Query 011705
Match_columns 479
No_of_seqs 398 out of 1579
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 13:39:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 1.5E-23 5.2E-28 179.2 9.1 101 270-401 2-102 (103)
2 3foj_A Uncharacterized protein 99.9 4.2E-23 1.4E-27 173.4 8.9 99 270-399 2-100 (100)
3 3eme_A Rhodanese-like domain p 99.9 6.8E-23 2.3E-27 172.8 9.1 101 270-401 2-102 (103)
4 3gk5_A Uncharacterized rhodane 99.9 5.5E-22 1.9E-26 169.5 8.6 102 269-404 3-104 (108)
5 1gmx_A GLPE protein; transfera 99.9 1E-21 3.4E-26 166.9 8.4 102 270-403 5-106 (108)
6 3d1p_A Putative thiosulfate su 99.8 1.4E-21 4.8E-26 172.8 8.4 115 270-401 23-138 (139)
7 1qxn_A SUD, sulfide dehydrogen 99.8 2.2E-21 7.6E-26 172.7 9.4 108 270-405 23-133 (137)
8 2hhg_A Hypothetical protein RP 99.8 4.1E-21 1.4E-25 169.3 10.6 113 270-404 22-136 (139)
9 3ilm_A ALR3790 protein; rhodan 99.8 3.4E-21 1.2E-25 172.6 8.9 105 271-404 1-106 (141)
10 3hix_A ALR3790 protein; rhodan 99.8 2.9E-21 1E-25 164.2 7.8 100 276-404 2-102 (106)
11 1e0c_A Rhodanese, sulfurtransf 99.8 1.7E-20 5.9E-25 182.4 11.0 114 271-400 148-270 (271)
12 3nhv_A BH2092 protein; alpha-b 99.8 1.9E-20 6.7E-25 168.1 10.5 105 270-405 16-124 (144)
13 1tq1_A AT5G66040, senescence-a 99.8 1.3E-20 4.5E-25 165.5 7.6 111 270-400 18-128 (129)
14 3flh_A Uncharacterized protein 99.8 1.8E-20 6.3E-25 163.5 8.1 102 270-402 15-120 (124)
15 2wlr_A Putative thiosulfate su 99.8 3.7E-20 1.3E-24 192.4 10.0 208 159-402 4-251 (423)
16 1e0c_A Rhodanese, sulfurtransf 99.8 8.3E-20 2.8E-24 177.6 10.9 120 270-404 9-132 (271)
17 1rhs_A Sulfur-substituted rhod 99.8 2.5E-20 8.4E-25 184.5 7.3 117 271-403 161-290 (296)
18 1urh_A 3-mercaptopyruvate sulf 99.8 1E-20 3.6E-25 185.0 4.5 113 272-401 154-278 (280)
19 1wv9_A Rhodanese homolog TT165 99.8 1.3E-20 4.6E-25 156.4 4.3 92 271-396 3-94 (94)
20 2fsx_A RV0390, COG0607: rhodan 99.8 3.6E-20 1.2E-24 166.1 6.3 117 268-403 3-141 (148)
21 3i2v_A Adenylyltransferase and 99.8 1.2E-19 4.2E-24 156.5 9.1 115 271-398 2-122 (127)
22 2k0z_A Uncharacterized protein 99.8 1.6E-20 5.5E-25 160.6 3.1 99 271-403 6-104 (110)
23 3olh_A MST, 3-mercaptopyruvate 99.8 7E-20 2.4E-24 182.7 6.6 112 272-399 177-299 (302)
24 1urh_A 3-mercaptopyruvate sulf 99.8 2.3E-19 7.8E-24 175.5 9.3 120 270-404 4-137 (280)
25 1vee_A Proline-rich protein fa 99.8 1E-19 3.6E-24 160.7 5.6 114 269-404 4-127 (134)
26 1uar_A Rhodanese; sulfurtransf 99.8 2.3E-19 7.9E-24 175.7 8.4 116 272-402 148-283 (285)
27 3hzu_A Thiosulfate sulfurtrans 99.8 3.4E-19 1.2E-23 179.1 9.6 119 271-404 41-162 (318)
28 1rhs_A Sulfur-substituted rhod 99.8 6.3E-19 2.1E-23 174.4 10.7 122 268-403 6-144 (296)
29 1t3k_A Arath CDC25, dual-speci 99.8 2.2E-19 7.4E-24 162.6 5.8 108 270-404 28-144 (152)
30 3tp9_A Beta-lactamase and rhod 99.8 5.4E-19 1.8E-23 185.4 9.1 191 159-400 273-473 (474)
31 3aay_A Putative thiosulfate su 99.8 3.6E-19 1.2E-23 173.6 7.2 113 272-402 146-276 (277)
32 3aay_A Putative thiosulfate su 99.8 7.4E-19 2.5E-23 171.4 8.6 119 271-404 7-128 (277)
33 1uar_A Rhodanese; sulfurtransf 99.8 5.3E-19 1.8E-23 173.1 6.4 119 271-404 9-130 (285)
34 3g5j_A Putative ATP/GTP bindin 99.7 1.4E-18 4.9E-23 150.6 7.9 109 270-396 5-131 (134)
35 1yt8_A Thiosulfate sulfurtrans 99.7 3.9E-18 1.3E-22 182.6 10.7 197 160-405 266-481 (539)
36 3hzu_A Thiosulfate sulfurtrans 99.7 3.8E-18 1.3E-22 171.5 9.5 213 159-403 40-310 (318)
37 3olh_A MST, 3-mercaptopyruvate 99.7 6.1E-18 2.1E-22 168.7 10.8 121 269-403 21-159 (302)
38 2jtq_A Phage shock protein E; 99.7 1.8E-18 6.1E-23 140.8 5.7 84 286-401 1-84 (85)
39 2ouc_A Dual specificity protei 99.7 1.1E-17 3.9E-22 146.0 7.9 122 271-404 2-141 (142)
40 1c25_A CDC25A; hydrolase, cell 99.7 1.1E-17 3.8E-22 151.3 7.5 109 270-403 23-149 (161)
41 2vsw_A Dual specificity protei 99.7 3.4E-18 1.2E-22 153.2 3.9 123 270-404 4-136 (153)
42 1okg_A Possible 3-mercaptopyru 99.7 8E-18 2.7E-22 173.2 6.0 116 270-403 14-145 (373)
43 1yt8_A Thiosulfate sulfurtrans 99.7 5.1E-17 1.8E-21 173.9 11.2 106 270-403 7-112 (539)
44 2j6p_A SB(V)-AS(V) reductase; 99.7 4.5E-17 1.5E-21 147.1 8.9 107 270-401 5-122 (152)
45 2a2k_A M-phase inducer phospha 99.7 5.7E-17 1.9E-21 148.7 8.2 109 270-402 24-150 (175)
46 1qb0_A Protein (M-phase induce 99.7 9.5E-17 3.3E-21 152.6 8.6 108 270-402 44-170 (211)
47 4f67_A UPF0176 protein LPG2838 99.7 1.7E-16 5.9E-21 157.0 9.7 103 270-397 122-224 (265)
48 3f4a_A Uncharacterized protein 99.6 1.9E-16 6.5E-21 146.2 7.8 112 270-401 31-158 (169)
49 2wlr_A Putative thiosulfate su 99.6 1.7E-16 5.8E-21 164.9 8.3 118 272-405 274-410 (423)
50 2eg4_A Probable thiosulfate su 99.6 3.6E-16 1.2E-20 149.0 9.8 97 272-400 123-229 (230)
51 1hzm_A Dual specificity protei 99.6 1.7E-16 5.8E-21 141.8 4.4 110 270-398 16-144 (154)
52 3op3_A M-phase inducer phospha 99.6 6.8E-16 2.3E-20 148.4 7.5 108 270-402 57-183 (216)
53 3ntd_A FAD-dependent pyridine 99.6 1.2E-15 4E-20 161.8 9.0 97 266-396 469-565 (565)
54 1okg_A Possible 3-mercaptopyru 99.6 4E-16 1.4E-20 160.6 3.5 105 285-403 173-296 (373)
55 3tg1_B Dual specificity protei 99.6 2.9E-15 1E-19 135.7 8.3 108 270-396 11-143 (158)
56 3utn_X Thiosulfate sulfurtrans 99.6 4.8E-15 1.6E-19 150.6 9.4 122 270-403 28-162 (327)
57 3utn_X Thiosulfate sulfurtrans 99.6 6.6E-15 2.3E-19 149.6 9.4 190 188-398 70-319 (327)
58 3ics_A Coenzyme A-disulfide re 99.6 6.5E-15 2.2E-19 157.6 9.9 98 266-396 485-582 (588)
59 2eg4_A Probable thiosulfate su 99.5 4.1E-15 1.4E-19 141.7 6.7 99 283-403 3-105 (230)
60 1whb_A KIAA0055; deubiqutinati 99.5 2.4E-14 8.1E-19 129.7 7.9 116 270-404 15-149 (157)
61 2gwf_A Ubiquitin carboxyl-term 99.5 4.9E-14 1.7E-18 128.1 9.5 114 270-402 20-152 (157)
62 3r2u_A Metallo-beta-lactamase 99.4 7.8E-15 2.7E-19 154.4 0.0 87 277-394 379-465 (466)
63 3tp9_A Beta-lactamase and rhod 99.3 5.2E-13 1.8E-17 139.9 6.4 102 269-403 272-374 (474)
64 3r2u_A Metallo-beta-lactamase 98.9 7.6E-10 2.6E-14 116.4 6.4 80 284-393 294-375 (466)
65 2f46_A Hypothetical protein; s 96.0 0.014 4.9E-07 51.9 7.2 104 270-400 28-145 (156)
66 2nt2_A Protein phosphatase sli 74.4 8 0.00028 33.0 7.1 27 353-379 80-109 (145)
67 3rgo_A Protein-tyrosine phosph 72.5 2.8 9.5E-05 36.0 3.7 27 353-379 88-117 (157)
68 2r0b_A Serine/threonine/tyrosi 72.4 10 0.00034 32.6 7.3 27 353-379 89-118 (154)
69 4erc_A Dual specificity protei 69.2 12 0.00042 31.6 7.1 90 273-379 24-116 (150)
70 3h8v_A Ubiquitin-like modifier 67.9 1.7 6E-05 43.1 1.5 48 189-237 187-239 (292)
71 2e0t_A Dual specificity phosph 67.0 7.2 0.00025 33.4 5.2 27 353-379 84-113 (151)
72 2hcm_A Dual specificity protei 65.9 14 0.00047 32.3 6.9 27 353-379 88-117 (164)
73 1xri_A AT1G05000; structural g 60.6 7.3 0.00025 33.4 4.0 27 353-379 91-119 (151)
74 1yz4_A DUSP15, dual specificit 57.9 17 0.00058 31.5 5.9 27 353-379 83-112 (160)
75 1wrm_A Dual specificity phosph 54.4 29 0.00099 30.3 6.9 27 353-379 82-111 (165)
76 1v8c_A MOAD related protein; r 53.9 2 7E-05 39.2 -0.8 25 287-323 122-146 (168)
77 1zzw_A Dual specificity protei 53.6 25 0.00086 29.9 6.2 27 353-379 82-111 (149)
78 2img_A Dual specificity protei 53.1 33 0.0011 28.7 6.9 18 353-370 88-106 (151)
79 3ezz_A Dual specificity protei 52.6 19 0.00065 30.5 5.3 27 353-379 80-109 (144)
80 3rz2_A Protein tyrosine phosph 50.7 38 0.0013 30.3 7.2 27 270-296 46-72 (189)
81 2esb_A Dual specificity protei 48.1 29 0.00098 31.2 6.0 27 353-379 96-125 (188)
82 2j16_A SDP-1, tyrosine-protein 47.8 24 0.00082 32.1 5.4 27 353-379 116-145 (182)
83 1ywf_A Phosphotyrosine protein 47.5 64 0.0022 31.5 8.8 30 270-300 54-83 (296)
84 3h5n_A MCCB protein; ubiquitin 47.3 8.6 0.00029 38.7 2.5 46 189-237 258-316 (353)
85 3rui_A Ubiquitin-like modifier 47.3 6.5 0.00022 39.9 1.6 48 189-237 193-242 (340)
86 2g6z_A Dual specificity protei 47.2 40 0.0014 31.4 6.9 27 353-379 82-111 (211)
87 2wgp_A Dual specificity protei 46.5 26 0.0009 31.6 5.4 27 353-379 102-131 (190)
88 3s4e_A Dual specificity protei 45.7 33 0.0011 29.1 5.7 27 353-379 80-109 (144)
89 2o8n_A APOA-I binding protein; 45.2 34 0.0012 33.3 6.3 45 355-400 80-137 (265)
90 3f81_A Dual specificity protei 45.0 69 0.0024 28.1 7.9 26 354-379 115-143 (183)
91 1jzt_A Hypothetical 27.5 kDa p 42.3 38 0.0013 32.4 6.0 45 355-400 59-117 (246)
92 2oud_A Dual specificity protei 42.0 46 0.0016 29.4 6.3 27 353-379 86-115 (177)
93 3emu_A Leucine rich repeat and 41.0 29 0.001 30.4 4.7 27 353-379 86-115 (161)
94 2jgn_A DBX, DDX3, ATP-dependen 40.5 21 0.00073 31.8 3.8 38 352-390 44-81 (185)
95 3d3k_A Enhancer of mRNA-decapp 39.9 28 0.00094 33.7 4.7 30 355-385 86-118 (259)
96 4fak_A Ribosomal RNA large sub 39.8 38 0.0013 30.8 5.3 45 346-390 66-115 (163)
97 3to5_A CHEY homolog; alpha(5)b 36.8 41 0.0014 28.8 4.9 43 352-394 10-52 (134)
98 1t5i_A C_terminal domain of A 36.8 42 0.0014 29.4 5.1 37 353-390 30-66 (172)
99 3d3j_A Enhancer of mRNA-decapp 36.7 32 0.0011 34.1 4.7 30 355-385 133-165 (306)
100 2hjv_A ATP-dependent RNA helic 36.0 36 0.0012 29.4 4.4 36 353-389 34-69 (163)
101 1rxd_A Protein tyrosine phosph 35.4 75 0.0026 26.7 6.4 28 352-379 94-123 (159)
102 1fpz_A Cyclin-dependent kinase 35.2 50 0.0017 30.0 5.5 24 353-376 132-157 (212)
103 3rss_A Putative uncharacterize 34.8 38 0.0013 35.9 5.1 47 353-400 51-110 (502)
104 4gsl_A Ubiquitin-like modifier 33.6 17 0.00057 39.8 2.2 48 189-237 485-534 (615)
105 2rb4_A ATP-dependent RNA helic 32.3 31 0.0011 30.1 3.4 36 353-389 33-68 (175)
106 3s4o_A Protein tyrosine phosph 31.5 93 0.0032 26.3 6.3 25 353-377 108-134 (167)
107 1fuk_A Eukaryotic initiation f 28.9 43 0.0015 28.8 3.7 36 353-389 29-64 (165)
108 3ghg_B Fibrinogen beta chain; 28.6 62 0.0021 34.1 5.4 103 68-179 72-181 (461)
109 1zud_1 Adenylyltransferase THI 27.5 15 0.00052 34.9 0.5 30 189-220 167-196 (251)
110 3eaq_A Heat resistant RNA depe 27.3 60 0.002 29.5 4.5 36 353-389 30-65 (212)
111 3zbh_A ESXA; unknown function, 26.9 17 0.00059 28.7 0.7 47 90-136 18-64 (99)
112 4f0j_A Probable hydrolytic enz 26.9 1.1E+02 0.0039 27.1 6.3 85 353-443 44-132 (315)
113 2q05_A Late protein H1, dual s 26.8 1.2E+02 0.004 27.3 6.4 27 353-379 124-153 (195)
114 1jw9_B Molybdopterin biosynthe 26.6 12 0.00041 35.6 -0.4 45 189-236 170-214 (249)
115 4ioe_A Secreted protein ESXB; 25.4 21 0.00073 28.0 0.9 47 89-135 17-63 (93)
116 1tvm_A PTS system, galactitol- 24.9 57 0.002 27.2 3.6 28 353-380 20-52 (113)
117 3gwk_C SAG1039, putative uncha 24.5 15 0.0005 29.4 -0.2 63 89-151 16-78 (98)
118 1to0_A Hypothetical UPF0247 pr 23.1 96 0.0033 28.2 5.0 43 348-390 64-111 (167)
119 2i4i_A ATP-dependent RNA helic 23.0 64 0.0022 31.4 4.1 38 352-390 274-311 (417)
120 2cwd_A Low molecular weight ph 21.5 59 0.002 28.8 3.2 41 353-393 3-49 (161)
121 2hxp_A Dual specificity protei 21.4 77 0.0026 27.2 3.9 27 353-379 84-113 (155)
122 3rof_A Low molecular weight pr 21.1 54 0.0019 29.3 2.9 38 355-392 7-49 (158)
123 1u2p_A Ptpase, low molecular w 20.6 57 0.0019 28.9 2.9 38 355-392 5-48 (163)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.89 E-value=1.5e-23 Score=179.21 Aligned_cols=101 Identities=21% Similarity=0.367 Sum_probs=90.2
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
.+||++|+.+++.++++++|||||++.||..||||||+ |+|+.++...+.+
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcc--------cCcccchhhhhhh---------------------
Confidence 46999999999877778999999999999999999999 9998877655443
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccc
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~ 401 (479)
++++++||+||++|.||..+++.|+..||++ ++|.||+.+|+++|+|+++
T Consensus 53 -l~~~~~ivv~C~~G~rS~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGIDA-VNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTCEE-EEETTHHHHHCSSSCBCCC
T ss_pred -hcCCCeEEEECCCCHHHHHHHHHHHHcCCCE-EEecChHHHHHHCCCccee
Confidence 3789999999999999999999999999964 5799999999999999875
No 2
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.88 E-value=4.2e-23 Score=173.44 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=89.2
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
..|+++++.++++++++++|||||++.||..||||||+ |+|+.++...+.+
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAE--------TIPMNSIPDNLNY--------------------- 52 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHh---------------------
Confidence 36899999999866678999999999999999999999 9998777654432
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCc
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV 399 (479)
++++++||+||++|.||..+++.|+..|| +|++|+||+.+|.++|+|+
T Consensus 53 -l~~~~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 53 -FNDNETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp -SCTTSEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred -CCCCCcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 37899999999999999999999999999 9999999999999999986
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.88 E-value=6.8e-23 Score=172.78 Aligned_cols=101 Identities=22% Similarity=0.386 Sum_probs=90.6
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
..|+++++.+++.++++++|||||++.||..||||||+ |+|+.++...+..
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh---------------------
Confidence 36899999998866678999999999999999999999 9998777654432
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccc
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~ 401 (479)
++++++||+||++|.||..+++.|+..|| +|++|+||+.+|.++|+|+++
T Consensus 53 -l~~~~~iv~yC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred -CCCCCeEEEECCCChHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 37899999999999999999999999999 999999999999999999864
No 4
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.86 E-value=5.5e-22 Score=169.46 Aligned_cols=102 Identities=24% Similarity=0.318 Sum_probs=88.9
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhh
Q 011705 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (479)
Q Consensus 269 ~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~L 348 (479)
...|+++++.+++. + ++|||||++.||..||||||+ |+|+.++...+..
