238 (479)
Q Consensus 161 p~~h~~p~~~~Ys~E~~f~~~L~~--~~S~~rT~dP~eA~lFyvP~~~~~~~~~ly~p~~~~~~~l~~~l~~yv~~i~~~ 238 (479)
+..|...++..+.+.. +..-|.|+||+.||++++-+.. ...|....+..+. .+ -+
T Consensus 207 --------~~G~~~d~~lk~~fq~t~~~n~~~ve~pd~ACiyi~lvge------~q~P~~l~p~ele--------kl-ys 263 (907)
T KOG2264|consen 207 --------TSGQSEDEWLKQVFQETIPNNVYLVETPDKACIYIHLVGE------IQSPVVLTPAELE--------KL-YS 263 (907)
T ss_pred --------ecccchHHHHHHHHHHhcccceeEeeCCCccEEEEEEecc------ccCCCcCChHhhh--------hh-hc
Confidence 2344445555555553 3367899999999999986532 2234322222221 11 47
Q ss_pred CccccccCCCcEEEEecCCCCCccccCCccccc-ceeEE--eecCCCCCCccCCCCcccCceec-cCCccCCCCCCCCCC
Q 011702 239 YPFWNRTCGADHFMLACHDWGPHVSKGNSHLYN-NSIRV--LCNANTSEGFNPQKDVTLPEIHL-YGGYVSPKLLSPPPF 314 (479)
Q Consensus 239 ~PyWNRs~G~DHflv~~hDwg~~~~~~~p~l~~-n~i~v--l~~a~~s~~Frp~kDVsiP~~~~-~~~~~~~~~~~~~p~ 314 (479)
+|||. ++|.||++++..- ...+.++ +++ ++.++ +-.+.+...||||+|..+|++.- ..++........-|
T Consensus 264 lp~w~-~dg~Nhvl~Nl~r---~s~~~n~-lyn~~t~raivvQssf~~~q~RpgfDl~V~pv~h~~~e~~~~e~~p~vP- 337 (907)
T KOG2264|consen 264 LPHWR-TDGFNHVLFNLGR---PSDTQNL-LYNFQTGRAIVVQSSFYTVQIRPGFDLPVDPVNHIAVEKNFVELTPLVP- 337 (907)
T ss_pred Ccccc-CCCcceEEEEccC---ccccccc-eeEeccCceEEEeecceeeeeccCCCcccCcccccccCccceecCcccc-
Confidence 89997 5999999998652 2222232 222 22232 22456788899999999997653 33332222223445
Q ss_pred CCCCCeEEEecccccc------hhhHHHHHhhccC------CCCeEEecc-----------------cCCChhHHhhccc
Q 011702 315 NAPRPYLAFFAGGLHG------TIRSILLQHWKGH------DKDLIVFEY-----------------LPKDQDYYSFMLK 365 (479)
Q Consensus 315 ~~~R~~L~fFaG~~~g------~iR~~L~~~~~~~------d~dv~v~e~-----------------~~~~~~y~~~m~~ 365 (479)
.+|++|+.|+|.+.. ..+....++..+. |..+....| |....+-.++++.
T Consensus 338 -~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~ 416 (907)
T KOG2264|consen 338 -FQRKYLITLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKS 416 (907)
T ss_pred -hhhheeEEEEeeecccccccchhhhhHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhcc
Confidence 789999999997642 2333333332221 111221111 2223467899999
Q ss_pred ceEEEe-eCCCC-C----CCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHH
Q 011702 366 SKFCLC-PSGYE-V----ASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRL 439 (479)
Q Consensus 366 SkFCL~-P~G~~-~----~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs~~~i~~m 439 (479)
|+|||+ |+|++ + .-.|++||+..||||||+++...|||+|.|||.+.++++|...+++++-+|+++.+.++.+|
T Consensus 417 STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrraal~lPkaR~tE~HFllrs~~dsDll~m 496 (907)
T KOG2264|consen 417 STFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRRAALRLPKARLTEAHFLLRSFEDSDLLEM 496 (907)
T ss_pred ceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHHHhhhCCccccchHHHHHHhcchhhHHHH
Confidence 999998 77874 2 23799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhceecCCCCCcCHHHHHHHHHHHh
Q 011702 440 KENLKAVRRHFELNHPAKRFDVFHMILHSIWLR 472 (479)
Q Consensus 440 q~~l~~v~~~f~~~~p~~~~Daf~mil~~lw~R 472 (479)
|++++.+|+.++-.. .-.++++|.+|..|
T Consensus 497 RRqGRl~wEtYls~~----~~~~~tvlA~lR~r 525 (907)
T KOG2264|consen 497 RRQGRLFWETYLSDR----HLLARTVLAALRYR 525 (907)
T ss_pred HhhhhhhHHHHhhHH----HHHHHHHHHHHHHh
Confidence 999999999997643 25678888888765
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.88 E-value=6.2e-22 Score=206.12 Aligned_cols=291 Identities=18% Similarity=0.179 Sum_probs=198.3
Q ss_pred cCcccchH----hHHHhhCCCeEEEecCCCCCcccCCCCCCccchHHHHHHHHhc-cCCcccCCCCCCceEEEeeccchh
Q 011702 134 RNPGAFYQ----SYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEH-GAKRFRTSDPHRAHVYYLPFSVAW 208 (479)
Q Consensus 134 ~~~~~f~~----sy~~m~~~fKVYVY~~g~~p~~h~~p~~~~Ys~E~~f~~~L~~-~~S~~rT~dP~eA~lFyvP~~~~~ 208 (479)
.++++|-. =|+=.-.+.|||+|..++..+...-...... |....+.+++ ..|.|+|.|+++||+|......-+
T Consensus 79 g~~sc~~~dcf~~y~c~~~~~KvyIy~l~~~vd~~s~~~~~T~--s~ey~~lleA~~~S~yyt~n~N~aclf~Ps~d~ln 156 (691)
T KOG1022|consen 79 GLPSCFLADCFLYYQCLFFETKVYIYMLGDIVDAKSIDKGATW--SPEYIALLEAWHLSFYYTFNYNGACLFMPSSDELN 156 (691)
T ss_pred CCccceehhhhhhhhccccccceeEEehhhhhhhhcccccccc--cHHHHHHHHHHHhccceecCCCceEEEecchhhhc
Confidence 55555532 2444667899999999876443322223333 3445555665 339999999999999998665532
Q ss_pred hhhhhcCCCCCCchhhhHHHHHHHHHHhccCccccccCCCcEEEEecCCCCCccccCCcccccceeEEeecCCCCCCccC
Q 011702 209 MVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNP 288 (479)
Q Consensus 209 ~~~~ly~p~~~~~~~l~~~l~~yv~~i~~~~PyWNRs~G~DHflv~~hDwg~~~~~~~p~l~~n~i~vl~~a~~s~~Frp 288 (479)
. ..+...++ +.+.++.-.|.| |+||..++.-.-|+..-....+.-+.-+.....+..++.||+
T Consensus 157 Q------------n~l~~kl~---~~ala~l~~wdr--g~nH~~fnmLpGg~p~yntaldv~~d~a~~~gggf~tW~yr~ 219 (691)
T KOG1022|consen 157 Q------------NPLSWKLE---KVALAKLLVWDR--GVNHEGFNMLPGGDPTYNTALDVGQDEAWYSGGGFGTWKYRK 219 (691)
T ss_pred c------------CcchHHHH---HHHHhcccchhc--ccceeeEeeccCCCCCccccccCCcceeEEecCCcCcccccC
Confidence 1 12222222 233467789999 999999986544432211111100101112223456788999
Q ss_pred CCCcccCceeccCCccCCCCCCCCCCCCCCCeEEEecc-cccchhhHHHHHhhccCCCCeEEecc-----------cC--
Q 011702 289 QKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAG-GLHGTIRSILLQHWKGHDKDLIVFEY-----------LP-- 354 (479)
Q Consensus 289 ~kDVsiP~~~~~~~~~~~~~~~~~p~~~~R~~L~fFaG-~~~g~iR~~L~~~~~~~d~dv~v~e~-----------~~-- 354 (479)
|.||.+|.+++. ..+.+..+. ..|..++--+| +.+-.+|..|.+........+...+. ++
T Consensus 220 g~dv~ipv~Sp~--~v~~~~~~~----g~r~~~l~~~q~n~~pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~~qhH 293 (691)
T KOG1022|consen 220 GNDVYIPVRSPG--NVGRAFLYD----GSRYRVLQDCQENYGPRIRVSLIELLSKHEERELELPFCLNLSLNSRGVRQHH 293 (691)
T ss_pred CCcccccccccc--ccCccccCC----ccceeeeeccccccchHhHHhHHHHHhhccceEEecchhccccccccchhhcc
Confidence 999999998654 233222222 45666555444 44557888777655443333332221 11
Q ss_pred CChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCCHH
Q 011702 355 KDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEE 434 (479)
Q Consensus 355 ~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs~~ 434 (479)
...+|...+...+||+.-+|.+.+.+-+++-+++||+|||+.|.|.+||.+|+||...||.++|..+.++.++|++|+..
T Consensus 294 ~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~~aSv~~~e~~~~~v~~~l~~i~~~ 373 (691)
T KOG1022|consen 294 FDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWIVASVWCMEYYAGKVMDALLNIETA 373 (691)
T ss_pred cccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhceeeeEEeehhhHHHHHHHhhcchhc
Confidence 23479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 011702 435 KYKRLKENLKAVRRH 449 (479)
Q Consensus 435 ~i~~mq~~l~~v~~~ 449 (479)
.+-+||.|....+-.
T Consensus 374 ~i~sl~~r~~~~rl~ 388 (691)
T KOG1022|consen 374 GICSLQLRRIGSRLN 388 (691)
T ss_pred chhhhhhhhhhhhHh
Confidence 999999887655433
No 5
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.41 E-value=0.0014 Score=64.04 Aligned_cols=104 Identities=21% Similarity=0.305 Sum_probs=79.7
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+.+.+..+ ..++.+.|..|.+.++|.-.+..+..++||+++|| |||.++. ..+.+.+.-....+.++..+..++.
T Consensus 257 ~v~~~g~~~-~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 257 RVTFLGFVP-DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred ceEEEeccC-hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHHHH
Confidence 344444433 35788999999999999877777788999999998 6777775 4466667667788888888888887
Q ss_pred HHHhcC--CHHHHHHHHHHHH-HHHhhceec
Q 011702 426 EVLMAV--PEEKYKRLKENLK-AVRRHFELN 453 (479)
Q Consensus 426 ~iL~sI--s~~~i~~mq~~l~-~v~~~f~~~ 453 (479)
+.|..+ .++...+|.++.+ .+.+.|.|.
T Consensus 333 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (374)
T cd03801 333 EAILRLLDDPELRRRLGEAARERVAERFSWD 363 (374)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHhcCHH
Confidence 777764 4677888888887 678888775
No 6
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=97.22 E-value=0.00071 Score=70.50 Aligned_cols=149 Identities=15% Similarity=0.170 Sum_probs=71.9
Q ss_pred CCCCCccCCCCcccCceeccCCccCCC--CCCCCCCCCCCCeEEEecccccc-hhhHHHHHhhccCCCCeEEecccC-C-
Q 011702 281 NTSEGFNPQKDVTLPEIHLYGGYVSPK--LLSPPPFNAPRPYLAFFAGGLHG-TIRSILLQHWKGHDKDLIVFEYLP-K- 355 (479)
Q Consensus 281 ~~s~~Frp~kDVsiP~~~~~~~~~~~~--~~~~~p~~~~R~~L~fFaG~~~g-~iR~~L~~~~~~~d~dv~v~e~~~-~- 355 (479)
|++-+||..-||.+|............ ...... ..+++..++++.++.+ .-|..+++.+... -.|..++.|. .
T Consensus 137 N~TMTYr~dSDi~~py~~~~~~~~~~~~~~~~~~~-~~K~~~~~w~~Snc~~~~~R~~~~~~L~~~-~~vd~yG~c~~~~ 214 (349)
T PF00852_consen 137 NWTMTYRRDSDIPLPYGYFSPRESPSEKDDLPNIL-KKKTKLAAWIVSNCNPHSGREEYVRELSKY-IPVDSYGKCGNNN 214 (349)
T ss_dssp -------------------------------------TSSEEEEE--S-S--H-HHHHHHHHHHTT-S-EEE-SSTT--S
T ss_pred ccccccccccccccccccccccccccccccccccc-cCCCceEEEEeeCcCCcccHHHHHHHHHhh-cCeEccCCCCCCC
Confidence 455678999999999754322111100 001111 1233455566666543 2488888888776 5677888772 1
Q ss_pred ---ChhHHhhcccceEEEeeCC---CCCCCchHHHHHhcCcEeEEec--C-Cc--cCCCCCCCCCCcEEEEEcCCChhhH
Q 011702 356 ---DQDYYSFMLKSKFCLCPSG---YEVASPRIVESIYAQCVPVILS--Q-NY--VLPFSDVLRWEAFSIQVDVSEIPRL 424 (479)
Q Consensus 356 ---~~~y~~~m~~SkFCL~P~G---~~~~s~Rl~EAi~~GCIPViis--d-~~--~LPF~dvLDW~~fsV~v~e~di~~L 424 (479)
.....+.+++-||.|+.-- .+..+--+++|+.+|||||+++ . ++ .+|=...|+.++|. .+.+|
T Consensus 215 ~~~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~------s~~~L 288 (349)
T PF00852_consen 215 PCPRDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFK------SPKEL 288 (349)
T ss_dssp SS--S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSS------SHHHH
T ss_pred CcccccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCC------CHHHH
Confidence 2358899999999999642 3445788999999999999999 3 22 35547778777774 67788
Q ss_pred HHHHhcCC--HHHHH
Q 011702 425 KEVLMAVP--EEKYK 437 (479)
Q Consensus 425 ~~iL~sIs--~~~i~ 437 (479)
.+.|+.+. ++.|.
T Consensus 289 a~yl~~l~~n~~~Y~ 303 (349)
T PF00852_consen 289 ADYLKYLDKNDELYN 303 (349)
T ss_dssp HHHHHHHHT-HHHHH
T ss_pred HHHHHHHhcCHHHHh
Confidence 88888774 44444
No 7
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.19 E-value=0.0012 Score=60.00 Aligned_cols=96 Identities=21% Similarity=0.347 Sum_probs=65.0
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL 424 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L 424 (479)
..+.+.+..+ ..+..+.++.|.+.++|+..+..+.-++|||.+|| |||+++. -.+.+++.=..-.+.++..++.++
T Consensus 73 ~~i~~~~~~~-~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~--~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 73 ENIIFLGYVP-DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDI--GGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TTEEEEESHS-HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESS--THHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccccccccc-ccccccccccceecccccccccccccccccccccc-ceeeccc--cCCceeeccccceEEeCCCCHHHH
Confidence 3566665544 45788999999999999999989999999999999 6677773 223344322335567777788888
Q ss_pred HHHHhcCCH--HHHHHHHHHHH
Q 011702 425 KEVLMAVPE--EKYKRLKENLK 444 (479)
Q Consensus 425 ~~iL~sIs~--~~i~~mq~~l~ 444 (479)
.+.+..+-. +...+|.++.+
T Consensus 149 ~~~i~~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 149 ADAIEKLLNDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCHHHHHHHHHHhc
Confidence 887777643 44555555544
No 8
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.12 E-value=0.0035 Score=61.16 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=72.8
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEE 434 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~ 434 (479)
.+..+.|+++.+++.|...+..+..++|||++||. ||.+|....+ .++++-....+.++..++.++.+.+..+ .++
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~P-vi~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~ 321 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLP-VISFDCPTGP-SEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE 321 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCC-EEEecCCCch-HhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 46788999999999999877777889999999995 5566532222 2344444577788888888777777766 578
Q ss_pred HHHHHHHHHHHHHhhceec
Q 011702 435 KYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 435 ~i~~mq~~l~~v~~~f~~~ 453 (479)
...+|.++.+.+.+.|.|.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~ 340 (348)
T cd03820 322 LRKRMGANARESAERFSIE 340 (348)
T ss_pred HHHHHHHHHHHHHHHhCHH
Confidence 8889999998888888875
No 9
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.10 E-value=0.0034 Score=62.37 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=72.9
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEE 434 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~ 434 (479)
.+..+.|+.|..|++|.+.+..+..++|||++|| |||.+|.- ...+++.=....+.++..+..++.+.+..+ .++
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAG--GPADIVTDGENGLLVEPGDAEAFAAALAALLADPE 334 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCC--CchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHH
Confidence 4678899999999999988888889999999999 88888743 234455434667777888877666655554 478
Q ss_pred HHHHHHHHHHHHHhhceec
Q 011702 435 KYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 435 ~i~~mq~~l~~v~~~f~~~ 453 (479)
.+.+|+++.++..+.|.|.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~ 353 (364)
T cd03814 335 LRRRMAARARAEAERRSWE 353 (364)
T ss_pred HHHHHHHHHHHHHhhcCHH
Confidence 8899999988877788775
No 10
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=96.91 E-value=0.0047 Score=66.24 Aligned_cols=109 Identities=12% Similarity=0.170 Sum_probs=81.8
Q ss_pred eEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCC---CcEEEEEcCCChhh
Q 011702 347 LIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRW---EAFSIQVDVSEIPR 423 (479)
Q Consensus 347 v~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW---~~fsV~v~e~di~~ 423 (479)
+.+.+..+ ..+..+.|+.+..+++|...+..+.-++|||++| +|||.++.- ...++++= ....+.++..|..+
T Consensus 314 V~f~G~v~-~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~g--g~~eiv~~~~~~~~G~lv~~~d~~~ 389 (465)
T PLN02871 314 TVFTGMLQ-GDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAG--GIPDIIPPDQEGKTGFLYTPGDVDD 389 (465)
T ss_pred eEEeccCC-HHHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCC--CcHhhhhcCCCCCceEEeCCCCHHH
Confidence 44444432 2578899999999999998888888899999999 799998742 33455532 67788888888887
Q ss_pred HHHHHhcC--CHHHHHHHHHHHHHHHhhceecCCCCCc
Q 011702 424 LKEVLMAV--PEEKYKRLKENLKAVRRHFELNHPAKRF 459 (479)
Q Consensus 424 L~~iL~sI--s~~~i~~mq~~l~~v~~~f~~~~p~~~~ 459 (479)
+.+.|..+ .++...+|.++.++..+.|.|..-..+.
