Query 011706
Match_columns 479
No_of_seqs 290 out of 2605
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 13:40:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i24_A Sulfolipid biosynthesis 100.0 3.4E-52 1.2E-56 421.8 35.9 396 83-478 8-403 (404)
2 3ruf_A WBGU; rossmann fold, UD 100.0 9.4E-46 3.2E-50 367.5 33.9 314 84-453 23-349 (351)
3 4egb_A DTDP-glucose 4,6-dehydr 100.0 2.7E-45 9.3E-50 363.5 33.7 313 83-455 21-340 (346)
4 3m2p_A UDP-N-acetylglucosamine 100.0 1.5E-44 5.1E-49 352.9 34.1 294 86-454 2-298 (311)
5 3ehe_A UDP-glucose 4-epimerase 100.0 5.9E-45 2E-49 356.0 30.7 305 86-459 1-309 (313)
6 3enk_A UDP-glucose 4-epimerase 100.0 9.4E-45 3.2E-49 358.8 32.1 322 85-455 4-339 (341)
7 3ko8_A NAD-dependent epimerase 100.0 2.6E-44 8.8E-49 351.2 30.6 297 87-451 1-308 (312)
8 4id9_A Short-chain dehydrogena 100.0 3.5E-44 1.2E-48 355.6 30.0 304 83-453 16-341 (347)
9 2pk3_A GDP-6-deoxy-D-LYXO-4-he 100.0 1.4E-43 4.6E-48 347.5 33.0 300 84-451 10-320 (321)
10 2hun_A 336AA long hypothetical 100.0 4.4E-43 1.5E-47 346.1 35.3 309 85-454 2-316 (336)
11 1sb8_A WBPP; epimerase, 4-epim 100.0 1.9E-43 6.5E-48 351.1 32.3 319 84-451 25-349 (352)
12 2p5y_A UDP-glucose 4-epimerase 100.0 2.3E-43 7.8E-48 344.4 31.7 300 87-451 1-309 (311)
13 2c20_A UDP-glucose 4-epimerase 100.0 5.9E-43 2E-47 344.3 33.9 316 86-456 1-328 (330)
14 3slg_A PBGP3 protein; structur 100.0 2.4E-44 8.1E-49 360.3 24.3 319 83-452 21-360 (372)
15 4b8w_A GDP-L-fucose synthase; 100.0 2.6E-43 9E-48 344.2 30.3 306 83-454 3-316 (319)
16 1ek6_A UDP-galactose 4-epimera 100.0 1.1E-42 3.6E-47 345.1 33.8 329 86-456 2-344 (348)
17 3sxp_A ADP-L-glycero-D-mannohe 100.0 3.4E-43 1.2E-47 350.6 30.4 315 83-454 7-326 (362)
18 1orr_A CDP-tyvelose-2-epimeras 100.0 8.8E-43 3E-47 345.3 31.4 326 86-454 1-341 (347)
19 1rpn_A GDP-mannose 4,6-dehydra 100.0 2.1E-42 7.2E-47 341.1 33.3 314 85-454 13-333 (335)
20 1udb_A Epimerase, UDP-galactos 100.0 3.6E-42 1.2E-46 339.9 34.1 323 87-456 1-336 (338)
21 1r6d_A TDP-glucose-4,6-dehydra 100.0 6.2E-42 2.1E-46 338.0 35.2 306 87-454 1-316 (337)
22 1rkx_A CDP-glucose-4,6-dehydra 100.0 4.8E-42 1.6E-46 341.6 32.5 313 84-455 7-339 (357)
23 2c5a_A GDP-mannose-3', 5'-epim 100.0 8.7E-42 3E-46 342.6 34.0 308 84-454 27-343 (379)
24 1oc2_A DTDP-glucose 4,6-dehydr 100.0 9.3E-42 3.2E-46 338.2 33.8 305 86-454 4-327 (348)
25 1gy8_A UDP-galactose 4-epimera 100.0 6.8E-42 2.3E-46 345.4 32.2 335 86-455 2-381 (397)
26 2q1s_A Putative nucleotide sug 100.0 3.5E-42 1.2E-46 345.2 28.9 309 84-452 30-357 (377)
27 2bll_A Protein YFBG; decarboxy 100.0 1.3E-41 4.5E-46 336.6 30.9 319 87-455 1-340 (345)
28 1e6u_A GDP-fucose synthetase; 100.0 7.4E-42 2.5E-46 335.1 28.3 299 85-454 2-317 (321)
29 1kew_A RMLB;, DTDP-D-glucose 4 100.0 2.5E-41 8.7E-46 336.8 32.3 309 87-454 1-339 (361)
30 2yy7_A L-threonine dehydrogena 100.0 4.1E-42 1.4E-46 335.5 25.5 304 86-450 2-312 (312)
31 3vps_A TUNA, NAD-dependent epi 100.0 7.6E-42 2.6E-46 334.8 27.1 296 84-452 5-305 (321)
32 1t2a_A GDP-mannose 4,6 dehydra 100.0 7.6E-41 2.6E-45 335.3 34.1 319 87-455 25-369 (375)
33 1db3_A GDP-mannose 4,6-dehydra 100.0 6.1E-41 2.1E-45 335.4 32.1 316 86-455 1-355 (372)
34 2z1m_A GDP-D-mannose dehydrata 100.0 9.8E-41 3.3E-45 330.2 32.5 315 85-454 2-339 (345)
35 2b69_A UDP-glucuronate decarbo 100.0 1.3E-40 4.3E-45 329.6 33.2 307 83-452 24-333 (343)
36 3sc6_A DTDP-4-dehydrorhamnose 100.0 2.3E-41 8E-46 326.3 25.9 276 87-451 6-286 (287)
37 2x6t_A ADP-L-glycero-D-manno-h 100.0 9.3E-41 3.2E-45 332.4 27.8 301 84-450 44-354 (357)
38 1n7h_A GDP-D-mannose-4,6-dehyd 100.0 3.9E-40 1.3E-44 330.8 32.2 317 87-453 29-355 (381)
39 2x4g_A Nucleoside-diphosphate- 100.0 3.1E-40 1E-44 326.5 30.6 291 86-452 13-337 (342)
40 1eq2_A ADP-L-glycero-D-mannohe 100.0 5E-41 1.7E-45 327.4 23.2 298 88-450 1-307 (310)
41 2pzm_A Putative nucleotide sug 100.0 3.2E-40 1.1E-44 324.9 27.9 292 82-453 16-317 (330)
42 3ajr_A NDP-sugar epimerase; L- 100.0 6.8E-40 2.3E-44 320.6 28.9 299 88-452 1-308 (317)
43 3gpi_A NAD-dependent epimerase 100.0 8.9E-41 3.1E-45 322.2 21.2 273 85-451 2-279 (286)
44 2q1w_A Putative nucleotide sug 100.0 1.3E-39 4.4E-44 321.0 28.8 293 83-453 18-319 (333)
45 2ydy_A Methionine adenosyltran 100.0 5.6E-40 1.9E-44 321.0 25.8 291 86-453 2-300 (315)
46 2hrz_A AGR_C_4963P, nucleoside 100.0 9.7E-40 3.3E-44 323.0 27.8 306 83-450 11-337 (342)
47 1z45_A GAL10 bifunctional prot 100.0 5.1E-39 1.7E-43 347.2 31.2 332 83-461 8-360 (699)
48 1vl0_A DTDP-4-dehydrorhamnose 100.0 4.2E-39 1.5E-43 311.3 26.9 275 85-450 11-291 (292)
49 1n2s_A DTDP-4-, DTDP-glucose o 100.0 1.5E-39 5.2E-44 315.4 23.2 280 87-451 1-295 (299)
50 1z7e_A Protein aRNA; rossmann 100.0 2.2E-38 7.4E-43 339.7 29.7 321 84-454 313-654 (660)
51 1y1p_A ARII, aldehyde reductas 100.0 2.2E-38 7.5E-43 312.9 24.6 318 83-449 8-340 (342)
52 2c29_D Dihydroflavonol 4-reduc 100.0 7E-38 2.4E-42 309.1 25.6 312 85-452 4-322 (337)
53 3ius_A Uncharacterized conserv 100.0 1.2E-37 4E-42 300.2 26.0 266 86-447 5-282 (286)
54 2rh8_A Anthocyanidin reductase 100.0 4.5E-38 1.5E-42 310.5 23.1 310 86-451 9-332 (338)
55 2p4h_X Vestitone reductase; NA 100.0 6.6E-37 2.3E-41 299.9 27.2 311 86-451 1-318 (322)
56 2v6g_A Progesterone 5-beta-red 100.0 5.1E-37 1.7E-41 306.0 26.4 296 86-452 1-360 (364)
57 4b4o_A Epimerase family protei 100.0 1.3E-35 4.4E-40 287.8 23.0 279 87-447 1-293 (298)
58 2ggs_A 273AA long hypothetical 100.0 3.7E-35 1.3E-39 280.6 24.4 268 87-442 1-272 (273)
59 3oh8_A Nucleoside-diphosphate 100.0 3E-35 1E-39 306.3 20.1 282 86-449 147-443 (516)
60 4f6c_A AUSA reductase domain p 100.0 4.5E-34 1.5E-38 291.0 23.0 315 84-452 67-413 (427)
61 2gn4_A FLAA1 protein, UDP-GLCN 100.0 1.1E-33 3.8E-38 279.6 24.0 238 82-395 17-260 (344)
62 2jl1_A Triphenylmethane reduct 100.0 9.7E-34 3.3E-38 272.9 19.3 260 87-447 1-286 (287)
63 4dqv_A Probable peptide synthe 100.0 8.1E-33 2.8E-37 285.3 26.2 291 83-406 70-385 (478)
64 3nzo_A UDP-N-acetylglucosamine 100.0 8.2E-33 2.8E-37 278.6 25.3 248 84-403 33-285 (399)
65 2zcu_A Uncharacterized oxidore 100.0 2.2E-33 7.4E-38 270.2 19.6 259 88-449 1-285 (286)
66 4f6l_B AUSA reductase domain p 100.0 2.7E-33 9.3E-38 291.4 19.9 314 85-452 149-494 (508)
67 3dhn_A NAD-dependent epimerase 100.0 3.9E-33 1.4E-37 259.2 18.5 223 86-387 4-227 (227)
68 3st7_A Capsular polysaccharide 100.0 6.2E-33 2.1E-37 277.1 16.6 251 87-445 1-255 (369)
69 3ay3_A NAD-dependent epimerase 100.0 7.1E-32 2.4E-36 257.2 18.9 235 86-447 2-238 (267)
70 3rft_A Uronate dehydrogenase; 100.0 4.3E-31 1.5E-35 251.8 20.5 204 85-380 2-207 (267)
71 3i6i_A Putative leucoanthocyan 100.0 3.3E-31 1.1E-35 262.3 18.7 285 84-454 8-323 (346)
72 3dqp_A Oxidoreductase YLBE; al 100.0 2.8E-31 9.4E-36 245.5 16.5 209 87-391 1-210 (219)
73 3e8x_A Putative NAD-dependent 100.0 2.3E-31 8E-36 248.9 16.1 218 82-393 17-235 (236)
74 3e48_A Putative nucleoside-dip 100.0 3E-29 1E-33 241.7 24.5 222 87-409 1-225 (289)
75 1xq6_A Unknown protein; struct 100.0 2.8E-29 9.7E-34 236.7 15.5 234 85-401 3-252 (253)
76 3ew7_A LMO0794 protein; Q8Y8U8 100.0 9.8E-29 3.4E-33 228.3 17.7 216 87-387 1-220 (221)
77 3h2s_A Putative NADH-flavin re 100.0 8.9E-29 3.1E-33 229.2 16.3 216 87-386 1-221 (224)
78 2wm3_A NMRA-like family domain 100.0 8.6E-29 2.9E-33 239.8 14.9 235 86-409 5-243 (299)
79 1xgk_A Nitrogen metabolite rep 100.0 1.2E-27 4.1E-32 236.9 18.0 235 85-411 4-248 (352)
80 1hdo_A Biliverdin IX beta redu 99.9 2.4E-26 8.2E-31 209.7 23.1 202 86-381 3-204 (206)
81 3m1a_A Putative dehydrogenase; 99.9 2.1E-27 7E-32 228.0 16.7 247 84-395 3-265 (281)