T Consensus 3 ~~~is~~el~~~l~-~--~~iiDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~-------------------- 51 (108)
T 3gk5_A 3 YRSINAADLYENIK-A--YTVLDVREPFELIFGSIANSI--------NIPISELREKWKI-------------------- 51 (108)
T ss_dssp CCEECHHHHHHTTT-T--CEEEECSCHHHHTTCBCTTCE--------ECCHHHHHHHGGG--------------------
T ss_pred ccEeCHHHHHHHHc-C--CEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh--------------------
Confidence 35799999999984 2 999999999999999999999 9998766543332
Q ss_pred ccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 349 k~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
++++++||+||++|.||..+++.|+.+|| +|++|+||+.+|.++|+|+.+..+
T Consensus 52 --l~~~~~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~ 104 (108)
T 3gk5_A 52 --LERDKKYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH 104 (108)
T ss_dssp --SCTTSCEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred --CCCCCeEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence 37889999999999999999999999999 999999999999999999987654
No 5
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.85 E-value=1e-21 Score=166.93 Aligned_cols=102 Identities=21% Similarity=0.305 Sum_probs=89.2
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
..|+++++.+++. +++.+|||||++.||..||||||+ |+|+.++...+.+
T Consensus 5 ~~i~~~~l~~~~~-~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 54 (108)
T 1gmx_A 5 ECINVADAHQKLQ-EKEAVLVDIRDPQSFAMGHAVQAF--------HLTNDTLGAFMRD--------------------- 54 (108)
T ss_dssp EEECHHHHHHHHH-TTCCEEEECSCHHHHHHCEETTCE--------ECCHHHHHHHHHH---------------------
T ss_pred cccCHHHHHHHHh-CCCCEEEEcCCHHHHHhCCCccCE--------eCCHHHHHHHHHh---------------------
Confidence 4689999999986 456999999999999999999999 9998665443322
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
++++++||+||++|.||..+++.|+..||++|++|+||+.+|.+. +|++.+.
T Consensus 55 -l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 55 -NDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp -SCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred -cCCCCCEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccccc
Confidence 278899999999999999999999999999999999999999999 9998643
No 6
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.4e-21 Score=172.84 Aligned_cols=115 Identities=18% Similarity=0.201 Sum_probs=94.2
Q ss_pred CccCHHHHHHHHhC-CCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhh
Q 011705 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (479)
Q Consensus 270 g~ISp~El~elL~~-~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~L 348 (479)
..|+++++.+++.+ +++++|||||++.||..||||||+ |+|+.++.... ..++..+.+.+...+
T Consensus 23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~l~~~~---~~~~~~~~~~~~~~~---- 87 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASI--------NVPYRSHPDAF---ALDPLEFEKQIGIPK---- 87 (139)
T ss_dssp EECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCE--------ECCTTTCTTGG---GSCHHHHHHHHSSCC----
T ss_pred ceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcE--------EcCHHHhhhhc---cCCHHHHHHHHhccC----
Confidence 47999999999864 367999999999999999999999 89987765332 223333443332222
Q ss_pred ccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccc
Q 011705 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (479)
Q Consensus 349 k~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~ 401 (479)
++++++||+||++|.||..+++.|+.+||++|++|+||+.+|.+.|+|+..
T Consensus 88 --~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 88 --PDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp --CCTTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred --CCCCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 378999999999999999999999999999999999999999999999764
No 7
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.84 E-value=2.2e-21 Score=172.70 Aligned_cols=108 Identities=22% Similarity=0.359 Sum_probs=93.2
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhh-cC--CCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHh
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRER-DG--IPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 346 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~-gH--IPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs 346 (479)
..|+++++.+++.++++++|||||++.||.. || ||||+ |+|+.++..... +
T Consensus 23 ~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAi--------nip~~~l~~~~~--------~---------- 76 (137)
T 1qxn_A 23 VMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYK--------HMSRGKLEPLLA--------K---------- 76 (137)
T ss_dssp EEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEE--------ECCTTTSHHHHH--------H----------
T ss_pred cccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCE--------EcchHHhhhHHh--------h----------
Confidence 5799999999996356799999999999999 99 99999 999876643110 1
Q ss_pred hhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccccc
Q 011705 347 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (479)
Q Consensus 347 ~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p~ 405 (479)
..++++++||+||++|.||..+++.|+..||++|++|+||+.+|.++|+|+..+.+.
T Consensus 77 --~~l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 133 (137)
T 1qxn_A 77 --SGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSHH 133 (137)
T ss_dssp --HCCCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCCC
T ss_pred --ccCCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccccccc
Confidence 123789999999999999999999999999999999999999999999999887663
No 8
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.84 E-value=4.1e-21 Score=169.31 Aligned_cols=113 Identities=22% Similarity=0.313 Sum_probs=90.4
Q ss_pred CccCHHHHHHHHhC-CCCcEEEEcCChhhhhh-cCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhh
Q 011705 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRER-DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRN 347 (479)
Q Consensus 270 g~ISp~El~elL~~-~~~~vLIDVRs~~Ef~~-gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~ 347 (479)
..|+++++.+++.+ +++++|||||++.||.. ||||||+ |+|+.++....... .+...
T Consensus 22 ~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------~ip~~~l~~~~~~~--~~~~~----------- 80 (139)
T 2hhg_A 22 ETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSF--------SCTRGMLEFWIDPQ--SPYAK----------- 80 (139)
T ss_dssp EEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCE--------ECCGGGHHHHHCTT--STTCC-----------
T ss_pred CccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeE--------ECChHHHHHhcCcc--chhhh-----------
Confidence 57999999999963 46799999999999999 9999999 99987664332210 00000
Q ss_pred hccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 348 LKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 348 Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
..++++++||+||++|.||..+++.|+.+||++|++|+||+.+|.++|+|++.+.+
T Consensus 81 -~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 81 -PIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp -GGGGSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred -ccCCCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 11268899999999999999999999999999999999999999999999987654
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.84 E-value=3.4e-21 Score=172.62 Aligned_cols=105 Identities=13% Similarity=0.168 Sum_probs=90.4
Q ss_pred ccCHHHHHHHHhCC-CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 271 DLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 271 ~ISp~El~elL~~~-~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
.|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++......
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~--------------------- 51 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS--------------------- 51 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCE--------ECCGGGHHHHHHT---------------------
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCE--------EcCHHHHHHHHHh---------------------
Confidence 38999999998643 46999999999999999999999 9998766543321
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
.++++++||+||.+|.||..+++.|+..||++|++|+||+.+|.++|+|++...+
T Consensus 52 ~l~~~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 52 SLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp TSCTTSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred cCCCCCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 1378899999999999999999999999999999999999999999999987653
No 10
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.84 E-value=2.9e-21 Score=164.21 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=79.3
Q ss_pred HHHHHHhC-CCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhccCCCC
Q 011705 276 STLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDR 354 (479)
Q Consensus 276 El~elL~~-~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd 354 (479)
|+.+++.. +++++|||||++.||..||||||+ |+|+.++...... .++++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~---------------------~l~~~ 52 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS---------------------SLEKS 52 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCE--------ECCGGGHHHHHHH---------------------HSCTT
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCE--------eCCHHHHHHHHHh---------------------cCCCC
Confidence 56666643 346999999999999999999999 9998766543211 13788
Q ss_pred cEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 355 SKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 355 ~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
++||+||.+|.||..+++.|+..||++|++|+||+.+|+++|+|+.+..+
T Consensus 53 ~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~ 102 (106)
T 3hix_A 53 RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH 102 (106)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred CeEEEEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999987544
No 11
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.82 E-value=1.7e-20 Score=182.40 Aligned_cols=114 Identities=15% Similarity=0.120 Sum_probs=97.4
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhhh--------hcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHH
Q 011705 271 DLSPKSTLELLRGKENAVLIDVRHEDLRE--------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVRs~~Ef~--------~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~a 342 (479)
.|+++++.+++. +++.+|||||++.||. .||||||+ |+|+.++......+... +++++.+..
T Consensus 148 ~i~~~~l~~~l~-~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~--------~ip~~~~~~~~~~~~~~-~~l~~~~~~ 217 (271)
T 1e0c_A 148 TASRDYLLGRLG-AADLAIWDARSPQEYRGEKVLAAKGGHIPGAV--------NFEWTAAMDPSRALRIR-TDIAGRLEE 217 (271)
T ss_dssp BCCHHHHHHHTT-CTTEEEEECSCHHHHTTSSCCSSSCSBCTTCE--------ECCGGGGEEGGGTTEEC-TTHHHHHHH
T ss_pred cccHHHHHHHhc-CCCcEEEEcCChhhcCCccCCCCcCCcCCCce--------eccHHHhCCCCCCCCCH-HHHHHHHHH
Confidence 368999999884 5679999999999999 99999999 99987776543333333 667776766
Q ss_pred HHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHc-CCCcc
Q 011705 343 AVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKE-GLRIK 400 (479)
Q Consensus 343 lGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aa-GLPV~ 400 (479)
+++ +++++||+||++|.||..+++.|+.+||++|++|+||+.+|.+. |+|++
T Consensus 218 ~~~------~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~ 270 (271)
T 1e0c_A 218 LGI------TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270 (271)
T ss_dssp TTC------CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred cCC------CCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCc
Confidence 666 78999999999999999999999999999999999999999998 99986
No 12
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.82 E-value=1.9e-20 Score=168.09 Aligned_cols=105 Identities=17% Similarity=0.203 Sum_probs=91.1
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccc-hhHhhhcCchhhhHHHHHHHHhh
Q 011705 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVIRN 347 (479)
Q Consensus 270 g~ISp~El~elL~~~-~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~-~l~~ll~~~~~L~~ll~alGIs~ 347 (479)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++.. .+.
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~-------------------- 67 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAI--------SIPGNKINEDTTK-------------------- 67 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCE--------ECCGGGCSTTTTT--------------------
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCE--------ECCHHHHhHHHHh--------------------
Confidence 369999999999654 47999999999999999999999 999877653 221
Q ss_pred hccCCCCcEEEEEeCCC--chHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccccc
Q 011705 348 LKIVQDRSKVIVMDADG--TRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (479)
Q Consensus 348 Lk~~~kd~~IVVyC~sG--~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p~ 405 (479)
.++++++||+||++| .||..+++.|+..|| +|++|+||+.+|.++|+|++...+.
T Consensus 68 --~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~~ 124 (144)
T 3nhv_A 68 --RLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLGA 124 (144)
T ss_dssp --TCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSGG
T ss_pred --hCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCCC
Confidence 237899999999999 699999999999999 6999999999999999999987653
No 13
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.82 E-value=1.3e-20 Score=165.50 Aligned_cols=111 Identities=22% Similarity=0.256 Sum_probs=90.3
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
..|+++++.+++. ++++|||||++.||..||||||+ |+|+..+... ..+++++++++.+ +
T Consensus 18 ~~is~~e~~~~l~--~~~~lIDvR~~~e~~~ghIpgAi--------nip~~~~~~~--~~~~~~~~~~~~~--------~ 77 (129)
T 1tq1_A 18 SSVSVTVAHDLLL--AGHRYLDVRTPEEFSQGHACGAI--------NVPYMNRGAS--GMSKNTDFLEQVS--------S 77 (129)
T ss_dssp EEEEHHHHHHHHH--HTCCEEEESCHHHHHHCCBTTBE--------ECCSCCCSTT--TCCCTTTHHHHHT--------T
T ss_pred cccCHHHHHHHhc--CCCEEEECCCHHHHhcCCCCCcE--------ECcHhhcccc--cccCCHHHHHHHH--------h
Confidence 5799999999985 56899999999999999999999 8887544321 1223333333211 1
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcc
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~ 400 (479)
.++++++||+||++|.||..+++.|+..||++|++|+||+.+|.++|+|++
T Consensus 78 ~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 78 HFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp TCCTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred hCCCCCeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 247889999999999999999999999999999999999999999999985
No 14
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.81 E-value=1.8e-20 Score=163.49 Aligned_cols=102 Identities=17% Similarity=0.264 Sum_probs=88.3
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEcCChhhh-hhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhh
Q 011705 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRN 347 (479)
Q Consensus 270 g~ISp~El~elL~~~-~~~vLIDVRs~~Ef-~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~ 347 (479)
..|+++++.+++.++ ++++|||||++.|| ..||||||+ |+|+.++...+..
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------nip~~~l~~~~~~------------------- 67 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAI--------AMPAKDLATRIGE------------------- 67 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCE--------ECCHHHHHHHGGG-------------------
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCE--------ECCHHHHHHHHhc-------------------
Confidence 369999999998644 35999999999998 999999999 9998666543322
Q ss_pred hccCCCCcEEEEEeCCCch--HHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccc
Q 011705 348 LKIVQDRSKVIVMDADGTR--SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (479)
Q Consensus 348 Lk~~~kd~~IVVyC~sG~r--S~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~ 402 (479)
++++++||+||++|.| |..+++.|+..||+ |++|+||+.+|++.|+|+.+.
T Consensus 68 ---l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 68 ---LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp ---SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred ---CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 3789999999999998 89999999999996 999999999999999998764
No 15
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.81 E-value=3.7e-20 Score=192.38 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=153.0
Q ss_pred cchhHHHHHHHHHHhhhhcccCcceE---------EEeeccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHH
Q 011705 159 TVAAVDVLRNTIVALEESMTNGASFV---------VYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIE 229 (479)
Q Consensus 159 ~~~~~d~l~~~~~~~~~~~~~~~~~~---------~~~~G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~qv~~~le 229 (479)
+-|+.+||++.+..-+-.+.|.|+.. .|.-||++..++-++.. +. +.. ...|+
T Consensus 4 ~~is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~-l~------------lp~-----~~~f~ 65 (423)
T 2wlr_A 4 AELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASW-LD------------KMS-----TEQLN 65 (423)
T ss_dssp CCCCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGG-GG------------GCC-----HHHHH
T ss_pred cccCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHH-hc------------CCC-----HHHHH
Confidence 34677888888866556788998765 35578999887776642 21 111 23345
Q ss_pred HHHHhcCCCCCCCcchhhHHhhhhhhHHHHHHHHHhcCC----------------------CCccCHHHHHHHHhC----
Q 011705 230 GLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGGY----------------------SGDLSPKSTLELLRG---- 283 (479)
Q Consensus 230 ~l~~~lg~~~~~PvL~~~v~~g~~~al~l~~~l~~~~~~----------------------~g~ISp~El~elL~~---- 283 (479)
.....+|+.++++|+++..- + .+..++|.+ +.-++ ...++++++.+++..
T Consensus 66 ~~~~~lgi~~~~~vVvy~~~-~--~a~r~~w~l-~~~G~~~V~vl~Gg~~~~g~~~~~~~~~~~i~~~~l~~~~~~~~~~ 141 (423)
T 2wlr_A 66 AWIKQHNLKTDAPVALYGND-K--DVDAVKTRL-QKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVT 141 (423)
T ss_dssp HHHHHTTCCTTSCEEEESCH-H--HHHHHHHHH-HHTTCCCEEEBTTTTSCGGGCBCCTTGGGEECHHHHHHHHTTCCCT
T ss_pred HHHHHcCCCCCCeEEEECCC-C--CHHHHHHHH-HHcCCceeEeccchhhcCCCcccCCCCCcccCHHHHHHHhhccccc
Confidence 55566899999999754221 1 111222222 11111 124788899888853
Q ss_pred ---CCCcEEEEcC--ChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhccCCCCcEEE
Q 011705 284 ---KENAVLIDVR--HEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVI 358 (479)
Q Consensus 284 ---~~~~vLIDVR--s~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd~~IV 358 (479)
+++.+|||+| ++.||..||||||+ |+|+.++.......+++++.+++.+.++|+ +++++||
T Consensus 142 ~~~~~~~~liDvR~~~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~l~~~~~~~gi------~~~~~iv 207 (423)
T 2wlr_A 142 AKPAGDWKVIEAAWGAPKLYLISHIPGAD--------YIDTNEVESEPLWNKVSDEQLKAMLAKHGI------RHDTTVI 207 (423)
T ss_dssp TCCSSCEEEEEEESSSCSHHHHCBCTTCE--------EEEGGGTEETTTTEECCHHHHHHHHHHTTC------CTTSEEE
T ss_pred cccCCCeEEEEecCCCchhhccCcCCCcE--------EcCHHHhccCCCCCCCCHHHHHHHHHHcCC------CCCCeEE
Confidence 3578999999 99999999999999 888877654223456777888888887777 7899999
Q ss_pred EEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccc
Q 011705 359 VMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (479)
Q Consensus 359 VyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~ 402 (479)
+||++|.||..+++.|+.+||++|++|+||+.+|...|+|++.+
T Consensus 208 vyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g 251 (423)
T 2wlr_A 208 LYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERG 251 (423)
T ss_dssp EECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCS
T ss_pred EECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccC
Confidence 99999999999999999999999999999999999999999874
No 16
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.80 E-value=8.3e-20 Score=177.58 Aligned_cols=120 Identities=17% Similarity=0.209 Sum_probs=104.1
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccch---hHhhhcCchhhhHHHHHHHHh
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTLTAAVIR 346 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~---l~~ll~~~~~L~~ll~alGIs 346 (479)
..|+++++.+++. +++++|||||++.||..||||||+ |+|+.++... ...++++++.+++.+..+|+
T Consensus 9 ~~is~~~l~~~l~-~~~~~iiDvR~~~ey~~ghIpgA~--------~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi- 78 (271)
T 1e0c_A 9 LVIEPADLQARLS-APELILVDLTSAARYAEGHIPGAR--------FVDPKRTQLGQPPAPGLQPPREQLESLFGELGH- 78 (271)
T ss_dssp SEECHHHHHTTTT-CTTEEEEECSCHHHHHHCBSTTCE--------ECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC-
T ss_pred ceeeHHHHHHhcc-CCCeEEEEcCCcchhhhCcCCCCE--------ECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC-
Confidence 4799999999984 568999999999999999999998 8887665432 33456677778888888887
Q ss_pred hhccCCCCcEEEEEeCCCc-hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 347 NLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 347 ~Lk~~~kd~~IVVyC~sG~-rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
+++++|||||++|. +|.++++.|+.+||++|++|+||+.+|+++|+|+..+.+
T Consensus 79 -----~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~ 132 (271)
T 1e0c_A 79 -----RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP 132 (271)
T ss_dssp -----CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred -----CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC
Confidence 78999999999998 999999999999999999999999999999999987654
No 17
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.80 E-value=2.5e-20 Score=184.48 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=97.6
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhh------------hhcCCCCccccccccccccCcccccchhHhhhcCchhhhH
Q 011705 271 DLSPKSTLELLRGKENAVLIDVRHEDLR------------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDD 338 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVRs~~Ef------------~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ 338 (479)
.++++++.+++. +++++|||||++.|| +.||||||+ |+|+.++..... .+++++++.+
T Consensus 161 ~i~~~e~~~~~~-~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~--------nip~~~l~~~~~-~~~~~~~l~~ 230 (296)
T 1rhs_A 161 LKTYEQVLENLE-SKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSV--------NMPFMNFLTEDG-FEKSPEELRA 230 (296)
T ss_dssp EECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCE--------ECCGGGGBCTTS-CBCCHHHHHH
T ss_pred EEcHHHHHHHhc-CCCceEEeCCchhhcccccCCcccCCCcCccCCCCE--------eecHHHhcCCCC-cCCCHHHHHH
Confidence 478999999885 467899999999999 889999999 999877754322 2344555666
Q ss_pred HHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHH-cCCCccccc
Q 011705 339 TLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELK 403 (479)
Q Consensus 339 ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~a-aGLPV~~~~ 403 (479)
.+...++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .++|++.+.
T Consensus 231 ~~~~~~~------~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 290 (296)
T 1rhs_A 231 MFEAKKV------DLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQ 290 (296)
T ss_dssp HHHHTTC------CTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred HHHHcCC------CCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence 5655555 7899999999999999999999999999999999999999998 899998754
No 18
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.80 E-value=1e-20 Score=185.04 Aligned_cols=113 Identities=21% Similarity=0.251 Sum_probs=87.2
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhh-----------hhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHH
Q 011705 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (479)
Q Consensus 272 ISp~El~elL~~~~~~vLIDVRs~~Ef-----------~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll 340 (479)
|+++++.+++. +++++|||||++.|| ..||||||+ |+|+.++.. ...+++++.+.+.+
T Consensus 154 i~~~e~~~~~~-~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~--------nip~~~~~~--~~~~~~~~~l~~~~ 222 (280)
T 1urh_A 154 VKVTDVLLASH-ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGAL--------NVPWTELVR--EGELKTTDELDAIF 222 (280)
T ss_dssp CCHHHHHHHHH-HTCSEEEECSCHHHHSSCCCC----CCSSSCTTCE--------ECCGGGGBS--SSSBCCHHHHHHHH
T ss_pred EcHHHHHHHhc-CCCcEEEeCCchhhcccccCCCCCCCcCccCCCce--------EeeHHHhhc--CCccCCHHHHHHHH
Confidence 89999999985 467899999999999 689999999 999877764 12234455566655
Q ss_pred HHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHH-cCCCccc
Q 011705 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKE 401 (479)
Q Consensus 341 ~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~a-aGLPV~~ 401 (479)
...++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .++|+++
T Consensus 223 ~~~~~------~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 223 FGRGV------SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp HTTTC------CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred HHcCC------CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 55555 7899999999999999999999999999999999999999987 5999875
No 19
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.80 E-value=1.3e-20 Score=156.42 Aligned_cols=92 Identities=21% Similarity=0.222 Sum_probs=75.8
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhcc
Q 011705 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~ 350 (479)
.|+++++.+++.+ +++|||||++.||..||||||+ |+|+.++...+. .