T Consensus 390 la~~i~~ll~~~~~~~~~~~~a~~~~~~fsw~~~a~~l 427 (465)
T PLN02871 390 CVEKLETLLADPELRERMGAAAREEVEKWDWRAATRKL 427 (465)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 77666654 4677889999998877888887544443
No 11
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=96.90 E-value=0.0068 Score=59.92 Aligned_cols=129 Identities=19% Similarity=0.269 Sum_probs=80.1
Q ss_pred CeEEEecccccchhhHHHHHh--hccCCCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEec
Q 011702 319 PYLAFFAGGLHGTIRSILLQH--WKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILS 396 (479)
Q Consensus 319 ~~L~fFaG~~~g~iR~~L~~~--~~~~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViis 396 (479)
.+-+.+.|...+.....+... -.+.++.+.+.+..+ ..+..+.|..+.++++|.-.+..+..++|||++|| |||.+
T Consensus 234 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~ 311 (375)
T cd03821 234 DWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLY-GEDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTT 311 (375)
T ss_pred CeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCC-hHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEc
Confidence 345566665444333332221 112223455555443 24678889999999999887777888999999997 88888
Q ss_pred CCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHH-Hhhceec
Q 011702 397 QNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKAV-RRHFELN 453 (479)
Q Consensus 397 d~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~v-~~~f~~~ 453 (479)
+.- +..+++.= ...+.++.+ ..++.+.+..+ .++...+|.++.++. .++|.|.
T Consensus 312 ~~~--~~~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 312 DKV--PWQELIEY-GCGWVVDDD-VDALAAALRRALELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCC--CHHHHhhc-CceEEeCCC-hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 742 23333322 444444443 35555544443 246788888888876 8888875
No 12
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=96.74 E-value=0.011 Score=58.51 Aligned_cols=104 Identities=14% Similarity=0.207 Sum_probs=73.2
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCC-----CchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCC
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVA-----SPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSE 420 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~-----s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~d 420 (479)
.+.+.+..+ ..++.+.|..+.++++|...+.. ...++||+++|| |||.++.-.. .+.+.=....+.++..+
T Consensus 276 ~v~~~g~~~-~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~--~~~~~~~~~g~~~~~~~ 351 (394)
T cd03794 276 NVTFLGRVP-KEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGES--AELVEEAGAGLVVPPGD 351 (394)
T ss_pred cEEEeCCCC-hHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCc--hhhhccCCcceEeCCCC
Confidence 454444322 34788899999999999876643 456899999997 8888775322 22222225677788888
Q ss_pred hhhHHHHHhcC--CHHHHHHHHHHHHHHH-hhceec
Q 011702 421 IPRLKEVLMAV--PEEKYKRLKENLKAVR-RHFELN 453 (479)
Q Consensus 421 i~~L~~iL~sI--s~~~i~~mq~~l~~v~-~~f~~~ 453 (479)
+.++.+.|..+ .++++.+|.++.+... ++|.|.
T Consensus 352 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 352 PEALAAAILELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 88887777776 6788888988887654 488775
No 13
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=96.72 E-value=0.0063 Score=60.64 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=71.6
Q ss_pred hhHHhhcccceEEEeeCCCC--CCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 011702 357 QDYYSFMLKSKFCLCPSGYE--VASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--P 432 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~--~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s 432 (479)
.+..+.|+.+.+++.|..++ ..+..+.|||++|| |||.+|.-. .+++.+ ..-.+.++..+..++.+.|..+ .
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~-~~~g~~~~~~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLD-GGTGLLVPPGDPAALAEAIRRLLAD 334 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeee-CCCcEEEcCCCHHHHHHHHHHHHcC
Confidence 46889999999999999888 77888999999999 999988432 333334 3446677777877777776664 3
Q ss_pred HHHHHHHHHHHHHHHhhceec
Q 011702 433 EEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 433 ~~~i~~mq~~l~~v~~~f~~~ 453 (479)
+++..+|+++.+...+.|.|.
T Consensus 335 ~~~~~~~~~~~~~~~~~~s~~ 355 (366)
T cd03822 335 PELAQALRARAREYARAMSWE 355 (366)
T ss_pred hHHHHHHHHHHHHHHhhCCHH
Confidence 478889999998877778775
No 14
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.70 E-value=0.017 Score=58.47 Aligned_cols=129 Identities=15% Similarity=0.186 Sum_probs=84.7
Q ss_pred CeEEEecccccchhhHHHHHhhcc--CCCCeEEecccCCChhHHhhcccceEEEeeCCC------CCCCchHHHHHhcCc
Q 011702 319 PYLAFFAGGLHGTIRSILLQHWKG--HDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGY------EVASPRIVESIYAQC 390 (479)
Q Consensus 319 ~~L~fFaG~~~g~iR~~L~~~~~~--~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~------~~~s~Rl~EAi~~GC 390 (479)
.+-+.++|. |..+..+.+..++ ..+.+.+.+..+ ..+..+.|..|..+++|.-. +.....++|||++||
T Consensus 219 ~~~l~ivG~--g~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~ 295 (367)
T cd05844 219 EVRLVIIGD--GPLLAALEALARALGLGGRVTFLGAQP-HAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV 295 (367)
T ss_pred CeEEEEEeC--chHHHHHHHHHHHcCCCCeEEECCCCC-HHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC
Confidence 456667774 3334433333222 123455555433 24677889999998888642 334678999999997
Q ss_pred EeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHH-HHhhceec
Q 011702 391 VPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 391 IPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
|||.+|.-. ..+++.=....+.++..+..++.+.|..+ .++...+|.++.+. +.++|.|.
T Consensus 296 -PvI~s~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 296 -PVVATRHGG--IPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred -CEEEeCCCC--chhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 999888633 34555445677888888888777666654 35667788877765 56888885
No 15
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.65 E-value=0.016 Score=58.16 Aligned_cols=102 Identities=16% Similarity=0.098 Sum_probs=75.6
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeC-CCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPS-GYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL 424 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~-G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L 424 (479)
.+.+.+. ..+..+.|+.|..+++|. -.+....-++|||++|| |||.+|. -+..+++.-..-.+.++..+...+
T Consensus 247 ~v~~~g~---~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~l 320 (355)
T cd03819 247 RVTFVGH---CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEAL 320 (355)
T ss_pred eEEEcCC---cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHHH
Confidence 3555443 346889999999999997 45555678999999999 8888873 455667766667788888899888
Q ss_pred HHHHh-cC--CHHHHHHHHHHHHH-HHhhceec
Q 011702 425 KEVLM-AV--PEEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 425 ~~iL~-sI--s~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
.+.|. .+ ++++..+|.++.++ +.++|.|.
T Consensus 321 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~ 353 (355)
T cd03819 321 AQALDQILSLLPEGRAKMFAKARMCVETLFSYD 353 (355)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhc
Confidence 77773 32 67888888888776 46777654
No 16
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.62 E-value=0.017 Score=60.12 Aligned_cols=118 Identities=17% Similarity=0.203 Sum_probs=83.4
Q ss_pred hhHHHHHhhcc--CCCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCC
Q 011702 332 IRSILLQHWKG--HDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRW 409 (479)
Q Consensus 332 iR~~L~~~~~~--~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW 409 (479)
.++.+++.... ..+.+.+.+..+ ..++.+.|..|.-++.|.-.+..+.-++|||++|| |||.+|. -+..+++.=
T Consensus 266 ~~~~~~~~~~~~~~~~~V~f~G~v~-~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~--~g~~e~i~~ 341 (396)
T cd03818 266 WKQHMLDELGGRLDLSRVHFLGRVP-YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDT--APVREVITD 341 (396)
T ss_pred HHHHHHHHhhcccCcceEEEeCCCC-HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCC--CCchhhccc
Confidence 45555555443 123566666554 24688899999999998876666678999999999 8888874 356677766
Q ss_pred CcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHH-HHhhceec
Q 011702 410 EAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 410 ~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
..-.+.++..|...+.+.+..+ .++...+|.++.++ +.++|.|.
T Consensus 342 ~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~ 388 (396)
T cd03818 342 GENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLS 388 (396)
T ss_pred CCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHH
Confidence 6677888888887766655543 35677888888876 55668775
No 17
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.61 E-value=0.016 Score=59.45 Aligned_cols=128 Identities=16% Similarity=0.124 Sum_probs=85.0
Q ss_pred CeEEEecccccchhhHHHHHhhccC--CCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEec
Q 011702 319 PYLAFFAGGLHGTIRSILLQHWKGH--DKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILS 396 (479)
Q Consensus 319 ~~L~fFaG~~~g~iR~~L~~~~~~~--d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViis 396 (479)
++-+.+.|. |..+..+.+..+.. +..+.+.+. ..+..+.|+.|..+++|.-.+....-++|||++|| |||.+
T Consensus 229 ~~~l~i~G~--g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s 302 (374)
T TIGR03088 229 RLRLVIVGD--GPARGACEQMVRAAGLAHLVWLPGE---RDDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIAT 302 (374)
T ss_pred ceEEEEecC--CchHHHHHHHHHHcCCcceEEEcCC---cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEc
Confidence 455666663 44444443333222 122333321 34678899999999999877777788999999997 99998
Q ss_pred CCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHH-HHhhceecC
Q 011702 397 QNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 397 d~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
|. -...+++.-......++..+..++.+.|..+ .++...+|.++.++ +.++|.|..
T Consensus 303 ~~--~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 361 (374)
T TIGR03088 303 AV--GGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINA 361 (374)
T ss_pred CC--CCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 85 2345666656678888888888777766654 35666777766665 457887753
No 18
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=96.58 E-value=0.02 Score=56.03 Aligned_cols=102 Identities=13% Similarity=0.137 Sum_probs=72.7
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+.+.+. ..+..+.|+.|..|++|...+..+..++||+++|| |||.+|.-. ..+.+.=....+.++..+..++.
T Consensus 247 ~v~~~g~---~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~--~~~~i~~~~~g~~~~~~~~~~~~ 320 (359)
T cd03808 247 RVEFLGF---RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPG--CREAVIDGVNGFLVPPGDAEALA 320 (359)
T ss_pred eEEEeec---cccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCC--chhhhhcCcceEEECCCCHHHHH
Confidence 3444443 34678899999999999988777888999999996 788877432 23444324556778888887777
Q ss_pred HHHhcC--CHHHHHHHHHHHHHH-Hhhceec
Q 011702 426 EVLMAV--PEEKYKRLKENLKAV-RRHFELN 453 (479)
Q Consensus 426 ~iL~sI--s~~~i~~mq~~l~~v-~~~f~~~ 453 (479)
+.+..+ .++.+.+|.++.++. .++|.|.
T Consensus 321 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 321 DAIERLIEDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 666654 467778887777665 7777664
No 19
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=96.55 E-value=0.018 Score=59.77 Aligned_cols=131 Identities=12% Similarity=0.083 Sum_probs=86.4
Q ss_pred eEEEeccccc--c-hhhHHHHHhhccC--CCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEE
Q 011702 320 YLAFFAGGLH--G-TIRSILLQHWKGH--DKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVI 394 (479)
Q Consensus 320 ~L~fFaG~~~--g-~iR~~L~~~~~~~--d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPVi 394 (479)
.-+.+.|+.. | ..+..+.+..+.. .+.+.+.+..+ ..+..+.|+.+..|+.|.=.+..+.-++|||++|| |||
T Consensus 253 ~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~-~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi 330 (405)
T TIGR03449 253 LRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRP-PEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVV 330 (405)
T ss_pred eEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCC-HHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEE
Confidence 5566666542 3 3333333322221 23466655442 34678899999999998766666778999999997 888
Q ss_pred ecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHHHhhceecC
Q 011702 395 LSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKAVRRHFELNH 454 (479)
Q Consensus 395 isd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~v~~~f~~~~ 454 (479)
.++.- ...+++.=....+.++..|..++.+.|..+ .++...+|.++.++..++|.|..
T Consensus 331 ~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 331 AARVG--GLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred EecCC--CcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHH
Confidence 88742 233455434556777888887766555543 46677899998888778888864
No 20
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.49 E-value=0.016 Score=57.58 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=76.2
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+.+.+..+ ..+..+.+..+.+++.|.-.+..+.-++||+++|| |||.++.- ...+++ ....+.++..+..++.
T Consensus 254 ~v~~~g~~~-~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~--~~~e~~--~~~~~~~~~~~~~~~~ 327 (365)
T cd03809 254 RVRFLGYVS-DEELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNIS--SLPEVA--GDAALYFDPLDPEALA 327 (365)
T ss_pred eEEECCCCC-hhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCC--Ccccee--cCceeeeCCCCHHHHH
Confidence 455554443 34678899999999999766666777999999997 77777642 344444 3567778888888887
Q ss_pred HHHhc-C-CHHHHHHHHHHHHHHHhhceecC
Q 011702 426 EVLMA-V-PEEKYKRLKENLKAVRRHFELNH 454 (479)
Q Consensus 426 ~iL~s-I-s~~~i~~mq~~l~~v~~~f~~~~ 454 (479)
+.|.. + .++...+|.++.+.+.+.|.|..
T Consensus 328 ~~i~~l~~~~~~~~~~~~~~~~~~~~~sw~~ 358 (365)
T cd03809 328 AAIERLLEDPALREELRERGLARAKRFSWEK 358 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhCCHHH
Confidence 77777 3 47778888888888888888853
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.43 E-value=0.03 Score=56.77 Aligned_cols=102 Identities=17% Similarity=0.288 Sum_probs=76.0
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+.+.+.. .+..+.|..+..+++|.-.+..+.-++|||++| +|||.+|.- ...+++.-..-...++..+..++.
T Consensus 254 ~v~~~g~~---~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~--~~~e~i~~~~~G~~~~~~~~~~l~ 327 (371)
T cd04962 254 DVLFLGKQ---DHVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAG--GIPEVVKHGETGFLVDVGDVEAMA 327 (371)
T ss_pred eEEEecCc---ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCC--CchhhhcCCCceEEcCCCCHHHHH
Confidence 35555432 357888999999999987777778899999999 688888753 345666555556677888887776
Q ss_pred HHHhcC--CHHHHHHHHHHHHHH-Hhhceec
Q 011702 426 EVLMAV--PEEKYKRLKENLKAV-RRHFELN 453 (479)
Q Consensus 426 ~iL~sI--s~~~i~~mq~~l~~v-~~~f~~~ 453 (479)
+.+..+ .++.+.+|+++.+.. .++|.|.
T Consensus 328 ~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~ 358 (371)
T cd04962 328 EYALSLLEDDELWQEFSRAARNRAAERFDSE 358 (371)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 666554 577889999988876 7888775
No 22
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=96.22 E-value=0.028 Score=55.56 Aligned_cols=88 Identities=20% Similarity=0.217 Sum_probs=65.2
Q ss_pred hhHHhhcccceEEEeeCC-CCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 011702 357 QDYYSFMLKSKFCLCPSG-YEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PE 433 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G-~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 433 (479)
.+..+.|+.+..+++|.- .+..+..++|||++| +|||.++. ....++++.....+.++..|+.++.+.+..+ .+
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~--~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDI--GGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP 330 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCC--CCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh
Confidence 577889999999999974 455677899999999 57777764 2345666666678888888887766665554 46
Q ss_pred HHHHHHHHHHHHHH
Q 011702 434 EKYKRLKENLKAVR 447 (479)
Q Consensus 434 ~~i~~mq~~l~~v~ 447 (479)
+...+|+++.+...