82 1qyd_A Pinoresinol-lariciresin 99.9 2E-27 6.9E-32 231.5 15.7 239 86-409 4-250 (313)
83 2a35_A Hypothetical protein PA 99.9 1.8E-28 6.1E-33 225.6 7.3 199 85-380 4-205 (215)
84 2bgk_A Rhizome secoisolaricire 99.9 1.6E-26 5.5E-31 221.3 21.0 246 83-395 13-276 (278)
85 1fmc_A 7 alpha-hydroxysteroid 99.9 1.6E-26 5.3E-31 218.5 19.6 232 83-385 8-254 (255)
86 4e6p_A Probable sorbitol dehyd 99.9 4.3E-27 1.5E-31 223.1 15.6 233 84-382 6-256 (259)
87 1cyd_A Carbonyl reductase; sho 99.9 2.6E-26 9E-31 215.5 20.4 227 83-381 4-240 (244)
88 3un1_A Probable oxidoreductase 99.9 2.8E-26 9.7E-31 217.4 20.6 216 84-381 26-254 (260)
89 2gas_A Isoflavone reductase; N 99.9 1.3E-26 4.4E-31 225.2 17.9 238 86-409 2-244 (307)
90 3c1o_A Eugenol synthase; pheny 99.9 9.8E-27 3.3E-31 227.6 17.0 234 86-409 4-245 (321)
91 2r6j_A Eugenol synthase 1; phe 99.9 1E-26 3.5E-31 227.2 17.0 230 86-409 11-244 (318)
92 2bka_A CC3, TAT-interacting pr 99.9 3E-26 1E-30 214.8 18.3 207 85-379 17-226 (242)
93 1qyc_A Phenylcoumaran benzylic 99.9 6.9E-27 2.4E-31 227.2 14.3 238 86-409 4-245 (308)
94 3awd_A GOX2181, putative polyo 99.9 2.2E-25 7.4E-30 211.3 22.9 232 83-382 10-257 (260)
95 3osu_A 3-oxoacyl-[acyl-carrier 99.9 1.1E-25 3.8E-30 211.6 20.6 226 85-381 3-243 (246)
96 2dkn_A 3-alpha-hydroxysteroid 99.9 4.3E-27 1.5E-31 222.1 10.9 237 86-386 1-251 (255)
97 3v2h_A D-beta-hydroxybutyrate 99.9 2.2E-25 7.7E-30 213.7 22.5 238 83-381 22-277 (281)
98 3svt_A Short-chain type dehydr 99.9 4.3E-26 1.5E-30 218.8 16.6 248 83-402 8-275 (281)
99 3o38_A Short chain dehydrogena 99.9 5E-25 1.7E-29 209.6 23.9 231 83-381 19-264 (266)
100 3ai3_A NADPH-sorbose reductase 99.9 2.5E-25 8.7E-30 211.3 21.7 240 83-381 4-258 (263)
101 3tpc_A Short chain alcohol deh 99.9 4.8E-25 1.6E-29 208.7 22.6 224 83-381 4-251 (257)
102 2cfc_A 2-(R)-hydroxypropyl-COM 99.9 7.7E-25 2.6E-29 206.3 23.9 228 86-382 2-247 (250)
103 3tzq_B Short-chain type dehydr 99.9 6.3E-25 2.1E-29 209.5 23.5 227 83-381 8-249 (271)
104 1xq1_A Putative tropinone redu 99.9 2E-25 7E-30 212.3 19.8 229 82-381 10-254 (266)
105 3d3w_A L-xylulose reductase; u 99.9 2.9E-25 1E-29 208.4 20.6 225 83-381 4-240 (244)
106 3gaf_A 7-alpha-hydroxysteroid 99.9 1.7E-25 5.7E-30 211.7 19.0 229 83-382 9-251 (256)
107 3ijr_A Oxidoreductase, short c 99.9 3E-25 1E-29 213.8 21.1 232 82-382 43-287 (291)
108 3pk0_A Short-chain dehydrogena 99.9 4.7E-25 1.6E-29 209.3 22.1 229 83-381 7-250 (262)
109 3rih_A Short chain dehydrogena 99.9 4.4E-25 1.5E-29 212.6 22.1 229 83-381 38-281 (293)
110 1w6u_A 2,4-dienoyl-COA reducta 99.9 4.5E-26 1.5E-30 221.0 15.2 245 83-395 23-284 (302)
111 3pgx_A Carveol dehydrogenase; 99.9 5.4E-25 1.9E-29 211.0 22.6 250 83-382 12-277 (280)
112 2rhc_B Actinorhodin polyketide 99.9 2E-25 6.7E-30 213.7 18.5 239 83-382 19-274 (277)
113 2ae2_A Protein (tropinone redu 99.9 2.5E-25 8.5E-30 211.0 18.9 232 83-381 6-253 (260)
114 1spx_A Short-chain reductase f 99.9 3.7E-25 1.3E-29 211.9 20.1 249 84-395 4-276 (278)
115 2wsb_A Galactitol dehydrogenas 99.9 7.1E-25 2.4E-29 207.0 21.7 229 83-382 8-251 (254)
116 2pd6_A Estradiol 17-beta-dehyd 99.9 6.4E-25 2.2E-29 208.6 21.2 232 84-386 5-260 (264)
117 1ja9_A 4HNR, 1,3,6,8-tetrahydr 99.9 1.8E-25 6.3E-30 213.5 16.8 242 82-382 17-273 (274)
118 3s55_A Putative short-chain de 99.9 2.3E-25 8E-30 213.7 17.3 254 83-381 7-275 (281)
119 4dqx_A Probable oxidoreductase 99.9 7.5E-25 2.5E-29 209.5 20.6 232 82-382 23-269 (277)
120 3ak4_A NADH-dependent quinucli 99.9 5.4E-25 1.8E-29 209.1 19.4 235 83-381 9-259 (263)
121 3sx2_A Putative 3-ketoacyl-(ac 99.9 1.2E-24 4.2E-29 208.3 21.8 251 83-382 10-275 (278)
122 2pnf_A 3-oxoacyl-[acyl-carrier 99.9 7E-25 2.4E-29 206.2 19.7 226 84-381 5-246 (248)
123 3gem_A Short chain dehydrogena 99.9 8.5E-25 2.9E-29 207.1 20.4 222 81-381 22-254 (260)
124 3f9i_A 3-oxoacyl-[acyl-carrier 99.9 1.1E-24 3.6E-29 205.3 20.9 226 82-382 10-246 (249)
125 3imf_A Short chain dehydrogena 99.9 2E-24 6.9E-29 204.3 22.8 230 83-381 3-249 (257)
126 2d1y_A Hypothetical protein TT 99.9 1.1E-24 3.7E-29 206.1 20.9 225 84-381 4-244 (256)
127 3i4f_A 3-oxoacyl-[acyl-carrier 99.9 1.2E-24 4.2E-29 206.7 21.1 229 84-381 5-250 (264)
128 1nff_A Putative oxidoreductase 99.9 1.4E-24 4.9E-29 205.7 21.1 218 84-381 5-237 (260)
129 3oid_A Enoyl-[acyl-carrier-pro 99.9 2.5E-24 8.7E-29 203.7 22.7 229 85-381 3-245 (258)
130 2hq1_A Glucose/ribitol dehydro 99.9 4.9E-25 1.7E-29 207.2 17.6 226 84-381 3-244 (247)
131 3vtz_A Glucose 1-dehydrogenase 99.9 3.8E-25 1.3E-29 210.7 16.9 231 82-381 10-252 (269)
132 3afn_B Carbonyl reductase; alp 99.9 5E-25 1.7E-29 208.4 17.6 230 84-383 5-256 (258)
133 1hdc_A 3-alpha, 20 beta-hydrox 99.9 2.3E-24 7.8E-29 203.6 22.1 223 84-381 3-241 (254)
134 2fwm_X 2,3-dihydro-2,3-dihydro 99.9 3.6E-24 1.2E-28 201.8 23.0 226 83-381 4-245 (250)
135 2zat_A Dehydrogenase/reductase 99.9 2.9E-25 1E-29 210.5 15.3 229 83-381 11-255 (260)
136 1mxh_A Pteridine reductase 2; 99.9 2.6E-24 8.9E-29 205.8 22.0 226 84-381 9-270 (276)
137 4dmm_A 3-oxoacyl-[acyl-carrier 99.9 3.3E-24 1.1E-28 204.1 22.5 226 83-382 25-266 (269)
138 3op4_A 3-oxoacyl-[acyl-carrier 99.9 1.9E-24 6.5E-29 203.4 20.4 225 83-382 6-245 (248)
139 3d7l_A LIN1944 protein; APC893 99.9 4.9E-25 1.7E-29 200.7 15.7 191 87-378 4-201 (202)
140 3gvc_A Oxidoreductase, probabl 99.9 9E-25 3.1E-29 208.9 18.0 232 83-382 26-272 (277)
141 3lyl_A 3-oxoacyl-(acyl-carrier 99.9 3.8E-24 1.3E-28 201.2 21.9 228 83-382 2-244 (247)
142 3uf0_A Short-chain dehydrogena 99.9 2.4E-24 8E-29 205.6 20.7 229 83-382 28-270 (273)
143 2q2v_A Beta-D-hydroxybutyrate 99.9 2.6E-24 8.8E-29 203.4 20.8 235 84-381 2-251 (255)
144 1uay_A Type II 3-hydroxyacyl-C 99.9 1.7E-24 5.7E-29 202.8 19.3 214 86-381 2-236 (242)
145 3sju_A Keto reductase; short-c 99.9 1.1E-24 3.9E-29 208.5 18.4 238 84-382 22-276 (279)
146 1ae1_A Tropinone reductase-I; 99.9 6.7E-24 2.3E-28 202.6 23.7 233 83-381 18-266 (273)
147 1x1t_A D(-)-3-hydroxybutyrate 99.9 1.9E-24 6.4E-29 205.0 19.5 240 84-381 2-256 (260)
148 3ucx_A Short chain dehydrogena 99.9 3.1E-24 1E-28 203.9 20.9 238 83-382 8-261 (264)
149 2ew8_A (S)-1-phenylethanol deh 99.9 4.5E-24 1.5E-28 201.0 21.9 225 84-381 5-245 (249)
150 2wyu_A Enoyl-[acyl carrier pro 99.9 3.1E-24 1E-28 203.6 20.7 228 84-381 6-251 (261)
151 3rd5_A Mypaa.01249.C; ssgcid, 99.9 7.9E-24 2.7E-28 204.1 23.9 233 83-380 13-253 (291)
152 1hxh_A 3BETA/17BETA-hydroxyste 99.9 1.7E-24 5.8E-29 204.4 18.8 228 83-382 3-248 (253)
153 3grp_A 3-oxoacyl-(acyl carrier 99.9 5.8E-25 2E-29 209.0 15.7 225 83-382 24-263 (266)
154 3qiv_A Short-chain dehydrogena 99.9 1.6E-24 5.4E-29 204.6 18.4 227 82-382 5-249 (253)
155 1gee_A Glucose 1-dehydrogenase 99.9 7.4E-24 2.5E-28 200.9 23.2 228 84-381 5-249 (261)
156 4e3z_A Putative oxidoreductase 99.9 3.6E-24 1.2E-28 204.4 21.1 229 85-381 25-271 (272)
157 3uxy_A Short-chain dehydrogena 99.9 1.8E-24 6.3E-29 205.6 18.9 223 83-381 25-262 (266)
158 1vl8_A Gluconate 5-dehydrogena 99.9 7E-24 2.4E-28 201.8 22.8 232 82-381 17-263 (267)
159 4egf_A L-xylulose reductase; s 99.9 1.3E-24 4.5E-29 206.7 17.7 231 83-381 17-262 (266)
160 4da9_A Short-chain dehydrogena 99.9 4.5E-24 1.5E-28 204.5 21.4 228 84-381 27-274 (280)
161 1h5q_A NADP-dependent mannitol 99.9 1.8E-24 6.3E-29 205.4 18.5 237 83-382 11-262 (265)
162 2o23_A HADH2 protein; HSD17B10 99.9 3.5E-24 1.2E-28 203.6 20.4 225 83-381 9-258 (265)
163 4iin_A 3-ketoacyl-acyl carrier 99.9 4.1E-24 1.4E-28 203.9 20.8 229 82-381 25-268 (271)
164 2z1n_A Dehydrogenase; reductas 99.9 6.5E-24 2.2E-28 201.3 21.9 239 83-381 4-257 (260)
165 4fc7_A Peroxisomal 2,4-dienoyl 99.9 2.5E-24 8.5E-29 206.0 19.2 231 83-381 24-269 (277)