T Consensus 3 ~is~~~l~~~~~~--~~~liDvR~~~e~~~ghi~gAi--------~ip~~~l~~~~~----------------------~ 50 (94)
T 1wv9_A 3 KVRPEELPALLEE--GVLVVDVRPADRRSTPLPFAAE--------WVPLEKIQKGEH----------------------G 50 (94)
T ss_dssp EECGGGHHHHHHT--TCEEEECCCC--CCSCCSSCCE--------ECCHHHHTTTCC----------------------C
T ss_pred cCCHHHHHHHHHC--CCEEEECCCHHHHhcccCCCCE--------ECCHHHHHHHHH----------------------h
Confidence 5899999999863 7899999999999999999999 999866654322 2
Q ss_pred CCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcC
Q 011705 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (479)
Q Consensus 351 ~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaG 396 (479)
+++ ++||+||++|.||..+++.|+..||+ |++|+||+.+|.++|
T Consensus 51 l~~-~~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 51 LPR-RPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp CCS-SCEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred CCC-CCEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 367 89999999999999999999999998 999999999998765
No 20
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.80 E-value=3.6e-20 Score=166.07 Aligned_cols=117 Identities=29% Similarity=0.419 Sum_probs=88.1
Q ss_pred CCCccCHHHHHHHHhCCCCcEEEEcCChhhhhh-cCC------CCccccccccccccCcccccchhHhhhcCchh---hh
Q 011705 268 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRER-DGI------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRE---LD 337 (479)
Q Consensus 268 ~~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~-gHI------PGA~~av~~~~~nIPl~el~~~l~~ll~~~~~---L~ 337 (479)
|.+.|+++++.+++.++++++|||||++.||.. ||| |||+ |+|+.+.... .++.+ +.
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv--------~ip~~~~~~~-----~~~~~~~~l~ 69 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVV--------YVEWATSDGT-----HNDNFLAELR 69 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCE--------ECCSBCTTSC-----BCTTHHHHHH
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcE--------Eeeeeccccc-----cCHHHHHHHH
Confidence 456799999999986446899999999999997 999 9998 8887652110 01111 22
Q ss_pred HHHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccH------------HHHHHcCCCccccc
Q 011705 338 DTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF------------QSWVKEGLRIKELK 403 (479)
Q Consensus 338 ~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~------------~aW~aaGLPV~~~~ 403 (479)
+.+.+.|+ +++++|||||++|.||..+++.|+.+||++|++|+||+ .+|+++|+|++...
T Consensus 70 ~~l~~~~~------~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 70 DRIPADAD------QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp HHCC-------------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred HHHhhccC------CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 21222344 78899999999999999999999999999999999999 68999999998643
No 21
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.79 E-value=1.2e-19 Score=156.52 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=86.3
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhcc
Q 011705 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~ 350 (479)
+|+++++.+++.++++++|||||++.||..||||||+ |+|+.++......++ ..+.+.+.... .-..
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~---~~~~~~l~~~~--~~~~ 68 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHAL--------HIPLKHLERRDAESL---KLLKEAIWEEK--QGTQ 68 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSE--------ECCHHHHHTTCHHHH---HHHHHHHHHHH--TTC-
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCce--------eCChHHHhhhhhhhH---HHHHHHHhhhc--cccc
Confidence 5899999999975557999999999999999999999 999877655433321 00111111100 0001
Q ss_pred CCCCcEEEEEeCCCchHHHHHHHHHHc------cCCCEEEecccHHHHHHcCCC
Q 011705 351 VQDRSKVIVMDADGTRSKGIARSLRKL------GVMRAFLVQGGFQSWVKEGLR 398 (479)
Q Consensus 351 ~~kd~~IVVyC~sG~rS~~AA~~L~~~------Gf~nV~vL~GG~~aW~aaGLP 398 (479)
.+++++||+||++|.||..+++.|+.. ||.+|++|+||+.+|.+...|
T Consensus 69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 69 EGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp --CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 145679999999999999999999998 699999999999999987765
No 22
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.79 E-value=1.6e-20 Score=160.63 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=83.8
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhcc
Q 011705 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~ 350 (479)
.|+++++ ++++++|||||++.||..||||||+ |+|+.++...+.. .++
T Consensus 6 ~is~~el-----~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~--------------~~~----- 53 (110)
T 2k0z_A 6 AISLEEV-----NFNDFIVVDVRELDEYEELHLPNAT--------LISVNDQEKLADF--------------LSQ----- 53 (110)
T ss_dssp EEETTTC-----CGGGSEEEEEECHHHHHHSBCTTEE--------EEETTCHHHHHHH--------------HHS-----
T ss_pred eeCHHHh-----ccCCeEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh--------------ccc-----
Confidence 4666665 2457899999999999999999999 8998766543321 223
Q ss_pred CCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 351 ~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
+++++||+||++|.||..+++.|+..||++ ++|+||+.+|.++|+|++.+.
T Consensus 54 -~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 54 -HKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp -CSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred -CCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence 789999999999999999999999999999 999999999999999998754
No 23
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.78 E-value=7e-20 Score=182.68 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=96.7
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhh-----------hhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHH
Q 011705 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (479)
Q Consensus 272 ISp~El~elL~~~~~~vLIDVRs~~Ef-----------~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll 340 (479)
++++++.+++. +++++|||||++.|| +.||||||+ |+|+.++..... .+++++++.+.+
T Consensus 177 i~~~e~~~~~~-~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAi--------niP~~~l~~~~~-~~~~~~~l~~~~ 246 (302)
T 3olh_A 177 KTYEDIKENLE-SRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTV--------NIPFTDFLSQEG-LEKSPEEIRHLF 246 (302)
T ss_dssp ECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCE--------ECCGGGGBCSSS-CBCCHHHHHHHH
T ss_pred ecHHHHHHhhc-CCCcEEEecCCHHHccccccCCCcCCcCccCCCce--------ecCHHHhcCCCC-ccCCHHHHHHHH
Confidence 67889988885 467899999999999 789999999 999877755432 345667777777
Q ss_pred HHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCc
Q 011705 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (479)
Q Consensus 341 ~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV 399 (479)
.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+.|+|.
T Consensus 247 ~~~~~------~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 247 QEKKV------DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHTTC------CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HhcCC------CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 77666 789999999999999999999999999999999999999999999874
No 24
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.78 E-value=2.3e-19 Score=175.52 Aligned_cols=120 Identities=16% Similarity=0.210 Sum_probs=102.4
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcC----------ChhhhhhcCCCCccccccccccccCcccccch---hHhhhcCchhh
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVR----------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGREL 336 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVR----------s~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~---l~~ll~~~~~L 336 (479)
..|+++++.+++. +++++||||| ++.||..||||||+ |+|+.++... ...++++++.+
T Consensus 4 ~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi--------~ip~~~l~~~~~~~~~~~~~~~~~ 74 (280)
T 1urh_A 4 WFVGADWLAEHID-DPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAV--------FFDIEALSDHTSPLPHMLPRPETF 74 (280)
T ss_dssp CEECHHHHHTTTT-CTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCE--------ECCGGGGSCSSSSSSSCCCCHHHH
T ss_pred ceeeHHHHHHhcC-CCCeEEEEeeccCCcccccchhhhhhhCcCCCCE--------ECCHHHhcCCCCCCCCCCCCHHHH
Confidence 3689999999984 4789999999 78899999999998 8887655432 22355666778
Q ss_pred hHHHHHHHHhhhccCCCCcEEEEEeCCCch-HHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 337 DDTLTAAVIRNLKIVQDRSKVIVMDADGTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 337 ~~ll~alGIs~Lk~~~kd~~IVVyC~sG~r-S~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
++.+..+|+ +++++|||||++|.+ |.++++.|+.+||++|++|+||+.+|.++|+|++.+.+
T Consensus 75 ~~~~~~~gi------~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 137 (280)
T 1urh_A 75 AVAMRELGV------NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV 137 (280)
T ss_dssp HHHHHHTTC------CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred HHHHHHcCC------CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence 888888887 789999999999998 99999999999999999999999999999999987654
No 25
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.78 E-value=1e-19 Score=160.72 Aligned_cols=114 Identities=19% Similarity=0.212 Sum_probs=88.6
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCC-------CCccccccccccccCcccccchhHhhhcCchhhhHHHH
Q 011705 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGI-------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLT 341 (479)
Q Consensus 269 ~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHI-------PGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~ 341 (479)
.+.|+++++.+++.++++++|||||++.||+.+|+ |||+ |||+.++.. +.++++ +.
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~--------~ip~~~~~~--------~~~~~~-l~ 66 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAV--------STVYNGEDK--------PGFLKK-LS 66 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCE--------ECCCCGGGH--------HHHHHH-HH
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceE--------EeecccccC--------hhHHHH-HH
Confidence 46799999999986456899999999999987544 5888 888755421 011111 10
Q ss_pred HHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccH---HHHHHcCCCcccccc
Q 011705 342 AAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF---QSWVKEGLRIKELKS 404 (479)
Q Consensus 342 alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~---~aW~aaGLPV~~~~p 404 (479)
+. + ..+++++||+||++|.||..+++.|+.+||++|++|.||+ .+|+++|+|++.+..
T Consensus 67 ~~----~-~~~~~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~ 127 (134)
T 1vee_A 67 LK----F-KDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKK 127 (134)
T ss_dssp TT----C-SCGGGCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCC
T ss_pred HH----h-CCCCCCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCC
Confidence 00 0 0157899999999999999999999999999999999999 789999999987544
No 26
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.78 E-value=2.3e-19 Score=175.68 Aligned_cols=116 Identities=18% Similarity=0.194 Sum_probs=96.5
Q ss_pred cCHHHHHHHHhC--CCCcEEEEcCChhhhh----------------hcCCCCccccccccccccCcccccchhHhhhcCc
Q 011705 272 LSPKSTLELLRG--KENAVLIDVRHEDLRE----------------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGG 333 (479)
Q Consensus 272 ISp~El~elL~~--~~~~vLIDVRs~~Ef~----------------~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~ 333 (479)
|+++++.+++.. ..+..|||||++.||. .||||||+ |+|+.++.... ..++++
T Consensus 148 i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~ 218 (285)
T 1uar_A 148 AYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAK--------NIPWAKAVNPD-GTFKSA 218 (285)
T ss_dssp ECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCH
T ss_pred EcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCcc--------ccCHHHhcCCC-CcCCCH
Confidence 889999998830 1245799999999997 89999999 89987765432 235566
Q ss_pred hhhhHHHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHH-HccCCCEEEecccHHHHH-HcCCCcccc
Q 011705 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLR-KLGVMRAFLVQGGFQSWV-KEGLRIKEL 402 (479)
Q Consensus 334 ~~L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~-~~Gf~nV~vL~GG~~aW~-aaGLPV~~~ 402 (479)
+++.+.+..+|+ +++++||+||++|.||..+++.|+ .+||++|++|+||+.+|. ..|+|++.+
T Consensus 219 ~~l~~~~~~~g~------~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 219 EELRALYEPLGI------TKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp HHHHHHHGGGTC------CTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHHHHHHHHcCC------CCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 667776666666 789999999999999999999999 999999999999999998 799999864
No 27
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.77 E-value=3.4e-19 Score=179.07 Aligned_cols=119 Identities=10% Similarity=0.133 Sum_probs=101.4
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhh-hhhcCCCCccccccccccccCcc-cccchhHhhhcCchhhhHHHHHHHHhhh
Q 011705 271 DLSPKSTLELLRGKENAVLIDVRHEDL-RERDGIPDLRRGARFRYASVYLP-EVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVRs~~E-f~~gHIPGA~~av~~~~~nIPl~-el~~~l~~ll~~~~~L~~ll~alGIs~L 348 (479)
.|+++++.+++. +++++|||||++.| |..||||||+ |+|+. .+.......+++++.+++.+.++|+
T Consensus 41 ~is~~~l~~~l~-~~~~~iiDvR~~~e~y~~gHIpGAi--------~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi--- 108 (318)
T 3hzu_A 41 LVTADWLSAHMG-APGLAIVESDEDVLLYDVGHIPGAV--------KIDWHTDLNDPRVRDYINGEQFAELMDRKGI--- 108 (318)
T ss_dssp EECHHHHHHHTT-CTTEEEEECCSSTTSGGGCBCTTEE--------ECCHHHHHBCSSSSSBCCHHHHHHHHHHTTC---
T ss_pred eecHHHHHHhcc-CCCEEEEECCCChhHHhcCcCCCCe--------EeCchhhhccCcccCCCCHHHHHHHHHHcCC---
Confidence 599999999984 57899999999886 9999999999 88863 2332233456667778888888888
Q ss_pred ccCCCCcEEEEEeCCCc-hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 349 k~~~kd~~IVVyC~sG~-rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
+++++|||||++|. +|.++++.|+.+||++|++|+||+.+|+++|+|++.+.+
T Consensus 109 ---~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 162 (318)
T 3hzu_A 109 ---ARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP 162 (318)
T ss_dssp ---CTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCC
Confidence 88999999999988 999999999999999999999999999999999987543
No 28
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.77 E-value=6.3e-19 Score=174.39 Aligned_cols=122 Identities=20% Similarity=0.310 Sum_probs=103.6
Q ss_pred CCCccCHHHHHHHHhCC---CCcEEEEcC--------ChhhhhhcCCCCccccccccccccCcccccch---hHhhhcCc
Q 011705 268 YSGDLSPKSTLELLRGK---ENAVLIDVR--------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGG 333 (479)
Q Consensus 268 ~~g~ISp~El~elL~~~---~~~vLIDVR--------s~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~---l~~ll~~~ 333 (479)
|...|+++++.+++.++ ++++||||| ++.||..||||||+ |+|+.++... ...+++++
T Consensus 6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~l~~~~~~~~~~lp~~ 77 (296)
T 1rhs_A 6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGAS--------FFDIEECRDKASPYEVMLPSE 77 (296)
T ss_dssp CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCE--------ECCTTTSSCTTSSSSSCCCCH
T ss_pred cCceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCE--------EeCHHHhcCCCCCCCCCCCCH
Confidence 45679999999999642 579999999 68999999999998 8887665433 23466777
Q ss_pred hhhhHHHHHHHHhhhccCCCCcEEEEEeCC--Cch-HHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD--GTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 334 ~~L~~ll~alGIs~Lk~~~kd~~IVVyC~s--G~r-S~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
+.+++.+..+|+ +++++|||||++ |.+ +.++++.|+.+||++|++|+||+.+|.++|+|+....
T Consensus 78 ~~~~~~l~~lgi------~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 144 (296)
T 1rhs_A 78 AGFADYVGSLGI------SNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP 144 (296)
T ss_dssp HHHHHHHHHTTC------CTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSC
T ss_pred HHHHHHHHHcCC------CCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCC
Confidence 778888888887 789999999999 876 8899999999999999999999999999999998764
No 29
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.77 E-value=2.2e-19 Score=162.65 Aligned_cols=108 Identities=20% Similarity=0.331 Sum_probs=90.7
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
..|+++++.+++ ++++++|||||++.||..||||||+ |+|+.++...+.+++ +
T Consensus 28 ~~Is~~el~~~l-~~~~~~lIDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~l~------------------~ 80 (152)
T 1t3k_A 28 SYITSTQLLPLH-RRPNIAIIDVRDEERNYDGHIAGSL--------HYASGSFDDKISHLV------------------Q 80 (152)
T ss_dssp EEECTTTTTTCC-CCTTEEEEEESCSHHHHSSCCCSSE--------EECCSSSSTTHHHHH------------------H
T ss_pred ceECHHHHHHHh-cCCCEEEEECCChhhccCccCCCCE--------ECCHHHHHHHHHHHH------------------H
Confidence 468999998887 3568999999999999999999999 899877765544321 1
Q ss_pred cCCCCcEEEEEeC-CCchHHHHHHHHHH--------ccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 350 IVQDRSKVIVMDA-DGTRSKGIARSLRK--------LGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 350 ~~~kd~~IVVyC~-sG~rS~~AA~~L~~--------~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
..+++++||+||+ +|.||..+++.|.+ .||++|++|+||+.+|.++|+|++...+
T Consensus 81 ~~~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 144 (152)
T 1t3k_A 81 NVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 144 (152)
T ss_dssp TCCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred hcCCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence 1367899999999 99999999988754 8999999999999999999999987554
No 30
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.76 E-value=5.4e-19 Score=185.39 Aligned_cols=191 Identities=20% Similarity=0.228 Sum_probs=129.0
Q ss_pred cchhHHHHHHHHHHhhhhcccCcceEEEeeccCCCCCCCchHHHhhh------hhHhhhhhcccccchHHHHHHHHHHHH
Q 011705 159 TVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNL------YEDRAVKLWRPVGSALQQVSVAIEGLE 232 (479)
Q Consensus 159 ~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~p~~~~~~~~------~e~~~~~v~~p~g~~~~qv~~~le~l~ 232 (479)
..++.++|++.+.. . .+.|.|+...|.-||++.++.-........ ..++-..+++--|. +.++ . ...
T Consensus 273 ~~is~~~l~~~l~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l~~~~~~vvvy~~~~~-~~~~---~-~~L 345 (474)
T 3tp9_A 273 VDLPPERVRAWREG-G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPADRPIHLLAADAI-APDV---I-RAL 345 (474)
T ss_dssp CCCCGGGHHHHHHT-S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHHCCSSSCEEEECCTTT-HHHH---H-HHH
T ss_pred ceeCHHHHHHHhCC-C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhcCCCCCeEEEEECCCc-HHHH---H-HHH
Confidence 45677899988866 3 899999999999999997765543321100 01111112221111 1111 1 111
Q ss_pred HhcCCCCCCCcchhhHHhhhhhhHHHHHHHHHhcCC----CCccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccc
Q 011705 233 RSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGGY----SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRR 308 (479)
Q Consensus 233 ~~lg~~~~~PvL~~~v~~g~~~al~l~~~l~~~~~~----~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~ 308 (479)
+.+|++. +. ++.++..+ |...++ ...++++++.+++. +++.+|||+|++.||+.||||||+
T Consensus 346 ~~~G~~~---v~---~~l~G~~~-------W~~~g~~~~~~~~i~~~~l~~~~~-~~~~~lvDvR~~~e~~~ghIpgA~- 410 (474)
T 3tp9_A 346 RSIGIDD---VV---DWTDPAAV-------DRAAPDDVASYANVSPDEVRGALA-QQGLWLLDVRNVDEWAGGHLPQAH- 410 (474)
T ss_dssp HHTTCCC---EE---EEECGGGG-------TTCCGGGEECCEEECHHHHHHTTT-TTCCEEEECSCHHHHHHCBCTTCE-
T ss_pred HHcCCcc---eE---EecCcHHH-------HHhcccccccccccCHHHHHHHhc-CCCcEEEECCCHHHHhcCcCCCCE-
Confidence 2234321 11 01111100 111111 14689999999884 478999999999999999999999
Q ss_pred cccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEeccc
Q 011705 309 GARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGG 388 (479)
Q Consensus 309 av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG 388 (479)
|+|+.++...+.. ++++++||+||++|.||..++..|+.+||++|++|+||
T Consensus 411 -------~ip~~~l~~~~~~----------------------l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg 461 (474)
T 3tp9_A 411 -------HIPLSKLAAHIHD----------------------VPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGG 461 (474)
T ss_dssp -------ECCHHHHTTTGGG----------------------SCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTH
T ss_pred -------ECCHHHHHHHHhc----------------------CCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecCh
Confidence 9998776544332 37899999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcc
Q 011705 389 FQSWVKEGLRIK 400 (479)
Q Consensus 389 ~~aW~aaGLPV~ 400 (479)
+.+|.++|+|++
T Consensus 462 ~~~W~~~g~p~~ 473 (474)
T 3tp9_A 462 YEAWRGKGFPVE 473 (474)
T ss_dssp HHHHHHTTCCCB
T ss_pred HHHHHhCCCCCC
Confidence 999999999986
No 31
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.76 E-value=3.6e-19 Score=173.60 Aligned_cols=113 Identities=22% Similarity=0.206 Sum_probs=93.9
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhhhh----------------cCCCCccccccccccccCcccccchhHhhhcCchh
Q 011705 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 335 (479)
Q Consensus 272 ISp~El~elL~~~~~~vLIDVRs~~Ef~~----------------gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~ 335 (479)
++++++.+++. +++ |||||++.||.. ||||||+ |+|+.++.... ..+++++.