T Consensus 331 ~~~~~~~~~~~~~~ 344 (359)
T cd03823 331 DLLERLRAGIEPPR 344 (359)
T ss_pred HHHHHHHHhHHHhh
Confidence 77777777765543
No 23
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=96.19 E-value=0.034 Score=55.82 Aligned_cols=95 Identities=14% Similarity=0.152 Sum_probs=68.7
Q ss_pred ChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 011702 356 DQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PE 433 (479)
Q Consensus 356 ~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 433 (479)
..+..+.|+.|.+++.|...+..+.-++|||.+|| |||.++. -+..+++.=..-.+.++..+..++.+.|..+ .+
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~-PvI~~~~--~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDV--GGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP 331 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCC-CEEEecC--CCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence 34577889999999999988888889999999999 5666663 3444555444567777877777666555543 45
Q ss_pred HHHHHHHHHHHHH-Hhhceec
Q 011702 434 EKYKRLKENLKAV-RRHFELN 453 (479)
Q Consensus 434 ~~i~~mq~~l~~v-~~~f~~~ 453 (479)
++..+|.++.+.. .+.|.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~~ 352 (365)
T cd03825 332 DEREELGEAARELAENEFDSR 352 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 6688888887764 4667653
No 24
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=96.15 E-value=0.04 Score=55.03 Aligned_cols=106 Identities=12% Similarity=0.161 Sum_probs=73.1
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCCC------CCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcC
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGY------EVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDV 418 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~------~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e 418 (479)
+.+.+.+..+ ..+..+.|+++.++++|... +..+..++||+++||- ||.++. ....+++.=..-...+++
T Consensus 236 ~~v~~~g~~~-~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~P-vi~~~~--~~~~~~i~~~~~g~~~~~ 311 (355)
T cd03799 236 DRVTLLGAKS-QEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLP-VISTDV--SGIPELVEDGETGLLVPP 311 (355)
T ss_pred CeEEECCcCC-hHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCC-EEecCC--CCcchhhhCCCceEEeCC
Confidence 3455555543 35788999999999999766 5567889999999995 455553 223455543445677777
Q ss_pred CChhhHHHHHhcC--CHHHHHHHHHHHHH-HHhhceecC
Q 011702 419 SEIPRLKEVLMAV--PEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 419 ~di~~L~~iL~sI--s~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
.+..++.+.|..+ .+++..+|.++.++ +.++|.|..
T Consensus 312 ~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~ 350 (355)
T cd03799 312 GDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRK 350 (355)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 7877666665554 36668888888875 567787753
No 25
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=96.10 E-value=0.043 Score=58.01 Aligned_cols=104 Identities=13% Similarity=0.183 Sum_probs=74.6
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCC------CCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCC
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGY------EVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVS 419 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~------~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~ 419 (479)
.+.+.+..+ ..+..+.|+.+..+++|.=. +....-++|||++|| |||.++.-- ..|++.=..-.+.+++.
T Consensus 280 ~V~~~G~~~-~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~-PVI~t~~~g--~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 280 VVEMPGFKP-SHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGI-PVVSTLHSG--IPELVEADKSGWLVPEN 355 (406)
T ss_pred eEEEeCCCC-HHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCC-CEEEeCCCC--chhhhcCCCceEEeCCC
Confidence 455555443 34678899999999998621 333466999999996 999987532 33555445567788999
Q ss_pred ChhhHHHHHhcC---CHHHHHHHHHHHHH-HHhhceec
Q 011702 420 EIPRLKEVLMAV---PEEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 420 di~~L~~iL~sI---s~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
|..++.+.|..+ ++++..+|.++.++ +.++|.|.
T Consensus 356 d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~ 393 (406)
T PRK15427 356 DAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQ 393 (406)
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHH
Confidence 998887777665 56778889888875 67888775
No 26
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=95.99 E-value=0.051 Score=53.46 Aligned_cols=93 Identities=14% Similarity=0.123 Sum_probs=66.4
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEE 434 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~ 434 (479)
.+..+.|+.+..+++|...+..+.-++||+++|| |||.+|.-. ..+.++= ..+.++..+..++.+.+..+ .++
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~--~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGD--NAELVGD--TGFLVPPGDPEALAEAIEALLADPA 334 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCC--hHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChH
Confidence 3577899999999999988877889999999997 788876421 2233321 56677777777766666554 346
Q ss_pred HHHHHHHHHHH-HHhhceecC
Q 011702 435 KYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 435 ~i~~mq~~l~~-v~~~f~~~~ 454 (479)
++.+|.++.++ +.+.|.|..
T Consensus 335 ~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 335 LRQALGEAARERIEENFSIEA 355 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 77777777765 567787753
No 27
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=95.96 E-value=0.092 Score=51.93 Aligned_cols=101 Identities=17% Similarity=0.253 Sum_probs=66.7
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+.+.+..+ ..+..+.|..|.++++|...+..+..++|||++|| |||.++.- .+.+.+.=..-.+.++..+. ++.
T Consensus 260 ~v~~~g~~~-~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~ 334 (374)
T cd03817 260 RVIFTGFVP-REELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP--GLPDLVADGENGFLFPPGDE-ALA 334 (374)
T ss_pred cEEEeccCC-hHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCC--ChhhheecCceeEEeCCCCH-HHH
Confidence 344444433 34678899999999999988777889999999987 56666532 23454444455666666653 444
Q ss_pred HHHhcC--CHHHHHHHHHHHHHHHhhce
Q 011702 426 EVLMAV--PEEKYKRLKENLKAVRRHFE 451 (479)
Q Consensus 426 ~iL~sI--s~~~i~~mq~~l~~v~~~f~ 451 (479)
+.+..+ .++...+|+++.+...+.+.
T Consensus 335 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 335 EALLRLLQDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 433333 35566788888888776654
No 28
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=95.95 E-value=0.094 Score=51.03 Aligned_cols=90 Identities=19% Similarity=0.239 Sum_probs=62.0
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH----HHHHhcCC-
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL----KEVLMAVP- 432 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L----~~iL~sIs- 432 (479)
+..+.++.+.++++|.-.+..+..++||+++|| |||.+|.- ...+++.=....+.++..+...+ ..++....
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGT-PVVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCC-CEEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 456789999999999877767788999999999 56666543 33455554566777888887775 33333333
Q ss_pred HHHHHHHHH-HHHHHHhhc
Q 011702 433 EEKYKRLKE-NLKAVRRHF 450 (479)
Q Consensus 433 ~~~i~~mq~-~l~~v~~~f 450 (479)
++...+|.. +...+.++|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~ 351 (353)
T cd03811 333 PELRERLAAAARERVAREY 351 (353)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 555666777 455556655
No 29
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=95.92 E-value=0.054 Score=54.22 Aligned_cols=101 Identities=13% Similarity=0.220 Sum_probs=68.5
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL 424 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L 424 (479)
+.+.+.+.. .+..+.|+.+...++|...+....-++|||++|| |||.+|.- ...+++. .....++..+..++
T Consensus 245 ~~v~~~g~~---~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~--~~g~~~~~~~~~~~ 316 (360)
T cd04951 245 NRVKLLGLR---DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAG--GVREVVG--DSGLIVPISDPEAL 316 (360)
T ss_pred CcEEEeccc---ccHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCC--ChhhEec--CCceEeCCCCHHHH
Confidence 345555432 3567889999999999988777888999999999 88888741 2333332 14455666777766
Q ss_pred HHHHhcC---CHHHHHHHHHHHHHHHhhceec
Q 011702 425 KEVLMAV---PEEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 425 ~~iL~sI---s~~~i~~mq~~l~~v~~~f~~~ 453 (479)
.+.+..+ +++....|.++-..+.+.|.|.
T Consensus 317 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~ 348 (360)
T cd04951 317 ANKIDEILKMSGEERDIIGARRERIVKKFSIN 348 (360)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHH
Confidence 6666554 4555566666644577888774
No 30
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=95.84 E-value=0.062 Score=55.10 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=69.4
Q ss_pred ChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCCh------hhHHHHHh
Q 011702 356 DQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEI------PRLKEVLM 429 (479)
Q Consensus 356 ~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di------~~L~~iL~ 429 (479)
..+..+.|..|..+++|.-++....-++||+++|| |||.+|.- ...+++.=....+.++..+. ..+.+.|.
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~--~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATG--GIPEVVVDGETGFLVPPDNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCC--CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHH
Confidence 35678899999999999877777778899999999 89988742 23355543445666776665 56655555
Q ss_pred cC--CHHHHHHHHHHHHH-HHhhceecC
Q 011702 430 AV--PEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 430 sI--s~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
.+ .+++..+|.++.++ +.+.|.|..
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~~~~~s~~~ 375 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRAEEEFSWGS 375 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 43 47778888888776 567888853
No 31
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=95.77 E-value=0.02 Score=58.43 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=70.8
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEE 434 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~ 434 (479)
.+..+.++.|..+++|.-.+....-++|||++|+ |||.++. -...+++.=....+.++..+..++.+.+..+ .++
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~-Pvi~s~~--~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 370 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGL-PVVATAV--GGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPA 370 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCC-CEEECCC--CCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHH
Confidence 3577889999999999877777778999999995 9999874 2344555444567778887887776666554 477
Q ss_pred HHHHHHHHHHHH-Hhhceec
Q 011702 435 KYKRLKENLKAV-RRHFELN 453 (479)
Q Consensus 435 ~i~~mq~~l~~v-~~~f~~~ 453 (479)
.+.+|.++.++. .++|.|.
T Consensus 371 ~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 371 LRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 888899888765 4888875
No 32
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=95.72 E-value=0.08 Score=55.30 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=68.9
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCC-CCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEE-EEcCCChhh
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGY-EVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSI-QVDVSEIPR 423 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~-~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV-~v~e~di~~ 423 (479)
.+.+.+..+ ..+..+.|+.|..|++|..+ +....-++|||++| +|||.++.- ...|++.=..-.. .++..+..+
T Consensus 258 ~v~~~G~~~-~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~g--g~~Eiv~~~~~G~~l~~~~d~~~ 333 (380)
T PRK15484 258 RCIMLGGQP-PEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKG--GITEFVLEGITGYHLAEPMTSDS 333 (380)
T ss_pred cEEEeCCCC-HHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCC--CcHhhcccCCceEEEeCCCCHHH
Confidence 344444332 24677889999999999875 66667899999999 689998852 2334442223333 456667766
Q ss_pred HHHHHhc-CCHHHHHHHHHHHHH-HHhhceecC
Q 011702 424 LKEVLMA-VPEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 424 L~~iL~s-Is~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
+.+.|.. +.+.+..+|.++.++ +.++|.|..
T Consensus 334 la~~I~~ll~d~~~~~~~~~ar~~~~~~fsw~~ 366 (380)
T PRK15484 334 IISDINRTLADPELTQIAEQAKDFVFSKYSWEG 366 (380)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHH
Confidence 6555544 344445778777774 678898864
No 33
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=95.71 E-value=0.055 Score=53.07 Aligned_cols=94 Identities=12% Similarity=0.149 Sum_probs=66.2
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCC-HHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVP-EEK 435 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs-~~~ 435 (479)
.+..+.+.+|.++++|...+..+..++||+++|| |||.++.- ...+++.-....+.+...+..++.+.|..+- +.+
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~--~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVG--GIPEIITDGENGLLVPPGDPEALAEAILRLLADPW 346 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCC--ChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcH
Confidence 4678999999999999888777889999999999 67777642 2334455455567788888877666665542 222
Q ss_pred HHHHHHHHHHHHhhceec
Q 011702 436 YKRLKENLKAVRRHFELN 453 (479)
Q Consensus 436 i~~mq~~l~~v~~~f~~~ 453 (479)
....+++...+.++|.|.
T Consensus 347 ~~~~~~~~~~~~~~~s~~ 364 (377)
T cd03798 347 LRLGRAARRRVAERFSWE 364 (377)
T ss_pred HHHhHHHHHHHHHHhhHH
Confidence 244455555678888775
No 34
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=95.68 E-value=0.11 Score=53.25 Aligned_cols=105 Identities=13% Similarity=0.154 Sum_probs=70.9
Q ss_pred CCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhh
Q 011702 344 DKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPR 423 (479)
Q Consensus 344 d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~ 423 (479)
++.|.+.+..+ .....+.|+.+.++++|+..+....-++|||++|| |||.+|.-- -.+.+.-..-.+.++. +..+
T Consensus 279 ~~~V~f~g~~~-~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~-PvI~s~~~~--~~e~i~~~~~g~~~~~-~~~~ 353 (392)
T cd03805 279 EDQVIFLPSIS-DSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGK-PVIACNSGG--PLETVVDGETGFLCEP-TPEE 353 (392)
T ss_pred CceEEEeCCCC-hHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCC-CEEEECCCC--cHHHhccCCceEEeCC-CHHH
Confidence 34577776654 34567889999999999888777778999999995 777777421 2244433334455554 6666
Q ss_pred HHHHHhcC--CHHHHHHHHHHHHH-HHhhceec
Q 011702 424 LKEVLMAV--PEEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 424 L~~iL~sI--s~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
+.+.+..+ .++...+|+++.++ +.+.|.|.
T Consensus 354 ~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 354 FAEAMLKLANDPDLADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHhcCHH
Confidence 55555443 35668888888776 57888775
No 35
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=95.51 E-value=0.047 Score=55.47 Aligned_cols=82 Identities=13% Similarity=0.125 Sum_probs=57.3
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL 424 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L 424 (479)
+.|.+.+..+ ..+..+.|+.+..+++|.- +..+.-++|||++|| |||.++.-- ..+++.=....+.++..+...+
T Consensus 242 ~~V~~~g~~~-~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-Pvi~~~~~~--~~e~i~~~~~G~~~~~~~~~~l 316 (351)
T cd03804 242 PNVTFLGRVS-DEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-PVIAYGKGG--ALETVIDGVTGILFEEQTVESL 316 (351)
T ss_pred CCEEEecCCC-HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-CEEEeCCCC--CcceeeCCCCEEEeCCCCHHHH
Confidence 4566666553 2468889999999999876 555667899999998 999887422 2344433356777887787776
Q ss_pred HHHHhcC
Q 011702 425 KEVLMAV 431 (479)
Q Consensus 425 ~~iL~sI 431 (479)
.+.|..+
T Consensus 317 a~~i~~l 323 (351)
T cd03804 317 AAAVERF 323 (351)
T ss_pred HHHHHHH
Confidence 6655554
No 36
>PRK10307 putative glycosyl transferase; Provisional
Probab=95.22 E-value=0.074 Score=55.66 Aligned_cols=129 Identities=9% Similarity=0.140 Sum_probs=83.7
Q ss_pred eEEEecccccchhhHHHHHhhccCC-CCeEEecccCCChhHHhhcccceEEEeeCCCCC----CCchHHHHHhcCcEeEE
Q 011702 320 YLAFFAGGLHGTIRSILLQHWKGHD-KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEV----ASPRIVESIYAQCVPVI 394 (479)
Q Consensus 320 ~L~fFaG~~~g~iR~~L~~~~~~~d-~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~----~s~Rl~EAi~~GCIPVi 394 (479)
+-+.+.|. |..++.|.+..+..+ ..+.+.+..+ ..+..+.|+.+..+++|.=.+. ....++|||++|| |||
T Consensus 260 ~~l~ivG~--g~~~~~l~~~~~~~~l~~v~f~G~~~-~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~-PVi 335 (412)
T PRK10307 260 LIFVICGQ--GGGKARLEKMAQCRGLPNVHFLPLQP-YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGR-NVV 335 (412)
T ss_pred eEEEEECC--ChhHHHHHHHHHHcCCCceEEeCCCC-HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCC-CEE
Confidence 44455552 334444433222111 2455555443 3467889999999998864332 2345799999995 888
Q ss_pred ecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHH-HHhhceecC
Q 011702 395 LSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 395 isd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
.++.--....+++. .-.+.++..|+.++.+.|..+ .++...+|.++.+. +.++|.|..
T Consensus 336 ~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 336 ATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred EEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 88742223345666 467788888988888888765 46778899998886 667898864
No 37
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.15 E-value=0.11 Score=55.85 Aligned_cols=92 Identities=14% Similarity=0.179 Sum_probs=63.9
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCC-CCC-----cEEEEEcCCChhhHHHHHhcC
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVL-RWE-----AFSIQVDVSEIPRLKEVLMAV 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvL-DW~-----~fsV~v~e~di~~L~~iL~sI 431 (479)
...+.++.+.++++|+-+++...-..|||++||.||+ ++.- ...|++ |.. .-.+.++..+..+|.+.|..+
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~g--g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~ 434 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTG--GLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRA 434 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCC--CccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 4567899999999999998888889999999996654 4432 233333 321 567778888887766655443
Q ss_pred ------CHHHHHHHHHHHHHHHhhceecC
Q 011702 432 ------PEEKYKRLKENLKAVRRHFELNH 454 (479)
Q Consensus 432 ------s~~~i~~mq~~l~~v~~~f~~~~ 454 (479)
.++...+|.++.. .+.|.|..
T Consensus 435 l~~~~~~~~~~~~~~~~~~--~~~fsw~~ 461 (473)
T TIGR02095 435 LRLYRQDPSLWEALQKNAM--SQDFSWDK 461 (473)
T ss_pred HHHHhcCHHHHHHHHHHHh--ccCCCcHH
Confidence 4566777776653 46777764
No 38
>PRK14098 glycogen synthase; Provisional
Probab=95.14 E-value=0.068 Score=58.20 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=65.9
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCC-C---CCcEEEEEcCCChhhHHHHHhcC--
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVL-R---WEAFSIQVDVSEIPRLKEVLMAV-- 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvL-D---W~~fsV~v~e~di~~L~~iL~sI-- 431 (479)
...+.++.|.+++.|+-+++...-..|||++||+||+...+- ..|.+ | -..-.+.++..+...|.+.|..+
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG---l~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG---IVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALA 450 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC---CceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHH
Confidence 456789999999999999988889999999999999865431 11111 2 13446677888887776665532
Q ss_pred ---CHHHHHHHHHHHHHHHhhceecCCCCC
Q 011702 432 ---PEEKYKRLKENLKAVRRHFELNHPAKR 458 (479)
Q Consensus 432 ---s~~~i~~mq~~l~~v~~~f~~~~p~~~ 458 (479)
.++++.+|+++. +.+.|.|....++
T Consensus 451 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~ 478 (489)
T PRK14098 451 LYHDEERWEELVLEA--MERDFSWKNSAEE 478 (489)
T ss_pred HHcCHHHHHHHHHHH--hcCCCChHHHHHH
Confidence 356666666544 4577888654333
No 39
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=95.09 E-value=0.054 Score=55.58 Aligned_cols=89 Identities=21% Similarity=0.332 Sum_probs=65.8
Q ss_pred hhHHhhcccceEEEeeCCCC-----------CCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYE-----------VASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~-----------~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+..+.|.. .|+|++.+++ ...-.++++|++|+ |||.++.-.+ .+++.=....+.++ ++.++.