166 2c07_A 3-oxoacyl-(acyl-carrier 99.9 7.2E-24 2.5E-28 203.7 22.4 228 82-381 40-282 (285)
167 3n74_A 3-ketoacyl-(acyl-carrie 99.9 3.1E-24 1.1E-28 203.6 19.6 230 82-381 5-253 (261)
168 2ag5_A DHRS6, dehydrogenase/re 99.9 6.7E-24 2.3E-28 199.4 21.6 228 84-381 4-242 (246)
169 3r3s_A Oxidoreductase; structu 99.9 3E-24 1E-28 207.2 19.7 233 82-381 45-290 (294)
170 3ftp_A 3-oxoacyl-[acyl-carrier 99.9 1.1E-24 3.7E-29 207.6 16.3 228 83-382 25-267 (270)
171 2ph3_A 3-oxoacyl-[acyl carrier 99.9 2.1E-24 7E-29 202.6 17.8 224 86-382 1-242 (245)
172 1iy8_A Levodione reductase; ox 99.9 9.2E-24 3.1E-28 201.0 22.1 236 83-381 10-262 (267)
173 2dtx_A Glucose 1-dehydrogenase 99.9 2.5E-24 8.7E-29 204.4 18.0 226 84-381 6-245 (264)
174 4eso_A Putative oxidoreductase 99.9 6.6E-24 2.3E-28 200.5 20.5 230 83-381 5-246 (255)
175 3r1i_A Short-chain type dehydr 99.9 1.1E-23 3.8E-28 201.3 22.2 230 83-382 29-273 (276)
176 3t4x_A Oxidoreductase, short c 99.9 3.2E-24 1.1E-28 204.1 18.4 243 83-381 7-261 (267)
177 2yut_A Putative short-chain ox 99.9 4.9E-25 1.7E-29 201.4 12.0 196 87-369 1-201 (207)
178 1qsg_A Enoyl-[acyl-carrier-pro 99.9 5.1E-24 1.7E-28 202.6 19.4 228 84-381 7-253 (265)
179 1edo_A Beta-keto acyl carrier 99.9 4.6E-24 1.6E-28 200.1 19.0 223 86-381 1-241 (244)
180 2p91_A Enoyl-[acyl-carrier-pro 99.9 1.4E-23 4.8E-28 201.7 22.7 228 84-381 19-265 (285)
181 2b4q_A Rhamnolipids biosynthes 99.9 2.1E-23 7E-28 199.4 23.5 226 83-381 26-273 (276)
182 3edm_A Short chain dehydrogena 99.9 6.8E-24 2.3E-28 200.9 20.0 234 83-384 5-250 (259)
183 3rwb_A TPLDH, pyridoxal 4-dehy 99.9 1.9E-24 6.6E-29 203.2 16.0 227 83-382 3-244 (247)
184 1zk4_A R-specific alcohol dehy 99.9 3.5E-24 1.2E-28 201.9 17.7 227 84-381 4-247 (251)
185 3u5t_A 3-oxoacyl-[acyl-carrier 99.9 7.1E-24 2.4E-28 201.6 19.7 232 83-381 24-265 (267)
186 3v2g_A 3-oxoacyl-[acyl-carrier 99.9 4E-23 1.4E-27 196.8 24.9 228 83-381 28-268 (271)
187 1yxm_A Pecra, peroxisomal tran 99.9 1.1E-23 3.7E-28 204.3 21.3 232 83-382 15-265 (303)
188 3tox_A Short chain dehydrogena 99.9 1.1E-23 3.9E-28 201.6 20.9 231 84-381 6-252 (280)
189 3f1l_A Uncharacterized oxidore 99.9 1.7E-23 5.7E-28 197.5 21.7 226 83-385 9-250 (252)
190 3pxx_A Carveol dehydrogenase; 99.9 8.9E-24 3E-28 203.2 20.2 264 83-381 7-282 (287)
191 4ibo_A Gluconate dehydrogenase 99.9 5.9E-24 2E-28 202.6 18.6 230 83-382 23-267 (271)
192 3tsc_A Putative oxidoreductase 99.9 2E-23 6.8E-28 199.8 22.3 253 83-382 8-274 (277)
193 3u9l_A 3-oxoacyl-[acyl-carrier 99.9 9.4E-24 3.2E-28 206.2 20.4 182 84-301 3-197 (324)
194 3v8b_A Putative dehydrogenase, 99.9 1.2E-23 4E-28 201.8 20.7 236 83-381 25-278 (283)
195 3tjr_A Short chain dehydrogena 99.9 1.1E-23 3.8E-28 203.9 20.8 225 84-367 29-266 (301)
196 3a28_C L-2.3-butanediol dehydr 99.9 1.4E-23 4.9E-28 198.6 21.0 237 86-381 2-254 (258)
197 3h7a_A Short chain dehydrogena 99.9 1.7E-23 5.7E-28 197.4 21.3 216 83-369 4-232 (252)
198 1uls_A Putative 3-oxoacyl-acyl 99.9 4.1E-23 1.4E-27 193.9 23.7 220 84-381 3-237 (245)
199 3gk3_A Acetoacetyl-COA reducta 99.9 1.2E-23 4.2E-28 200.3 20.5 231 83-381 22-265 (269)
200 3lf2_A Short chain oxidoreduct 99.9 2.3E-23 7.8E-28 198.0 22.2 242 83-381 5-260 (265)
201 2uvd_A 3-oxoacyl-(acyl-carrier 99.9 1.4E-23 4.6E-28 197.3 20.3 227 84-381 2-243 (246)
202 3qvo_A NMRA family protein; st 99.9 3.1E-23 1.1E-27 193.6 22.5 202 83-381 20-224 (236)
203 2a4k_A 3-oxoacyl-[acyl carrier 99.9 1E-23 3.4E-28 200.1 19.3 223 84-381 4-238 (263)
204 3k31_A Enoyl-(acyl-carrier-pro 99.9 4.8E-23 1.7E-27 198.9 24.4 231 81-381 25-273 (296)
205 3p19_A BFPVVD8, putative blue 99.9 2.3E-23 7.7E-28 198.0 21.7 212 84-369 14-238 (266)
206 1geg_A Acetoin reductase; SDR 99.9 1.4E-23 4.9E-28 198.4 20.2 235 86-381 2-252 (256)
207 3dii_A Short-chain dehydrogena 99.9 3.4E-23 1.2E-27 194.7 22.5 216 86-381 2-228 (247)
208 3uve_A Carveol dehydrogenase ( 99.9 9.3E-23 3.2E-27 196.1 25.9 259 83-381 8-282 (286)
209 3cxt_A Dehydrogenase with diff 99.9 1.6E-23 5.5E-28 201.6 20.6 233 83-381 31-280 (291)
210 4iiu_A 3-oxoacyl-[acyl-carrier 99.9 2.7E-23 9.4E-28 197.7 21.6 228 83-382 23-266 (267)
211 4b79_A PA4098, probable short- 99.9 4.6E-23 1.6E-27 190.6 22.3 224 84-382 9-239 (242)
212 3ezl_A Acetoacetyl-COA reducta 99.9 7.6E-24 2.6E-28 200.2 17.5 229 83-382 10-253 (256)
213 3oec_A Carveol dehydrogenase ( 99.9 3.2E-23 1.1E-27 202.1 22.4 255 83-382 43-313 (317)
214 3ksu_A 3-oxoacyl-acyl carrier 99.9 5.4E-24 1.9E-28 201.9 16.4 234 83-383 8-252 (262)
215 1o5i_A 3-oxoacyl-(acyl carrier 99.9 2.6E-23 8.9E-28 195.7 20.7 219 81-382 14-244 (249)
216 3tl3_A Short-chain type dehydr 99.9 9.2E-24 3.1E-28 199.8 17.5 224 82-381 5-251 (257)
217 1uzm_A 3-oxoacyl-[acyl-carrier 99.9 8.4E-24 2.9E-28 198.9 17.1 216 83-381 12-242 (247)
218 1g0o_A Trihydroxynaphthalene r 99.9 1.8E-23 6.3E-28 200.7 19.7 240 83-381 26-280 (283)
219 1yo6_A Putative carbonyl reduc 99.9 2.2E-23 7.6E-28 196.0 19.5 216 85-383 2-248 (250)
220 3oig_A Enoyl-[acyl-carrier-pro 99.9 8.3E-23 2.9E-27 194.2 23.5 230 83-381 4-252 (266)
221 1xkq_A Short-chain reductase f 99.9 4E-23 1.4E-27 198.0 21.0 235 84-381 4-261 (280)
222 3ek2_A Enoyl-(acyl-carrier-pro 99.9 2E-23 7E-28 198.9 18.9 240 82-389 10-267 (271)
223 3t7c_A Carveol dehydrogenase; 99.9 5.8E-23 2E-27 198.7 22.2 255 83-381 25-295 (299)
224 2bd0_A Sepiapterin reductase; 99.9 5.8E-23 2E-27 192.7 21.4 205 86-369 2-226 (244)
225 4dyv_A Short-chain dehydrogena 99.9 3.2E-23 1.1E-27 197.6 19.8 215 84-371 26-255 (272)
226 3qlj_A Short chain dehydrogena 99.9 4E-24 1.4E-28 209.1 13.7 248 83-395 24-309 (322)
227 2pd4_A Enoyl-[acyl-carrier-pro 99.9 6.5E-23 2.2E-27 196.0 21.7 228 84-381 4-249 (275)
228 4e4y_A Short chain dehydrogena 99.9 1.5E-23 5.1E-28 196.8 16.8 227 85-381 3-240 (244)
229 3is3_A 17BETA-hydroxysteroid d 99.9 1.5E-23 5.1E-28 199.9 16.8 242 83-381 15-268 (270)
230 2nm0_A Probable 3-oxacyl-(acyl 99.9 2.6E-23 9E-28 196.1 18.3 216 83-381 18-248 (253)
231 3grk_A Enoyl-(acyl-carrier-pro 99.9 1.1E-22 3.9E-27 196.0 22.9 229 83-381 28-274 (293)
232 3r6d_A NAD-dependent epimerase 99.9 6E-23 2.1E-27 189.6 20.0 200 86-380 5-210 (221)
233 3tfo_A Putative 3-oxoacyl-(acy 99.9 7.3E-23 2.5E-27 194.1 20.8 216 84-370 2-228 (264)
234 2ekp_A 2-deoxy-D-gluconate 3-d 99.9 6.3E-23 2.1E-27 191.9 20.1 219 86-381 2-235 (239)
235 2ehd_A Oxidoreductase, oxidore 99.9 8.1E-23 2.8E-27 190.5 20.7 200 85-369 4-216 (234)
236 1xhl_A Short-chain dehydrogena 99.9 2.6E-23 8.8E-28 200.9 17.6 248 84-394 24-293 (297)
237 4imr_A 3-oxoacyl-(acyl-carrier 99.9 1.9E-23 6.3E-28 199.6 16.3 231 83-381 30-274 (275)
238 3ctm_A Carbonyl reductase; alc 99.9 5.3E-23 1.8E-27 197.0 19.5 229 83-382 31-276 (279)
239 4fn4_A Short chain dehydrogena 99.9 1.6E-22 5.6E-27 189.0 22.0 233 83-381 4-250 (254)
240 3nyw_A Putative oxidoreductase 99.9 7.2E-23 2.5E-27 192.8 19.7 210 83-369 4-227 (250)
241 3ioy_A Short-chain dehydrogena 99.9 6.5E-23 2.2E-27 200.0 19.5 179 84-302 6-203 (319)
242 3uce_A Dehydrogenase; rossmann 99.9 6.8E-23 2.3E-27 189.6 18.6 211 84-381 4-219 (223)
243 1sby_A Alcohol dehydrogenase; 99.9 1.6E-22 5.4E-27 191.0 21.5 220 84-381 3-239 (254)
244 2x9g_A PTR1, pteridine reducta 99.9 1.7E-22 5.8E-27 194.4 22.0 226 83-381 20-282 (288)
245 4dry_A 3-oxoacyl-[acyl-carrier 99.9 6.3E-23 2.2E-27 196.5 18.8 219 83-370 30-263 (281)
246 3rkr_A Short chain oxidoreduct 99.9 1.9E-22 6.6E-27 191.3 21.8 209 83-369 26-248 (262)
247 3rku_A Oxidoreductase YMR226C; 99.9 1.1E-22 3.7E-27 195.4 20.3 229 84-381 31-277 (287)
248 1yde_A Retinal dehydrogenase/r 99.9 7.2E-23 2.5E-27 195.1 18.8 232 84-386 7-254 (270)