T Consensus 146 ~~~~el~~~~~-~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~~~ 213 (277)
T 3aay_A 146 AFRDEVLAAIN-VKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAI--------NVPWSRAANED-GTFKSDEE 213 (277)
T ss_dssp ECHHHHHHTTT-TSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCHHH
T ss_pred cCHHHHHHhcC-CCC--EEEeCChHHeeeeecccccccccccccCCcCCCce--------ecCHHHhcCCC-CcCCCHHH
Confidence 67889988874 333 999999999985 9999999 89886654322 23455666
Q ss_pred hhHHHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHH-ccCCCEEEecccHHHHHH-cCCCcccc
Q 011705 336 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (479)
Q Consensus 336 L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~-~Gf~nV~vL~GG~~aW~a-aGLPV~~~ 402 (479)
+++.+.++|+ +++++||+||++|.||..+++.|+. +||++|++|+||+.+|.+ .|+|++.+
T Consensus 214 l~~~~~~~~~------~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 214 LAKLYADAGL------DNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp HHHHHHHHTC------CTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred HHHHHHHcCC------CCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 7777777777 7899999999999999999999995 999999999999999998 99999764
No 32
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.76 E-value=7.4e-19 Score=171.39 Aligned_cols=119 Identities=16% Similarity=0.200 Sum_probs=98.5
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCC-hhhhhhcCCCCccccccccccccCcccc-cchhHhhhcCchhhhHHHHHHHHhhh
Q 011705 271 DLSPKSTLELLRGKENAVLIDVRH-EDLRERDGIPDLRRGARFRYASVYLPEV-GGSVKKLLRGGRELDDTLTAAVIRNL 348 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVRs-~~Ef~~gHIPGA~~av~~~~~nIPl~el-~~~l~~ll~~~~~L~~ll~alGIs~L 348 (479)
.|+++++.+++. +++++|||||+ +.||..||||||+ |+|+..+ .......+++++.+++.+..+|+
T Consensus 7 ~is~~~l~~~l~-~~~~~liDvR~~~~ey~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 74 (277)
T 3aay_A 7 LVSADWAESNLH-APKVVFVEVDEDTSAYDRDHIAGAI--------KLDWRTDLQDPVKRDFVDAQQFSKLLSERGI--- 74 (277)
T ss_dssp EECHHHHHTTTT-CTTEEEEEEESSSHHHHHCBSTTCE--------EEETTTTTBCSSSSSBCCHHHHHHHHHHHTC---
T ss_pred eEcHHHHHHHhC-CCCEEEEEcCCChhhHhhCCCCCcE--------EecccccccCCCCCCCCCHHHHHHHHHHcCC---
Confidence 589999999884 46799999998 8999999999998 7776432 11222344556667777777777
Q ss_pred ccCCCCcEEEEEeCCCc-hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 349 k~~~kd~~IVVyC~sG~-rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
+++++|||||++|. +|.++++.|+.+||++|++|+||+.+|.++|+|++...+
T Consensus 75 ---~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 75 ---ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp ---CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 78999999999976 789999999999999999999999999999999987644
No 33
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.75 E-value=5.3e-19 Score=173.09 Aligned_cols=119 Identities=17% Similarity=0.188 Sum_probs=98.9
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcC-ChhhhhhcCCCCccccccccccccCccc-ccchhHhhhcCchhhhHHHHHHHHhhh
Q 011705 271 DLSPKSTLELLRGKENAVLIDVR-HEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNL 348 (479)
Q Consensus 271 ~ISp~El~elL~~~~~~vLIDVR-s~~Ef~~gHIPGA~~av~~~~~nIPl~e-l~~~l~~ll~~~~~L~~ll~alGIs~L 348 (479)
.|+++++.+++. +++++||||| ++.||..||||||+ |+|+.. +.......+++++.+.+.+..+|+
T Consensus 9 ~is~~~l~~~l~-~~~~~liDvR~~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 76 (285)
T 1uar_A 9 LVSTDWVQEHLE-DPKVRVLEVDEDILLYDTGHIPGAQ--------KIDWQRDFWDPVVRDFISEEEFAKLMERLGI--- 76 (285)
T ss_dssp EECHHHHHTTTT-CTTEEEEEECSSTTHHHHCBCTTCE--------EECHHHHHBCSSSSSBCCHHHHHHHHHHTTC---
T ss_pred eEcHHHHHHhcC-CCCEEEEEcCCCcchhhcCcCCCCE--------ECCchhhccCCcccCCCCHHHHHHHHHHcCC---
Confidence 589999999884 5679999999 78999999999998 888753 222223345555667777777777
Q ss_pred ccCCCCcEEEEEeCCCc-hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 349 k~~~kd~~IVVyC~sG~-rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
+++++||+||++|. +|.++++.|+.+||++|++|+||+.+|.++|+|+..+.+
T Consensus 77 ---~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 130 (285)
T 1uar_A 77 ---SNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP 130 (285)
T ss_dssp ---CTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCC
Confidence 78999999999998 799999999999999999999999999999999987543
No 34
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.75 E-value=1.4e-18 Score=150.59 Aligned_cols=109 Identities=20% Similarity=0.308 Sum_probs=78.7
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhH--hhhc--------------Cc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVK--KLLR--------------GG 333 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~--~ll~--------------~~ 333 (479)
..|+++++.+ +++++|||||++.||..||||||+ |+|+.++..... .+.. ..
T Consensus 5 ~~i~~~el~~----~~~~~iiDvR~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (134)
T 3g5j_A 5 SVIKIEKALK----LDKVIFVDVRTEGEYEEDHILNAI--------NMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVS 72 (134)
T ss_dssp CEECHHHHTT----CTTEEEEECSCHHHHHHCCCTTCE--------ECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHG
T ss_pred cccCHHHHHh----cCCcEEEEcCCHHHHhcCCCCCCE--------EcCccchhhhhcccceeeecChhHHHhccccccc
Confidence 4688888755 568999999999999999999999 898855432100 0000 00
Q ss_pred hhhhHHHHHHHHhhhccCCCC-cEEEEEe-CCCchHHHHHHHHHHccCCCEEEecccHHHHHHcC
Q 011705 334 RELDDTLTAAVIRNLKIVQDR-SKVIVMD-ADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (479)
Q Consensus 334 ~~L~~ll~alGIs~Lk~~~kd-~~IVVyC-~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaG 396 (479)
..+.++...+ ..++++ ++||+|| ++|.||..+++.|+.+|| +|++|+||+.+|++..
T Consensus 73 ~~~~~~~~~~-----~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 73 YKLKDIYLQA-----AELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp GGHHHHHHHH-----HHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred ccHHHHHHHH-----HHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 0011111111 112567 9999999 589999999999999999 9999999999998753
No 35
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.74 E-value=3.9e-18 Score=182.59 Aligned_cols=197 Identities=14% Similarity=0.179 Sum_probs=140.7
Q ss_pred chhHHHHHHHHHHh--hhhcccCcceEEEeeccCCCCCCCchHHHhhhhh------HhhhhhcccccchHHHHHHHHHHH
Q 011705 160 VAAVDVLRNTIVAL--EESMTNGASFVVYYYGTTKESLPPEIRDALNLYE------DRAVKLWRPVGSALQQVSVAIEGL 231 (479)
Q Consensus 160 ~~~~d~l~~~~~~~--~~~~~~~~~~~~~~~G~~~~~l~p~~~~~~~~~e------~~~~~v~~p~g~~~~qv~~~le~l 231 (479)
.++.+.|++.+..- +-.+.|.|+--.|.-||++..+.-...++..... ++-..++|--|.........|
T Consensus 266 ~is~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~~~~~~~ivv~c~~g~rs~~aa~~L--- 342 (539)
T 1yt8_A 266 RLDLAGLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGSRSTPGGQLVQETDHVASVRGARLVLVDDDGVRANMSASWL--- 342 (539)
T ss_dssp EECHHHHHHHHHCTTSCEEEEECSCHHHHHHCBCTTCEECCHHHHHHSHHHHCCSBTCEEEEECSSSSHHHHHHHHH---
T ss_pred eECHHHHHHHHhCCCCCeEEEECCCHHHHhcCCCCCCEeCCHHHHHHHHHhhcCCCCCeEEEEeCCCCcHHHHHHHH---
Confidence 45677777766432 2358999999999999999876655555443322 233334555555555444333
Q ss_pred HHhcCCCCCCCcchhhHHhh-hhhhHHHHHHHHHhcCC----------CCccCHHHHHHHHhCCCCcEEEEcCChhhhhh
Q 011705 232 ERSLGFDPNDPIVPFVVFLG-TSATLWIFYWWWTYGGY----------SGDLSPKSTLELLRGKENAVLIDVRHEDLRER 300 (479)
Q Consensus 232 ~~~lg~~~~~PvL~~~v~~g-~~~al~l~~~l~~~~~~----------~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~ 300 (479)
. .+|+ + +. .+-| +..+ |...++ ...++++++.+++. +++.+|||||++.||+.
T Consensus 343 ~-~~G~---~-v~---~l~G~G~~~-------w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~-~~~~~liDvR~~~e~~~ 406 (539)
T 1yt8_A 343 A-QMGW---Q-VA---VLDGLSEAD-------FSERGAWSAPLPRQPRADTIDPTTLADWLG-EPGTRVLDFTASANYAK 406 (539)
T ss_dssp H-HTTC---E-EE---EECSCCGGG-------CCBCSSCCCCCCCCCCCCEECHHHHHHHTT-STTEEEEECSCHHHHHH
T ss_pred H-HcCC---e-EE---EecCCChHH-------HHHhhccccCCCCCCcCCccCHHHHHHHhc-CCCeEEEEeCCHHHhhc
Confidence 2 3576 2 21 1223 2211 222222 24689999999984 56899999999999999
Q ss_pred cCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCC
Q 011705 301 DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVM 380 (479)
Q Consensus 301 gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~ 380 (479)
||||||+ ++|..++...+.+ ++++++||+||.+|.||..++..|+.+||+
T Consensus 407 ghIpgA~--------~ip~~~l~~~l~~----------------------l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~ 456 (539)
T 1yt8_A 407 RHIPGAA--------WVLRSQLKQALER----------------------LGTAERYVLTCGSSLLARFAVAEVQALSGK 456 (539)
T ss_dssp CBCTTCE--------ECCGGGHHHHHHH----------------------HCCCSEEEEECSSSHHHHHHHHHHHHHHCS
T ss_pred CcCCCch--------hCCHHHHHHHHHh----------------------CCCCCeEEEEeCCChHHHHHHHHHHHcCCC
Confidence 9999999 8887666543332 278899999999999999999999999999
Q ss_pred CEEEecccHHHHHHcCCCccccccc
Q 011705 381 RAFLVQGGFQSWVKEGLRIKELKSE 405 (479)
Q Consensus 381 nV~vL~GG~~aW~aaGLPV~~~~p~ 405 (479)
+|++|+||+.+|.++|+|++++.+.
T Consensus 457 ~v~~l~GG~~~W~~~g~pv~~~~~~ 481 (539)
T 1yt8_A 457 PVFLLDGGTSAWVAAGLPTEDGESL 481 (539)
T ss_dssp CEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred CEEEeCCcHHHHHhCCCCcccCCCC
Confidence 9999999999999999999986543
No 36
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.73 E-value=3.8e-18 Score=171.47 Aligned_cols=213 Identities=17% Similarity=0.173 Sum_probs=135.2
Q ss_pred cchhHHHHHHHHHHhhhhcccCcceEE-EeeccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHHHHHHhcCC
Q 011705 159 TVAAVDVLRNTIVALEESMTNGASFVV-YYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (479)
Q Consensus 159 ~~~~~d~l~~~~~~~~~~~~~~~~~~~-~~~G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~qv~~~le~l~~~lg~ 237 (479)
.-++.++|++.+..-+-.+.|.|+.-. |.-||++.++.-++...++... ..++... . .++.....+|+
T Consensus 40 ~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~------~~~~~~~-~----~~~~~l~~lgi 108 (318)
T 3hzu_A 40 RLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPR------VRDYING-E----QFAELMDRKGI 108 (318)
T ss_dssp GEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSS------SSSBCCH-H----HHHHHHHHTTC
T ss_pred ceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCc------ccCCCCH-H----HHHHHHHHcCC
Confidence 457788888877554556889998765 8899999877655443221100 0011110 1 11222223455
Q ss_pred CCCCCcchhhHHhhhhhhHHHHHHH-----------------HHhcCCC----------------------CccCHHHHH
Q 011705 238 DPNDPIVPFVVFLGTSATLWIFYWW-----------------WTYGGYS----------------------GDLSPKSTL 278 (479)
Q Consensus 238 ~~~~PvL~~~v~~g~~~al~l~~~l-----------------~~~~~~~----------------------g~ISp~El~ 278 (479)
..++||+++.-- +...+..+++.+ |...++. -.++++|+.
T Consensus 109 ~~~~~vVvyc~~-g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~i~~~el~ 187 (318)
T 3hzu_A 109 ARDDTVVIYGDK-SNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVL 187 (318)
T ss_dssp CTTCEEEEECSG-GGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCCTTTBCCHHHHH
T ss_pred CCCCeEEEECCC-CCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCCCCCCCccccccCCCccccccHHHHH
Confidence 555555432110 000011111111 2222110 125789999
Q ss_pred HHHhCCCCcEEEEcCChhhhhh----------------cCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHH
Q 011705 279 ELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (479)
Q Consensus 279 elL~~~~~~vLIDVRs~~Ef~~----------------gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~a 342 (479)
+++.+ . +|||||++.||.. ||||||+ |+|+.++....+ .+++++++.+.+
T Consensus 188 ~~l~~--~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~--------niP~~~~~~~~g-~~~~~~~l~~~~-- 253 (318)
T 3hzu_A 188 AILGA--Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAV--------HIPWGKAADESG-RFRSREELERLY-- 253 (318)
T ss_dssp HHTTT--S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCE--------ECCGGGGBCTTS-CBCCHHHHHHHT--
T ss_pred HhhcC--C-eEEecCCHHHhcccccCccccccccCCcCcCCCCee--------ecCHHHhcCCCC-cCCCHHHHHHHh--
Confidence 98842 3 8999999999998 9999999 999876643222 233344444433
Q ss_pred HHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHH-ccCCCEEEecccHHHHHH-cCCCccccc
Q 011705 343 AVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKELK 403 (479)
Q Consensus 343 lGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~-~Gf~nV~vL~GG~~aW~a-aGLPV~~~~ 403 (479)
.+ ++++++||+||++|.||..++..|+. +||++|++|+|||.+|.+ .|+|++++.
T Consensus 254 ~~------l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~ 310 (318)
T 3hzu_A 254 DF------INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE 310 (318)
T ss_dssp TT------CCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred cC------CCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence 22 37899999999999999999999997 999999999999999995 799998864
No 37
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.73 E-value=6.1e-18 Score=168.69 Aligned_cols=121 Identities=18% Similarity=0.278 Sum_probs=99.9
Q ss_pred CCccCHHHHHHHHhCC---CCcEEEEcC---------ChhhhhhcCCCCccccccccccccCccccc---chhHhhhcCc
Q 011705 269 SGDLSPKSTLELLRGK---ENAVLIDVR---------HEDLRERDGIPDLRRGARFRYASVYLPEVG---GSVKKLLRGG 333 (479)
Q Consensus 269 ~g~ISp~El~elL~~~---~~~vLIDVR---------s~~Ef~~gHIPGA~~av~~~~~nIPl~el~---~~l~~ll~~~ 333 (479)
...|+++++.+++.+. ++++||||| ++.||..||||||+ |+|+.++. .....+++++
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi--------~i~~~~~~~~~~~~~~~lp~~ 92 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAA--------FFDIDQCSDRTSPYDHMLPGA 92 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCE--------ECCTTTSSCSSCSSSSCCCCH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCe--------EeCHHHhcCcCCCCCCCCCCH
Confidence 3569999999999643 389999999 78999999999998 77765432 2234456667
Q ss_pred hhhhHHHHHHHHhhhccCCCCcEEEEEeCC---CchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD---GTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 334 ~~L~~ll~alGIs~Lk~~~kd~~IVVyC~s---G~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
+.+++.+.++|+ +++++|||||++ +.+|.++++.|+.+||++|++|+||+.+|+++|+|+....
T Consensus 93 ~~~~~~~~~lgi------~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 159 (302)
T 3olh_A 93 EHFAEYAGRLGV------GAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGK 159 (302)
T ss_dssp HHHHHHHHHTTC------CSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSC
T ss_pred HHHHHHHHHcCC------CCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCC
Confidence 778888888888 789999999964 3469999999999999999999999999999999998764
No 38
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.73 E-value=1.8e-18 Score=140.81 Aligned_cols=84 Identities=20% Similarity=0.239 Sum_probs=70.2
Q ss_pred CcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhccCCCCcEEEEEeCCCc
Q 011705 286 NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGT 365 (479)
Q Consensus 286 ~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~ 365 (479)
+++|||||++.||..+|||||+ |+|+.++...+.+ +++ +++++||+||++|.
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------l~~------~~~~~ivv~C~~g~ 52 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAI--------NIPLKEVKERIAT--------------AVP------DKNDTVKVYCNAGR 52 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCE--------ECCHHHHHHHHHH--------------HCC------CTTSEEEEEESSSH
T ss_pred CCEEEECCCHHHHHhCCCCCCE--------EcCHHHHHHHHHH--------------hCC------CCCCcEEEEcCCCc
Confidence 4689999999999999999999 9998665443322 222 78899999999999
Q ss_pred hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccc
Q 011705 366 RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (479)
Q Consensus 366 rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~ 401 (479)
||..+++.|+.+||++|+++ ||+.+| +.|+.+
T Consensus 53 rs~~aa~~L~~~G~~~v~~l-GG~~~w---~~~~~~ 84 (85)
T 2jtq_A 53 QSGQAKEILSEMGYTHVENA-GGLKDI---AMPKVK 84 (85)
T ss_dssp HHHHHHHHHHHTTCSSEEEE-EETTTC---CSCEEE
T ss_pred hHHHHHHHHHHcCCCCEEec-cCHHHH---hccccc
Confidence 99999999999999999999 998888 445443
No 39
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=145.98 Aligned_cols=122 Identities=16% Similarity=0.220 Sum_probs=81.5
Q ss_pred ccCHHHHHH--------HHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHH
Q 011705 271 DLSPKSTLE--------LLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (479)
Q Consensus 271 ~ISp~El~e--------lL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~a 342 (479)
.|+++++.+ ++ ++++++|||||++.||..||||||+ |+|+.++..... +..++..+...+..