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-PVI~~~~~~~--~~~V~~~~~G~~v~--~~~el~ 291 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-PVIVWSKAAI--ADFIVENGLGFVVD--SLEELP 291 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-CEEECCCccH--HHHHHhCCceEEeC--CHHHHH
Confidence 345566665 8999887651 12335888899886 9999876333 24454456677776 677899
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHhhce
Q 011702 426 EVLMAVPEEKYKRLKENLKAVRRHFE 451 (479)
Q Consensus 426 ~iL~sIs~~~i~~mq~~l~~v~~~f~ 451 (479)
+.|..++++++.+|+++++++.+.+.
T Consensus 292 ~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 292 EIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988774
No 40
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=95.07 E-value=0.19 Score=53.43 Aligned_cols=130 Identities=14% Similarity=0.095 Sum_probs=79.7
Q ss_pred CeEEEecccccc----hhhHHHHHhhccC--CCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEe
Q 011702 319 PYLAFFAGGLHG----TIRSILLQHWKGH--DKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVP 392 (479)
Q Consensus 319 ~~L~fFaG~~~g----~iR~~L~~~~~~~--d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIP 392 (479)
++-+.++|+... ..+..|.+..++. .+.|.+.+..+ ..+..+.|+.|..++.|.=.+..+.-++|||++||.|
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~-~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pv 351 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAP-FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIP 351 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCC-HHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcE
Confidence 466677776421 2233343332221 23566665543 3578899999999999887777788899999999966
Q ss_pred EEecCCccCCCCCCCC---CCcEEEEEcCCChhhHHHHHhc---CCHHHHHHHHHHHHHHHhhceec
Q 011702 393 VILSQNYVLPFSDVLR---WEAFSIQVDVSEIPRLKEVLMA---VPEEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 393 Viisd~~~LPF~dvLD---W~~fsV~v~e~di~~L~~iL~s---Is~~~i~~mq~~l~~v~~~f~~~ 453 (479)
|. ++. --|..+++. =..-.+.+ .+..++.+.+.. .++++...|+++.+++.++|.|.
T Consensus 352 Ia-~~~-ggp~~~iv~~~~~g~~G~l~--~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 352 LA-HAS-GGPLLDIVVPWDGGPTGFLA--STAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred EE-EcC-CCCchheeeccCCCCceEEe--CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 64 442 135566653 22233333 255544443333 35666667888888888888764
No 41
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.04 E-value=0.14 Score=55.12 Aligned_cols=93 Identities=13% Similarity=0.188 Sum_probs=64.0
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCC-CCC-----cEEEEEcCCChhhHHHHHhcC
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVL-RWE-----AFSIQVDVSEIPRLKEVLMAV 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvL-DW~-----~fsV~v~e~di~~L~~iL~sI 431 (479)
.....++.|.+++.|+=+++...-..|||++||+||+-..+ -..|.+ |.. .-.+.++..+...|.+.|..+
T Consensus 349 ~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g---G~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~ 425 (466)
T PRK00654 349 LAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG---GLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRA 425 (466)
T ss_pred HHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC---CccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 34578899999999998998888999999999988774322 122322 321 457778888887776665543
Q ss_pred -----CHHHHHHHHHHHHHHHhhceecCC
Q 011702 432 -----PEEKYKRLKENLKAVRRHFELNHP 455 (479)
Q Consensus 432 -----s~~~i~~mq~~l~~v~~~f~~~~p 455 (479)
.++...+|.++.. .+.|.|...
T Consensus 426 l~~~~~~~~~~~~~~~~~--~~~fsw~~~ 452 (466)
T PRK00654 426 LELYRQPPLWRALQRQAM--AQDFSWDKS 452 (466)
T ss_pred HHHhcCHHHHHHHHHHHh--ccCCChHHH
Confidence 3455666766553 467877643
No 42
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.03 E-value=0.2 Score=50.22 Aligned_cols=128 Identities=17% Similarity=0.214 Sum_probs=75.3
Q ss_pred CeEEEecccc--cchhhHHHHHhhccCCCCeEEecccCCChhHHhhcccceEEEeeCCC-CCCCchHHHHHhcCcEeEEe
Q 011702 319 PYLAFFAGGL--HGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGY-EVASPRIVESIYAQCVPVIL 395 (479)
Q Consensus 319 ~~L~fFaG~~--~g~iR~~L~~~~~~~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~-~~~s~Rl~EAi~~GCIPVii 395 (479)
++-+.+.|.. .+.....+.+.. +..+.+.+.+..+. .+..+.+..+..++.|.-. +....-++|||++|| |||.
T Consensus 221 ~~~l~ivG~~~~~~~~~~~~~~~~-~~~~~V~~~g~~~~-~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~ 297 (363)
T cd04955 221 GKKLVIVGNADHNTPYGKLLKEKA-AADPRIIFVGPIYD-QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLA 297 (363)
T ss_pred CceEEEEcCCCCcchHHHHHHHHh-CCCCcEEEccccCh-HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEE
Confidence 3445566643 233344333222 22345766665543 4567788888888888766 656677999999999 7887
Q ss_pred cCCccCCCCCCCCCCcEEEEEcCCC-hhhHHHHHhcCCHHHHHHHHHHHHHH-HhhceecC
Q 011702 396 SQNYVLPFSDVLRWEAFSIQVDVSE-IPRLKEVLMAVPEEKYKRLKENLKAV-RRHFELNH 454 (479)
Q Consensus 396 sd~~~LPF~dvLDW~~fsV~v~e~d-i~~L~~iL~sIs~~~i~~mq~~l~~v-~~~f~~~~ 454 (479)
++.- +..+++.- -...++..+ +.+....|.. .++.+.+|.++.++. .++|.|..
T Consensus 298 s~~~--~~~e~~~~--~g~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 298 SDNP--FNREVLGD--KAIYFKVGDDLASLLEELEA-DPEEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred ecCC--ccceeecC--CeeEecCchHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHH
Confidence 7642 34455543 233445555 4333333333 236777888877754 55687753
No 43
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=94.68 E-value=0.21 Score=51.05 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=69.0
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCC-ccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQN-YVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEE 434 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~-~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~ 434 (479)
+..+.++.+..++.|.-.+....-+.|||++|| |||.+|- +.. .+++.=..-.+.++..+..++.+.|..+ .++
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~--~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~ 347 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP--SEIIEDGENGYLVPKGDIEALAEAIIELLNDPK 347 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc--HHHcccCCCceEeCCCcHHHHHHHHHHHHcCHH
Confidence 567789999999999877666778999999999 7887662 221 2334334566777878877766666554 467
Q ss_pred HHHHHHHHHHHHHhhceec
Q 011702 435 KYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 435 ~i~~mq~~l~~v~~~f~~~ 453 (479)
.+.+|+++.++..+.|.|.
T Consensus 348 ~~~~~~~~a~~~~~~~s~~ 366 (372)
T cd04949 348 LLQKFSEAAYENAERYSEE 366 (372)
T ss_pred HHHHHHHHHHHHHHHhhHH
Confidence 8999999998888888764
No 44
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=94.54 E-value=0.25 Score=49.00 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=61.3
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCC-CCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhh
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSG-YEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPR 423 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G-~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~ 423 (479)
+.+.+.+..+ ..+..+.|+.+.+++.|.- .+..+..++|||++|| |||.+|.-- ..++++=..-.+.++. +.+
T Consensus 224 ~~v~~~G~~~-~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~--~~e~i~~~~~g~l~~~--~~~ 297 (335)
T cd03802 224 PDIEYLGEVG-GAEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGA--VPEVVEDGVTGFLVDS--VEE 297 (335)
T ss_pred CcEEEeCCCC-HHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCC--chhheeCCCcEEEeCC--HHH
Confidence 3455555543 2356788999999999975 3556678999999998 999998632 3355543323344443 666
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHhhceec
Q 011702 424 LKEVLMAVPEEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 424 L~~iL~sIs~~~i~~mq~~l~~v~~~f~~~ 453 (479)
+.+.|..+......+. -+.+.++|.|.
T Consensus 298 l~~~l~~l~~~~~~~~---~~~~~~~~s~~ 324 (335)
T cd03802 298 LAAAVARADRLDRAAC---RRRAERRFSAA 324 (335)
T ss_pred HHHHHHHHhccHHHHH---HHHHHHhCCHH
Confidence 6666665422111121 22355777664
No 45
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=94.40 E-value=0.18 Score=52.71 Aligned_cols=107 Identities=14% Similarity=0.124 Sum_probs=66.9
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+.+.+..+ ..+..+.++.+..++.|.-.+.....++|||++|| |||.++.-- ..|+++=. ..+.++. +..++.
T Consensus 251 ~v~~~G~~~-~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg--~~e~i~~~-~~~~~~~-~~~~l~ 324 (398)
T cd03796 251 RVELLGAVP-HERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGG--IPEVLPPD-MILLAEP-DVESIV 324 (398)
T ss_pred eEEEeCCCC-HHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCC--chhheeCC-ceeecCC-CHHHHH
Confidence 455555543 35788899999999999876666778999999999 677776532 33555422 2344443 555554
Q ss_pred HHHhcC---CHHHHHHHHHHHHHHHhhceecCCCCC
Q 011702 426 EVLMAV---PEEKYKRLKENLKAVRRHFELNHPAKR 458 (479)
Q Consensus 426 ~iL~sI---s~~~i~~mq~~l~~v~~~f~~~~p~~~ 458 (479)
+.|..+ +.++...+++...++.++|.|..-.+.
T Consensus 325 ~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 360 (398)
T cd03796 325 RKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKR 360 (398)
T ss_pred HHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHH
Confidence 444332 222323345555678999998764443
No 46
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.35 E-value=0.21 Score=53.37 Aligned_cols=92 Identities=15% Similarity=0.237 Sum_probs=62.1
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCC-CCC-----cEEEEEcCCChhhHHHHHhcC
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVL-RWE-----AFSIQVDVSEIPRLKEVLMAV 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvL-DW~-----~fsV~v~e~di~~L~~iL~sI 431 (479)
...+.++.+.+.+.|+-+++...-.+|||++||.||.-..+ ...|.+ |.. .-.+.++..+...|.+.|..+
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g---g~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~ 439 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG---GLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRA 439 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC---CccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHH
Confidence 45678899999999998888888899999999988654322 223332 332 156777888877766655543
Q ss_pred -----CHHHHHHHHHHHHHHHhhceecC
Q 011702 432 -----PEEKYKRLKENLKAVRRHFELNH 454 (479)
Q Consensus 432 -----s~~~i~~mq~~l~~v~~~f~~~~ 454 (479)
.+++..+|.++.. .+.|.|..
T Consensus 440 l~~~~~~~~~~~~~~~~~--~~~fsw~~ 465 (476)
T cd03791 440 LALYRDPEAWRKLQRNAM--AQDFSWDR 465 (476)
T ss_pred HHHHcCHHHHHHHHHHHh--ccCCChHH
Confidence 2566677766653 35576653
No 47
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=94.24 E-value=0.24 Score=51.00 Aligned_cols=105 Identities=21% Similarity=0.207 Sum_probs=70.2
Q ss_pred CCeEEecccC-CChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCC-h-
Q 011702 345 KDLIVFEYLP-KDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSE-I- 421 (479)
Q Consensus 345 ~dv~v~e~~~-~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~d-i- 421 (479)
+++.+.+..+ ...+..+.++.+..++.|+..+....-++|||++|+ |||.++.-.+ .+++.-....+.++..+ +
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~-Pvv~s~~~~~--~~~i~~~~~g~~~~~~~~~a 328 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK-PVIAGPVGGI--PLQIEDGETGFLVDTVEEAA 328 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC-CEEEcCCCCc--hhhcccCCceEEeCCcHHHH
Confidence 4566655432 345677889999999999988877889999999994 9999885333 34443334444444322 1
Q ss_pred hhHHHHHhcCCHHHHHHHHHHHHH-HHhhceecC
Q 011702 422 PRLKEVLMAVPEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 422 ~~L~~iL~sIs~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
..|...|. +++...+|.++.++ +.++|.|..
T Consensus 329 ~~i~~ll~--~~~~~~~~~~~a~~~~~~~~s~~~ 360 (372)
T cd03792 329 VRILYLLR--DPELRRKMGANAREHVRENFLITR 360 (372)
T ss_pred HHHHHHHc--CHHHHHHHHHHHHHHHHHHcCHHH
Confidence 12333333 46778899888887 567898864
No 48
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=94.21 E-value=0.34 Score=51.11 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=66.6
Q ss_pred CeEEecccCCChhHHhhccc--ceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcC-CChh
Q 011702 346 DLIVFEYLPKDQDYYSFMLK--SKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDV-SEIP 422 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~--SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e-~di~ 422 (479)
.+.+.+..+. .+..+.++. +..++.|...+...--++|||++|| |||.+|-- ...++++=..-.+.++. .+..
T Consensus 290 ~V~f~G~v~~-~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vg--g~~e~i~~~~~G~l~~~~~~~~ 365 (407)
T cd04946 290 SVNFTGELSN-SEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVG--GTPEIVDNGGNGLLLSKDPTPN 365 (407)
T ss_pred eEEEecCCCh-HHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCC--CcHHHhcCCCcEEEeCCCCCHH
Confidence 4555555442 345566654 3344446655556677999999996 99998842 23455544444566654 4666
Q ss_pred hHHHHHhcC--CHHHHHHHHHHHHHH-Hhhceec
Q 011702 423 RLKEVLMAV--PEEKYKRLKENLKAV-RRHFELN 453 (479)
Q Consensus 423 ~L~~iL~sI--s~~~i~~mq~~l~~v-~~~f~~~ 453 (479)
++.+.|..+ ++++..+|+++.++. .++|.+.
T Consensus 366 ~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 366 ELVSSLSKFIDNEEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 666655554 578899999988864 5777664
No 49
>PRK14099 glycogen synthase; Provisional
Probab=94.19 E-value=0.36 Score=52.50 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=66.9
Q ss_pred hhHHhhc-ccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCC-CCCCC--------cEEEEEcCCChhhHHH
Q 011702 357 QDYYSFM-LKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSD-VLRWE--------AFSIQVDVSEIPRLKE 426 (479)
Q Consensus 357 ~~y~~~m-~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~d-vLDW~--------~fsV~v~e~di~~L~~ 426 (479)
.+....+ +.|.+.+.|+=+++...-..|||++||+||+ ++-=- ..| +.|.. .-.+.++..|...|.+
T Consensus 360 ~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GG--l~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ 436 (485)
T PRK14099 360 EALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGG--LADTVVDANEMAIATGVATGVQFSPVTADALAA 436 (485)
T ss_pred HHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCC--ccceeecccccccccCCCceEEeCCCCHHHHHH
Confidence 3455555 5689999999999999999999999999988 44211 122 23442 3577788888887776
Q ss_pred HHhc----C-CHHHHHHHHHHHHHHHhhceecCCCCC
Q 011702 427 VLMA----V-PEEKYKRLKENLKAVRRHFELNHPAKR 458 (479)
Q Consensus 427 iL~s----I-s~~~i~~mq~~l~~v~~~f~~~~p~~~ 458 (479)
.|.. + .++...+|+++.+ .+.|.|....++
T Consensus 437 ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~ 471 (485)
T PRK14099 437 ALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQH 471 (485)
T ss_pred HHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHH
Confidence 6653 2 4677788888764 477888754333
No 50
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=94.18 E-value=0.19 Score=51.72 Aligned_cols=124 Identities=12% Similarity=0.077 Sum_probs=75.1
Q ss_pred CeEEEecccccchhhHHHHHhhc--cCCCCeEEecccCCC-hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEe
Q 011702 319 PYLAFFAGGLHGTIRSILLQHWK--GHDKDLIVFEYLPKD-QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVIL 395 (479)
Q Consensus 319 ~~L~fFaG~~~g~iR~~L~~~~~--~~d~dv~v~e~~~~~-~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPVii 395 (479)
++-+.+.|. |..+..+.+.-+ +-++.+.+.+..... ..+.+.++.+..++.|+.++....-++|||++| +|||.
T Consensus 210 ~~~l~ivG~--g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~ 286 (359)
T PRK09922 210 EWQLHIIGD--GSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCIS 286 (359)
T ss_pred CeEEEEEeC--CccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEE
Confidence 345556663 333444433322 223456666654333 345677888999999988877788999999999 58888
Q ss_pred cCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCCHH----HHHHHHHHHHHH
Q 011702 396 SQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEE----KYKRLKENLKAV 446 (479)
Q Consensus 396 sd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs~~----~i~~mq~~l~~v 446 (479)
+|..-- ..+++.=..-.+.++..|+.++.+.+..+-.. .-..+++++++.