249 3orf_A Dihydropteridine reduct 99.9 8.6E-23 2.9E-27 192.4 19.0 206 84-380 20-241 (251)
250 3l77_A Short-chain alcohol deh 99.9 3.7E-22 1.2E-26 186.2 22.9 218 85-380 1-229 (235)
251 4hp8_A 2-deoxy-D-gluconate 3-d 99.9 3.6E-23 1.2E-27 191.7 15.4 230 83-381 6-243 (247)
252 3ppi_A 3-hydroxyacyl-COA dehyd 99.9 1.2E-22 4.2E-27 194.7 19.4 226 83-381 27-275 (281)
253 1yb1_A 17-beta-hydroxysteroid 99.9 9E-23 3.1E-27 194.7 18.1 206 83-368 28-249 (272)
254 2gdz_A NAD+-dependent 15-hydro 99.9 1.5E-23 5.2E-28 199.5 12.7 234 84-387 5-257 (267)
255 1zem_A Xylitol dehydrogenase; 99.9 4.1E-22 1.4E-26 189.0 22.5 175 84-300 5-193 (262)
256 4g81_D Putative hexonate dehyd 99.9 2.9E-23 1E-27 194.2 14.3 233 83-382 6-251 (255)
257 3ged_A Short-chain dehydrogena 99.9 4.4E-22 1.5E-26 185.3 22.0 216 86-381 2-228 (247)
258 3asu_A Short-chain dehydrogena 99.9 4.3E-22 1.5E-26 187.2 22.1 219 87-380 1-235 (248)
259 2qhx_A Pteridine reductase 1; 99.9 3.2E-22 1.1E-26 195.9 22.0 225 84-381 44-322 (328)
260 1xg5_A ARPG836; short chain de 99.9 1.3E-22 4.4E-27 194.3 18.8 220 84-369 30-266 (279)
261 3gdg_A Probable NADP-dependent 99.9 5.4E-23 1.9E-27 195.6 15.9 233 83-381 17-263 (267)
262 3nrc_A Enoyl-[acyl-carrier-pro 99.9 4.1E-22 1.4E-26 190.9 22.2 227 83-381 23-270 (280)
263 3l6e_A Oxidoreductase, short-c 99.9 1.3E-22 4.5E-27 189.2 18.0 203 85-369 2-216 (235)
264 3sc4_A Short chain dehydrogena 99.9 7E-22 2.4E-26 189.7 23.6 228 82-379 5-246 (285)
265 2jah_A Clavulanic acid dehydro 99.9 8.6E-22 2.9E-26 185.1 23.1 215 84-368 5-232 (247)
266 1ooe_A Dihydropteridine reduct 99.9 1.1E-22 3.7E-27 189.9 16.6 207 85-380 2-226 (236)
267 1sny_A Sniffer CG10964-PA; alp 99.9 4.7E-22 1.6E-26 189.1 20.9 216 83-383 18-265 (267)
268 1xu9_A Corticosteroid 11-beta- 99.9 4.6E-22 1.6E-26 191.2 20.6 207 84-367 26-246 (286)
269 3icc_A Putative 3-oxoacyl-(acy 99.9 6E-22 2E-26 187.0 20.9 230 83-381 4-252 (255)
270 3kzv_A Uncharacterized oxidore 99.9 5.7E-22 1.9E-26 187.1 20.6 229 86-381 2-247 (254)
271 4gkb_A 3-oxoacyl-[acyl-carrier 99.9 4.9E-22 1.7E-26 186.6 19.7 234 83-381 4-249 (258)
272 3zv4_A CIS-2,3-dihydrobiphenyl 99.9 2.8E-22 9.5E-27 192.1 17.7 232 83-381 2-254 (281)
273 4fgs_A Probable dehydrogenase 99.9 6.1E-22 2.1E-26 186.9 19.6 234 83-381 26-269 (273)
274 1fjh_A 3alpha-hydroxysteroid d 99.9 1.4E-22 4.7E-27 191.7 15.0 232 86-381 1-247 (257)
275 3i1j_A Oxidoreductase, short c 99.9 7.1E-22 2.4E-26 185.6 19.3 217 83-378 11-246 (247)
276 3guy_A Short-chain dehydrogena 99.9 5.7E-22 2E-26 184.3 18.5 203 86-368 1-211 (230)
277 3kvo_A Hydroxysteroid dehydrog 99.9 3.1E-21 1.1E-25 189.8 24.4 217 82-366 41-269 (346)
278 1dhr_A Dihydropteridine reduct 99.9 5.2E-22 1.8E-26 185.9 18.0 210 84-380 5-229 (241)
279 3e03_A Short chain dehydrogena 99.9 1.2E-21 3.9E-26 187.1 20.3 226 83-377 3-241 (274)
280 1wma_A Carbonyl reductase [NAD 99.9 1.2E-21 4E-26 186.9 20.3 223 85-367 3-257 (276)
281 1e7w_A Pteridine reductase; di 99.9 2.1E-21 7E-26 187.0 21.4 225 84-381 7-285 (291)
282 2nwq_A Probable short-chain de 99.9 1.8E-21 6.3E-26 185.4 20.3 173 87-301 22-208 (272)
283 4fs3_A Enoyl-[acyl-carrier-pro 99.9 6.7E-21 2.3E-25 179.8 23.4 231 83-381 3-251 (256)
284 4h15_A Short chain alcohol deh 99.9 3.9E-21 1.3E-25 181.1 21.4 234 83-382 8-257 (261)
285 2h7i_A Enoyl-[acyl-carrier-pro 99.9 1.6E-21 5.3E-26 185.8 18.8 239 84-381 5-263 (269)
286 3e9n_A Putative short-chain de 99.9 6.7E-22 2.3E-26 185.6 14.9 212 84-379 3-226 (245)
287 1zmt_A Haloalcohol dehalogenas 99.9 2.1E-21 7E-26 183.3 18.3 229 86-381 1-242 (254)
288 2qq5_A DHRS1, dehydrogenase/re 99.9 5.2E-21 1.8E-25 181.2 21.0 175 84-301 3-198 (260)
289 1oaa_A Sepiapterin reductase; 99.9 8.1E-22 2.8E-26 186.7 15.2 178 83-300 3-203 (259)
290 3u0b_A Oxidoreductase, short c 99.9 6.6E-21 2.2E-25 194.0 18.7 226 82-381 209-449 (454)
291 3o26_A Salutaridine reductase; 99.9 1.9E-20 6.6E-25 181.8 19.1 200 83-300 9-270 (311)
292 1jtv_A 17 beta-hydroxysteroid 99.8 1.6E-20 5.6E-25 183.6 16.9 178 86-301 2-192 (327)
293 1d7o_A Enoyl-[acyl-carrier pro 99.8 1.9E-19 6.5E-24 173.8 21.2 240 83-381 5-284 (297)
294 1gz6_A Estradiol 17 beta-dehyd 99.8 4.7E-20 1.6E-24 179.6 16.3 223 83-382 6-243 (319)
295 1zmo_A Halohydrin dehalogenase 99.8 1.5E-20 5.1E-25 176.3 12.2 219 86-381 1-241 (244)
296 2fr1_A Erythromycin synthase, 99.8 1.4E-19 4.8E-24 185.8 19.3 230 84-393 224-460 (486)
297 2z5l_A Tylkr1, tylactone synth 99.8 5.4E-19 1.8E-23 182.2 20.6 230 85-394 258-491 (511)
298 3mje_A AMPHB; rossmann fold, o 99.8 3E-18 1E-22 175.4 17.3 176 85-301 238-421 (496)
299 3oml_A GH14720P, peroxisomal m 99.8 1.5E-18 5.3E-23 183.3 12.5 223 82-381 15-252 (613)
300 2o2s_A Enoyl-acyl carrier redu 99.8 1.1E-17 3.8E-22 162.8 17.2 246 83-381 6-291 (315)
301 2ptg_A Enoyl-acyl carrier redu 99.8 8E-18 2.7E-22 164.1 15.6 251 83-381 6-304 (319)
302 1y7t_A Malate dehydrogenase; N 99.7 2.5E-18 8.4E-23 168.1 10.4 176 86-302 4-188 (327)
303 3lt0_A Enoyl-ACP reductase; tr 99.7 4E-17 1.4E-21 159.8 17.1 183 86-300 2-223 (329)
304 3qp9_A Type I polyketide synth 99.7 1.6E-17 5.4E-22 172.0 13.1 241 84-394 249-502 (525)
305 2et6_A (3R)-hydroxyacyl-COA de 99.7 2.3E-16 7.8E-21 166.0 19.6 168 83-295 319-498 (604)
306 3zu3_A Putative reductase YPO4 99.7 1.4E-15 4.8E-20 149.0 17.1 188 85-300 46-283 (405)
307 2et6_A (3R)-hydroxyacyl-COA de 99.6 1.2E-15 4E-20 160.6 15.2 176 83-295 5-194 (604)
308 2uv9_A Fatty acid synthase alp 99.6 7.7E-15 2.6E-19 166.5 20.1 236 83-392 649-918 (1878)
309 3s8m_A Enoyl-ACP reductase; ro 99.6 2.9E-15 9.8E-20 148.2 14.1 190 85-301 60-298 (422)
310 3slk_A Polyketide synthase ext 99.6 6.2E-15 2.1E-19 159.7 14.8 175 84-301 528-710 (795)
311 4eue_A Putative reductase CA_C 99.6 2.4E-14 8.1E-19 142.8 17.3 189 84-300 58-297 (418)
312 2uv8_A Fatty acid synthase sub 99.6 1.3E-14 4.5E-19 165.0 17.1 176 83-299 672-874 (1887)
313 2pff_A Fatty acid synthase sub 99.6 2.8E-15 9.4E-20 165.0 10.0 178 82-300 472-676 (1688)
314 2vz8_A Fatty acid synthase; tr 99.4 2E-12 6.7E-17 154.8 16.1 177 84-301 1882-2067(2512)
315 3zen_D Fatty acid synthase; tr 99.3 5.9E-11 2E-15 141.9 17.6 245 83-394 2133-2414(3089)
316 3ic5_A Putative saccharopine d 99.1 4.1E-10 1.4E-14 92.0 10.4 95 85-227 4-99 (118)
317 1b8p_A Protein (malate dehydro 99.1 1.9E-10 6.4E-15 112.0 9.4 170 86-300 5-189 (329)
318 1lu9_A Methylene tetrahydromet 98.9 2.1E-10 7.1E-15 109.6 1.7 114 83-216 116-237 (287)
319 1smk_A Malate dehydrogenase, g 98.9 1.2E-08 4E-13 99.0 11.6 116 85-230 7-125 (326)
320 4ggo_A Trans-2-enoyl-COA reduc 98.8 3.5E-08 1.2E-12 95.8 13.2 96 85-186 49-151 (401)
321 1hye_A L-lactate/malate dehydr 98.8 8.8E-09 3E-13 99.4 9.0 171 87-299 1-176 (313)
322 2hmt_A YUAA protein; RCK, KTN, 98.7 9.3E-08 3.2E-12 80.7 10.7 101 85-231 5-106 (144)
323 1o6z_A MDH, malate dehydrogena 98.7 1.2E-08 4E-13 98.0 4.7 115 87-230 1-119 (303)
324 3llv_A Exopolyphosphatase-rela 98.6 3.8E-07 1.3E-11 76.9 10.5 75 85-184 5-79 (141)
325 4ina_A Saccharopine dehydrogen 98.5 4.5E-07 1.5E-11 90.7 12.5 83 86-185 1-86 (405)
326 1ff9_A Saccharopine reductase; 98.5 2.2E-07 7.6E-12 94.0 9.1 114 85-222 2-118 (450)
327 1u7z_A Coenzyme A biosynthesis 98.4 8E-07 2.7E-11 80.5 9.2 76 84-187 6-99 (226)
328 1lss_A TRK system potassium up 98.4 1.9E-06 6.5E-11 72.1 11.0 98 86-229 4-102 (140)
329 1id1_A Putative potassium chan 98.4 2.5E-06 8.5E-11 73.0 11.8 77 86-184 3-80 (153)
330 2gk4_A Conserved hypothetical 98.3 1.1E-06 3.8E-11 79.7 8.7 78 85-188 2-97 (232)
331 2g1u_A Hypothetical protein TM 98.3 8E-06 2.7E-10 69.9 13.8 76 84-184 17-93 (155)