T Consensus 2 ~Is~~~l~~~l~~~~~~~l-~~~~~~iiDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~-~~~~~~~~~~~~~~ 71 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHL-PSQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRR-LQQGKITVLDLISC 71 (142)
T ss_dssp EECHHHHHHHHHC-----------CEEEECSCHHHHHHEEETTCE--------ECCCSSHHHHHH-HHTTSSCHHHHHHT
T ss_pred ccCHHHHHHHHHhcccccC-CCCCCEEEEeCCHHHhhhhhccCcc--------ccCccHHHHHHH-hhcCCcchhhhCCC
Confidence 478999998 54 3457899999999999999999999 888866432111 10011112222211
Q ss_pred HHH-hhhccCCCCcEEEEEeCCCchH---------HHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccc
Q 011705 343 AVI-RNLKIVQDRSKVIVMDADGTRS---------KGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 343 lGI-s~Lk~~~kd~~IVVyC~sG~rS---------~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
.+. ..++.. ++++||+||++|.++ ..++..|...|| +|++|+||+.+|.++|.|+..+.+
T Consensus 72 ~~~~~~~~~~-~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~~ 141 (142)
T 2ouc_A 72 REGKDSFKRI-FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNSK 141 (142)
T ss_dssp TSCTTHHHHH-HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEECC
T ss_pred hhhhHHHhcc-CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhcccC
Confidence 100 000000 267899999999875 457788999999 999999999999999999876543
No 40
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.70 E-value=1.1e-17 Score=151.26 Aligned_cols=109 Identities=18% Similarity=0.219 Sum_probs=86.6
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHH
Q 011705 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (479)
Q Consensus 270 g~ISp~El~elL~~~-----~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alG 344 (479)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++...... ....
T Consensus 23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~~~~~~~~---~~~~--------- 82 (161)
T 1c25_A 23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAV--------NLHMEEEVEDFLL---KKPI--------- 82 (161)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHTT---TSCC---------
T ss_pred ceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcE--------eCChhHHHHHHHh---hhhh---------
Confidence 469999999999643 47899999999999999999999 9998665332100 0000
Q ss_pred HhhhccCCCCcEE--EEEeC-CCchHHHHHHHHHHc----------cCCCEEEecccHHHHHHcCCCccccc
Q 011705 345 IRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 345 Is~Lk~~~kd~~I--VVyC~-sG~rS~~AA~~L~~~----------Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
..++++++ |+||+ +|.||..+++.|+.. ||++|++|+||+.+|.+.+.|+..+.
T Consensus 83 -----~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~ 149 (161)
T 1c25_A 83 -----VPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP 149 (161)
T ss_dssp -----CCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred -----ccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence 01467786 67899 899999999999864 99999999999999999999988753
No 41
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.70 E-value=3.4e-18 Score=153.19 Aligned_cols=123 Identities=18% Similarity=0.208 Sum_probs=85.4
Q ss_pred CccCHHHHHHHHhC-CCCcEEEEcCChhhhhhcCCCCccccccccccccCccccc-chhHhhhcCchhhhHHHHHHHHhh
Q 011705 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG-GSVKKLLRGGRELDDTLTAAVIRN 347 (479)
Q Consensus 270 g~ISp~El~elL~~-~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~-~~l~~ll~~~~~L~~ll~alGIs~ 347 (479)
+.|+++++.+++++ +++++|||||++.||..||||||+ |+|+.++. .++. .+...+..++.......
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAi--------nip~~~l~~~~~~---~~~~~~~~ll~~~~~~~ 72 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAI--------NINCSKLMKRRLQ---QDKVLITELIQHSAKHK 72 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCE--------ECCCCHHHHHHHH---TTSSCHHHHHHHSCSSC
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCe--------eeChHHHHHhhhh---cCCcCHHHhcCchhhhh
Confidence 57999999999953 467999999999999999999999 89987652 2111 00000111110000000
Q ss_pred hccCCCCcEEEEEeCCCchHHHH------HHHHHHc--cCCCEEEecccHHHHHHcCCCcccccc
Q 011705 348 LKIVQDRSKVIVMDADGTRSKGI------ARSLRKL--GVMRAFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 348 Lk~~~kd~~IVVyC~sG~rS~~A------A~~L~~~--Gf~nV~vL~GG~~aW~aaGLPV~~~~p 404 (479)
+ ..+++++|||||++|.++..+ ++.|+.+ ||++|++|+||+.+|.+.+.++....+
T Consensus 73 ~-~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~~ 136 (153)
T 2vsw_A 73 V-DIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGKS 136 (153)
T ss_dssp C-CCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC--
T ss_pred h-ccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCCC
Confidence 0 126789999999999988665 5777744 999999999999999998766665443
No 42
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.70 E-value=8e-18 Score=173.20 Aligned_cols=116 Identities=19% Similarity=0.232 Sum_probs=97.6
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCC--------hhhhhhcCCCCccccccccccccCccc-ccch-----hHhhhcCchh
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRH--------EDLRERDGIPDLRRGARFRYASVYLPE-VGGS-----VKKLLRGGRE 335 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs--------~~Ef~~gHIPGA~~av~~~~~nIPl~e-l~~~-----l~~ll~~~~~ 335 (479)
..|+++++.+++. + ++|||||+ +.||..||||||+ |+|+.. +... ....+++++.
T Consensus 14 ~~Is~~el~~~l~-~--~~iIDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~~l~~~~~~~~~~~~lp~~~~ 82 (373)
T 1okg_A 14 VFLDPSEVADHLA-E--YRIVDCRYSLKIKDHGSIQYAKEHVKSAI--------RADVDTNLSKLVPTSTARHPLPPXAE 82 (373)
T ss_dssp CEECHHHHTTCGG-G--SEEEECCCCSSSTTTTTTHHHHCEETTCE--------ECCTTTTSCCCCTTCCCSSCCCCHHH
T ss_pred cEEcHHHHHHHcC-C--cEEEEecCCccccccchhHHhhCcCCCCE--------EeCchhhhhcccccCCccccCCCHHH
Confidence 4689999998884 2 89999998 6999999999998 888764 5432 2345666777
Q ss_pred hhHHHHHHHHhhhccCCCCcEEEEEe-CCCchHH-HHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 336 LDDTLTAAVIRNLKIVQDRSKVIVMD-ADGTRSK-GIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 336 L~~ll~alGIs~Lk~~~kd~~IVVyC-~sG~rS~-~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
+++.+..+|+ +++++||||| ++|.+|. ++++.|+.+|| +|++|+||+.+|+++|+|++.+.
T Consensus 83 f~~~l~~~gi------~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~ 145 (373)
T 1okg_A 83 FIDWCMANGM------AGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGE 145 (373)
T ss_dssp HHHHHHHTTC------SSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSC
T ss_pred HHHHHHHcCC------CCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCC
Confidence 7877877887 7899999999 7787886 99999999999 99999999999999999998653
No 43
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.69 E-value=5.1e-17 Score=173.90 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=92.6
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
..|+++++.+++.++++++|||||++.||..||||||+ |+|+.++...+..+.
T Consensus 7 ~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv--------~ip~~~~~~~~~~l~------------------- 59 (539)
T 1yt8_A 7 AVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAA--------NLPLSRLELEIHARV------------------- 59 (539)
T ss_dssp EEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCE--------ECCGGGHHHHHHHHS-------------------
T ss_pred cccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHhhC-------------------
Confidence 46999999999965568999999999999999999999 999876655444321
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
.+++++||+||++|.+|.++++.|+..||++|++|+||+.+|+++|+|+..+.
T Consensus 60 -~~~~~~iVvyc~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 112 (539)
T 1yt8_A 60 -PRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDV 112 (539)
T ss_dssp -CCTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSS
T ss_pred -CCCCCeEEEEECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCC
Confidence 15789999999999999999999999999999999999999999999997654
No 44
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.69 E-value=4.5e-17 Score=147.07 Aligned_cols=107 Identities=20% Similarity=0.231 Sum_probs=82.4
Q ss_pred CccCHHHHHHHHhCC---CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccc-hhHhhhcCchhhhHHHHHHHH
Q 011705 270 GDLSPKSTLELLRGK---ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVI 345 (479)
Q Consensus 270 g~ISp~El~elL~~~---~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~-~l~~ll~~~~~L~~ll~alGI 345 (479)
..|+++++.+++.++ ++++|||||++ ||..||||||+ |+|+.++.. .+.. +...+ .-
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAi--------nip~~~l~~~~~~~-------l~~~l---~~ 65 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSI--------NMPTISCTEEMYEK-------LAKTL---FE 65 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCE--------ECCTTTCCHHHHHH-------HHHHH---HH
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcE--------ECChhHhhHHHHHH-------HHHHh---cc
Confidence 468999999998632 37899999999 99999999999 899876643 2221 11111 10
Q ss_pred hhhccCCCCcEEEEEe-CCCchHHHHH----HHHHHccC--CCEEEecccHHHHHHcCCCccc
Q 011705 346 RNLKIVQDRSKVIVMD-ADGTRSKGIA----RSLRKLGV--MRAFLVQGGFQSWVKEGLRIKE 401 (479)
Q Consensus 346 s~Lk~~~kd~~IVVyC-~sG~rS~~AA----~~L~~~Gf--~nV~vL~GG~~aW~aaGLPV~~ 401 (479)
...+.||+|| .+|.||..++ +.|+..|| ++|++|+||+.+|.++|.++..
T Consensus 66 ------~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~ 122 (152)
T 2j6p_A 66 ------EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP 122 (152)
T ss_dssp ------TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred ------cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence 2334677789 7999998888 77888997 5999999999999999998765
No 45
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.67 E-value=5.7e-17 Score=148.68 Aligned_cols=109 Identities=20% Similarity=0.262 Sum_probs=83.3
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHH
Q 011705 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (479)
Q Consensus 270 g~ISp~El~elL~~~-----~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alG 344 (479)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++...... ....+
T Consensus 24 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~---~~~~~-------- 84 (175)
T 2a2k_A 24 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLL---KSPIA-------- 84 (175)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHH---SSCCC--------
T ss_pred ceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcE--------ECChhHHHHHhhh---hhhhc--------
Confidence 479999999999543 47899999999999999999999 9998665332100 00000
Q ss_pred HhhhccCCCCcEEEE--EeC-CCchHHHHHHHHHH----------ccCCCEEEecccHHHHHHcCCCcccc
Q 011705 345 IRNLKIVQDRSKVIV--MDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 402 (479)
Q Consensus 345 Is~Lk~~~kd~~IVV--yC~-sG~rS~~AA~~L~~----------~Gf~nV~vL~GG~~aW~aaGLPV~~~ 402 (479)
..+++++||| ||+ +|.||..+++.|+. +||++|++|+||+.+|.++|.|+..+
T Consensus 85 -----~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~ 150 (175)
T 2a2k_A 85 -----PCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 150 (175)
T ss_dssp -----C----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred -----cccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCC
Confidence 0136788755 599 89999999999986 49999999999999999999998654
No 46
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.66 E-value=9.5e-17 Score=152.60 Aligned_cols=108 Identities=21% Similarity=0.273 Sum_probs=86.5
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccch-hHhhhcCchhhhHHHHHH
Q 011705 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-VKKLLRGGRELDDTLTAA 343 (479)
Q Consensus 270 g~ISp~El~elL~~~-----~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~-l~~ll~~~~~L~~ll~al 343 (479)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.++... +.. ...+
T Consensus 44 ~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAi--------nip~~~l~~~~~~~----~~~l------- 104 (211)
T 1qb0_A 44 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLLK----SPIA------- 104 (211)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHHT----TTCC-------
T ss_pred CeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCE--------ECCchHHHHHhhhh----hhhc-------
Confidence 579999999999543 37899999999999999999999 9998665332 110 0000
Q ss_pred HHhhhccCCCCcEE--EEEeC-CCchHHHHHHHHHH----------ccCCCEEEecccHHHHHHcCCCcccc
Q 011705 344 VIRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 402 (479)
Q Consensus 344 GIs~Lk~~~kd~~I--VVyC~-sG~rS~~AA~~L~~----------~Gf~nV~vL~GG~~aW~aaGLPV~~~ 402 (479)
..+++++| |+||+ +|.||..+++.|+. +||++|++|+||+.+|.++|.|+..+
T Consensus 105 ------~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 105 ------PCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp ------CSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ------cccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 01367887 78899 99999999999986 69999999999999999999998664
No 47
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.65 E-value=1.7e-16 Score=157.04 Aligned_cols=103 Identities=14% Similarity=0.236 Sum_probs=86.0
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhc
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk 349 (479)
..|+++++.+++. +++++|||||++.||+.||||||+ |+|+.++.+....+ . ..+.
T Consensus 122 ~~Is~~el~~ll~-~~~~vlIDVR~~~Ey~~GHIpGAi--------niP~~~~~~~~~~l-------~---~~l~----- 177 (265)
T 4f67_A 122 TYLSPEEWHQFIQ-DPNVILLDTRNDYEYELGTFKNAI--------NPDIENFREFPDYV-------Q---RNLI----- 177 (265)
T ss_dssp CEECHHHHHHHTT-CTTSEEEECSCHHHHHHEEETTCB--------CCCCSSGGGHHHHH-------H---HHTG-----
T ss_pred ceECHHHHHHHhc-CCCeEEEEeCCchHhhcCcCCCCE--------eCCHHHHHhhHHHH-------H---Hhhh-----
Confidence 4689999999994 578999999999999999999999 89987765432221 1 0111
Q ss_pred cCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCC
Q 011705 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 397 (479)
Q Consensus 350 ~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGL 397 (479)
.+++++||+||.+|.||..+++.|+..||++|++|+||+.+|.+..-
T Consensus 178 -~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 178 -DKKDKKIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp -GGTTSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred -hCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 16789999999999999999999999999999999999999998653
No 48
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.64 E-value=1.9e-16 Score=146.19 Aligned_cols=112 Identities=17% Similarity=0.148 Sum_probs=83.9
Q ss_pred CccCHHHHHHHHhCCC------CcEEEEcCChhhhhhcCCCCccccccccccccCcccccch---hHhhhcCchhhhHHH
Q 011705 270 GDLSPKSTLELLRGKE------NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTL 340 (479)
Q Consensus 270 g~ISp~El~elL~~~~------~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~---l~~ll~~~~~L~~ll 340 (479)
..|+++++.+++.+++ +++|||||+ .||..||||||+ |+|+.++... +.+ +.+.+
T Consensus 31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAi--------niP~~~l~~~~~~l~~-------l~~~~ 94 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGW--------HYAYSRLKQDPEYLRE-------LKHRL 94 (169)
T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCE--------ECCHHHHHHCHHHHHH-------HHHHH
T ss_pred cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCE--------ECCHHHhhcccccHHH-------HHHHH
Confidence 4799999999996433 599999999 999999999999 9998776543 222 11212
Q ss_pred HHHHHhhhccCCCCcEEEEEeCCC-chHHHHHHHHHH----cc--CCCEEEecccHHHHHHcCCCccc
Q 011705 341 TAAVIRNLKIVQDRSKVIVMDADG-TRSKGIARSLRK----LG--VMRAFLVQGGFQSWVKEGLRIKE 401 (479)
Q Consensus 341 ~alGIs~Lk~~~kd~~IVVyC~sG-~rS~~AA~~L~~----~G--f~nV~vL~GG~~aW~aaGLPV~~ 401 (479)
...++. ..++++||+||.+| .|+..++..|.+ .| |.+|++|+||+.+|.+++.|...
T Consensus 95 ~~~~~~----~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 95 LEKQAD----GRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp HHHHHT----SSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred Hhhccc----ccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 222231 12257999999997 799888877654 36 67999999999999999877554
No 49
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.64 E-value=1.7e-16 Score=164.85 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=94.0
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhh-----------hhcCCCCccccccccccccCcc-------cccchhHhhhcCc
Q 011705 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLP-------EVGGSVKKLLRGG 333 (479)
Q Consensus 272 ISp~El~elL~~~~~~vLIDVRs~~Ef-----------~~gHIPGA~~av~~~~~nIPl~-------el~~~l~~ll~~~ 333 (479)
++++++.+++. +++.+|||||++.|| +.||||||+ |+|+. ++.... ..++++
T Consensus 274 i~~~e~~~~l~-~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi--------~ip~~~~~~~~~~~~~~~-~~~~~~ 343 (423)
T 2wlr_A 274 LDMEQARGLLH-RQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGAR--------WGHAGSDSTHMEDFHNPD-GTMRSA 343 (423)
T ss_dssp ECHHHHHTTTT-CSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCE--------ECCCCSSTTCCGGGBCTT-SSBCCH
T ss_pred ecHHHHHHHhc-CCCceEEecCchhheeeeccCCCCCCcCCCCCCcc--------ccccccccccHHHHcCCC-CcCCCH
Confidence 67888888874 467899999999999 899999998 55543 332211 123444
Q ss_pred hhhhHHHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHH-cCCCccccccc
Q 011705 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELKSE 405 (479)
Q Consensus 334 ~~L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~a-aGLPV~~~~p~ 405 (479)
+++.+.+...++ +++++||+||++|.||..++..|+.+||++|++|+||+.+|.+ .|+|++++.+.
T Consensus 344 ~~l~~~~~~~~~------~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~ 410 (423)
T 2wlr_A 344 DDITAMWKAWNI------KPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERG 410 (423)
T ss_dssp HHHHHHHHTTTC------CTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSCC
T ss_pred HHHHHHHHHcCC------CCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCCC
Confidence 556555544455 7899999999999999999999999999999999999999998 89999886553
No 50
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.64 E-value=3.6e-16 Score=149.04 Aligned_cols=97 Identities=27% Similarity=0.330 Sum_probs=80.6
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhhhh----------cCCCCccccccccccccCcccccchhHhhhcCchhhhHHHH
Q 011705 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLT 341 (479)
Q Consensus 272 ISp~El~elL~~~~~~vLIDVRs~~Ef~~----------gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~ 341 (479)
++++++.+ +.+|||||++.||.. ||||||+ |+|+.++.... +.+.