T Consensus 287 s~~~~g-~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 340 (359)
T PRK09922 287 SDCMSG-PRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVKYQHDAIPNSIERF 340 (359)
T ss_pred eCCCCC-hHHHccCCCceEEECCCCHHHHHHHHHHHHhCcccCCHHHHHHHHHHh
Confidence 872211 22444334456677888988877666665221 234445554443
No 51
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.02 E-value=0.44 Score=47.57 Aligned_cols=105 Identities=16% Similarity=0.167 Sum_probs=71.9
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCC--CCCCCchHHHHHhcCcEeEEecCCccCCCCCCC-CCCcEEEEEcCCCh
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSG--YEVASPRIVESIYAQCVPVILSQNYVLPFSDVL-RWEAFSIQVDVSEI 421 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G--~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvL-DW~~fsV~v~e~di 421 (479)
+.|.+.+..+ ..+..+.++.+..|++|.- .+.....+.|||.+|| |||.+|.-.. .+.+ +.......++..|.
T Consensus 244 ~~V~~~g~v~-~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~-Pvi~~~~~~~--~~~i~~~~~~g~~~~~~d~ 319 (357)
T cd03795 244 DRVRFLGRLD-DEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGK-PVISTEIGTG--GSYVNLHGVTGLVVPPGDP 319 (357)
T ss_pred ceEEEcCCCC-HHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCC-CEEecCCCCc--hhHHhhCCCceEEeCCCCH
Confidence 3466655544 3467889999999999863 2444567999999986 7777763222 2222 23567777888888
Q ss_pred hhHHHHHhcC--CHHHHHHHHHHHHH-HHhhceec
Q 011702 422 PRLKEVLMAV--PEEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 422 ~~L~~iL~sI--s~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
.++.+.+..+ .++++.+|.++.+. +.++|.|.
T Consensus 320 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 320 AALAEAIRRLLEDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchH
Confidence 7776666654 57788899998887 46777663
No 52
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=93.97 E-value=0.31 Score=51.56 Aligned_cols=120 Identities=16% Similarity=0.277 Sum_probs=73.3
Q ss_pred CeEEEecccccchhhHHHHHhhccCC-CCeEEec-ccCCChhHHhhcccceEEEeeC----CCCCCCchHHHHHhcCcEe
Q 011702 319 PYLAFFAGGLHGTIRSILLQHWKGHD-KDLIVFE-YLPKDQDYYSFMLKSKFCLCPS----GYEVASPRIVESIYAQCVP 392 (479)
Q Consensus 319 ~~L~fFaG~~~g~iR~~L~~~~~~~d-~dv~v~e-~~~~~~~y~~~m~~SkFCL~P~----G~~~~s~Rl~EAi~~GCIP 392 (479)
++.+.+.|. |..+..|.+..+..+ .++.... ..+ ..++.+.|..|..+++|. |.+ ...-++|||++|+ |
T Consensus 269 ~i~l~ivG~--G~~~~~l~~~~~~~~l~~~~~~~g~~~-~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama~G~-P 343 (415)
T cd03816 269 KLLCIITGK--GPLKEKYLERIKELKLKKVTIRTPWLS-AEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFGCGL-P 343 (415)
T ss_pred CEEEEEEec--CccHHHHHHHHHHcCCCcEEEEcCcCC-HHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHHcCC-C
Confidence 366777774 455666555444332 2444442 332 457888999999987643 332 3567999999999 9
Q ss_pred EEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC-----CHHHHHHHHHHHHHHH
Q 011702 393 VILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV-----PEEKYKRLKENLKAVR 447 (479)
Q Consensus 393 Viisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI-----s~~~i~~mq~~l~~v~ 447 (479)
||.++.- ...|++.=..-.+.++ +..+|.+.|..+ ++++..+|.++.++..
T Consensus 344 VI~s~~~--~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 344 VCALDFK--CIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred EEEeCCC--CHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 9998753 2234553233344442 666555544433 2678888988887765
No 53
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.94 E-value=0.17 Score=41.61 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=49.3
Q ss_pred EeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEc-CCChhhHHHHHhcCCHHHHHHHHHHHHH-HH
Q 011702 370 LCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVD-VSEIPRLKEVLMAVPEEKYKRLKENLKA-VR 447 (479)
Q Consensus 370 L~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~-e~di~~L~~iL~sIs~~~i~~mq~~l~~-v~ 447 (479)
|-|.-.+-.+.|++|++++||+. |..+. ..+.+.+++..-.+.+. .+++.+....|.+ .+++..+|.++.++ |.
T Consensus 3 Ln~~~~~~~~~r~~E~~a~G~~v-i~~~~--~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 3 LNPSRSDGPNMRIFEAMACGTPV-ISDDS--PGLREIFEDGEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARERVL 78 (92)
T ss_pred eeCCCCCCCchHHHHHHHCCCeE-EECCh--HHHHHHcCCCCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 44433333578999999999954 44333 22334466665666664 3444443333333 68888889888864 66
Q ss_pred hhceec
Q 011702 448 RHFELN 453 (479)
Q Consensus 448 ~~f~~~ 453 (479)
+++.|.
T Consensus 79 ~~~t~~ 84 (92)
T PF13524_consen 79 KRHTWE 84 (92)
T ss_pred HhCCHH
Confidence 688775
No 54
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.78 E-value=0.35 Score=52.17 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=68.1
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCC------CcEEEEEcCCChhhHHHHHhc
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRW------EAFSIQVDVSEIPRLKEVLMA 430 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW------~~fsV~v~e~di~~L~~iL~s 430 (479)
.+..+.|..+..++.|.-.+....-++|||++|| |||.+|.- ...++++= ....+.++..|..++.+.+..
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g--~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ 438 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVG--SCRELIEGADDEALGPAGEVVPPADPEALARAILR 438 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCC--ChHHHhcCCcccccCCceEEECCCCHHHHHHHHHH
Confidence 4567888999999998866656678999999999 88888742 22333322 346788888888877666665
Q ss_pred C--CHHHHHHHHHHHHH-HHhhceec
Q 011702 431 V--PEEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 431 I--s~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
+ .++...+|.++.++ +.+.|.|.
T Consensus 439 ll~~~~~~~~~~~~a~~~v~~~~s~~ 464 (475)
T cd03813 439 LLKDPELRRAMGEAGRKRVERYYTLE 464 (475)
T ss_pred HhcCHHHHHHHHHHHHHHHHHhCCHH
Confidence 4 47788889888875 66667664
No 55
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=93.44 E-value=0.15 Score=54.24 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=66.0
Q ss_pred hHHhhcccc----eEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--
Q 011702 358 DYYSFMLKS----KFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV-- 431 (479)
Q Consensus 358 ~y~~~m~~S----kFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI-- 431 (479)
+..+.++.+ ..++.|+-++....-+.|||++|| |||.++.= ...|+++=..-.+.++..|...|.+.+..+
T Consensus 329 ~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~g--g~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~ 405 (439)
T TIGR02472 329 DVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDG--GPRDIIANCRNGLLVDVLDLEAIASALEDALS 405 (439)
T ss_pred HHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCC--CcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh
Confidence 344555544 555667766766778999999999 99999852 344666545567788888888776655543
Q ss_pred CHHHHHHHHHHHHH-HHhhceecC
Q 011702 432 PEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 432 s~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
.+++..+|.++.++ +.++|.|..
T Consensus 406 ~~~~~~~~~~~a~~~~~~~fsw~~ 429 (439)
T TIGR02472 406 DSSQWQLWSRNGIEGVRRHYSWDA 429 (439)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHH
Confidence 46667778777764 778898864
No 56
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=93.07 E-value=0.42 Score=49.88 Aligned_cols=91 Identities=12% Similarity=0.244 Sum_probs=61.1
Q ss_pred hHHhhcccceEEEeeC--CCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 011702 358 DYYSFMLKSKFCLCPS--GYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PE 433 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~--G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~ 433 (479)
+....++.+..+++|. |.+ ...-++|||++|| |||.++.- .+.+..=..-.+.++ .+..++.+.+..+ .+
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG-~~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARG-IQNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLANP 363 (397)
T ss_pred CHHHHHHhCCEEEecccccCC-cccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHcCH
Confidence 4567888999999986 333 3457999999998 99998742 122211123345566 6777666555543 46
Q ss_pred HHHHHHHHHHHH-HHhhceecC
Q 011702 434 EKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 434 ~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
+...+|.++.++ +.++|.|..
T Consensus 364 ~~~~~~~~~ar~~v~~~fsw~~ 385 (397)
T TIGR03087 364 AEREELGQAARRRVLQHYHWPR 385 (397)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 667888888876 568898864
No 57
>PHA01633 putative glycosyl transferase group 1
Probab=92.85 E-value=0.21 Score=51.99 Aligned_cols=94 Identities=17% Similarity=0.338 Sum_probs=61.2
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCC------------------cEEEEEcC
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWE------------------AFSIQVDV 418 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~------------------~fsV~v~e 418 (479)
.+..+.++.|.+.+.|+-.+....-+.|||++|| |||.+|- -|..|+.++. .....++.
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~--~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~ 291 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM--PPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHK 291 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC--CCceeecCCccceeeCCCCHHHhcCcccCceeeecC
Confidence 3567889999999999988888889999999999 9999875 2444444431 12334555
Q ss_pred CChhhHHHHHhcC-CHHHHHHHHHHHHHHHhhceec
Q 011702 419 SEIPRLKEVLMAV-PEEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 419 ~di~~L~~iL~sI-s~~~i~~mq~~l~~v~~~f~~~ 453 (479)
.+..++.+.|... ...+-.++.++.+...+.|.|+
T Consensus 292 ~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f~~~ 327 (335)
T PHA01633 292 FQIEDMANAIILAFELQDREERSMKLKELAKKYDIR 327 (335)
T ss_pred CCHHHHHHHHHHHHhccChhhhhHHHHHHHHhcCHH
Confidence 6666655554432 1112223344556777777765
No 58
>PLN02949 transferase, transferring glycosyl groups
Probab=92.50 E-value=1.5 Score=47.62 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=66.7
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCC-CCC-cEEEEEcCCChh
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVL-RWE-AFSIQVDVSEIP 422 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvL-DW~-~fsV~v~e~di~ 422 (479)
+.+.+.+..+ ..+..+.|+++..++.|+-++....-++|||++||+||.-..+ =|-.|++ ++. .-.-.+. .++.
T Consensus 335 ~~V~f~g~v~-~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~-~~~~ 410 (463)
T PLN02949 335 GDVEFHKNVS-YRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLA-TTVE 410 (463)
T ss_pred CcEEEeCCCC-HHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccC-CCHH
Confidence 3466655443 2467788999999998887777778899999999877665432 1333332 221 0111111 3666
Q ss_pred hHHHHHhcC---CHHHHHHHHHHHHHHHhhceec
Q 011702 423 RLKEVLMAV---PEEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 423 ~L~~iL~sI---s~~~i~~mq~~l~~v~~~f~~~ 453 (479)
++.+.+..+ ++++..+|+++.++..+.|.|.
T Consensus 411 ~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e 444 (463)
T PLN02949 411 EYADAILEVLRMRETERLEIAAAARKRANRFSEQ 444 (463)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHH
Confidence 555555443 5677888999988776778774
No 59
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=92.50 E-value=0.47 Score=47.53 Aligned_cols=79 Identities=18% Similarity=0.115 Sum_probs=51.9
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+...+. ..+..+.++++.++++|.-.+..+.-++|||++|| |||.+|.- +..+++.= .........+..++.
T Consensus 250 ~v~~~g~---~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~-PvI~s~~~--~~~~~i~~-~~~~~~~~~~~~~~a 322 (358)
T cd03812 250 KVIFLGV---RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGL-PCILSDTI--TKEVDLTD-LVKFLSLDESPEIWA 322 (358)
T ss_pred cEEEecc---cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCC-CEEEEcCC--chhhhhcc-CccEEeCCCCHHHHH
Confidence 4544443 34567889999999999988878889999999999 55666642 22333322 334445555556666
Q ss_pred HHHhcC
Q 011702 426 EVLMAV 431 (479)
Q Consensus 426 ~iL~sI 431 (479)
+.+..+
T Consensus 323 ~~i~~l 328 (358)
T cd03812 323 EEILKL 328 (358)
T ss_pred HHHHHH
Confidence 655554
No 60
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=92.04 E-value=0.18 Score=55.96 Aligned_cols=109 Identities=13% Similarity=0.180 Sum_probs=70.9
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCC--CCCCC-CCCcEEEEEcC-------CChhhHHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLP--FSDVL-RWEAFSIQVDV-------SEIPRLKE 426 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LP--F~dvL-DW~~fsV~v~e-------~di~~L~~ 426 (479)
.+|.+.++.+.-++.|+-+++++.-..||+++|+ |||.++.--++ -.+++ +-....|.|.. ..+.+|.+
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~-PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI-PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcCC-CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 4799999999999999999999999999999995 99999864332 01333 33356677752 23344544
Q ss_pred HHhcC---CHHHHHHHHHHHHHHHhhceecCCCCCc-CHHHHHH
Q 011702 427 VLMAV---PEEKYKRLKENLKAVRRHFELNHPAKRF-DVFHMIL 466 (479)
Q Consensus 427 iL~sI---s~~~i~~mq~~l~~v~~~f~~~~p~~~~-Daf~mil 466 (479)
.|..+ +..+....+....++.+.|.|..-...| .|.++.|
T Consensus 545 ~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al 588 (590)
T cd03793 545 YMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLAL 588 (590)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 44443 3344444444444888999997533222 3444443
No 61
>PHA01630 putative group 1 glycosyl transferase
Probab=91.85 E-value=0.37 Score=49.86 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=59.2
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCC--------------------cEEEEE
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWE--------------------AFSIQV 416 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~--------------------~fsV~v 416 (479)
.+..+.++.+..++.|+-++....-++|||++|| |||.+|. -...|++.=. .+.+.+
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~--gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK--GAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC--CCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 4667889999999999877766778999999998 6777763 2233333212 223333
Q ss_pred cCCChh---hHHHHHhcCCHHHH-HHHHHHHHHHHhhceecC
Q 011702 417 DVSEIP---RLKEVLMAVPEEKY-KRLKENLKAVRRHFELNH 454 (479)
Q Consensus 417 ~e~di~---~L~~iL~sIs~~~i-~~mq~~l~~v~~~f~~~~ 454 (479)
+.++-. .+..+|...++++. ..+.++.+.+.+.|.|..
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ 319 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNA 319 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 433322 34455544333444 445556666888998863
No 62
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=91.41 E-value=1 Score=50.01 Aligned_cols=93 Identities=13% Similarity=0.116 Sum_probs=60.5
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHH---hcCC--
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVL---MAVP-- 432 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL---~sIs-- 432 (479)
+..+.|+.+..++.|+-++....-++|||++|| |||.++.-- ..++|.=..-.+.++..|...+.+.+ .++.
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG--~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~l 541 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGG--SAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNL 541 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCC--cHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHH
Confidence 566778999999999888888889999999999 999988532 23444445556677777754443322 2221
Q ss_pred HHHHHHHHHHHHH-HHhhceec
Q 011702 433 EEKYKRLKENLKA-VRRHFELN 453 (479)
Q Consensus 433 ~~~i~~mq~~l~~-v~~~f~~~ 453 (479)
.++..+|.++.+. +.++|.|.
T Consensus 542 l~~~~~mg~~ARe~V~e~FS~e 563 (578)
T PRK15490 542 WRSRTGICQQTQSFLQERFTVE 563 (578)
T ss_pred HHHHHHHHHHHHHHHHhhCCHH
Confidence 1223345445444 67788775
No 63
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=90.68 E-value=0.18 Score=43.79 Aligned_cols=77 Identities=18% Similarity=0.279 Sum_probs=45.6
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCC-CCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSG-YEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL 424 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G-~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L 424 (479)
.+.+.+.. .++.+.|+++..+++|.- .+..+..++|++.+|| |||.++. ++.+.+.-....+.+ ..+..++
T Consensus 54 ~v~~~g~~---~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-pvi~~~~---~~~~~~~~~~~~~~~-~~~~~~l 125 (135)
T PF13692_consen 54 NVRFHGFV---EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-PVIASDN---GAEGIVEEDGCGVLV-ANDPEEL 125 (135)
T ss_dssp TEEEE-S----HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH---HCHCHS---SEEEE--TT-HHHH
T ss_pred CEEEcCCH---HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-CEEECCc---chhhheeecCCeEEE-CCCHHHH
Confidence 56666554 378999999999999974 2345689999999999 5555555 445444335666667 7777776
Q ss_pred HHHHhc
Q 011702 425 KEVLMA 430 (479)
Q Consensus 425 ~~iL~s 430 (479)
.+.|..
T Consensus 126 ~~~i~~ 131 (135)
T PF13692_consen 126 AEAIER 131 (135)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 64
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=89.74 E-value=2.3 Score=44.84 Aligned_cols=146 Identities=16% Similarity=0.127 Sum_probs=87.8
Q ss_pred CCCCCccCCCCcccCceeccCCc---cCCCCCCCCCCCCCCCeEEEeccccc-chhhHHHHHhhccCCCCeEEecccCC-
Q 011702 281 NTSEGFNPQKDVTLPEIHLYGGY---VSPKLLSPPPFNAPRPYLAFFAGGLH-GTIRSILLQHWKGHDKDLIVFEYLPK- 355 (479)
Q Consensus 281 ~~s~~Frp~kDVsiP~~~~~~~~---~~~~~~~~~p~~~~R~~L~fFaG~~~-g~iR~~L~~~~~~~d~dv~v~e~~~~- 355 (479)
|++-+||-+-|+-.|.-...... ...+. .+.-..+++.++.+..... ..-|..+++.+... -.+.+++.|..