332 2axq_A Saccharopine dehydrogen 98.3 8.6E-07 2.9E-11 89.9 7.9 114 83-221 20-137 (467)
333 1mld_A Malate dehydrogenase; o 98.3 4.7E-06 1.6E-10 80.1 12.6 115 87-230 1-118 (314)
334 5mdh_A Malate dehydrogenase; o 98.3 1.1E-06 3.8E-11 85.0 6.8 120 86-230 3-130 (333)
335 3abi_A Putative uncharacterize 98.2 5.1E-06 1.7E-10 81.9 11.4 96 83-229 13-108 (365)
336 3c85_A Putative glutathione-re 98.1 1E-05 3.5E-10 71.3 9.4 74 85-184 38-114 (183)
337 3fwz_A Inner membrane protein 98.0 3.4E-05 1.2E-09 64.7 10.0 73 86-184 7-80 (140)
338 3fi9_A Malate dehydrogenase; s 98.0 2.2E-05 7.5E-10 76.0 9.5 118 83-230 5-127 (343)
339 3l4b_C TRKA K+ channel protien 97.8 9.2E-05 3.2E-09 67.1 10.7 73 87-184 1-74 (218)
340 1pqw_A Polyketide synthase; ro 97.8 2E-05 6.9E-10 70.3 6.1 76 85-184 38-116 (198)
341 2aef_A Calcium-gated potassium 97.8 6.8E-05 2.3E-09 68.8 8.7 71 86-184 9-80 (234)
342 2hcy_A Alcohol dehydrogenase 1 97.7 3.1E-05 1E-09 75.7 5.0 37 84-120 168-204 (347)
343 2z2v_A Hypothetical protein PH 97.7 0.00021 7.3E-09 70.0 10.8 71 85-183 15-85 (365)
344 3pqe_A L-LDH, L-lactate dehydr 97.6 0.00034 1.2E-08 67.2 11.9 118 85-230 4-123 (326)
345 2eez_A Alanine dehydrogenase; 97.6 0.00012 4E-09 72.1 8.3 76 84-185 164-239 (369)
346 3vku_A L-LDH, L-lactate dehydr 97.6 0.00032 1.1E-08 67.4 10.2 117 85-230 8-126 (326)
347 3l9w_A Glutathione-regulated p 97.6 0.00021 7.2E-09 71.2 9.3 73 86-184 4-77 (413)
348 1jw9_B Molybdopterin biosynthe 97.5 0.00045 1.5E-08 63.9 10.7 124 84-235 29-159 (249)
349 1v3u_A Leukotriene B4 12- hydr 97.5 0.00017 5.8E-09 69.9 7.4 37 84-120 144-180 (333)
350 1wly_A CAAR, 2-haloacrylate re 97.5 0.00011 3.7E-09 71.3 6.0 37 84-120 144-180 (333)
351 2zb4_A Prostaglandin reductase 97.4 0.0002 6.7E-09 70.2 7.2 36 85-120 158-196 (357)
352 3tnl_A Shikimate dehydrogenase 97.4 0.00071 2.4E-08 64.6 9.9 84 83-184 151-235 (315)
353 4aj2_A L-lactate dehydrogenase 97.4 0.0015 5.1E-08 62.8 12.1 117 84-230 17-137 (331)
354 3gvi_A Malate dehydrogenase; N 97.2 0.0018 6.3E-08 62.0 11.4 119 84-230 5-125 (324)
355 3tl2_A Malate dehydrogenase; c 97.2 0.0019 6.4E-08 61.7 11.3 121 83-230 5-128 (315)
356 3p7m_A Malate dehydrogenase; p 97.2 0.0019 6.6E-08 61.9 11.4 115 85-229 4-122 (321)
357 1qor_A Quinone oxidoreductase; 97.2 0.00034 1.2E-08 67.5 6.2 76 85-184 140-218 (327)
358 3qwb_A Probable quinone oxidor 97.2 0.00046 1.6E-08 66.8 7.1 37 84-120 147-183 (334)
359 1yb5_A Quinone oxidoreductase; 97.2 0.0006 2.1E-08 66.5 8.0 37 84-120 169-205 (351)
360 3h8v_A Ubiquitin-like modifier 97.2 0.0026 8.9E-08 59.9 12.0 125 83-231 33-171 (292)
361 1jay_A Coenzyme F420H2:NADP+ o 97.2 0.00014 4.8E-09 65.5 3.1 34 87-120 1-34 (212)
362 2o7s_A DHQ-SDH PR, bifunctiona 97.2 0.00021 7.2E-09 73.7 4.4 108 84-220 362-476 (523)
363 3ldh_A Lactate dehydrogenase; 97.2 0.0057 1.9E-07 58.6 13.8 117 85-230 20-139 (330)
364 1zud_1 Adenylyltransferase THI 97.2 0.004 1.4E-07 57.5 12.4 125 84-235 26-156 (251)
365 3hhp_A Malate dehydrogenase; M 97.1 0.0025 8.4E-08 60.8 11.1 116 87-230 1-119 (312)
366 2j3h_A NADP-dependent oxidored 97.1 0.00049 1.7E-08 66.9 6.3 37 84-120 154-190 (345)
367 4b7c_A Probable oxidoreductase 97.1 0.00076 2.6E-08 65.3 7.1 37 84-120 148-184 (336)
368 2j8z_A Quinone oxidoreductase; 97.1 0.00066 2.2E-08 66.3 6.7 37 84-120 161-197 (354)
369 1nyt_A Shikimate 5-dehydrogena 97.1 0.00084 2.9E-08 62.9 7.1 37 83-120 116-152 (271)
370 4h7p_A Malate dehydrogenase; s 97.1 0.0048 1.6E-07 59.6 12.5 175 85-302 23-209 (345)
371 2x0j_A Malate dehydrogenase; o 97.1 0.0034 1.2E-07 59.2 11.2 114 87-230 1-119 (294)
372 1oju_A MDH, malate dehydrogena 97.1 0.00095 3.3E-08 63.1 7.3 117 87-230 1-119 (294)
373 1ur5_A Malate dehydrogenase; o 97.1 0.0035 1.2E-07 59.8 11.3 112 87-230 3-119 (309)
374 1pzg_A LDH, lactate dehydrogen 97.0 0.011 3.8E-07 56.9 14.5 123 85-228 8-131 (331)
375 2c0c_A Zinc binding alcohol de 97.0 0.0015 5.3E-08 63.9 8.6 37 84-120 162-198 (362)
376 1lnq_A MTHK channels, potassiu 97.0 0.001 3.6E-08 64.4 7.3 70 86-183 115-185 (336)
377 1y6j_A L-lactate dehydrogenase 97.0 0.0033 1.1E-07 60.3 10.4 113 86-229 7-123 (318)
378 2eih_A Alcohol dehydrogenase; 97.0 0.0012 4.1E-08 64.1 7.2 36 85-120 166-201 (343)
379 3gxh_A Putative phosphatase (D 97.0 0.00093 3.2E-08 57.0 5.7 76 96-185 26-107 (157)
380 1p9o_A Phosphopantothenoylcyst 96.9 0.0019 6.6E-08 61.2 8.1 35 85-119 35-88 (313)
381 3nep_X Malate dehydrogenase; h 96.9 0.0035 1.2E-07 59.8 10.0 114 87-230 1-119 (314)
382 1dih_A Dihydrodipicolinate red 96.9 0.00067 2.3E-08 63.6 4.4 34 85-118 4-39 (273)
383 2egg_A AROE, shikimate 5-dehyd 96.9 0.0019 6.5E-08 61.3 7.6 77 83-186 138-215 (297)
384 1y8q_A Ubiquitin-like 1 activa 96.9 0.0078 2.7E-07 58.3 11.9 126 84-237 34-165 (346)
385 3d0o_A L-LDH 1, L-lactate dehy 96.8 0.0083 2.8E-07 57.4 11.6 117 85-229 5-123 (317)
386 1nvt_A Shikimate 5'-dehydrogen 96.8 0.00042 1.4E-08 65.6 2.5 36 83-120 125-160 (287)
387 3oj0_A Glutr, glutamyl-tRNA re 96.8 0.00064 2.2E-08 57.0 3.3 34 86-120 21-54 (144)
388 4eye_A Probable oxidoreductase 96.8 0.0016 5.4E-08 63.3 6.6 37 84-120 158-194 (342)
389 1y8q_B Anthracycline-, ubiquit 96.8 0.01 3.4E-07 61.8 12.8 126 85-236 16-147 (640)
390 3pi7_A NADH oxidoreductase; gr 96.8 0.0028 9.6E-08 61.6 8.4 35 86-120 165-199 (349)
391 1ez4_A Lactate dehydrogenase; 96.8 0.0081 2.8E-07 57.5 11.3 115 86-229 5-121 (318)
392 1rjw_A ADH-HT, alcohol dehydro 96.8 0.0024 8.3E-08 61.8 7.8 35 85-120 164-198 (339)
393 2v6b_A L-LDH, L-lactate dehydr 96.8 0.0093 3.2E-07 56.7 11.6 112 87-229 1-116 (304)
394 3h5n_A MCCB protein; ubiquitin 96.8 0.0088 3E-07 58.1 11.6 121 84-231 116-243 (353)
395 1pjc_A Protein (L-alanine dehy 96.8 0.0025 8.5E-08 62.4 7.7 76 84-185 165-240 (361)
396 3jyn_A Quinone oxidoreductase; 96.8 0.0015 5E-08 63.0 5.9 37 84-120 139-175 (325)
397 2zqz_A L-LDH, L-lactate dehydr 96.7 0.0082 2.8E-07 57.6 11.0 114 85-229 8-125 (326)
398 1yqd_A Sinapyl alcohol dehydro 96.7 0.0015 5.2E-08 64.0 6.0 74 85-185 187-261 (366)
399 3m6i_A L-arabinitol 4-dehydrog 96.7 0.0061 2.1E-07 59.6 10.3 78 85-184 179-261 (363)
400 2vhw_A Alanine dehydrogenase; 96.7 0.0031 1.1E-07 62.0 8.0 76 84-185 166-241 (377)
401 4a0s_A Octenoyl-COA reductase/ 96.7 0.0036 1.2E-07 63.1 8.7 36 84-119 219-254 (447)
402 4f3y_A DHPR, dihydrodipicolina 96.7 0.0042 1.4E-07 57.9 8.4 36 84-119 5-42 (272)
403 3jyo_A Quinate/shikimate dehyd 96.7 0.00067 2.3E-08 63.9 3.0 38 83-121 124-162 (283)
404 3fbg_A Putative arginate lyase 96.7 0.0031 1.1E-07 61.3 7.8 36 85-120 150-185 (346)
405 4g65_A TRK system potassium up 96.7 0.0053 1.8E-07 62.0 9.6 73 86-182 3-75 (461)
406 3gms_A Putative NADPH:quinone 96.7 0.002 6.8E-08 62.5 6.1 37 84-120 143-179 (340)
407 3t4e_A Quinate/shikimate dehyd 96.7 0.0059 2E-07 58.1 9.1 85 83-185 145-230 (312)
408 3rui_A Ubiquitin-like modifier 96.7 0.011 3.8E-07 56.6 11.0 35 84-119 32-67 (340)
409 1jvb_A NAD(H)-dependent alcoho 96.7 0.0028 9.6E-08 61.6 7.1 36 85-120 170-206 (347)
410 4dup_A Quinone oxidoreductase; 96.6 0.0024 8.1E-08 62.3 6.5 37 84-120 166-202 (353)
411 2d8a_A PH0655, probable L-thre 96.6 0.0031 1E-07 61.3 6.8 35 85-120 167-202 (348)
412 7mdh_A Protein (malate dehydro 96.6 0.02 7E-07 55.6 12.4 176 85-301 31-215 (375)
413 2xxj_A L-LDH, L-lactate dehydr 96.6 0.013 4.5E-07 55.8 11.0 112 87-229 1-116 (310)
414 2nqt_A N-acetyl-gamma-glutamyl 96.5 0.0051 1.7E-07 59.6 8.0 34 85-118 8-47 (352)
415 1ldn_A L-lactate dehydrogenase 96.5 0.023 7.9E-07 54.3 12.4 116 86-229 6-123 (316)
416 3krt_A Crotonyl COA reductase; 96.5 0.0054 1.9E-07 62.0 8.2 36 84-119 227-262 (456)