T Consensus 123 i~~~e~~~------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-----------e~~~ 177 (230)
T 2eg4_A 123 LTADEAAR------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSK--------NAPLELFLSPE-----------GLLE 177 (230)
T ss_dssp CCHHHHHT------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCE--------ECCGGGGGCCT-----------THHH
T ss_pred eCHHHHhh------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcE--------EcCHHHhCChH-----------HHHH
Confidence 55555543 678999999999999 9999999 99987664321 0223
Q ss_pred HHHHhhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcc
Q 011705 342 AAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400 (479)
Q Consensus 342 alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~ 400 (479)
+.++ +++++||+||++|.||..++..|+.+| ++|++|+||+.+|.+.|+|++
T Consensus 178 ~~~~------~~~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 178 RLGL------QPGQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp HHTC------CTTCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCB
T ss_pred hcCC------CCCCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCC
Confidence 3344 789999999999999999999999999 899999999999999999986
No 51
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.62 E-value=1.7e-16 Score=141.79 Aligned_cols=110 Identities=25% Similarity=0.360 Sum_probs=79.3
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEcCChhhhhhcCCCCccccccccccccCccccc------c--hhHhhhcCchhhhHHH
Q 011705 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG------G--SVKKLLRGGRELDDTL 340 (479)
Q Consensus 270 g~ISp~El~elL~~~-~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~------~--~l~~ll~~~~~L~~ll 340 (479)
..|+++++.+++.+. ++++|||||++.||..||||||+ |+|+.++. + .+..+++++...+ .+
T Consensus 16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAi--------nip~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~ 86 (154)
T 1hzm_A 16 ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAI--------NVAIPGIMLRRLQKGNLPVRALFTRGEDRD-RF 86 (154)
T ss_dssp SBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCC--------CCCCSSHHHHTBCCSCCCTTTTSTTSHHHH-HH
T ss_pred cccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCce--------EeCccHHHHhhhhcCcccHHHhCCCHHHHH-HH
Confidence 468999999988532 37999999999999999999999 88876532 1 1112332221111 11
Q ss_pred HHHHHhhhccCCCCcEEEEEeCCCchH-------HHHHHHHHHc---cCCCEEEecccHHHHHHcCCC
Q 011705 341 TAAVIRNLKIVQDRSKVIVMDADGTRS-------KGIARSLRKL---GVMRAFLVQGGFQSWVKEGLR 398 (479)
Q Consensus 341 ~alGIs~Lk~~~kd~~IVVyC~sG~rS-------~~AA~~L~~~---Gf~nV~vL~GG~~aW~aaGLP 398 (479)
.+ .+++++||+||.+|.++ ..+++.|+.+ ||+ |++|+||+.+|.+. +|
T Consensus 87 --~~------~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~-~p 144 (154)
T 1hzm_A 87 --TR------RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE-FS 144 (154)
T ss_dssp --HH------STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH-HC
T ss_pred --hc------cCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH-Ch
Confidence 12 26788999999999865 4456677765 998 99999999999875 44
No 52
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.60 E-value=6.8e-16 Score=148.37 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=80.9
Q ss_pred CccCHHHHHHHHhCC-----CCcEEEEcCChhhhhhcCCCCccccccccccccCccc-ccchhHhhhcCchhhhHHHHHH
Q 011705 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAA 343 (479)
Q Consensus 270 g~ISp~El~elL~~~-----~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~e-l~~~l~~ll~~~~~L~~ll~al 343 (479)
..|+++++.+++.++ ++++|||||++.||..||||||+ |+|+.+ +...+.. ...+
T Consensus 57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAi--------nIP~~~~l~~~l~~----~~~~------- 117 (216)
T 3op3_A 57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGAL--------NLYSQEELFNFFLK----KPIV------- 117 (216)
T ss_dssp EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCE--------ECCSHHHHHHHHTS----SCCC-------
T ss_pred CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCE--------ECChHHHHHHHHhh----cccc-------
Confidence 579999999999643 26899999999999999999999 999854 2221110 0000
Q ss_pred HHhhhccCCCCc--EEEEEeC-CCchHHHHHHHHHHc----------cCCCEEEecccHHHHHHcCCCcccc
Q 011705 344 VIRNLKIVQDRS--KVIVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKEL 402 (479)
Q Consensus 344 GIs~Lk~~~kd~--~IVVyC~-sG~rS~~AA~~L~~~----------Gf~nV~vL~GG~~aW~aaGLPV~~~ 402 (479)
..++++ +||+||. +|.||..+++.|+.. ||++|++|+||+.+|.+..-.+..+
T Consensus 118 ------~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lcep 183 (216)
T 3op3_A 118 ------PLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCEP 183 (216)
T ss_dssp ------CSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ------ccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcccccC
Confidence 012344 5999999 999999999999887 8999999999999999876555443
No 53
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.59 E-value=1.2e-15 Score=161.78 Aligned_cols=97 Identities=20% Similarity=0.315 Sum_probs=84.7
Q ss_pred cCCCCccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHH
Q 011705 266 GGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVI 345 (479)
Q Consensus 266 ~~~~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGI 345 (479)
.+....|+++++.++ +++++|||||++.||+.+|||||+ |+|+.++...+.+
T Consensus 469 ~~~~~~i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~--------~ip~~~l~~~~~~----------------- 520 (565)
T 3ntd_A 469 KGDATPIHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAV--------NIPVDELRDRMHE----------------- 520 (565)
T ss_dssp HTSCCEECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCE--------ECCGGGTTTSGGG-----------------
T ss_pred ccccceeeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcE--------ECCHHHHHHHHhh-----------------
Confidence 344467999998776 468999999999999999999999 9998777654433
Q ss_pred hhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcC
Q 011705 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (479)
Q Consensus 346 s~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaG 396 (479)
++++++||+||++|.||..+++.|+..|| +|++|+||+.+|+++|
T Consensus 521 -----~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 521 -----LPKDKEIIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp -----SCTTSEEEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred -----cCCcCeEEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 37899999999999999999999999999 9999999999999876
No 54
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.58 E-value=4e-16 Score=160.57 Aligned_cols=105 Identities=17% Similarity=0.159 Sum_probs=82.6
Q ss_pred CCcEEEEcCChhhhh-----------hcCCCCccccccccccccCccccc--chhHhhhcCchhhhHHHHHH--HHhhhc
Q 011705 285 ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVG--GSVKKLLRGGRELDDTLTAA--VIRNLK 349 (479)
Q Consensus 285 ~~~vLIDVRs~~Ef~-----------~gHIPGA~~av~~~~~nIPl~el~--~~l~~ll~~~~~L~~ll~al--GIs~Lk 349 (479)
++.+|||||++.||. .||||||+ |+|+.++. ......+++++++.+.+.++ |+
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAi--------niP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi---- 240 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGAR--------NLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGA---- 240 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCE--------ECCGGGGEECCSSSCEECCHHHHHHHHHTTCC------
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcE--------EecHHHhhccCCCCCccCCHHHHHHHHHhhhcCC----
Confidence 467899999999999 99999999 99987764 21111133445566555555 55
Q ss_pred cCCC---CcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHH-cCCCccccc
Q 011705 350 IVQD---RSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELK 403 (479)
Q Consensus 350 ~~~k---d~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~a-aGLPV~~~~ 403 (479)
++ +++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .++|++++.
T Consensus 241 --~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 296 (373)
T 1okg_A 241 --GDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRSI 296 (373)
T ss_dssp -----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHHH
T ss_pred --CcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccCC
Confidence 66 89999999999999999999999999999999999999997 689987653
No 55
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.57 E-value=2.9e-15 Score=135.66 Aligned_cols=108 Identities=16% Similarity=0.219 Sum_probs=78.6
Q ss_pred CccCHHHHHHHHhC-------CCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccc--hhH-------hhhcCc
Q 011705 270 GDLSPKSTLELLRG-------KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG--SVK-------KLLRGG 333 (479)
Q Consensus 270 g~ISp~El~elL~~-------~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~--~l~-------~ll~~~ 333 (479)
..|+++++.+++.. +++.+|||||++.||..||||||+ |+|+.++.. ++. .+++..
T Consensus 11 ~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~--------~i~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (158)
T 3tg1_B 11 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRRLQQGKITVLDLISCR 82 (158)
T ss_dssp CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCE--------ECCCSSHHHHHHHTTSSCCHHHHTCCC
T ss_pred cEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCce--------eechhHHHHHhhhhcCcccHHhhcCCH
Confidence 46999999999953 457899999999999999999999 888866531 110 111111
Q ss_pred hhhhHHHHHHHHhhhccCCCCcEEEEEeCCCc---------hHHHHHHHHHHccCCCEEEecccHHHHHHcC
Q 011705 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGT---------RSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (479)
Q Consensus 334 ~~L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~---------rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaG 396 (479)
... ..++ ..++++||+||.+|. ++..+++.|+..|| +|++|+|||.+|.+..
T Consensus 83 ~~~---------~~~~-~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~ 143 (158)
T 3tg1_B 83 EGK---------DSFK-RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH 143 (158)
T ss_dssp CSS---------CSST-TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred HHH---------HHHh-ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence 000 0011 135789999999994 58999999999999 7999999999997643
No 56
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.56 E-value=4.8e-15 Score=150.62 Aligned_cols=122 Identities=17% Similarity=0.255 Sum_probs=98.5
Q ss_pred CccCHHHHHHHHhCC--CCcEEEEcC--------C-hhhh-hhcCCCCccccccccccccCcccccchhHhhhcCchhhh
Q 011705 270 GDLSPKSTLELLRGK--ENAVLIDVR--------H-EDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELD 337 (479)
Q Consensus 270 g~ISp~El~elL~~~--~~~vLIDVR--------s-~~Ef-~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~ 337 (479)
.-|||+++.++++.. ..+++||++ . ..|| +++|||||+ ++++..+ .+....+.+++|+++.++
T Consensus 28 ~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv---~~Dld~~--~d~~~~~ph~LP~~~~f~ 102 (327)
T 3utn_X 28 DLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSI---FFDIDAI--SDKKSPYPHMFPTKKVFD 102 (327)
T ss_dssp EEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCE---ECCTTTS--SCTTSSSTTCCCCHHHHH
T ss_pred cccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCe---eeChHHh--cCCCCCCCCCCcCHHHHH
Confidence 369999999999633 358899985 2 4577 679999886 4433221 233445677899999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEEEeCCCc-hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 338 DTLTAAVIRNLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 338 ~ll~alGIs~Lk~~~kd~~IVVyC~sG~-rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
+.+.++|| .++++||||++.|. .|.+++|.|+.+|+++|++|+|| .+|+++|+|++.+.
T Consensus 103 ~~l~~lGI------~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~ 162 (327)
T 3utn_X 103 DAMSNLGV------QKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSK 162 (327)
T ss_dssp HHHHHTTC------CTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCC
T ss_pred HHHHHcCC------CCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCC
Confidence 99999999 78999999998776 68999999999999999999977 89999999997643
No 57
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.55 E-value=6.6e-15 Score=149.57 Aligned_cols=190 Identities=16% Similarity=0.134 Sum_probs=121.7
Q ss_pred eccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHHHHHHhcCCCCCCCcchhhHHhhhhhhHHHHHHHH----
Q 011705 188 YGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWW---- 263 (479)
Q Consensus 188 ~G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~qv~~~le~l~~~lg~~~~~PvL~~~v~~g~~~al~l~~~l~---- 263 (479)
=||++..++-++..+- |.....-.|+... +.++.+.+.+|+.++++|++ ++..+..++.+.||
T Consensus 70 ~~HIPGAv~~Dld~~~----d~~~~~ph~LP~~-----~~f~~~l~~lGI~~d~~VVv----YD~~~~~~AaR~wW~Lr~ 136 (327)
T 3utn_X 70 KPRIPNSIFFDIDAIS----DKKSPYPHMFPTK-----KVFDDAMSNLGVQKDDILVV----YDRVGNFSSPRCAWTLGV 136 (327)
T ss_dssp SCBCTTCEECCTTTSS----CTTSSSTTCCCCH-----HHHHHHHHHTTCCTTCEEEE----ECSSSSSSHHHHHHHHHH
T ss_pred hCcCCCCeeeChHHhc----CCCCCCCCCCcCH-----HHHHHHHHHcCCCCCCEEEE----EeCCCCcHHHHHHHHHHH
Confidence 3789988888775321 1111122233332 34555566799999999974 44333333333332
Q ss_pred ---------------HhcCCC--------------------C------ccCHHHHHHHHhCC---CCcEEEEcCChhhhh
Q 011705 264 ---------------TYGGYS--------------------G------DLSPKSTLELLRGK---ENAVLIDVRHEDLRE 299 (479)
Q Consensus 264 ---------------~~~~~~--------------------g------~ISp~El~elL~~~---~~~vLIDVRs~~Ef~ 299 (479)
...++. . .++.+++.+.+.++ ++.+|||+|++.+|.
T Consensus 137 ~Gh~~V~vLdGg~aW~~~g~p~~~~~~~~~~p~p~~~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~ 216 (327)
T 3utn_X 137 MGHPKVYLLNNFNQYREFKYPLDSSKVAAFSPYPKSHYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFE 216 (327)
T ss_dssp TTCSEEEEESCHHHHHHTTCCCBCCCCSCSCSSCCCCCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHH
T ss_pred cCCCceeecccHHHHHHhCCCcccCCccCcCCcCCcccccccccCchheecHHHHhhhhhcccccccceeeccCccceec
Confidence 221211 0 13556777777543 247899999999995
Q ss_pred -----------hcCCCCccccccccccccCcccccchhHhhhcC-chhhhHHHHHHHHhhhccCCCCcEEEEEeCCCchH
Q 011705 300 -----------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRG-GRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRS 367 (479)
Q Consensus 300 -----------~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~-~~~L~~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS 367 (479)
.||||||+ |+|+.++.+.-...++. .+.+...++++.......++++++||+||.+|.+|
T Consensus 217 G~~~ep~~~~r~GHIPGA~--------nlP~~~~ld~~~~~~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA 288 (327)
T 3utn_X 217 GTEPEPRSDIPSGHIPGTQ--------PLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSG 288 (327)
T ss_dssp TSSCCSSSSCCCCBCTTEE--------ECCGGGGSCTTTCCCCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHH
T ss_pred ccccCccccccCCCCCCCc--------ccChhhccCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHH
Confidence 59999999 89987765433333332 23333334333111112347899999999999999
Q ss_pred HHHHHHHHHccCCCEEEecccHHHHHHcCCC
Q 011705 368 KGIARSLRKLGVMRAFLVQGGFQSWVKEGLR 398 (479)
Q Consensus 368 ~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLP 398 (479)
...+..|+.+||++|.+|+|+|.+|.....|
T Consensus 289 ~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 289 VIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 9999999999999999999999999875443
No 58
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.55 E-value=6.5e-15 Score=157.63 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=85.3
Q ss_pred cCCCCccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHH
Q 011705 266 GGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVI 345 (479)
Q Consensus 266 ~~~~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGI 345 (479)
......|+++++.++++ ++.+|||||++.||+.||||||+ |+|+.++...+..
T Consensus 485 ~~~~~~i~~~~~~~~~~--~~~~~iDvR~~~e~~~ghi~ga~--------~ip~~~l~~~~~~----------------- 537 (588)
T 3ics_A 485 DGFVDTVQWHEIDRIVE--NGGYLIDVREPNELKQGMIKGSI--------NIPLDELRDRLEE----------------- 537 (588)
T ss_dssp TTSCCEECTTTHHHHHH--TTCEEEECSCGGGGGGCBCTTEE--------ECCHHHHTTCGGG-----------------
T ss_pred ccccceecHHHHHHHhc--CCCEEEEcCCHHHHhcCCCCCCE--------ECCHHHHHHHHhh-----------------
Confidence 34446799999999985 46899999999999999999999 9998776554432
Q ss_pred hhhccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcC
Q 011705 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (479)
Q Consensus 346 s~Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaG 396 (479)
++++++||+||++|.||..+++.|+..||+ |++|+||+.+|++..
T Consensus 538 -----l~~~~~iv~~C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 538 -----VPVDKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp -----SCSSSCEEEECSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred -----CCCCCeEEEECCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 378999999999999999999999999998 999999999998754
No 59
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.54 E-value=4.1e-15 Score=141.72 Aligned_cols=99 Identities=25% Similarity=0.244 Sum_probs=75.7
Q ss_pred CCCCcEEEEcCChhhhhhcCCCCccccccccccccCcc--cccc-hhHhhhcCchhhhHHHHHHHHhhhccCCCCcEEEE
Q 011705 283 GKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLP--EVGG-SVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIV 359 (479)
Q Consensus 283 ~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~--el~~-~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd~~IVV 359 (479)
++++.+|||+|++.||..||||||+ |+|+. ++.. .....+++++.+++.+..+ +.+++||+
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ivv 66 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGAR--------HLDLSAPKLRLREEAELKALEGGLTELFQTL--------GLRSPVVL 66 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCE--------ECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT--------TCCSSEEE
T ss_pred CCCCEEEEECCChhhHhhCcCCCCE--------ECCccchhcccCCCCCcCCCHHHHHHHHHhc--------CCCCEEEE
Confidence 4568999999999999999999998 78776 4321 1122333344455444433 33789999
Q ss_pred EeCCCc-hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 360 MDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 360 yC~sG~-rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
||++|. +|.++++.|+ +||++|++|+|| |.+ +|+..+.
T Consensus 67 yc~~g~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~~ 105 (230)
T 2eg4_A 67 YDEGLTSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKEE 105 (230)
T ss_dssp ECSSSCHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCSC
T ss_pred EcCCCCccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCCC
Confidence 999999 9999999999 999999999999 977 8886543
No 60
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.50 E-value=2.4e-14 Score=129.71 Aligned_cols=116 Identities=16% Similarity=0.236 Sum_probs=78.9
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccch-----hHhhhcCchhhhHHHHHH
Q 011705 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTAA 343 (479)
Q Consensus 270 g~ISp~El~elL~~~-~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~-----l~~ll~~~~~L~~ll~al 343 (479)
..|+++++.+++.+. ++++|||||++.||+.||||||+ |||+..+... +...+++. ...++.
T Consensus 15 ~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gai--------nip~~~~~~~~~~~~l~~~lp~~--~~~~~~-- 82 (157)
T 1whb_A 15 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLPDD--SKDTWK-- 82 (157)
T ss_dssp SEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCE--------EECSSSCCTTCCHHHHHHSCCTT--HHHHHH--
T ss_pred CccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCc--------ccCHHHccCCCcHHHHHHHCChH--HHHHHH--
Confidence 579999999999533 27999999999999999999999 8887655321 22222211 111111
Q ss_pred HHhhhccCCCCcEEEEEeCCCch----HHHHHHHHHH----c----cCCC-EEEecccHHHHHHcCCCcccccc
Q 011705 344 VIRNLKIVQDRSKVIVMDADGTR----SKGIARSLRK----L----GVMR-AFLVQGGFQSWVKEGLRIKELKS 404 (479)
Q Consensus 344 GIs~Lk~~~kd~~IVVyC~sG~r----S~~AA~~L~~----~----Gf~n-V~vL~GG~~aW~aaGLPV~~~~p 404 (479)
+..+...||+||..|.+ +..+++.|.. . ||.+ |++|+|||.+|++. +|.....+
T Consensus 83 ------~~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~ 149 (157)
T 1whb_A 83 ------KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNA 149 (157)
T ss_dssp ------GGGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCC
T ss_pred ------hcCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCC
Confidence 11234569999988764 3445666652 2 4554 99999999999985 88766443
No 61
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.50 E-value=4.9e-14 Score=128.08 Aligned_cols=114 Identities=18% Similarity=0.258 Sum_probs=76.8
Q ss_pred CccCHHHHHHHHhCC-CCcEEEEcCChhhhhhcCCCCccccccccccccCcccccch-----hHhhhcCchhhhHHHHHH
Q 011705 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTAA 343 (479)
Q Consensus 270 g~ISp~El~elL~~~-~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~-----l~~ll~~~~~L~~ll~al 343 (479)
..|+++++.+++.+. ++++|||||++.||+.||||||+ |||+..+... +...++ +.....+
T Consensus 20 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAi--------nip~~~l~~~~~~~~l~~~lp--~~~~~l~--- 86 (157)
T 2gwf_A 20 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLP--DDSKDTW--- 86 (157)
T ss_dssp CEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCE--------ECCGGGCCTTCCHHHHHHTSC--HHHHHHH---
T ss_pred CccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCc--------ccCHHHcCCCCcHHHHHHHcC--HHHHHHH---
Confidence 469999999999643 27999999999999999999999 8997655321 222221 1111111
Q ss_pred HHhhhccCCCCcEEEEEeCCCch----HHHHHHHHH----Hc----cCCC-EEEecccHHHHHHcCCCcccc
Q 011705 344 VIRNLKIVQDRSKVIVMDADGTR----SKGIARSLR----KL----GVMR-AFLVQGGFQSWVKEGLRIKEL 402 (479)
Q Consensus 344 GIs~Lk~~~kd~~IVVyC~sG~r----S~~AA~~L~----~~----Gf~n-V~vL~GG~~aW~aaGLPV~~~ 402 (479)
.+..+...||+||.+|.+ +..+++.|. .. ||.+ |++|+|||.+|++. +|....