T Consensus 158 N~T~Tyr~dSd~~~pygy~~~~~~~~~~~p~--~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~ 234 (372)
T KOG2619|consen 158 NWTMTYRRDSDLFVPYGYLEKPEANPVLVPV--NSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRK 234 (372)
T ss_pred cceEEEeccCCCCCccceEeecccCceeccc--ccccccccceeeeeccccCcchHHHHHHHHHHhh-Cceeeccccccc
Confidence 45566888888888864322111 11111 1111245666677766553 35676666655544 45666766542
Q ss_pred ------ChhHHhhcccceEEEeeCC---CCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcC-CChhhHH
Q 011702 356 ------DQDYYSFMLKSKFCLCPSG---YEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDV-SEIPRLK 425 (479)
Q Consensus 356 ------~~~y~~~m~~SkFCL~P~G---~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e-~di~~L~ 425 (479)
...-.+.+.+=||=|.-.- ...-+.-|+-|+.+|.|||+++......| +. .+.-|.|+. ..+.+|.
T Consensus 235 ~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~f---vP-~~SfI~vdDF~s~~ela 310 (372)
T KOG2619|consen 235 NANRDPSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENF---VP-PDSFIHVDDFQSPQELA 310 (372)
T ss_pred cccCCCCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCcccccc---CC-CcceEehhhcCCHHHHH
Confidence 2356778888899988532 12336789999999999999998544333 33 444444432 3456788
Q ss_pred HHHhcCCH
Q 011702 426 EVLMAVPE 433 (479)
Q Consensus 426 ~iL~sIs~ 433 (479)
..|+.+..
T Consensus 311 ~ylk~L~~ 318 (372)
T KOG2619|consen 311 AYLKKLDK 318 (372)
T ss_pred HHHHHhhc
Confidence 88888853
No 65
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=89.39 E-value=2.5 Score=46.33 Aligned_cols=93 Identities=12% Similarity=0.083 Sum_probs=61.2
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCC-ccCCCCCCCCCCcEEEEEcC----C---C-hhhHHHHH
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQN-YVLPFSDVLRWEAFSIQVDV----S---E-IPRLKEVL 428 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~-~~LPF~dvLDW~~fsV~v~e----~---d-i~~L~~iL 428 (479)
+..+.++.+.-+++|+=.+..+.-++|||++|| |||.+|- +-. .++|.=..-.+.++. . + +..|.+.+
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~--~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I 461 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN--PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKI 461 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC--HHHccCCCCEEEEeCCccccchhHHHHHHHHHH
Confidence 456778888888888867777788999999998 7887772 222 233432333444441 2 2 44443332
Q ss_pred hc-CCHHHHHHHHHHHHHHHhhceec
Q 011702 429 MA-VPEEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 429 ~s-Is~~~i~~mq~~l~~v~~~f~~~ 453 (479)
.. +.+++..+|.++.++..+.|.|.
T Consensus 462 ~~ll~~~~~~~~~~~a~~~a~~fs~~ 487 (500)
T TIGR02918 462 VEYFNSNDIDAFHEYSYQIAEGFLTA 487 (500)
T ss_pred HHHhChHHHHHHHHHHHHHHHhcCHH
Confidence 22 24667899999999988888774
No 66
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=88.55 E-value=0.97 Score=53.50 Aligned_cols=93 Identities=13% Similarity=0.116 Sum_probs=68.2
Q ss_pred HHhhcccc----eEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 011702 359 YYSFMLKS----KFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--P 432 (479)
Q Consensus 359 y~~~m~~S----kFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s 432 (479)
..+.++.+ ..+++|+=++....-+.|||++|| |||.++. -...|++.-..-.+.|+..|...|.+.|..+ .
T Consensus 561 vp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-PVVASdv--GG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~D 637 (1050)
T TIGR02468 561 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PMVATKN--GGPVDIHRVLDNGLLVDPHDQQAIADALLKLVAD 637 (1050)
T ss_pred HHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC-CEEEeCC--CCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhC
Confidence 34455544 366668777777888999999996 9999984 2344566556678888998988777666554 4
Q ss_pred HHHHHHHHHHHHHHHhhceecC
Q 011702 433 EEKYKRLKENLKAVRRHFELNH 454 (479)
Q Consensus 433 ~~~i~~mq~~l~~v~~~f~~~~ 454 (479)
++...+|.++.++..+.|.|..
T Consensus 638 pelr~~m~~~gr~~v~~FSWe~ 659 (1050)
T TIGR02468 638 KQLWAECRQNGLKNIHLFSWPE 659 (1050)
T ss_pred HHHHHHHHHHHHHHHHHCCHHH
Confidence 6778899999887767898864
No 67
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=86.33 E-value=5.3 Score=41.91 Aligned_cols=128 Identities=15% Similarity=0.189 Sum_probs=76.4
Q ss_pred eEEEecccccch---hhHHHHHhhccC---CCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeE
Q 011702 320 YLAFFAGGLHGT---IRSILLQHWKGH---DKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPV 393 (479)
Q Consensus 320 ~L~fFaG~~~g~---iR~~L~~~~~~~---d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPV 393 (479)
+=+.++|++++. -|-.-++.|... +.+++..-..| -.+..+++.++.+.+.-.=.+-....++|+|++|-|||
T Consensus 306 iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~P-y~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi 384 (465)
T KOG1387|consen 306 IKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVP-YEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPI 384 (465)
T ss_pred ceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCC-HHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEE
Confidence 446788888764 343333333221 33454443332 23567899999999998877777788999999999998
Q ss_pred EecCCccCCCCC-CCCCCcEEE-EEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHHHhhc
Q 011702 394 ILSQNYVLPFSD-VLRWEAFSI-QVDVSEIPRLKEVLMAV--PEEKYKRLKENLKAVRRHF 450 (479)
Q Consensus 394 iisd~~~LPF~d-vLDW~~fsV-~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~v~~~f 450 (479)
.=..+ =|--| |++|+.=.. ++.+++..-...||+-+ +.++...||++-+.--.+|
T Consensus 385 ~h~Sg--GP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 385 VHNSG--GPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARF 443 (465)
T ss_pred EeCCC--CCceeeeeccCCccceeecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 75432 22222 355653333 33344433334444432 4566778888877655555
No 68
>PLN02939 transferase, transferring glycosyl groups
Probab=86.19 E-value=1.8 Score=50.89 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=65.6
Q ss_pred HhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCC--------cEEEEEcCCChhhHHHHHhc-
Q 011702 360 YSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWE--------AFSIQVDVSEIPRLKEVLMA- 430 (479)
Q Consensus 360 ~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~--------~fsV~v~e~di~~L~~iL~s- 430 (479)
...++.|.++++|+=+++..--+.|||++||+||+...+= ++ +-|.|++ .-.+.++..+...|.+.|..
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-LN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-Cc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999999998764321 11 1122332 34566777787766554432
Q ss_pred ---C--CHHHHHHHHHHHHHHHhhceecCCCCCc
Q 011702 431 ---V--PEEKYKRLKENLKAVRRHFELNHPAKRF 459 (479)
Q Consensus 431 ---I--s~~~i~~mq~~l~~v~~~f~~~~p~~~~ 459 (479)
+ .++.+.+|+++. +.+.|.|......|
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~qY 960 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWDSSASQY 960 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHHHHHHHH
Confidence 2 477788887754 46789887654443
No 69
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=85.02 E-value=5.3 Score=41.29 Aligned_cols=106 Identities=16% Similarity=0.227 Sum_probs=57.9
Q ss_pred hhhHHHHHhhccCCCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCC-----
Q 011702 331 TIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSD----- 405 (479)
Q Consensus 331 ~iR~~L~~~~~~~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~d----- 405 (479)
..+..|.+..++....+.+.+.. .+..+.|+.|...++.+| ..-+.||+++|+ |||+.+.. |-.+
T Consensus 242 ~~~~~l~~~~~~~~~~v~~~g~~---~~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~~--~g~~~~n~~ 311 (380)
T PRK13609 242 ALKQSLEDLQETNPDALKVFGYV---ENIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKPV--PGQEKENAM 311 (380)
T ss_pred HHHHHHHHHHhcCCCcEEEEech---hhHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCCC--CCcchHHHH
Confidence 34444433333222345555433 246688888887665444 234889999998 68876531 2111
Q ss_pred CCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHHHh
Q 011702 406 VLRWEAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKAVRR 448 (479)
Q Consensus 406 vLDW~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~v~~ 448 (479)
.+.-..+.+.+ .+..+|.+.|..+ .++.+.+|.++.+++.+
T Consensus 312 ~~~~~G~~~~~--~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~ 354 (380)
T PRK13609 312 YFERKGAAVVI--RDDEEVFAKTEALLQDDMKLLQMKEAMKSLYL 354 (380)
T ss_pred HHHhCCcEEEE--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCC
Confidence 12223444433 4555555555443 46778888887766443
No 70
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=84.52 E-value=4.3 Score=37.09 Aligned_cols=78 Identities=17% Similarity=0.064 Sum_probs=50.1
Q ss_pred CeEEEecccccchh-hHHHHHhhccCCCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecC
Q 011702 319 PYLAFFAGGLHGTI-RSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQ 397 (479)
Q Consensus 319 ~~L~fFaG~~~g~i-R~~L~~~~~~~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd 397 (479)
++-+.+.|+..... ...+.... .....+.+.+..+....+...+..|..+++|...+..+..+.|||.+|| |||.++
T Consensus 135 ~~~~~i~G~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~ 212 (229)
T cd01635 135 DLKLVIAGDGPEREYLEELLAAL-LLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATD 212 (229)
T ss_pred CeEEEEEeCCCChHHHHHHHHhc-CCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcC
Confidence 45666777654322 11111111 2224566666544445667777779999999998888999999999987 556665
Q ss_pred C
Q 011702 398 N 398 (479)
Q Consensus 398 ~ 398 (479)
.
T Consensus 213 ~ 213 (229)
T cd01635 213 V 213 (229)
T ss_pred C
Confidence 4
No 71
>PLN00142 sucrose synthase
Probab=83.87 E-value=3.3 Score=48.06 Aligned_cols=92 Identities=9% Similarity=0.123 Sum_probs=63.6
Q ss_pred Hhhccc-ceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc------CC
Q 011702 360 YSFMLK-SKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMA------VP 432 (479)
Q Consensus 360 ~~~m~~-SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s------Is 432 (479)
...+.+ +..+++|+=++....-++|||++|| |||.++.=-+ .|+|.=..-.+.|+..|...+.+.|.. -.
T Consensus 660 yr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~--~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D 736 (815)
T PLN00142 660 YRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGP--AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED 736 (815)
T ss_pred HHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC
Confidence 334443 3455678878888889999999998 7888774222 244444566778888888765555432 25
Q ss_pred HHHHHHHHHHHH-HHHhhceecC
Q 011702 433 EEKYKRLKENLK-AVRRHFELNH 454 (479)
Q Consensus 433 ~~~i~~mq~~l~-~v~~~f~~~~ 454 (479)
++...+|.++.+ ++.++|.|..
T Consensus 737 p~lr~~mg~~Ar~rv~e~FSWe~ 759 (815)
T PLN00142 737 PSYWNKISDAGLQRIYECYTWKI 759 (815)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHH
Confidence 778888888864 5789999875
No 72
>PRK10125 putative glycosyl transferase; Provisional
Probab=82.53 E-value=4.7 Score=42.77 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=52.0
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHH
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEV 427 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~i 427 (479)
.+..+.|+.+.-.+.|+-++....-+.|||++|| |||.+|-=-. .|+++= .-.+.++..|+..|.+.
T Consensus 298 ~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~--~Eiv~~-~~G~lv~~~d~~~La~~ 364 (405)
T PRK10125 298 RKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAA--REVLQK-SGGKTVSEEEVLQLAQL 364 (405)
T ss_pred HHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCCh--HHhEeC-CcEEEECCCCHHHHHhc
Confidence 3567888889998999988888889999999997 8988875332 345542 35888899999888764
No 73
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=82.19 E-value=9.2 Score=39.84 Aligned_cols=78 Identities=14% Similarity=0.239 Sum_probs=49.9
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCC------CCCCcEEEEEcCCChhhHHHHHhcC
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDV------LRWEAFSIQVDVSEIPRLKEVLMAV 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dv------LDW~~fsV~v~e~di~~L~~iL~sI 431 (479)
+..+.|+.|...+.++|. --+.|||++|| |||+.+. .|-+++ ++ ....+.+ .+...|.+.+..+
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~--~pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGY--IPGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAEW 344 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecC--CCccchhhHHHHHh-CCceeec--CCHHHHHHHHHHH
Confidence 578899999998887773 23899999998 7888763 243332 22 3445543 4555555555443
Q ss_pred ---CHHHHHHHHHHHHH
Q 011702 432 ---PEEKYKRLKENLKA 445 (479)
Q Consensus 432 ---s~~~i~~mq~~l~~ 445 (479)
.++...+|+++.++
T Consensus 345 l~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 345 FGDKSDELEAMSENALK 361 (382)
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 25667777776554
No 74
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=81.34 E-value=5 Score=42.14 Aligned_cols=84 Identities=12% Similarity=0.196 Sum_probs=53.9
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCC-----CCcEEEEEcCCChhhHHHHHhcC-
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLR-----WEAFSIQVDVSEIPRLKEVLMAV- 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLD-----W~~fsV~v~e~di~~L~~iL~sI- 431 (479)
+..+.|+.|..++..+|. .-+.||+++|+ |||+.+. .|=++..+ =..+++.+ .+..++.+.|..+
T Consensus 266 ~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~--~pgqe~~N~~~~~~~G~g~~~--~~~~~l~~~i~~ll 336 (391)
T PRK13608 266 HMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNP--APGQELENALYFEEKGFGKIA--DTPEEAIKIVASLT 336 (391)
T ss_pred hHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCC--CCCcchhHHHHHHhCCcEEEe--CCHHHHHHHHHHHh
Confidence 577899999999885552 24899999997 8888764 24333221 22344443 2444454444433
Q ss_pred -CHHHHHHHHHHHHHHHhhc
Q 011702 432 -PEEKYKRLKENLKAVRRHF 450 (479)
Q Consensus 432 -s~~~i~~mq~~l~~v~~~f 450 (479)
.++++.+|.++.+...+.+
T Consensus 337 ~~~~~~~~m~~~~~~~~~~~ 356 (391)
T PRK13608 337 NGNEQLTNMISTMEQDKIKY 356 (391)
T ss_pred cCHHHHHHHHHHHHHhcCCC
Confidence 4678889998888766544
No 75
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=80.74 E-value=8.4 Score=44.10 Aligned_cols=92 Identities=12% Similarity=0.159 Sum_probs=59.1
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCCh--h----hHHHHHhcC
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEI--P----RLKEVLMAV 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di--~----~L~~iL~sI 431 (479)
+....|+.+...+.|+-++..+.-++|||++|| |||.++.-- ..++|.=..-.+.++..|. + .|.++|...
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG--~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l 660 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGG--AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMC 660 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCC--hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhCh
Confidence 566778888888888777777889999999997 888887422 3344543445666776553 2 344444443
Q ss_pred CHHHHHHHHHHHHH-HHhhceecC
Q 011702 432 PEEKYKRLKENLKA-VRRHFELNH 454 (479)
Q Consensus 432 s~~~i~~mq~~l~~-v~~~f~~~~ 454 (479)
.. -.+|+++.+. +.++|.|..
T Consensus 661 ~~--~~~l~~~ar~~a~~~FS~~~ 682 (694)
T PRK15179 661 AA--DPGIARKAADWASARFSLNQ 682 (694)
T ss_pred hc--cHHHHHHHHHHHHHhCCHHH
Confidence 22 2345555554 567887753
No 76
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=79.52 E-value=2.8 Score=43.48 Aligned_cols=99 Identities=11% Similarity=0.172 Sum_probs=56.2
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCC-----CCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCC
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGY-----EVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSE 420 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~-----~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~d 420 (479)
.+.+.+..+ ..+..+.|+.+..|+.|.-. +.....++|+|++|+ |||.++ +.++.+-..- +.+...+
T Consensus 255 nV~~~G~~~-~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~-----~~~~~~~~~~-~~~~~~d 326 (373)
T cd04950 255 NVHYLGPKP-YKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP-----LPEVRRYEDE-VVLIADD 326 (373)
T ss_pred CEEEeCCCC-HHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC-----cHHHHhhcCc-EEEeCCC
Confidence 455555443 24678899999999998632 222457999999998 788664 2344433332 3333446
Q ss_pred hhhHHHHHhcC-CHHHHHHHHHHHHHHHhhceec
Q 011702 421 IPRLKEVLMAV-PEEKYKRLKENLKAVRRHFELN 453 (479)
Q Consensus 421 i~~L~~iL~sI-s~~~i~~mq~~l~~v~~~f~~~ 453 (479)
..++.+.|..+ ..+.-.+.++. +++.+.+.|.