417 2vn8_A Reticulon-4-interacting 96.4 0.0082 2.8E-07 58.9 8.8 35 84-118 182-216 (375)
418 1iz0_A Quinone oxidoreductase; 96.4 0.0043 1.5E-07 58.9 6.6 36 85-120 125-160 (302)
419 1t2d_A LDH-P, L-lactate dehydr 96.4 0.026 8.8E-07 54.1 12.0 120 86-229 4-126 (322)
420 2vns_A Metalloreductase steap3 96.4 0.0053 1.8E-07 55.2 6.7 35 85-120 27-61 (215)
421 1e3j_A NADP(H)-dependent ketos 96.4 0.017 5.8E-07 56.1 10.8 35 85-120 168-202 (352)
422 3orq_A N5-carboxyaminoimidazol 96.4 0.011 3.6E-07 58.2 9.3 70 84-181 10-79 (377)
423 3vh1_A Ubiquitin-like modifier 96.4 0.019 6.4E-07 59.1 11.2 35 84-119 325-360 (598)
424 2i6t_A Ubiquitin-conjugating e 96.3 0.019 6.4E-07 54.5 10.3 111 85-229 13-125 (303)
425 2dq4_A L-threonine 3-dehydroge 96.3 0.0062 2.1E-07 59.0 7.0 35 85-120 164-199 (343)
426 1p77_A Shikimate 5-dehydrogena 96.3 0.0037 1.3E-07 58.5 5.2 37 83-120 116-152 (272)
427 4gsl_A Ubiquitin-like modifier 96.2 0.024 8.3E-07 58.3 11.2 36 84-120 324-360 (615)
428 1hyh_A L-hicdh, L-2-hydroxyiso 96.2 0.032 1.1E-06 53.1 11.6 115 87-229 2-122 (309)
429 4e4t_A Phosphoribosylaminoimid 96.2 0.0087 3E-07 59.7 7.5 71 83-181 32-102 (419)
430 2cdc_A Glucose dehydrogenase g 96.2 0.0049 1.7E-07 60.3 5.6 36 84-120 179-214 (366)
431 1guz_A Malate dehydrogenase; o 96.2 0.03 1E-06 53.3 10.9 116 87-229 1-118 (310)
432 2hjs_A USG-1 protein homolog; 96.1 0.0086 3E-07 57.8 7.1 31 86-116 6-39 (340)
433 2h6e_A ADH-4, D-arabinose 1-de 96.1 0.0058 2E-07 59.2 5.9 35 85-120 170-206 (344)
434 2hjr_A Malate dehydrogenase; m 96.1 0.041 1.4E-06 52.8 11.8 117 86-229 14-131 (328)
435 3gaz_A Alcohol dehydrogenase s 96.1 0.009 3.1E-07 57.9 7.1 33 84-116 149-181 (343)
436 2d59_A Hypothetical protein PH 96.1 0.031 1E-06 46.7 9.3 32 86-117 22-56 (144)
437 3don_A Shikimate dehydrogenase 96.1 0.0066 2.2E-07 56.8 5.6 37 84-121 115-152 (277)
438 2ph5_A Homospermidine synthase 96.0 0.0095 3.2E-07 59.5 6.9 95 86-231 13-114 (480)
439 3p2o_A Bifunctional protein fo 96.0 0.019 6.7E-07 53.3 8.5 37 82-118 156-192 (285)
440 3q2o_A Phosphoribosylaminoimid 96.0 0.028 9.5E-07 55.4 10.2 70 83-180 11-80 (389)
441 1tt5_B Ubiquitin-activating en 96.0 0.056 1.9E-06 53.8 12.3 126 85-236 39-180 (434)
442 2r00_A Aspartate-semialdehyde 96.0 0.034 1.2E-06 53.6 10.4 32 86-117 3-37 (336)
443 2d4a_B Malate dehydrogenase; a 96.0 0.031 1.1E-06 53.1 10.1 112 88-230 1-117 (308)
444 2ozp_A N-acetyl-gamma-glutamyl 96.0 0.015 5.2E-07 56.2 7.9 33 86-118 4-37 (345)
445 2ewd_A Lactate dehydrogenase,; 96.0 0.047 1.6E-06 52.1 11.3 118 86-230 4-122 (317)
446 1a5z_A L-lactate dehydrogenase 95.9 0.047 1.6E-06 52.2 11.1 114 87-229 1-116 (319)
447 1y81_A Conserved hypothetical 95.9 0.03 1E-06 46.4 8.4 36 83-118 11-49 (138)
448 1oi7_A Succinyl-COA synthetase 95.9 0.12 4.2E-06 48.4 13.7 30 85-114 6-35 (288)
449 1mv8_A GMD, GDP-mannose 6-dehy 95.9 0.014 4.8E-07 58.5 7.6 34 87-121 1-34 (436)
450 3pwk_A Aspartate-semialdehyde 95.9 0.0092 3.2E-07 58.0 5.8 27 86-112 2-28 (366)
451 4dll_A 2-hydroxy-3-oxopropiona 95.8 0.033 1.1E-06 53.3 9.6 36 85-121 30-65 (320)
452 3gqv_A Enoyl reductase; medium 95.8 0.035 1.2E-06 54.3 10.0 34 84-117 163-196 (371)
453 1kjq_A GART 2, phosphoribosylg 95.8 0.036 1.2E-06 54.5 10.0 72 85-182 10-81 (391)
454 3pwz_A Shikimate dehydrogenase 95.8 0.015 5.2E-07 54.2 6.8 37 83-120 117-154 (272)
455 2b5w_A Glucose dehydrogenase; 95.8 0.02 6.8E-07 55.7 7.9 34 86-120 173-209 (357)
456 1tt5_A APPBP1, amyloid protein 95.8 0.024 8.1E-07 58.1 8.7 126 85-236 31-163 (531)
457 3vtf_A UDP-glucose 6-dehydroge 95.8 0.021 7.2E-07 56.9 8.0 36 85-121 20-55 (444)
458 1edz_A 5,10-methylenetetrahydr 95.7 0.038 1.3E-06 52.4 9.4 82 83-185 174-255 (320)
459 4a5o_A Bifunctional protein fo 95.7 0.03 1E-06 52.0 8.5 37 82-118 157-193 (286)
460 1pl8_A Human sorbitol dehydrog 95.7 0.042 1.5E-06 53.3 10.1 35 85-120 171-206 (356)
461 1cdo_A Alcohol dehydrogenase; 95.7 0.031 1.1E-06 54.7 9.2 36 84-120 191-227 (374)
462 1iuk_A Hypothetical protein TT 95.7 0.024 8.3E-07 47.1 7.1 32 86-117 13-47 (140)
463 1p9l_A Dihydrodipicolinate red 95.7 0.047 1.6E-06 49.9 9.5 74 87-184 1-78 (245)
464 1vj0_A Alcohol dehydrogenase, 95.7 0.027 9.2E-07 55.3 8.5 35 85-120 195-230 (380)
465 2jhf_A Alcohol dehydrogenase E 95.7 0.037 1.3E-06 54.1 9.5 35 85-120 191-226 (374)
466 3l07_A Bifunctional protein fo 95.7 0.034 1.2E-06 51.7 8.5 36 83-118 158-193 (285)
467 4a26_A Putative C-1-tetrahydro 95.6 0.033 1.1E-06 52.1 8.4 36 83-118 162-197 (300)
468 1gpj_A Glutamyl-tRNA reductase 95.6 0.02 6.7E-07 56.8 7.4 36 84-120 165-201 (404)
469 3ax6_A Phosphoribosylaminoimid 95.6 0.036 1.2E-06 54.3 9.3 69 86-182 1-69 (380)
470 3o8q_A Shikimate 5-dehydrogena 95.6 0.012 3.9E-07 55.3 5.3 37 83-120 123-160 (281)
471 2nu8_A Succinyl-COA ligase [AD 95.6 0.14 4.8E-06 48.1 12.8 31 85-115 6-36 (288)
472 1xyg_A Putative N-acetyl-gamma 95.6 0.014 4.7E-07 56.9 6.0 34 85-118 15-49 (359)
473 1e3i_A Alcohol dehydrogenase, 95.6 0.037 1.3E-06 54.2 9.2 35 85-120 195-230 (376)
474 4dgs_A Dehydrogenase; structur 95.6 0.056 1.9E-06 52.0 10.2 37 83-120 168-204 (340)
475 1t4b_A Aspartate-semialdehyde 95.6 0.025 8.4E-07 55.2 7.6 26 86-111 1-27 (367)
476 3dr3_A N-acetyl-gamma-glutamyl 95.6 0.076 2.6E-06 51.0 10.9 34 86-119 4-38 (337)
477 4dvj_A Putative zinc-dependent 95.6 0.024 8.3E-07 55.3 7.7 36 85-120 171-207 (363)
478 1lld_A L-lactate dehydrogenase 95.6 0.078 2.7E-06 50.5 11.1 115 86-228 7-123 (319)
479 3gg2_A Sugar dehydrogenase, UD 95.6 0.026 8.7E-07 56.8 7.9 34 87-121 3-36 (450)
480 4gx0_A TRKA domain protein; me 95.5 0.068 2.3E-06 55.4 11.3 69 87-184 349-417 (565)
481 3k5i_A Phosphoribosyl-aminoimi 95.5 0.033 1.1E-06 55.2 8.5 70 85-181 23-92 (403)
482 4ej6_A Putative zinc-binding d 95.5 0.026 8.9E-07 55.2 7.6 35 85-120 182-217 (370)
483 3ngx_A Bifunctional protein fo 95.5 0.032 1.1E-06 51.5 7.6 35 84-118 148-182 (276)
484 3hg7_A D-isomer specific 2-hyd 95.5 0.078 2.7E-06 50.6 10.6 37 83-120 137-173 (324)
485 2fzw_A Alcohol dehydrogenase c 95.5 0.032 1.1E-06 54.6 8.1 36 84-120 189-225 (373)
486 3uko_A Alcohol dehydrogenase c 95.5 0.019 6.4E-07 56.4 6.4 36 84-120 192-228 (378)
487 3tqh_A Quinone oxidoreductase; 95.4 0.019 6.6E-07 54.9 6.3 74 84-184 151-224 (321)
488 3uog_A Alcohol dehydrogenase; 95.4 0.026 8.8E-07 55.1 7.3 36 84-120 188-223 (363)
489 3ip1_A Alcohol dehydrogenase, 95.4 0.047 1.6E-06 54.1 9.2 36 84-120 212-248 (404)
490 3d4o_A Dipicolinate synthase s 95.4 0.028 9.7E-07 53.0 7.3 37 83-120 152-188 (293)
491 3ijp_A DHPR, dihydrodipicolina 95.4 0.066 2.3E-06 50.0 9.5 34 85-118 20-55 (288)
492 1h2b_A Alcohol dehydrogenase; 95.4 0.029 1E-06 54.6 7.5 35 85-120 186-221 (359)
493 2rir_A Dipicolinate synthase, 95.4 0.029 9.8E-07 53.2 7.2 71 83-184 154-224 (300)
494 1xa0_A Putative NADPH dependen 95.4 0.013 4.6E-07 56.2 4.9 33 88-120 152-184 (328)
495 1uuf_A YAHK, zinc-type alcohol 95.3 0.03 1E-06 54.7 7.5 74 85-185 194-267 (369)
496 4g65_A TRK system potassium up 95.3 0.073 2.5E-06 53.6 10.4 98 85-227 234-331 (461)
497 3cmm_A Ubiquitin-activating en 95.3 0.077 2.6E-06 58.4 11.2 123 84-236 25-153 (1015)
498 1piw_A Hypothetical zinc-type 95.2 0.02 6.7E-07 55.8 5.7 35 85-120 179-213 (360)
499 3evt_A Phosphoglycerate dehydr 95.2 0.03 1E-06 53.6 6.8 38 82-120 133-170 (324)
500 2dwc_A PH0318, 433AA long hypo 95.2 0.046 1.6E-06 54.6 8.6 73 85-183 18-90 (433)
No 1
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=100.00 E-value=3.4e-52 Score=421.77 Aligned_cols=396 Identities=88% Similarity=1.390 Sum_probs=304.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..++++|||||||||||++|+++|+++|++|+++++..+.......+...+.....+.+.+..+......++.++.+|++