T Consensus 87 -----~~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~ 152 (157)
T 2gwf_A 87 -----KKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT 152 (157)
T ss_dssp -----HTTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBS
T ss_pred -----HhcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcC
Confidence 111344569999988764 234555554 22 4554 99999999999984 887653
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.44 E-value=7.8e-15 Score=154.39 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhccCCCCcE
Q 011705 277 TLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSK 356 (479)
Q Consensus 277 l~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd~~ 356 (479)
+.+++ ++++.+|||||++.||..||||||+ |+|+.++...+.+ ++++++
T Consensus 379 ~~~~~-~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~----------------------l~~~~~ 427 (466)
T 3r2u_A 379 HSEDI-TGNESHILDVRNDNEWNNGHLSQAV--------HVPHGKLLETDLP----------------------FNKNDV 427 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHH-hCCCcEEEEeCCHHHHhcCcCCCCE--------ECCHHHHHHHHhh----------------------CCCCCe
Confidence 44445 3467899999999999999999999 9998776544332 278899
Q ss_pred EEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHH
Q 011705 357 VIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 394 (479)
Q Consensus 357 IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~a 394 (479)
||+||++|.||..+++.|+.+||++|++|+||+.+|++
T Consensus 428 iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 428 IYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp --------------------------------------
T ss_pred EEEECCCChHHHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence 99999999999999999999999999999999999975
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=5.2e-13 Score=139.93 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=83.2
Q ss_pred CCccCHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCccc-ccchhHhhhcCchhhhHHHHHHHHhh
Q 011705 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRN 347 (479)
Q Consensus 269 ~g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~e-l~~~l~~ll~~~~~L~~ll~alGIs~ 347 (479)
...|+++++.+++.+ + +|||+|++.+|..||||||+ |+|+.. +...++++
T Consensus 272 ~~~is~~~l~~~l~~--~-~iiD~R~~~~y~~ghIpGA~--------~i~~~~~~~~~~~~l------------------ 322 (474)
T 3tp9_A 272 RVDLPPERVRAWREG--G-VVLDVRPADAFAKRHLAGSL--------NIPWNKSFVTWAGWL------------------ 322 (474)
T ss_dssp ECCCCGGGHHHHHHT--S-EEEECSCHHHHHHSEETTCE--------ECCSSTTHHHHHHHH------------------
T ss_pred CceeCHHHHHHHhCC--C-EEEECCChHHHhccCCCCeE--------EECcchHHHHHHHhc------------------
Confidence 357999999999964 4 99999999999999999999 888743 33332221
Q ss_pred hccCCCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHHcCCCccccc
Q 011705 348 LKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (479)
Q Consensus 348 Lk~~~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~ 403 (479)
.+++++||+||..|. +.++++.|+.+||++|+.+.+|+.+|..+|+|+...+
T Consensus 323 ---~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~ 374 (474)
T 3tp9_A 323 ---LPADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYA 374 (474)
T ss_dssp ---CCSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCE
T ss_pred ---CCCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhccccccccc
Confidence 157889999999876 6669999999999999987779999999998887543
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.92 E-value=7.6e-10 Score=116.40 Aligned_cols=80 Identities=8% Similarity=0.000 Sum_probs=61.0
Q ss_pred CCCcEEEEcCChhhhhhcCCCCccccccccccccCccc-ccchhHhhhcCchhhhHHHHHHHHhhhccCCCCcEEEEEeC
Q 011705 284 KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDA 362 (479)
Q Consensus 284 ~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~e-l~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~kd~~IVVyC~ 362 (479)
+++++|||+|++.+|.+||||||+ |+|+.. +....+++ ++++++||+||.
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv--------~ip~~~~~~~~~~~~---------------------~~~~~~vvly~~ 344 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTI--------NIPYDKNFINQIGWY---------------------LNYDQEINLIGD 344 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCE--------ECCSSTTHHHHHTTT---------------------CCTTSCEEEESC
T ss_pred CCCeEEEECCCHHHHhhCCCCCcE--------ECCccHHHHHHHHhc---------------------cCCCCeEEEEEC
Confidence 367899999999999999999999 888742 33222221 268899999999
Q ss_pred CCchHHHHHHHHHHccCCCEEE-ecccHHHHH
Q 011705 363 DGTRSKGIARSLRKLGVMRAFL-VQGGFQSWV 393 (479)
Q Consensus 363 sG~rS~~AA~~L~~~Gf~nV~v-L~GG~~aW~ 393 (479)
+.++.++++.|+.+||++|+. ++|+...|.
T Consensus 345 -~~~a~~a~~~L~~~G~~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 345 -YHLVSKATHTLQLIGYDDIAGYQLPQSKIQT 375 (466)
T ss_dssp -HHHHHHHHHHHHTTTCCCEEEEECCC-----
T ss_pred -CchHHHHHHHhhhhhcccccccccCcccccH
Confidence 568999999999999999997 666655443
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=95.98 E-value=0.014 Score=51.94 Aligned_cols=104 Identities=12% Similarity=0.090 Sum_probs=56.6
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhh------------hhc-CCCCccccccccccccCcccccchhHhhhcCchhh
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLR------------ERD-GIPDLRRGARFRYASVYLPEVGGSVKKLLRGGREL 336 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef------------~~g-HIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L 336 (479)
+.++++++..+.+ ..-..|||+|++.|. .+. ||+|.. ++|+.... +.++.+
T Consensus 28 ~~~~~~d~~~L~~-~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~--------~iPv~~~~-------~~~~~~ 91 (156)
T 2f46_A 28 PQLTKADAEQIAQ-LGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFH--------HQPVTARD-------IQKHDV 91 (156)
T ss_dssp SCCCGGGHHHHHH-HTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEE--------ECCCCTTT-------CCHHHH
T ss_pred CCCCHHHHHHHHH-CCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhhe--------ECccCCCC-------CCHHHH
Confidence 3578888877653 334689999987662 222 466555 77764321 011112
Q ss_pred hHHHHHHHHhhhccCCCCcEEEEEeCCCchHHHHHHH-HHHccCCCEEEecccHHHHHHcCCCcc
Q 011705 337 DDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARS-LRKLGVMRAFLVQGGFQSWVKEGLRIK 400 (479)
Q Consensus 337 ~~ll~alGIs~Lk~~~kd~~IVVyC~sG~rS~~AA~~-L~~~Gf~nV~vL~GG~~aW~aaGLPV~ 400 (479)
.+.+.. +. ..+.+|+|+|..|.|+..++.. +...|.. .+.=+..-++.|+.+.
T Consensus 92 ~~~~~~-----l~--~~~~pVlvHC~sG~Rs~~l~al~l~~~g~~----~~~a~~~~~~~g~~l~ 145 (156)
T 2f46_A 92 ETFRQL-----IG--QAEYPVLAYCRTGTRCSLLWGFRRAAEGMP----VDEIIRRAQAAGVNLE 145 (156)
T ss_dssp HHHHHH-----HH--TSCSSEEEECSSSHHHHHHHHHHHHHTTCC----HHHHHHHHHHTTCCCG
T ss_pred HHHHHH-----HH--hCCCCEEEECCCCCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCCcH
Confidence 221111 11 3578999999999988754433 2444543 2222334445565443
No 66
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=74.36 E-value=8 Score=33.02 Aligned_cols=27 Identities=33% Similarity=0.473 Sum_probs=19.4
Q ss_pred CCcEEEEEeCCC-chHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADG-TRSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG-~rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|+|..| .||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 567999999999 58754 3455565564
No 67
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=72.54 E-value=2.8 Score=36.04 Aligned_cols=27 Identities=22% Similarity=0.059 Sum_probs=19.0
Q ss_pred CCcEEEEEeCCCc-hHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||..+ +..+...|.
T Consensus 88 ~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~ 117 (157)
T 3rgo_A 88 LGQCVYVHCKAGRSRSATMVAAYLIQVHNW 117 (157)
T ss_dssp TTCEEEEESSSSSSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 4679999999998 87654 333444555
No 68
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=72.40 E-value=10 Score=32.60 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=18.9
Q ss_pred CCcEEEEEeCCCc-hHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||..+ +..+...|.
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~ 118 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGM 118 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCC
Confidence 5679999999994 87653 344455665
No 69
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=69.16 E-value=12 Score=31.58 Aligned_cols=90 Identities=18% Similarity=0.159 Sum_probs=43.5
Q ss_pred CHHHHHHHHhCCCCcEEEEcCChhhhhhcCCCCccccccccccccCcccccchhHhhhcCchhhhHHHHHHHHhhhccCC
Q 011705 273 SPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQ 352 (479)
Q Consensus 273 Sp~El~elL~~~~~~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~~~l~~ll~~~~~L~~ll~alGIs~Lk~~~ 352 (479)
+++++..+.+ ..=..|||+|++.+......+|-. +.++|+.+.... +.+.+.+.+....- . ..
T Consensus 24 ~~~~~~~L~~-~gi~~Vi~l~~~~~~~~~~~~~~~------~~~~~~~d~~~~------~~~~~~~~~~~i~~--~--~~ 86 (150)
T 4erc_A 24 LPAHYQFLLD-LGVRHLVSLTERGPPHSDSCPGLT------LHRLRIPDFCPP------APDQIDRFVQIVDE--A--NA 86 (150)
T ss_dssp SHHHHHHHHH-TTEEEEEECSSSCCTTGGGCTTSE------EEECCCCTTSCC------CHHHHHHHHHHHHH--H--HH
T ss_pred CHHHHHHHHH-CCCCEEEEcCCCCCCcccccCCce------EEEEecCCCCCC------CHHHHHHHHHHHHH--H--HH
Confidence 4666655543 344689999997654433333321 223444332110 11111211111100 0 13
Q ss_pred CCcEEEEEeCCCc-hHHH-HHHH-HHHccC
Q 011705 353 DRSKVIVMDADGT-RSKG-IARS-LRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~-AA~~-L~~~Gf 379 (479)
.+.+|+|.|..|. |+.. ++.. +...|.
T Consensus 87 ~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~ 116 (150)
T 4erc_A 87 RGEAVGVHCALGFGRTGTMLACYLVKERGL 116 (150)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5679999999997 7764 3333 344554
No 70
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=67.91 E-value=1.7 Score=43.06 Aligned_cols=48 Identities=13% Similarity=0.067 Sum_probs=25.7
Q ss_pred ccCCCCCCCchHH---HhhhhhHhhh--hhcccccchHHHHHHHHHHHHHhcCC
Q 011705 189 GTTKESLPPEIRD---ALNLYEDRAV--KLWRPVGSALQQVSVAIEGLERSLGF 237 (479)
Q Consensus 189 G~~~~~l~p~~~~---~~~~~e~~~~--~v~~p~g~~~~qv~~~le~l~~~lg~ 237 (479)
+|||+|++|+..+ ...+|++.+. .+++|+.+... ..++.|.++-++|+
T Consensus 187 t~Cy~Cl~p~~~~~~~~~~~~~~~gvc~~~l~~~~g~vg-slqA~EalK~L~g~ 239 (292)
T 3h8v_A 187 SACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVA-GILVQNVLKFLLNF 239 (292)
T ss_dssp SCCTTSSSCCCCCCC-------CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTC
T ss_pred CCCHhhcCCccccccccccchhhcCcccCCcchHHHHHH-HHHHHHHHHHHhCC
Confidence 4899999996532 1235666552 23555555555 44566666655554
No 71
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=67.05 E-value=7.2 Score=33.42 Aligned_cols=27 Identities=26% Similarity=0.169 Sum_probs=19.2
Q ss_pred CCcEEEEEeCCCc-hHH-HH-HHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSK-GI-ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~-~A-A~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||. .+ +..+...|.
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~ 113 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHL 113 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5789999999994 876 33 445566665
No 72
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=65.85 E-value=14 Score=32.26 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=19.6
Q ss_pred CCcEEEEEeCCCc-hHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||..+ +..+...|.
T Consensus 88 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 88 DGGSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp TTCEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 5689999999995 87643 455666665
No 73
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=60.63 E-value=7.3 Score=33.39 Aligned_cols=27 Identities=11% Similarity=0.071 Sum_probs=18.9
Q ss_pred CCcEEEEEeCCCc-hHHHHH-HHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKGIA-RSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~AA-~~L~~~Gf 379 (479)
.+.+|+|+|..|. |+..++ ..|...|.
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~ 119 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKW 119 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 4679999999997 876654 33455554
No 74
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=57.92 E-value=17 Score=31.54 Aligned_cols=27 Identities=26% Similarity=0.381 Sum_probs=18.9
Q ss_pred CCcEEEEEeCCC-chHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG-~rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|+|..| .||..+ +..+...|.
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~ 112 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGL 112 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 467999999999 487643 444455565
No 75
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=54.37 E-value=29 Score=30.30 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=18.4
Q ss_pred CCcEEEEEeCCCc-hHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||..+ |..+...|.
T Consensus 82 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 82 RGESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5679999999994 87663 344444443
No 76
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=53.95 E-value=2 Score=39.25 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=21.0
Q ss_pred cEEEEcCChhhhhhcCCCCccccccccccccCccccc
Q 011705 287 AVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG 323 (479)
Q Consensus 287 ~vLIDVRs~~Ef~~gHIPGA~~av~~~~~nIPl~el~ 323 (479)
.++||||.+.||+ |||. |+|...+.
T Consensus 122 ~~liDvRe~~E~~----pgA~--------~iprg~lE 146 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSL--------SIPQLRVE 146 (168)
T ss_dssp TEEEEEEEEEEEE----ETTE--------EEEEEEEE
T ss_pred eEEEECCChhhcC----CCCE--------EcChhHHH
Confidence 5999999999998 9998 88865443
No 77
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=53.56 E-value=25 Score=29.89 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=18.9
Q ss_pred CCcEEEEEeCCC-chHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG-~rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|+|..| .||..+ +..+...|.
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 567999999999 487654 344455554
No 78
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=53.09 E-value=33 Score=28.70 Aligned_cols=18 Identities=28% Similarity=0.106 Sum_probs=14.3
Q ss_pred CCcEEEEEeCCCc-hHHHH
Q 011705 353 DRSKVIVMDADGT-RSKGI 370 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A 370 (479)
.+.+|+|.|..|. |+..+
T Consensus 88 ~~~~vlVHC~aG~~Rsg~~ 106 (151)
T 2img_A 88 RGEAVGVHCALGFGRTGTM 106 (151)
T ss_dssp TTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEECCCCCChHHHH
Confidence 4679999999986 76554
No 79
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=52.60 E-value=19 Score=30.48 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=18.8
Q ss_pred CCcEEEEEeCCCc-hHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|.|..|. ||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~ 109 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRV 109 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5679999999997 7653 3444455665
No 80
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=50.74 E-value=38 Score=30.30 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=18.9
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChh
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHED 296 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~ 296 (479)
+.-+.++..+++.+..-..|||++++.
T Consensus 46 ~~~t~~~~~~~L~~~gi~~Iv~l~~~~ 72 (189)
T 3rz2_A 46 TNATLNKFIEELKKYGVTTIVRVCEAT 72 (189)
T ss_dssp CTTTHHHHHHHHHTTTEEEEEECSCCC
T ss_pred CcccHHHHHHHHHHcCCcEEEEeCCCc
Confidence 455677777777654446899999754
No 81
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=48.07 E-value=29 Score=31.24 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=19.6
Q ss_pred CCcEEEEEeCCC-chHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADG-TRSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG-~rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|+|..| .||.. +|..+...|.
T Consensus 96 ~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~ 125 (188)
T 2esb_A 96 KQGRTLLHCAAGVSRSAALCLAYLMKYHAM 125 (188)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHcCC
Confidence 577999999999 48764 3455566665
No 82
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=47.80 E-value=24 Score=32.12 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=19.0
Q ss_pred CCcEEEEEeCCCc-hHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|.|..|. ||.. +|..++..|.
T Consensus 116 ~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 116 KREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp TTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5678999999996 7655 3445555554
No 83
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=47.53 E-value=64 Score=31.51 Aligned_cols=30 Identities=20% Similarity=0.143 Sum_probs=21.4
Q ss_pred CccCHHHHHHHHhCCCCcEEEEcCChhhhhh
Q 011705 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRER 300 (479)
Q Consensus 270 g~ISp~El~elL~~~~~~vLIDVRs~~Ef~~ 300 (479)
..++++++..+.+ -.=-.|||.|++.|...
T Consensus 54 ~~lt~~d~~~L~~-lGI~tVIDLR~~~E~~~ 83 (296)
T 1ywf_A 54 SRLDDAGRATLRR-LGITDVADLRSSREVAR 83 (296)
T ss_dssp TTCCHHHHHHHHH-HTCCEEEECCCHHHHHH
T ss_pred ccCCHHHHHHHHh-CCCCEEEECcChhhhhc
Confidence 4678888766542 33468999999888654
No 84
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=47.28 E-value=8.6 Score=38.74 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=26.5
Q ss_pred ccCCCCCCCc--hHH-----------HhhhhhHhhhhhcccccchHHHHHHHHHHHHHhcCC
Q 011705 189 GTTKESLPPE--IRD-----------ALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (479)
Q Consensus 189 G~~~~~l~p~--~~~-----------~~~~~e~~~~~v~~p~g~~~~qv~~~le~l~~~lg~ 237 (479)
++||+|++|. ..+ .+..|.+.+ +++|+.+.+. ..++.|.++-+.|+
T Consensus 258 ~~C~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~g--v~~~~~~iig-~l~a~Ealk~l~g~ 316 (353)
T 3h5n_A 258 TGCYECQKVVADLYGSEKENIDHKIKLINSRFKPA--TFAPVNNVAA-ALCAADVIKFIGKY 316 (353)
T ss_dssp SCCTTTTC---------CHHHHHHHHHHHHTCCCC--CCHHHHHHHH-HHHHHHHHHHHHCS
T ss_pred CCChhhcCCCcCCCccccchhhhhhhhhcccccCC--chhhHHHHHH-HHHHHHHHHHhcCC
Confidence 6999999872 221 222333455 6777666666 56666776666664
No 85
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=47.26 E-value=6.5 Score=39.90 Aligned_cols=48 Identities=17% Similarity=0.010 Sum_probs=32.4
Q ss_pred ccCCCCCCCchHH-Hh-hhhhHhhhhhcccccchHHHHHHHHHHHHHhcCC
Q 011705 189 GTTKESLPPEIRD-AL-NLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (479)
Q Consensus 189 G~~~~~l~p~~~~-~~-~~~e~~~~~v~~p~g~~~~qv~~~le~l~~~lg~ 237 (479)
++||+|++|..+. .. +.+-+..-.|++|.-+..+ ..+++|.++.++|+
T Consensus 193 ~~Cy~C~~~~~p~~~~~~~t~~~~c~v~~p~vg~ig-s~qA~E~lk~l~~~ 242 (340)
T 3rui_A 193 LGCYFCHDVVAPTDSLTDRTLDQMSTVTRPGVAMMA-SSLAVELMTSLLQT 242 (340)
T ss_dssp BCCGGGGSSSCCCCCTTTCCCGGGGGCSCHHHHHHH-HHHHHHHHHHHTSC
T ss_pred CCeeeeCCCCCCcccccccccCCCcceecchHHHHH-HHHHHHHHHHHhCC
Confidence 5999999754432 11 1000111239999999998 88899999999886
No 86
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=47.18 E-value=40 Score=31.39 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=19.8
Q ss_pred CCcEEEEEeCCCc-hHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||.. +|+.++..|.
T Consensus 82 ~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 82 KGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 5679999999995 8754 4555666675
No 87
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=46.50 E-value=26 Score=31.61 Aligned_cols=27 Identities=30% Similarity=0.292 Sum_probs=19.5
Q ss_pred CCcEEEEEeCCCc-hHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||.. ++..+...|.
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~ 131 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNV 131 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4678999999994 8764 3455666665
No 88
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=45.67 E-value=33 Score=29.11 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=18.9
Q ss_pred CCcEEEEEeCCCc-hHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|.|..|. ||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~ 109 (144)
T 3s4e_A 80 KDGVVLVHSNAGVSRAAAIVIGFLMNSEQT 109 (144)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEEcCCCCchHHHHHHHHHHHHcCC
Confidence 5678999999997 7644 3444555665
No 89
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=45.18 E-value=34 Score=33.34 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=32.8
Q ss_pred cEEEEEeCCCc---hHHHHHHHHHHccCCCEEEe-cc---------cHHHHHHcCCCcc
Q 011705 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG---------GFQSWVKEGLRIK 400 (479)
Q Consensus 355 ~~IVVyC~sG~---rS~~AA~~L~~~Gf~nV~vL-~G---------G~~aW~aaGLPV~ 400 (479)
++|+|+|..|+ ....+|+.|...||+ |.++ -+ -++.|++.|.++.
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~~~~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIYYPKRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCSCCSSHHHHHHHHHHHHTTCCBC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEEEeCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999887 567899999999994 5544 22 2346677777664
No 90
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=45.01 E-value=69 Score=28.07 Aligned_cols=26 Identities=23% Similarity=0.319 Sum_probs=18.7
Q ss_pred CcEEEEEeCCCc-hHHH-H-HHHHHHccC
Q 011705 354 RSKVIVMDADGT-RSKG-I-ARSLRKLGV 379 (479)
Q Consensus 354 d~~IVVyC~sG~-rS~~-A-A~~L~~~Gf 379 (479)
+.+|+|.|..|. ||.. + +..+...|.