T Consensus 327 ~~~~~~ai~~~l~~~~~~~~~~~-~~~~~~~sW~ 359 (373)
T cd04950 327 PEEFVAAIEKALLEDGPARERRR-LRLAAQNSWD 359 (373)
T ss_pred HHHHHHHHHHHHhcCCchHHHHH-HHHHHHCCHH
Confidence 66655555542 21111111221 2266777775
No 77
>PLN02316 synthase/transferase
Probab=79.24 E-value=8.6 Score=45.85 Aligned_cols=96 Identities=17% Similarity=0.240 Sum_probs=63.2
Q ss_pred hhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCC-CCCCC------------cEEEEEcCCChhhHHHH
Q 011702 361 SFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSD-VLRWE------------AFSIQVDVSEIPRLKEV 427 (479)
Q Consensus 361 ~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~d-vLDW~------------~fsV~v~e~di~~L~~i 427 (479)
..++.+.+.++|+=+++...-..|||++||+||+-..+ =+ .| |.|++ .-.+.++..+...|...
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG-GL--~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~A 991 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG-GL--FDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYA 991 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC-Cc--HhhccccccccccccccccCCceEEeCCCCHHHHHHH
Confidence 67999999999999999999999999999999996443 11 12 23432 34667788777654443
Q ss_pred Hhc-CC--HHHHHHHHHHHHH-HHhhceecCCCCCc
Q 011702 428 LMA-VP--EEKYKRLKENLKA-VRRHFELNHPAKRF 459 (479)
Q Consensus 428 L~s-Is--~~~i~~mq~~l~~-v~~~f~~~~p~~~~ 459 (479)
|.. +. .+.-..|++..++ +.+.|.|.....+|
T Consensus 992 L~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316 992 LNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 332 21 1223334444443 57889998765544
No 78
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=78.13 E-value=3.8 Score=41.36 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=52.3
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCC-----CCCCCCcEEEEEcCCC--hhhHHHHHhc
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFS-----DVLRWEAFSIQVDVSE--IPRLKEVLMA 430 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~-----dvLDW~~fsV~v~e~d--i~~L~~iL~s 430 (479)
++.+.|..+..++.++| ..-++|||++|+ |||+.+.-.-+-+ +.+.-....+.++..+ ...|.+.|+.
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 78899999999999876 235889999997 7777532000000 1333455666676655 5555554443
Q ss_pred C--CHHHHHHHHHHHHH
Q 011702 431 V--PEEKYKRLKENLKA 445 (479)
Q Consensus 431 I--s~~~i~~mq~~l~~ 445 (479)
+ .++...+|.++.+.
T Consensus 318 ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLLDPANLEAMAEAARK 334 (348)
T ss_pred HHcCHHHHHHHHHHHHh
Confidence 2 46667777776654
No 79
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=76.11 E-value=6.5 Score=45.54 Aligned_cols=86 Identities=8% Similarity=0.115 Sum_probs=62.2
Q ss_pred ceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC------CHHHHHHH
Q 011702 366 SKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV------PEEKYKRL 439 (479)
Q Consensus 366 SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI------s~~~i~~m 439 (479)
+..+++|+=+++...-++|||++|| |||.++.=- ..|+|.=..-.+.|+..|...+.+.|..+ .++...+|
T Consensus 644 adVfV~PS~~EpFGLvvLEAMAcGl-PVVAT~~GG--~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 644 KGIFVQPALYEAFGLTVLEAMTCGL-PTFATRFGG--PLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred CcEEEECCcccCCCHHHHHHHHcCC-CEEEcCCCC--HHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3567888888888999999999998 555565321 22344445667788888887766665542 57788888
Q ss_pred HHHHH-HHHhhceecC
Q 011702 440 KENLK-AVRRHFELNH 454 (479)
Q Consensus 440 q~~l~-~v~~~f~~~~ 454 (479)
.++.+ ++.++|.|..
T Consensus 721 s~~a~~rV~~~FSW~~ 736 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKI 736 (784)
T ss_pred HHHHHHHHHHhCCHHH
Confidence 88865 5789999975
No 80
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=75.02 E-value=4 Score=44.10 Aligned_cols=91 Identities=13% Similarity=0.112 Sum_probs=64.1
Q ss_pred ChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcE---eEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc--
Q 011702 356 DQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCV---PVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMA-- 430 (479)
Q Consensus 356 ~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCI---PViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s-- 430 (479)
..+..+.++.+.-++.|+-.+....-..|||++||- |||+++.-=.+ +. ..-++.|+..|..++.+.|..
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~--~~---~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA--EE---LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccch--hh---cCCCEEECCCCHHHHHHHHHHHH
Confidence 357888999999999988777667778999999996 69998743211 11 234678888888877665543
Q ss_pred -CCHHHHHHHHHHHHHHHhhce
Q 011702 431 -VPEEKYKRLKENLKAVRRHFE 451 (479)
Q Consensus 431 -Is~~~i~~mq~~l~~v~~~f~ 451 (479)
.++++..+|.++.++....|.
T Consensus 426 ~~~~~e~~~~~~~~~~~v~~~~ 447 (460)
T cd03788 426 TMPLEERRERHRKLREYVRTHD 447 (460)
T ss_pred cCCHHHHHHHHHHHHHHHHhCC
Confidence 366777777666666555553
No 81
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=72.34 E-value=13 Score=35.33 Aligned_cols=104 Identities=20% Similarity=0.275 Sum_probs=57.5
Q ss_pred CeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHH
Q 011702 346 DLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLK 425 (479)
Q Consensus 346 dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~ 425 (479)
.+...+..+ .....+.++.+...+.|.-.+....-+.||+++| +|||.++.- -..+++.=....+.+...+...+.
T Consensus 258 ~v~~~g~~~-~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~ 333 (381)
T COG0438 258 NVKFLGYVP-DEELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG--GIPEVVEDGETGLLVPPGDVEELA 333 (381)
T ss_pred cEEEecccC-HHHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC--ChHHHhcCCCceEecCCCCHHHHH
Confidence 444444333 2355667888899999954433334499999999 999888753 122222222122244444555555
Q ss_pred HHHhcCC--HHHHHHHHH-HHHHHHhhceec
Q 011702 426 EVLMAVP--EEKYKRLKE-NLKAVRRHFELN 453 (479)
Q Consensus 426 ~iL~sIs--~~~i~~mq~-~l~~v~~~f~~~ 453 (479)
+.+..+- .+...++.+ ....+.++|.|.
T Consensus 334 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (381)
T COG0438 334 DALEQLLEDPELREELGEAARERVEEEFSWE 364 (381)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHhcCHH
Confidence 5544442 233555554 344445677774
No 82
>PLN02275 transferase, transferring glycosyl groups
Probab=70.67 E-value=17 Score=37.76 Aligned_cols=102 Identities=9% Similarity=0.105 Sum_probs=59.0
Q ss_pred CeEEEecccccchhhHHHHHhhccCC-CCeEEecccCCChhHHhhcccceEEEeeCCC---CCCCchHHHHHhcCcEeEE
Q 011702 319 PYLAFFAGGLHGTIRSILLQHWKGHD-KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGY---EVASPRIVESIYAQCVPVI 394 (479)
Q Consensus 319 ~~L~fFaG~~~g~iR~~L~~~~~~~d-~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~---~~~s~Rl~EAi~~GCIPVi 394 (479)
.+-+.+.|. |..|..|.+..+... .++.+....-...++.+.|+.+.-|+.|... +....-++|||++|| |||
T Consensus 261 ~i~l~ivG~--G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~-PVV 337 (371)
T PLN02275 261 RLLFIITGK--GPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL-PVC 337 (371)
T ss_pred CeEEEEEeC--CCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC-CEE
Confidence 466777773 556666655444321 2355544311246788999999999875321 223457999999998 888
Q ss_pred ecCCccCCCCCCCCCCcEEEEEcCCChhhHHHH
Q 011702 395 LSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEV 427 (479)
Q Consensus 395 isd~~~LPF~dvLDW~~fsV~v~e~di~~L~~i 427 (479)
.++.=- ..+++.=....+.++ +...|.+.
T Consensus 338 a~~~gg--~~eiv~~g~~G~lv~--~~~~la~~ 366 (371)
T PLN02275 338 AVSYSC--IGELVKDGKNGLLFS--SSSELADQ 366 (371)
T ss_pred EecCCC--hHHHccCCCCeEEEC--CHHHHHHH
Confidence 876311 234443344444554 34444443
No 83
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=69.22 E-value=5.5 Score=41.97 Aligned_cols=88 Identities=11% Similarity=0.134 Sum_probs=53.6
Q ss_pred hHHhhcccceEEEeeCCC-CCCCchHHHHHhcCcEeEEecCCccCCCCCCCC---CCcEEEEEcCCChhhHHHHHhcC--
Q 011702 358 DYYSFMLKSKFCLCPSGY-EVASPRIVESIYAQCVPVILSQNYVLPFSDVLR---WEAFSIQVDVSEIPRLKEVLMAV-- 431 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~-~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLD---W~~fsV~v~e~di~~L~~iL~sI-- 431 (479)
+..+.++.+..|++++.. +....-++||+++|| |||.+++.. -+.++.+ -..+.+ +..|..+|.+.|..+
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~--~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAI--QVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeE--EECCHHHHHHHHHHHhc
Confidence 567888999887775332 223455999999998 888876421 1222221 123333 355666665555543
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 011702 432 PEEKYKRLKENLKAVRRH 449 (479)
Q Consensus 432 s~~~i~~mq~~l~~v~~~ 449 (479)
.++...+|.++.++..+.
T Consensus 388 ~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 388 DPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 467778888877765433
No 84
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=68.96 E-value=50 Score=33.09 Aligned_cols=131 Identities=13% Similarity=0.115 Sum_probs=82.6
Q ss_pred CCCCeEEEecccccch-hhHHHHHhhccCCC--CeEEeccc-C-------C----ChhHHhhcccceEEEeeCCCCCCCc
Q 011702 316 APRPYLAFFAGGLHGT-IRSILLQHWKGHDK--DLIVFEYL-P-------K----DQDYYSFMLKSKFCLCPSGYEVASP 380 (479)
Q Consensus 316 ~~R~~L~fFaG~~~g~-iR~~L~~~~~~~d~--dv~v~e~~-~-------~----~~~y~~~m~~SkFCL~P~G~~~~s~ 380 (479)
++|.-.++|.|+..|. .|..|++...+... ++.+...+ + . ...-.+...+-||=+...|.+ +|-
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~-~S~ 159 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVA-WSV 159 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCcc-chh
Confidence 4677889999999887 89999886655422 23333221 0 0 001234445689999999987 578
Q ss_pred hHHHHHhcCcEeEEecCCccCCCCC-CCCCCcEEEEEcC--CC--hhhHHHHHhcCCHHHHHHHHHHHHHHHhh
Q 011702 381 RIVESIYAQCVPVILSQNYVLPFSD-VLRWEAFSIQVDV--SE--IPRLKEVLMAVPEEKYKRLKENLKAVRRH 449 (479)
Q Consensus 381 Rl~EAi~~GCIPViisd~~~LPF~d-vLDW~~fsV~v~e--~d--i~~L~~iL~sIs~~~i~~mq~~l~~v~~~ 449 (479)
|+-=-|.+|+|++.....|..=|.+ ...|.-|. -|.. +| +.+..+.+++ .+++.+++-++.+...+.
T Consensus 160 rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d~sd~~l~~~i~~~~~-~~~~a~~Ia~~~~~~~~~ 231 (256)
T smart00672 160 RLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSDLSCRELKEAVDWGNE-HDKKAQEIGKRGSEFIQQ 231 (256)
T ss_pred hHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCCCchhhHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 9999999999998887554333333 34566553 3322 23 6666665555 356666666677665444
No 85
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=67.14 E-value=33 Score=34.50 Aligned_cols=93 Identities=17% Similarity=0.256 Sum_probs=58.2
Q ss_pred CCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCC-c------cCCCCCCCCCCcEEEEEc
Q 011702 345 KDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQN-Y------VLPFSDVLRWEAFSIQVD 417 (479)
Q Consensus 345 ~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~-~------~LPF~dvLDW~~fsV~v~ 417 (479)
+.+.+.+.. .++.+.|..+...+++.|. .-+.|||.+|+ |||+.+. . ..+. +.|......+.++
T Consensus 235 ~~v~~~g~~---~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~-~~l~~~g~g~~v~ 305 (350)
T cd03785 235 VNYEVFPFI---DDMAAAYAAADLVISRAGA----STVAELAALGL-PAILIPLPYAADDHQTANA-RALVKAGAAVLIP 305 (350)
T ss_pred CCeEEeehh---hhHHHHHHhcCEEEECCCH----hHHHHHHHhCC-CEEEeecCCCCCCcHHHhH-HHHHhCCCEEEEe
Confidence 345555543 4788999999999988772 34899999998 5555432 1 0111 2233345667777
Q ss_pred CC--ChhhHHHHHhcC--CHHHHHHHHHHHHHH
Q 011702 418 VS--EIPRLKEVLMAV--PEEKYKRLKENLKAV 446 (479)
Q Consensus 418 e~--di~~L~~iL~sI--s~~~i~~mq~~l~~v 446 (479)
.. +..+|.+.|+.+ .++...+|+++.+..
T Consensus 306 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 306 QEELTPERLAAALLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 65 666666655544 466777777776543
No 86
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=66.45 E-value=21 Score=38.73 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=61.0
Q ss_pred ChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEe----EEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc-
Q 011702 356 DQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVP----VILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMA- 430 (479)
Q Consensus 356 ~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIP----Viisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s- 430 (479)
..+..+.++.+.-|++|+=.+...--..|||++|+ | ||+++.-=.+ +.|. -++.|+..|...+.+.|..
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~--~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAA--QELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCCh--HHhC---CcEEECCCCHHHHHHHHHHH
Confidence 45788999999999998866666778999999997 8 8888743111 2232 3778899998877665543
Q ss_pred --CCHHHHHHHHHHHHHHHhhc
Q 011702 431 --VPEEKYKRLKENLKAVRRHF 450 (479)
Q Consensus 431 --Is~~~i~~mq~~l~~v~~~f 450 (479)
.++++..++.+++++.-.++
T Consensus 420 L~~~~~er~~r~~~~~~~v~~~ 441 (456)
T TIGR02400 420 LTMPLEEREERHRAMMDKLRKN 441 (456)
T ss_pred HcCCHHHHHHHHHHHHHHHhhC
Confidence 35555555555554433333
No 87
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=65.66 E-value=8.5 Score=39.26 Aligned_cols=88 Identities=15% Similarity=0.222 Sum_probs=54.1
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCC-----CCCCCCCCcEEEEEcCCC--hhhHHHHHh
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLP-----FSDVLRWEAFSIQVDVSE--IPRLKEVLM 429 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LP-----F~dvLDW~~fsV~v~e~d--i~~L~~iL~ 429 (479)
.++.+.|..+..+++..|. --++|||++||--|++....... ..+.|--....+.++.++ ...|.+.++
T Consensus 244 ~~~~~~~~~~d~~i~~~g~----~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~ 319 (357)
T PRK00726 244 DDMAAAYAAADLVICRAGA----STVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLL 319 (357)
T ss_pred hhHHHHHHhCCEEEECCCH----HHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHH
Confidence 3678999999999998772 34889999998444443211111 112232245677787776 556655555
Q ss_pred cC--CHHHHHHHHHHHHHHHh
Q 011702 430 AV--PEEKYKRLKENLKAVRR 448 (479)
Q Consensus 430 sI--s~~~i~~mq~~l~~v~~ 448 (479)
.+ .++...+|+++.++..+
T Consensus 320 ~ll~~~~~~~~~~~~~~~~~~ 340 (357)
T PRK00726 320 ELLSDPERLEAMAEAARALGK 340 (357)
T ss_pred HHHcCHHHHHHHHHHHHhcCC
Confidence 43 35666778777654433
No 88
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=65.31 E-value=24 Score=36.16 Aligned_cols=86 Identities=14% Similarity=0.215 Sum_probs=51.7
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCC----CCCCCcE------------E--EEEcCC
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSD----VLRWEAF------------S--IQVDVS 419 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~d----vLDW~~f------------s--V~v~e~ 419 (479)
+..+.|+.|..+++++|.. ..||+++|| |||+..+. -||.. .+....+ . +..++.
T Consensus 254 ~~~~~~~~aDl~v~~sG~~-----~lEa~a~G~-PvI~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (380)
T PRK00025 254 QKREAMAAADAALAASGTV-----TLELALLKV-PMVVGYKV-SPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEA 326 (380)
T ss_pred cHHHHHHhCCEEEECccHH-----HHHHHHhCC-CEEEEEcc-CHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCC
Confidence 5678899999999987643 459999998 77776443 22221 1111111 1 112333
Q ss_pred ChhhHHHHHhcC--CHHHHHHHHHHHHHHHhhc
Q 011702 420 EIPRLKEVLMAV--PEEKYKRLKENLKAVRRHF 450 (479)
Q Consensus 420 di~~L~~iL~sI--s~~~i~~mq~~l~~v~~~f 450 (479)
+..+|.+.+..+ .++...+|.++...+.+..