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 34688999999999999999999999999999999864321110000011111111111222221222357899999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIE 242 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~ 242 (479)
|.+++.++++..++|+||||||.........++.++..++++|+.|+.+++++|++.+.+++|||+||.++||....++.
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~ 167 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIE 167 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBC
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCC
Confidence 99999999985559999999997654433444444445789999999999999999886339999999999998766777
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+.++..+.+.++..+.+..+.+.|+.||+++|.+++.+++++|++++++||++||||+..+....+.++++..+.|.+.
T Consensus 168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 247 (404)
T 1i24_A 168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 247 (404)
T ss_dssp SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchh
Confidence 77655443332222223556788999999999999999988889999999999999998764333334455555566666
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHHhhhcCCc
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLD 402 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~~~~~g~~ 402 (479)
.++..++..+..++++.+++++.+.++|+||+|+|++++.+++++...|+.++||++++.+|+.|+++.+.+.++.+|.+
T Consensus 248 ~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 248 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCC
T ss_pred hHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHhhCCC
Confidence 77888999999999988899989999999999999999999998665453359999987799999999999975556777
Q ss_pred ceeeecCCCCcccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHHhcccCCcCCCCCcceecccccCCcccc
Q 011706 403 VKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQFKDRVDSKQIMPSVSWRKIGTKPKTVA 478 (479)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (479)
+++...|.+........+.+|++|+++|||+|+++++++++.+++|+++++++++.+.+.|...|++.+.+.|+|.
T Consensus 328 ~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (404)
T 1i24_A 328 VKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSMT 403 (404)
T ss_dssp CCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGGCCGGGSSCCCCTTTCCSSCCCC-
T ss_pred ccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhhhhccChhhccCCccccccceeecccc
Confidence 7766666544333344566899999889999999999999999999999999999999999999999999999874
No 2
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=100.00 E-value=9.4e-46 Score=367.52 Aligned_cols=314 Identities=21% Similarity=0.266 Sum_probs=253.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccC----CCceeEEEc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLT----GKNIELYIG 159 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~v~~ 159 (479)
+++|+|||||||||||++|+++|+++|++|++++|....... ....+.... ..+++++.+
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 86 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY----------------NLDEVKTLVSTEQWSRFCFIEG 86 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH----------------HHHHHHHTSCHHHHTTEEEEEC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchh----------------hhhhhhhccccccCCceEEEEc
Confidence 457899999999999999999999999999999986542111 111111111 157999999
Q ss_pred ccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC
Q 011706 160 DICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~ 239 (479)
|++|.+++.++++ ++|+|||+||.........+ +...+++|+.|+.+++++|++.+++ +|||+||.++||....
T Consensus 87 Dl~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~-~~v~~SS~~vyg~~~~ 160 (351)
T 3ruf_A 87 DIRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVD---PITTNATNITGFLNILHAAKNAQVQ-SFTYAASSSTYGDHPA 160 (351)
T ss_dssp CTTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHC---HHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGGTTCCC
T ss_pred cCCCHHHHHHHhc--CCCEEEECCccCCcchhhhC---HHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEecHHhcCCCCC
Confidence 9999999999999 89999999997654443333 3557899999999999999999987 9999999999987654
Q ss_pred -CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 240 -DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 240 -~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
++.|+ .+..|.+.|+.+|+++|.+++.+++++|++++++||++||||+..+ .
T Consensus 161 ~~~~E~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-------------~ 213 (351)
T 3ruf_A 161 LPKVEE--------------NIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDP-------------N 213 (351)
T ss_dssp SSBCTT--------------CCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCC-------------C
T ss_pred CCCccC--------------CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCC-------------C
Confidence 56665 3556789999999999999999999999999999999999998654 2
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC-CCCCCceEEEeCC-CCcCHHHHHHHHHHHh
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP-AQPGEFRVFNQFT-EQFSVNQLAALVTKAG 396 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~~g~~~~~ni~~-~~~s~~el~~~i~~~~ 396 (479)
+.+..++..++..+..++++.+++++++.++|+|++|+|++++.++.++ ...++ +||+++ +.+|+.|+++.+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~--~~ni~~~~~~s~~e~~~~i~~~- 290 (351)
T 3ruf_A 214 GAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDN--IYNVAVGDRTTLNELSGYIYDE- 290 (351)
T ss_dssp STTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE--EEEESCSCCEEHHHHHHHHHHH-
T ss_pred cchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCC--EEEeCCCCcccHHHHHHHHHHH-
Confidence 2334567888999999999999999999999999999999999999873 33444 999998 679999999999998
Q ss_pred hhcCCc-----ceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhc
Q 011706 397 EKLGLD-----VKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFK 453 (479)
Q Consensus 397 ~~~g~~-----~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~ 453 (479)
+|.+ .+....+.. ........+|++|+++ |||+|+++++++++++++|++...
T Consensus 291 --~g~~~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 349 (351)
T 3ruf_A 291 --LNLIHHIDKLSIKYREFR--SGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFL 349 (351)
T ss_dssp --HHTTCCC-----EEECCC--TTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred --hCcccccccccccccCCC--CCccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 5552 222222221 2233456799999987 999999999999999999998654
No 3
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=100.00 E-value=2.7e-45 Score=363.46 Aligned_cols=313 Identities=19% Similarity=0.253 Sum_probs=249.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
..++|+|||||||||||++|+++|+++| ++|+++++....... ..+... ....++.++.+|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~---------------~~l~~~--~~~~~~~~~~~D 83 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL---------------NNVKSI--QDHPNYYFVKGE 83 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG---------------GGGTTT--TTCTTEEEEECC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccch---------------hhhhhh--ccCCCeEEEEcC
Confidence 3568899999999999999999999999 678888775421110 001111 112589999999
Q ss_pred cCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC--
Q 011706 161 ICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-- 238 (479)
Q Consensus 161 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~-- 238 (479)
++|++.+.++++..++|+|||+||.........+ +...+++|+.|+.+++++|++.+++ +|||+||.++||...