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 679999999996 7765 3 344456665
No 91
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=42.28 E-value=38 Score=32.45 Aligned_cols=45 Identities=16% Similarity=0.170 Sum_probs=33.2
Q ss_pred cEEEEEeCCCc---hHHHHHHHHHHccCCCEEEe-ccc----------HHHHHHcCCCcc
Q 011705 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QGG----------FQSWVKEGLRIK 400 (479)
Q Consensus 355 ~~IVVyC~sG~---rS~~AA~~L~~~Gf~nV~vL-~GG----------~~aW~aaGLPV~ 400 (479)
++|+|+|..|+ ....+|+.|...|| +|.++ -+. ++.|++.|.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGY-NPVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTC-CEEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCC-eEEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999887 46789999999999 45543 221 456777787764
No 92
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=42.03 E-value=46 Score=29.44 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=18.9
Q ss_pred CCcEEEEEeCCCc-hHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|+|..|. ||..+ +..+...|.
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 5679999999994 87663 344445565
No 93
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=41.03 E-value=29 Score=30.38 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=19.2
Q ss_pred CCcEEEEEeCCCc-hHHH--HHHHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~--AA~~L~~~Gf 379 (479)
.+.+|+|.|..|. ||.. +|..+...|.
T Consensus 86 ~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~ 115 (161)
T 3emu_A 86 RKEGVLIISGTGVNKAPAIVIAFLMYYQRL 115 (161)
T ss_dssp TTCEEEEEESSSSSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEEcCCCCcHHHHHHHHHHHHHhCC
Confidence 4579999999997 7644 3455566665
No 94
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=40.46 E-value=21 Score=31.84 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=29.4
Q ss_pred CCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHH
Q 011705 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (479)
Q Consensus 352 ~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~ 390 (479)
.++.+++|+|++-..+..++..|+..|+ .+..+.|++.
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 81 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCC
Confidence 3567899999998888999999999998 6888999874
No 95
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=39.88 E-value=28 Score=33.67 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=24.2
Q ss_pred cEEEEEeCCCc---hHHHHHHHHHHccCCCEEEe
Q 011705 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV 385 (479)
Q Consensus 355 ~~IVVyC~sG~---rS~~AA~~L~~~Gf~nV~vL 385 (479)
++|+|+|..|+ ....+|+.|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999999887 467899999999995 5543
No 96
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=39.76 E-value=38 Score=30.79 Aligned_cols=45 Identities=31% Similarity=0.501 Sum_probs=35.4
Q ss_pred hhhccCCCCcEEEEEeCCCc--hHHHHHHHHHH---ccCCCEEEecccHH
Q 011705 346 RNLKIVQDRSKVIVMDADGT--RSKGIARSLRK---LGVMRAFLVQGGFQ 390 (479)
Q Consensus 346 s~Lk~~~kd~~IVVyC~sG~--rS~~AA~~L~~---~Gf~nV~vL~GG~~ 390 (479)
+-++.++++..+|++|..|. .|...|..|.. .|..++..+-||-.
T Consensus 66 ~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 66 RILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 33556678889999998887 68888888865 68888999999853
No 97
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=36.84 E-value=41 Score=28.83 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=34.2
Q ss_pred CCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHHHHHH
Q 011705 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 394 (479)
Q Consensus 352 ~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~aW~a 394 (479)
+++-+|+|++.+..........|+..||..|.....|.++|..
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~ 52 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPM 52 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHH
Confidence 4566789998876666677888999999888888888888754
No 98
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=36.83 E-value=42 Score=29.40 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=31.8
Q ss_pred CCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHH
Q 011705 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (479)
Q Consensus 353 kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~ 390 (479)
+..+++|+|++-..+..++..|...|+ ++..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 66 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGMP 66 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCCC
Confidence 456899999998889999999999999 6888999863
No 99
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=36.70 E-value=32 Score=34.09 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=24.2
Q ss_pred cEEEEEeCCCc---hHHHHHHHHHHccCCCEEEe
Q 011705 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV 385 (479)
Q Consensus 355 ~~IVVyC~sG~---rS~~AA~~L~~~Gf~nV~vL 385 (479)
.+|+|+|..|+ ....+|+.|...||+ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 58999999887 567899999999994 5543
No 100
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=35.95 E-value=36 Score=29.37 Aligned_cols=36 Identities=17% Similarity=0.317 Sum_probs=31.2
Q ss_pred CCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccH
Q 011705 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (479)
Q Consensus 353 kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~ 389 (479)
...+++|+|++-..+..++..|...|+ ++..+.|++
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~ 69 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGM 69 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 345799999998889999999999999 688899986
No 101
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=35.38 E-value=75 Score=26.67 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=18.9
Q ss_pred CCCcEEEEEeCCCc-hHHHH-HHHHHHccC
Q 011705 352 QDRSKVIVMDADGT-RSKGI-ARSLRKLGV 379 (479)
Q Consensus 352 ~kd~~IVVyC~sG~-rS~~A-A~~L~~~Gf 379 (479)
+++.+|+|.|..|. |+..+ +..|...|.
T Consensus 94 ~~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 94 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 45689999999995 76553 444544454
No 102
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=35.23 E-value=50 Score=30.00 Aligned_cols=24 Identities=25% Similarity=0.173 Sum_probs=17.0
Q ss_pred CCcEEEEEeCCCc-hHHHH-HHHHHH
Q 011705 353 DRSKVIVMDADGT-RSKGI-ARSLRK 376 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A-A~~L~~ 376 (479)
.+.+|+|.|..|. |+..+ +..|..
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~ 157 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLY 157 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 5678999999997 76554 444544
No 103
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=34.81 E-value=38 Score=35.91 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=34.9
Q ss_pred CCcEEEEEeCCCc---hHHHHHHHHHHccCCCEEE--eccc--------HHHHHHcCCCcc
Q 011705 353 DRSKVIVMDADGT---RSKGIARSLRKLGVMRAFL--VQGG--------FQSWVKEGLRIK 400 (479)
Q Consensus 353 kd~~IVVyC~sG~---rS~~AA~~L~~~Gf~nV~v--L~GG--------~~aW~aaGLPV~ 400 (479)
+.++|+|+|..|+ ....+|+.|...||+ |.+ +... ++.|++.|.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4678999999887 467889999999994 443 3221 467888888775
No 104
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=33.58 E-value=17 Score=39.83 Aligned_cols=48 Identities=15% Similarity=-0.020 Sum_probs=31.9
Q ss_pred ccCCCCCCCchHH-H-hhhhhHhhhhhcccccchHHHHHHHHHHHHHhcCC
Q 011705 189 GTTKESLPPEIRD-A-LNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (479)
Q Consensus 189 G~~~~~l~p~~~~-~-~~~~e~~~~~v~~p~g~~~~qv~~~le~l~~~lg~ 237 (479)
++||+|++|..+. . .+.+-+..-.|++|.-+.++ ..+++|.++.++|+
T Consensus 485 ~~CY~Cl~~~~P~~~~~~rtl~~~C~Vl~P~vgiig-s~qA~EaLk~Ll~~ 534 (615)
T 4gsl_A 485 LGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMA-SSLAVELMTSLLQT 534 (615)
T ss_dssp CCCTTTSCSSCTTSCTTTTTTTCTTCCCCHHHHHHH-HHHHHHHHHHHHSC
T ss_pred CCceeeCCCCCCcccccccccccCcceecchHHHHH-HHHHHHHHHHHhCC
Confidence 5899999754432 1 11000111228999988888 88899999998885
No 105
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=32.27 E-value=31 Score=30.11 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=31.6
Q ss_pred CCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccH
Q 011705 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (479)
Q Consensus 353 kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~ 389 (479)
+..+++|+|++-..+..++..|...|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 456899999998888999999999998 688899986
No 106
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=31.48 E-value=93 Score=26.30 Aligned_cols=25 Identities=20% Similarity=0.129 Sum_probs=17.0
Q ss_pred CCcEEEEEeCCCc-hHHHH-HHHHHHc
Q 011705 353 DRSKVIVMDADGT-RSKGI-ARSLRKL 377 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~A-A~~L~~~ 377 (479)
++.+|+|.|..|. |+..+ +..|...
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~ 134 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEY 134 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHh
Confidence 4779999999986 76543 3444443
No 107
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=28.86 E-value=43 Score=28.82 Aligned_cols=36 Identities=6% Similarity=0.135 Sum_probs=31.3
Q ss_pred CCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccH
Q 011705 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (479)
Q Consensus 353 kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~ 389 (479)
+..+++|+|++-..+...+..|...|+ .+..+.|++
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 64 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDL 64 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 456899999998888999999999998 688899986
No 108
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=28.56 E-value=62 Score=34.15 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=69.1
Q ss_pred CchhhhhhhhhhHHhhhhhhhhhhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhccccCCcCCCcccc
Q 011705 68 NSSISNIKSSFDDFLAGVNESFSSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNF 147 (479)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 147 (479)
=.++==+-=.+.|+|-.-+..+.+.|..-|+.|++ +...|++++..++..+..+...=...... | ..++..
T Consensus 72 fG~yCPTtCglad~L~kye~~V~~dl~~Le~~l~~-isn~Ts~a~~~v~~ik~s~~~~q~~~~~n-~-------~~~~~s 142 (461)
T 3ghg_B 72 LGVLCPTGCQLQEALLQQERPIRNSVDELNNNVEA-VSQTSSSSFQYMYLLKDLWQKRQKQVKDN-E-------NVVNEY 142 (461)
T ss_dssp TCBCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHH-H-------HTTSCH
T ss_pred cCCcCCCcchHHHHHHhcccchhhHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhccccCCCCcc-h-------hHHHHH
Confidence 34555566678899999999999999999999998 88888888888877776655443332222 1 122333
Q ss_pred cchh-------HHHhhhccchhHHHHHHHHHHhhhhccc
Q 011705 148 STDL-------KEASSKATVAAVDVLRNTIVALEESMTN 179 (479)
Q Consensus 148 ~~~~-------~~~~~~a~~~~~d~l~~~~~~~~~~~~~ 179 (479)
+..| ++.+...-+-++++||..+..+..-|.+
T Consensus 143 ~~mle~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~i~~ 181 (461)
T 3ghg_B 143 SSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQK 181 (461)
T ss_dssp HHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHHHHH
Confidence 3333 3346666777888888777665555443
No 109
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=27.45 E-value=15 Score=34.88 Aligned_cols=30 Identities=13% Similarity=0.086 Sum_probs=11.8
Q ss_pred ccCCCCCCCchHHHhhhhhHhhhhhcccccch
Q 011705 189 GTTKESLPPEIRDALNLYEDRAVKLWRPVGSA 220 (479)
Q Consensus 189 G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~ 220 (479)
++|++|++|+..+....|.+.+ +++|+.+.
T Consensus 167 ~~c~~cl~~~~~~~~~~~~~~g--~~~p~~~~ 196 (251)
T 1zud_1 167 QGCYRCLWPDNQEPERNCRTAG--VVGPVVGV 196 (251)
T ss_dssp TCCHHHHCC-----------CC--BCHHHHHH
T ss_pred CCcEEEeCCCCCCCCCccccCC--chHHHHHH
Confidence 5799999886443222344333 44444333
No 110
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=27.25 E-value=60 Score=29.46 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=31.1
Q ss_pred CCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccH
Q 011705 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (479)
Q Consensus 353 kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~ 389 (479)
...+++|+|++-..+..++..|...|+ .+..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~lhg~~ 65 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDL 65 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 456899999987788889999999999 688899985
No 111
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=26.91 E-value=17 Score=28.66 Aligned_cols=47 Identities=4% Similarity=0.065 Sum_probs=33.0
Q ss_pred hhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhccc
Q 011705 90 SSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQT 136 (479)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (479)
...+.+..+.+++-++.+.+.+......|.+.-..++...|...++.
T Consensus 18 A~~~~~~~~~i~~~l~~L~~~v~~L~~~W~G~a~~af~~~~~~~~~~ 64 (99)
T 3zbh_A 18 ARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPS 64 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHH
Confidence 34455555666666777777777777788888878887777776643
No 112
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=26.86 E-value=1.1e+02 Score=27.11 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=46.2
Q ss_pred CCcEEEEEeCCCc----hHHHHHHHHHHccCCCEEEecccHHHHHHcCCCcccccccchhhhchhhHHHHHhhhcCCchh
Q 011705 353 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 428 (479)
Q Consensus 353 kd~~IVVyC~sG~----rS~~AA~~L~~~Gf~nV~vL~GG~~aW~aaGLPV~~~~p~~~l~~~~e~~e~i~~di~~~p~~ 428 (479)
.+.+.||++.+.. .-...+..|...|| +|..++= ...|..-........+.-+-++..++++.+...+..
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~-----~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGY-RVIAVDQ-----VGFCKSSKPAHYQYSFQQLAANTHALLERLGVARAS 117 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC-----TTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCC-eEEEeec-----CCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceE
Confidence 4456666665533 12446677888899 5666651 111211111111223333345666777777777877
Q ss_pred hHHHHHHHHHHHHHH
Q 011705 429 FLGFGVGCFAVLYVL 443 (479)
Q Consensus 429 ~~~~~~g~~a~~~a~ 443 (479)
++|+-.|..-++.+.
T Consensus 118 l~G~S~Gg~~a~~~a 132 (315)
T 4f0j_A 118 VIGHSMGGMLATRYA 132 (315)
T ss_dssp EEEETHHHHHHHHHH
T ss_pred EEEecHHHHHHHHHH
Confidence 788888776444333
No 113
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=26.83 E-value=1.2e+02 Score=27.31 Aligned_cols=27 Identities=26% Similarity=0.215 Sum_probs=17.6
Q ss_pred CCcEEEEEeCCCc-hHHHHH--HHHHHccC
Q 011705 353 DRSKVIVMDADGT-RSKGIA--RSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~AA--~~L~~~Gf 379 (479)
.+.+|+|.|..|. |+..++ ..+...|.
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~ 153 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMILAYLMSKNKE 153 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCCS
T ss_pred cCCcEEEEcCCCCChHHHHHHHHHHHHhCC
Confidence 4678999999994 775543 23334454
No 114
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=26.61 E-value=12 Score=35.57 Aligned_cols=45 Identities=11% Similarity=0.094 Sum_probs=20.2
Q ss_pred ccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHHHHHHhcC
Q 011705 189 GTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLG 236 (479)
Q Consensus 189 G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~qv~~~le~l~~~lg 236 (479)
++|++|++|+..+....|.+.+ +++|+.+.+. ..++.|.++.++|
T Consensus 170 ~~c~~c~~~~~~~~~~~c~~~g--~~~~~~~~~g-~~~a~e~lk~l~g 214 (249)
T 1jw9_B 170 EPCYRCLSRLFGENALTCVEAG--VMAPLIGVIG-SLQAMEAIKMLAG 214 (249)
T ss_dssp CCCTHHHHTTCCC-------CC--BCHHHHHHHH-HHHHHHHHHHHHT
T ss_pred CCceEEECCCCCcccccccccC--CcchHHHHHH-HHHHHHHHHHHhC
Confidence 4799999876433222344444 4555444444 3344444444444
No 115
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=25.38 E-value=21 Score=27.97 Aligned_cols=47 Identities=11% Similarity=0.197 Sum_probs=32.8
Q ss_pred hhhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhcc
Q 011705 89 FSSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ 135 (479)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (479)
....+....+.+++-++.+.+.+......|.+.-..+|...|...++
T Consensus 17 ~A~~~~~~~~~i~~~l~~L~~~~~~L~~~W~G~a~~af~~~~~~~~~ 63 (93)
T 4ioe_A 17 IAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQ 63 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHH
Confidence 34455556666677777777777777778888777777777766653
No 116
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=24.91 E-value=57 Score=27.22 Aligned_cols=28 Identities=18% Similarity=0.215 Sum_probs=19.0
Q ss_pred CCcEEEEEeCCCch-HHHHHHHH----HHccCC
Q 011705 353 DRSKVIVMDADGTR-SKGIARSL----RKLGVM 380 (479)
Q Consensus 353 kd~~IVVyC~sG~r-S~~AA~~L----~~~Gf~ 380 (479)
+-.+|++.|.+|.. |..++..+ ...|++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 34579999999985 44455544 566774
No 117
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=24.47 E-value=15 Score=29.40 Aligned_cols=63 Identities=13% Similarity=0.160 Sum_probs=38.4
Q ss_pred hhhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhccccCCcCCCcccccchh
Q 011705 89 FSSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL 151 (479)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 151 (479)
..+.+....+.+++-++.+.+.+......|.+.-..+|...|...++.-..-...+.+.+..|
T Consensus 16 ~A~~~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a~~aF~~~~~~~~~~~~~~~~~L~~i~~~L 78 (98)
T 3gwk_C 16 SAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQL 78 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666667777777777777778777777777777776644333333333333333
No 118
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=23.14 E-value=96 Score=28.19 Aligned_cols=43 Identities=26% Similarity=0.431 Sum_probs=32.8
Q ss_pred hccCCCCcEEEEEeCCCc--hHHHHHHHHHH---ccCCCEEEecccHH
Q 011705 348 LKIVQDRSKVIVMDADGT--RSKGIARSLRK---LGVMRAFLVQGGFQ 390 (479)
Q Consensus 348 Lk~~~kd~~IVVyC~sG~--rS~~AA~~L~~---~Gf~nV~vL~GG~~ 390 (479)
++.++++.-+|++|..|. .|...|..|.. .|..++..+-||-.
T Consensus 64 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~ 111 (167)
T 1to0_A 64 LSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSL 111 (167)
T ss_dssp HTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSS
T ss_pred HhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCC
Confidence 344566666899998887 78889988876 57778988899853
No 119
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=23.01 E-value=64 Score=31.38 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=32.8
Q ss_pred CCCcEEEEEeCCCchHHHHHHHHHHccCCCEEEecccHH
Q 011705 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (479)
Q Consensus 352 ~kd~~IVVyC~sG~rS~~AA~~L~~~Gf~nV~vL~GG~~ 390 (479)
.++.+++|+|++-..+..++..|...|+ ++..+.|++.
T Consensus 274 ~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 274 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 311 (417)
T ss_dssp CTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCCC
Confidence 4677899999998888899999999999 6888999863
No 120
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=21.51 E-value=59 Score=28.81 Aligned_cols=41 Identities=24% Similarity=0.304 Sum_probs=29.5
Q ss_pred CCcEEEEEeCCCc-hHHHHHHHHHHc----cC-CCEEEecccHHHHH
Q 011705 353 DRSKVIVMDADGT-RSKGIARSLRKL----GV-MRAFLVQGGFQSWV 393 (479)
Q Consensus 353 kd~~IVVyC~sG~-rS~~AA~~L~~~----Gf-~nV~vL~GG~~aW~ 393 (479)
+..+|+++|.+.. ||..|-..|+.+ |. .++.+...|...|.
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCc
Confidence 3457999998765 888777666543 55 36778888888773
No 121
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=21.35 E-value=77 Score=27.23 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=18.7
Q ss_pred CCcEEEEEeCCC-chHHHH--HHHHHHccC
Q 011705 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (479)
Q Consensus 353 kd~~IVVyC~sG-~rS~~A--A~~L~~~Gf 379 (479)
.+.+|+|.|..| .||..+ +..++..|.
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 567999999999 487643 344455554
No 122
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=21.11 E-value=54 Score=29.26 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=28.1
Q ss_pred cEEEEEeCCCc-hHHHHHHHHHH----ccCCCEEEecccHHHH
Q 011705 355 SKVIVMDADGT-RSKGIARSLRK----LGVMRAFLVQGGFQSW 392 (479)
Q Consensus 355 ~~IVVyC~sG~-rS~~AA~~L~~----~Gf~nV~vL~GG~~aW 392 (479)
.+|+++|.+.. ||..|-..++. .|..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 47999998765 88877766544 4666677888888777
No 123
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=20.60 E-value=57 Score=28.89 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=27.9
Q ss_pred cEEEEEeCCCc-hHHHHHHHHHHc----cCC-CEEEecccHHHH
Q 011705 355 SKVIVMDADGT-RSKGIARSLRKL----GVM-RAFLVQGGFQSW 392 (479)
Q Consensus 355 ~~IVVyC~sG~-rS~~AA~~L~~~----Gf~-nV~vL~GG~~aW 392 (479)
.+|+++|.+.. ||..|-..|+.. |.. ++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 47999998765 888777666544 553 577888888776
Done!