T Consensus 327 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 359 (380)
T PRK00025 327 TPEKLARALLPLLADGARRQALLEGFTELHQQL 359 (380)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 444555544443 4677778888887777665
No 89
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=62.86 E-value=60 Score=34.59 Aligned_cols=130 Identities=17% Similarity=0.168 Sum_probs=78.2
Q ss_pred CCCCeEEEecccccch-hhHHHHHhhccCC--CCeEEeccc-------CCChhHHhhcccceEEEeeCCCCCCCchHHHH
Q 011702 316 APRPYLAFFAGGLHGT-IRSILLQHWKGHD--KDLIVFEYL-------PKDQDYYSFMLKSKFCLCPSGYEVASPRIVES 385 (479)
Q Consensus 316 ~~R~~L~fFaG~~~g~-iR~~L~~~~~~~d--~dv~v~e~~-------~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EA 385 (479)
.+|.-.+||+|+..+. .|..|++.-.+.. .+..+.... .....-.+...+-||=+...|.+ +|-|+-=-
T Consensus 155 ~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~-~S~Rlkyl 233 (395)
T PF05686_consen 155 EDKKPKAFWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNA-WSGRLKYL 233 (395)
T ss_pred hhcccceEECCCcCCCcchhHHHHHhccCCccceeeechhhhhhhccccccccCHHHHhhhheeecCCCce-eehhHHHH
Confidence 4577789999998765 5998886443322 122332211 00112234456678888999987 47899999
Q ss_pred HhcCcEeEEecCCccCCCCC-CCCCCcEEEEEcC-CChhhHHHHHhcC--CHHHHHHHHHHHHHHH
Q 011702 386 IYAQCVPVILSQNYVLPFSD-VLRWEAFSIQVDV-SEIPRLKEVLMAV--PEEKYKRLKENLKAVR 447 (479)
Q Consensus 386 i~~GCIPViisd~~~LPF~d-vLDW~~fsV~v~e-~di~~L~~iL~sI--s~~~i~~mq~~l~~v~ 447 (479)
|++|+|.+.....|..=|.+ ...|.-|. -|.. .+..+|++.++=. .+++..++-+++....
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYV-PV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~ 298 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYV-PVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFA 298 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEE-EeccccchhhHHHHhhhcccChHHHHHHHHHHHHHH
Confidence 99999988876554333333 35676663 4444 3455555554433 2556666666666544
No 90
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=58.88 E-value=92 Score=31.88 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=55.8
Q ss_pred EecccccchhhHHHHHhhccCCCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCC
Q 011702 323 FFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLP 402 (479)
Q Consensus 323 fFaG~~~g~iR~~L~~~~~~~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LP 402 (479)
.+.|..++.++..+.+.... .+.+.+.+..+ ..++...|+.+.+++.++|. -+.||+++|| |||...+.- -
T Consensus 234 vi~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~~~~-~ 304 (365)
T TIGR00236 234 VYPVHLNPVVREPLHKHLGD-SKRVHLIEPLE-YLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLRDTT-E 304 (365)
T ss_pred EEECCCChHHHHHHHHHhCC-CCCEEEECCCC-hHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECCCCC-C
Confidence 33333334555555554432 34566666432 34788999999999888763 2799999997 777753211 1
Q ss_pred CCCCCCCCcEEEEEcCCChhhHHHHHhc
Q 011702 403 FSDVLRWEAFSIQVDVSEIPRLKEVLMA 430 (479)
Q Consensus 403 F~dvLDW~~fsV~v~e~di~~L~~iL~s 430 (479)
..+.+. ....+.++ .+..+|.+.|..
T Consensus 305 ~~e~~~-~g~~~lv~-~d~~~i~~ai~~ 330 (365)
T TIGR00236 305 RPETVE-AGTNKLVG-TDKENITKAAKR 330 (365)
T ss_pred ChHHHh-cCceEEeC-CCHHHHHHHHHH
Confidence 224444 34445554 455555554443
No 91
>PLN02846 digalactosyldiacylglycerol synthase
Probab=52.83 E-value=49 Score=36.15 Aligned_cols=38 Identities=18% Similarity=0.186 Sum_probs=30.9
Q ss_pred hhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCc
Q 011702 361 SFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNY 399 (479)
Q Consensus 361 ~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~ 399 (479)
+.+..+..++.|+-.+....-+.|||++|+ |||..|.-
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-PVVa~~~~ 333 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-IVVCANHP 333 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCC-cEEEecCC
Confidence 577777888888877777888999999997 88888753
No 92
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=48.43 E-value=24 Score=30.09 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=27.8
Q ss_pred eEEEecCCCCCcccCCCCCCccchHHHHHHHHhccCCcccCCCCCCceEEEee
Q 011702 151 KVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLP 203 (479)
Q Consensus 151 KVYVY~~g~~p~~h~~p~~~~Ys~E~~f~~~L~~~~S~~rT~dP~eA~lFyvP 203 (479)
|||+...| ...++|.+|. +...|... .--.|.+|++||+.+|=
T Consensus 1 Kv~i~T~G--------C~~N~~Dse~-i~~~l~~~-G~~~~~~~e~AD~iiiN 43 (98)
T PF00919_consen 1 KVYIETLG--------CQMNQYDSER-IASILQAA-GYEIVDDPEEADVIIIN 43 (98)
T ss_pred CEEEEECC--------CcccHHHHHH-HHHHHHhc-CCeeecccccCCEEEEE
Confidence 46666654 3457776663 44555541 33579999999999883
No 93
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=43.11 E-value=1.3e+02 Score=33.28 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=65.2
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCC----ccCCCCCCC-CCCcEEEEEcCCChhhHHHHHhc--
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQN----YVLPFSDVL-RWEAFSIQVDVSEIPRLKEVLMA-- 430 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~----~~LPF~dvL-DW~~fsV~v~e~di~~L~~iL~s-- 430 (479)
-+.+....|.+=+.|.=++|..---..||++|||||+-.-+ -+.|+.+.+ .=..-.+.+.+.+...|...|+.
T Consensus 361 la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~ 440 (487)
T COG0297 361 LAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRAL 440 (487)
T ss_pred HHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHH
Confidence 56788899999999999999998899999999999988753 455554211 01344555555566555444432
Q ss_pred ----CCHHHHHHHHHHHHHHHhhceecCCCCCc
Q 011702 431 ----VPEEKYKRLKENLKAVRRHFELNHPAKRF 459 (479)
Q Consensus 431 ----Is~~~i~~mq~~l~~v~~~f~~~~p~~~~ 459 (479)
.++.....+|.+... ..|.|+.+...|
T Consensus 441 ~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y 471 (487)
T COG0297 441 VLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEY 471 (487)
T ss_pred HHhhCCHHHHHHHHHhhcc--cccCchhHHHHH
Confidence 233334555554443 678887766655
No 94
>PLN02501 digalactosyldiacylglycerol synthase
Probab=41.80 E-value=53 Score=37.97 Aligned_cols=38 Identities=16% Similarity=0.080 Sum_probs=30.6
Q ss_pred HhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCC
Q 011702 360 YSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQN 398 (479)
Q Consensus 360 ~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~ 398 (479)
.+.++.+...+.|+-.+....-+.|||++|| |||.+|.
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~Gl-PVVATd~ 650 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAMGK-FVVCADH 650 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHcCC-CEEEecC
Confidence 3567777777778777777888999999998 8888875
No 95
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=41.39 E-value=1e+02 Score=36.08 Aligned_cols=90 Identities=12% Similarity=0.035 Sum_probs=59.4
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEe----EEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh---
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVP----VILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLM--- 429 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIP----Viisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~--- 429 (479)
.++...++.+.-|++|+=.+...--..|||++|+ | +|+++--= -.+++ ..-++.|+..|+..+.+.+.
T Consensus 367 ~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~-p~~gvlVlSe~~G--~~~~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK-AKKGVLVLSEFAG--AGQSL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHhCCEEEeCccccccCcchhhHheeec-CCCCCEEeeCCcC--chhhh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 5788999999999999865555667999999998 6 77776321 11122 34588999999887655432
Q ss_pred cCCHHHHHHHHHHHHHHHhhce
Q 011702 430 AVPEEKYKRLKENLKAVRRHFE 451 (479)
Q Consensus 430 sIs~~~i~~mq~~l~~v~~~f~ 451 (479)
.+++++..++.+++.+.-..+.
T Consensus 442 ~m~~~er~~r~~~~~~~v~~~~ 463 (797)
T PLN03063 442 NMSDEERETRHRHNFQYVKTHS 463 (797)
T ss_pred hCCHHHHHHHHHHHHHhhhhCC
Confidence 2455555555554444433333
No 96
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=40.09 E-value=70 Score=32.05 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=27.2
Q ss_pred hhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEe
Q 011702 357 QDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVIL 395 (479)
Q Consensus 357 ~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPVii 395 (479)
.+..+.|..|...++..|.+ ++|++.+| +|+|+
T Consensus 233 ~~m~~lm~~aDl~Is~~G~T-----~~E~~a~g-~P~i~ 265 (279)
T TIGR03590 233 ENMAELMNEADLAIGAAGST-----SWERCCLG-LPSLA 265 (279)
T ss_pred HHHHHHHHHCCEEEECCchH-----HHHHHHcC-CCEEE
Confidence 36789999999999987722 99999999 67765
No 97
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=38.20 E-value=48 Score=33.04 Aligned_cols=108 Identities=22% Similarity=0.361 Sum_probs=63.6
Q ss_pred CCCCeEEEecccccchhhHHHHHhhccCC-CCeEEecccC-------------CChhHHhhcccceEEEeeCCCCCCCch
Q 011702 316 APRPYLAFFAGGLHGTIRSILLQHWKGHD-KDLIVFEYLP-------------KDQDYYSFMLKSKFCLCPSGYEVASPR 381 (479)
Q Consensus 316 ~~R~~L~fFaG~~~g~iR~~L~~~~~~~d-~dv~v~e~~~-------------~~~~y~~~m~~SkFCL~P~G~~~~s~R 381 (479)
.++.+|++|-|.-.+ .+++..+.-+ ..+.+++... ...++.+.|..|+.+++-.|++-
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~~~~~~v~g~~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t---- 262 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALPDYQFIVFGPNAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYTT---- 262 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCCCCeEEEEcCCcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHHH----
Confidence 356688888876655 3333333222 2344432210 12578899999999999999873
Q ss_pred HHHHHhcCcEeEEecCCc---cCCC-CCCCCCCcEEEEEcCCCh--hhHHHHHhcCC
Q 011702 382 IVESIYAQCVPVILSQNY---VLPF-SDVLRWEAFSIQVDVSEI--PRLKEVLMAVP 432 (479)
Q Consensus 382 l~EAi~~GCIPViisd~~---~LPF-~dvLDW~~fsV~v~e~di--~~L~~iL~sIs 432 (479)
+.||+.+|+ |+|+-..- ...+ ...|.=....+.++..++ .+|.+.|+++|
T Consensus 263 ~~Ea~~~g~-P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~~ 318 (318)
T PF13528_consen 263 ISEALALGK-PALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERLP 318 (318)
T ss_pred HHHHHHcCC-CEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcCC
Confidence 889999886 66654321 1111 011333455666655554 46777777664
No 98
>PRK14094 psbM photosystem II reaction center protein M; Provisional
Probab=26.90 E-value=79 Score=23.63 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=9.5
Q ss_pred cCCCCCcceeeeeccCCC
Q 011702 28 SSDYFSSFSMISFNSTAS 45 (479)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~ 45 (479)
+|..+||| |++.|+
T Consensus 30 ~s~~kssf----~sd~sk 43 (50)
T PRK14094 30 QDGEKSSF----YSDSSK 43 (50)
T ss_pred cccCccce----eccccC
Confidence 67777777 666655
No 99
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional
Probab=26.89 E-value=2.2e+02 Score=29.39 Aligned_cols=78 Identities=14% Similarity=0.273 Sum_probs=49.2
Q ss_pred EEEeeCCCCCCCchH----HHHHhcCcEeEEecCCc-----cCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHH
Q 011702 368 FCLCPSGYEVASPRI----VESIYAQCVPVILSQNY-----VLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKR 438 (479)
Q Consensus 368 FCL~P~G~~~~s~Rl----~EAi~~GCIPViisd~~-----~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs~~~i~~ 438 (479)
++.||.|++.....- =.|+..|+.|..=-++= .-||. || . ..+.|.+|..+.....+.+.++++++
T Consensus 209 ~sPC~~~~~~~~~~~~~~~klAvetg~~plye~~~g~~~~~~~~~~--ld-~--~~~~pv~~~l~~q~Rf~~L~~~~~~~ 283 (299)
T PRK11865 209 LQPCPTGWGFPPEKTIEIGRLAVETGYWPLFEIENGKFKITYEPLH--LD-R--RTRKPIEEYLKVQGRFKHLTEEDIEI 283 (299)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHhcCceeEEEEECCeeccCCCccc--cc-c--cCCCCHHHHHhhCcchhcCCHHHHHH
Confidence 445777765433322 23677899998766541 12443 44 2 33445555555555666778999999
Q ss_pred HHHHHHHHHhhc
Q 011702 439 LKENLKAVRRHF 450 (479)
Q Consensus 439 mq~~l~~v~~~f 450 (479)
+|+.+.+-|+++
T Consensus 284 ~q~~v~~~~~~~ 295 (299)
T PRK11865 284 LQKYIDEKWKEL 295 (299)
T ss_pred HHHHHHHHHHHH
Confidence 999998877765
No 100
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=26.02 E-value=1.1e+02 Score=35.29 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=62.5
Q ss_pred ChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCc---EeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc--
Q 011702 356 DQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQC---VPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMA-- 430 (479)
Q Consensus 356 ~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GC---IPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~s-- 430 (479)
..++.+.++.+.-|++|+=.+...--..|||++|| =++|++...=- ..++.+ ++.|+..|...+.+.+..
T Consensus 352 ~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~-~~~l~~----~llv~P~d~~~la~ai~~~l 426 (726)
T PRK14501 352 FEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGA-AAELAE----ALLVNPNDIEGIAAAIKRAL 426 (726)
T ss_pred HHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccch-hHHhCc----CeEECCCCHHHHHHHHHHHH
Confidence 45788999999999998866655677899999987 12555542100 011121 678899998877665533
Q ss_pred -CCH-HHHHHHHHHHHHHHhhceecCCCCCcCHHHHHHHHHHHh
Q 011702 431 -VPE-EKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLR 472 (479)
Q Consensus 431 -Is~-~~i~~mq~~l~~v~~~f~~~~p~~~~Daf~mil~~lw~R 472 (479)
.++ ++..++++ ++...+.|.|..= -+.|--.+...|..
T Consensus 427 ~~~~~e~~~r~~~-~~~~v~~~~~~~w---~~~~l~~l~~~~~~ 466 (726)
T PRK14501 427 EMPEEEQRERMQA-MQERLRRYDVHKW---ASDFLDELREAAEK 466 (726)
T ss_pred cCCHHHHHHHHHH-HHHHHHhCCHHHH---HHHHHHHHHHHHhh
Confidence 243 44444443 4433345554321 13333444455443
No 101
>PF07038 DUF1324: Protein of unknown function (DUF1324); InterPro: IPR009757 This family consists of several Circovirus proteins of around 60 residues in length. The function of this family is unknown.
Probab=23.74 E-value=53 Score=24.59 Aligned_cols=40 Identities=30% Similarity=0.660 Sum_probs=29.2
Q ss_pred cccceEEEeeCCC-CCCCchHHHHHhcCcEeEEecCCccCCCCC
Q 011702 363 MLKSKFCLCPSGY-EVASPRIVESIYAQCVPVILSQNYVLPFSD 405 (479)
Q Consensus 363 m~~SkFCL~P~G~-~~~s~Rl~EAi~~GCIPViisd~~~LPF~d 405 (479)
.-+|+||+.|--+ +..|+|-+-.-..||--..+. .||.++
T Consensus 6 vfqsrfcifpltfkssasprkfltnvtgccsatvt---rlplsn 46 (59)
T PF07038_consen 6 VFQSRFCIFPLTFKSSASPRKFLTNVTGCCSATVT---RLPLSN 46 (59)
T ss_pred EEeeeeEEEEeeeccCCChHHHhhcccceeeeeEE---eccchh
Confidence 3478999999765 456899998889999765543 466553
No 102
>PF15582 Imm40: Immunity protein 40
Probab=21.46 E-value=1.2e+02 Score=30.93 Aligned_cols=61 Identities=15% Similarity=0.359 Sum_probs=34.7
Q ss_pred hHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh-cCCHHHH
Q 011702 358 DYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLM-AVPEEKY 436 (479)
Q Consensus 358 ~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~-sIs~~~i 436 (479)
...+++++||||+|---....+ ...||+|. ..++..|.-+.-.-+-.|+. +|=+.+.
T Consensus 261 ~~Y~LF~DSTF~F~NiNG~~~~-------------------~~Im~~D~---~~Ysf~vs~~~s~~v~~Iyn~GIYDK~~ 318 (327)
T PF15582_consen 261 KMYDLFCDSTFCFCNINGTHTR-------------------FSIMHSDI---DNYSFDVSDNSSKIVRWIYNRGIYDKED 318 (327)
T ss_pred HHHHHhhhceEEEEEecCceee-------------------eeeeeccc---cceeeEEEecChHHHHHHHhcccccchh
Confidence 5789999999999965444332 23467765 33444443333233444443 3555555
Q ss_pred HHHH
Q 011702 437 KRLK 440 (479)
Q Consensus 437 ~~mq 440 (479)
.+|+
T Consensus 319 ~~~~ 322 (327)
T PF15582_consen 319 RIRR 322 (327)
T ss_pred hhhh
Confidence 5554
Done!