T Consensus 84 l~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~-~~v~~SS~~vy~~~~~~ 159 (346)
T 4egb_A 84 IQNGELLEHVIKERDVQVIVNFAAESHVDRSIEN---PIPFYDTNVIGTVTLLELVKKYPHI-KLVQVSTDEVYGSLGKT 159 (346)
T ss_dssp TTCHHHHHHHHHHHTCCEEEECCCCC------------CHHHHHHTHHHHHHHHHHHHSTTS-EEEEEEEGGGGCCCCSS
T ss_pred CCCHHHHHHHHhhcCCCEEEECCcccchhhhhhC---HHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeCchHHhCCCCcC
Confidence 9999999999996569999999997654433333 3567899999999999999999987 999999999999863
Q ss_pred CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 239 IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 239 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
.++.|+ .+..|.+.|+.+|+++|.+++.+++++|++++++||++||||+..+
T Consensus 160 ~~~~E~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-------------- 211 (346)
T 4egb_A 160 GRFTEE--------------TPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYP-------------- 211 (346)
T ss_dssp CCBCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--------------
T ss_pred CCcCCC--------------CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCc--------------
Confidence 355665 3557789999999999999999999899999999999999998654
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhh
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGE 397 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~ 397 (479)
..++..++..+..++++.+++++.+.++|+|++|+|++++.+++++. .|+ +||+++ +.+|+.|+++.+.+.
T Consensus 212 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~--~~~i~~~~~~s~~e~~~~i~~~-- 283 (346)
T 4egb_A 212 ---EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGE--VYNIGGNNEKTNVEVVEQIITL-- 283 (346)
T ss_dssp ---TSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTC--EEEECCSCCEEHHHHHHHHHHH--
T ss_pred ---cchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCC--EEEECCCCceeHHHHHHHHHHH--
Confidence 23567888899999999999999999999999999999999999876 455 999999 579999999999998
Q ss_pred hcCCcce-eeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhccc
Q 011706 398 KLGLDVK-TISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDR 455 (479)
Q Consensus 398 ~~g~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~ 455 (479)
+|.+.+ +...+.. ......+.+|++|+++ |||+|+++++++++++++|++..+++
T Consensus 284 -~g~~~~~~~~~~~~--~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~ 340 (346)
T 4egb_A 284 -LGKTKKDIEYVTDR--LGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNEEW 340 (346)
T ss_dssp -HTCCGGGCEEECC----CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHH
T ss_pred -hCCCcccccccCCC--CCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 777655 3333322 2233456789999986 99999999999999999999886653
No 4
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=100.00 E-value=1.5e-44 Score=352.90 Aligned_cols=294 Identities=20% Similarity=0.248 Sum_probs=248.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++|+++|+++|++|++++|..... . + .+++++.+|++ .+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------------~-~-----~~~~~~~~Dl~-~~ 54 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK--------------------A-I-----NDYEYRVSDYT-LE 54 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------------------CCEEEECCCC-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc--------------------c-C-----CceEEEEcccc-HH
Confidence 57999999999999999999999999999999862210 0 0 27889999999 99
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~ 244 (479)
++.++++ ++|+|||+|+..... ++...+++|+.++.+++++|++.+++ +|||+||.++||.... ++.|+
T Consensus 55 ~~~~~~~--~~d~Vih~a~~~~~~-------~~~~~~~~n~~~~~~ll~a~~~~~~~-r~v~~SS~~vyg~~~~~~~~E~ 124 (311)
T 3m2p_A 55 DLINQLN--DVDAVVHLAATRGSQ-------GKISEFHDNEILTQNLYDACYENNIS-NIVYASTISAYSDETSLPWNEK 124 (311)
T ss_dssp HHHHHTT--TCSEEEECCCCCCSS-------SCGGGTHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGCCCGGGCSBCTT
T ss_pred HHHHhhc--CCCEEEEccccCCCC-------ChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEccHHHhCCCCCCCCCCC
Confidence 9999999 899999999976543 23456789999999999999999987 9999999999997653 55665
Q ss_pred ceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccch
Q 011706 245 YITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~ 324 (479)
.+..|.+.|+.+|+++|++++.+++++|++++++||++||||+..+ ..+
T Consensus 125 --------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-----------------~~~ 173 (311)
T 3m2p_A 125 --------------ELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKN-----------------NYM 173 (311)
T ss_dssp --------------SCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC-------------------CCH
T ss_pred --------------CCCCCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCC-----------------CCH
Confidence 3556789999999999999999999899999999999999998653 135
Q ss_pred HHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCcc
Q 011706 325 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLDV 403 (479)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~~ 403 (479)
+..++..+..++++.+++++++.++|+|++|+|++++.+++++. .++ +||+++ +.+|+.|+++.+.+. +|.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~--~~~i~~~~~~s~~e~~~~i~~~---~g~~~ 247 (311)
T 3m2p_A 174 INRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSG--TFNIGSGDALTNYEVANTINNA---FGNKD 247 (311)
T ss_dssp HHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCE--EEEECCSCEECHHHHHHHHHHH---TTCTT
T ss_pred HHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCC--eEEeCCCCcccHHHHHHHHHHH---hCCCC
Confidence 77888889999999999988999999999999999999999876 344 999998 679999999999998 88888
Q ss_pred eeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 404 KTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
++...+.+ .........+|++|+++ |||+|+++++++++++++|++...+
T Consensus 248 ~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 298 (311)
T 3m2p_A 248 NLLVKNPN-ANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDD 298 (311)
T ss_dssp CEEECSSS-BCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC---
T ss_pred cceecCCC-CCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhccc
Confidence 77776652 22334556799999988 9999999999999999999876544
No 5
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=100.00 E-value=5.9e-45 Score=355.99 Aligned_cols=305 Identities=21% Similarity=0.303 Sum_probs=240.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
||+|||||||||||++|+++|+++| .|+++++....... ....++.++.+|++| +
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~-----------------------~~~~~~~~~~~Dl~~-~ 55 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE-----------------------FVNEAARLVKADLAA-D 55 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG-----------------------GSCTTEEEECCCTTT-S
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh-----------------------hcCCCcEEEECcCCh-H
Confidence 4689999999999999999999999 55556554321100 012578899999999 8
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~ 244 (479)
++.++++ ++|+|||+|+....... ..++...+++|+.|+.+++++|++.+++ +|||+||.++||.... +..|+
T Consensus 56 ~~~~~~~--~~d~vih~a~~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~~vyg~~~~~~~~E~ 129 (313)
T 3ehe_A 56 DIKDYLK--GAEEVWHIAANPDVRIG---AENPDEIYRNNVLATYRLLEAMRKAGVS-RIVFTSTSTVYGEAKVIPTPED 129 (313)
T ss_dssp CCHHHHT--TCSEEEECCCCCCCC-C---CCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGGCSCSSSSBCTT
T ss_pred HHHHHhc--CCCEEEECCCCCChhhh---hhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeCchHHhCcCCCCCCCCC
Confidence 8999998 89999999996543322 2345678899999999999999999987 9999999999997654 55554
Q ss_pred ceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccch
Q 011706 245 YITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~ 324 (479)
.+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+..+ ..
T Consensus 130 --------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~------------------~~ 177 (313)
T 3ehe_A 130 --------------YPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH------------------GV 177 (313)
T ss_dssp --------------SCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC------------------SH
T ss_pred --------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc------------------Ch
Confidence 3556789999999999999999999999999999999999998642 34
Q ss_pred HHHHHHHHhcC-CCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCc
Q 011706 325 LNRFCVQAAVG-HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLD 402 (479)
Q Consensus 325 ~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~ 402 (479)
+..++..+..+ .++.+++++++.++|+|++|+|++++.+++.. ..+ ++||+++ +.+|+.|+++.+.+. +|.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~--~~~ni~~~~~~s~~e~~~~i~~~---~g~~ 251 (313)
T 3ehe_A 178 IYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERV--NIFNIGSEDQIKVKRIAEIVCEE---LGLS 251 (313)
T ss_dssp HHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSE--EEEECCCSCCEEHHHHHHHHHHH---TTCC
T ss_pred HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCC--ceEEECCCCCeeHHHHHHHHHHH---hCCC
Confidence 66777777776 56778899999999999999999999999833 333 4999998 689999999999998 8888
Q ss_pred ceeeecCCCCc-ccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHHhcccCCcC
Q 011706 403 VKTISVPNPRV-EAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQFKDRVDSK 459 (479)
Q Consensus 403 ~~~~~~~~~~~-~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (479)
.++...+.... ......+.+|++|+++|||+|+++++++++++++|++.+++....+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~~~~~~~~ 309 (313)
T 3ehe_A 252 PRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVEDLDEEGHH 309 (313)
T ss_dssp CEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHHHHC----
T ss_pred CceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCccccccc
Confidence 77766553221 2233446789999988999999999999999999999988765543
No 6
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=100.00 E-value=9.4e-45 Score=358.79 Aligned_cols=322 Identities=22% Similarity=0.264 Sum_probs=251.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+|+||||||+||||++|+++|+++|++|++++|...... +..+.+....+.++.++.+|++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----------------~~~~~~~~~~~~~~~~~~~Dl~d~ 67 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKR----------------EAIARIEKITGKTPAFHETDVSDE 67 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCT----------------HHHHHHHHHHSCCCEEECCCTTCH
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchH----------------HHHHHHHhhcCCCceEEEeecCCH
Confidence 4689999999999999999999999999999988654211 112222222245789999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEE 243 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e 243 (479)
+++.++++..++|+||||||.........++ ...+++|+.++.++++++++.+.+ +|||+||.++||.... ++.|
T Consensus 68 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~~~g~~~~~~~~e 143 (341)
T 3enk_A 68 RALARIFDAHPITAAIHFAALKAVGESVAKP---IEYYRNNLDSLLSLLRVMRERAVK-RIVFSSSATVYGVPERSPIDE 143 (341)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCHHHHHHCH---HHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGBCSCSSSSBCT
T ss_pred HHHHHHHhccCCcEEEECccccccCccccCh---HHHHHHHHHHHHHHHHHHHhCCCC-EEEEEecceEecCCCCCCCCC
Confidence 9999999877899999999976543333332 456889999999999999999887 9999999999987654 5555
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC-CceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-IRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-l~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
+ .+..+.+.|+.+|+++|.+++.++.+++ ++++++||++||||+.... ......+...
T Consensus 144 ~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~-------~g~~~~~~~~ 202 (341)
T 3enk_A 144 T--------------FPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGL-------IGEDPAGIPN 202 (341)
T ss_dssp T--------------SCCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSS-------CCCCCSSSCS
T ss_pred C--------------CCCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccc-------cCCCcccCcc
Confidence 5 3556789999999999999999998876 9999999999999964210 0001122223
Q ss_pred chHHHHHHHHhcC--CCeEEec------CCCceeccccHHHHHHHHHHHHhCC--CCCCCceEEEeCC-CCcCHHHHHHH
Q 011706 323 TALNRFCVQAAVG--HPLTVYG------KGGQTRGYLDIRDTVQCVELAIANP--AQPGEFRVFNQFT-EQFSVNQLAAL 391 (479)
Q Consensus 323 ~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~ni~~-~~~s~~el~~~ 391 (479)
.++. ++.+...+ .++.+++ ++.+.++|+|++|+|++++.+++++ ...++ +||+++ +.+|+.|+++.
T Consensus 203 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~--~~ni~~~~~~s~~e~~~~ 279 (341)
T 3enk_A 203 NLMP-YVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASL--TVNLGTGRGYSVLEVVRA 279 (341)
T ss_dssp SHHH-HHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCE--EEEESCSCCEEHHHHHHH
T ss_pred chHH-HHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcce--EEEeCCCCceeHHHHHHH
Confidence 3444 44444444 4677777 7889999999999999999999863 23344 999998 67999999999
Q ss_pred HHHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhccc
Q 011706 392 VTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDR 455 (479)
Q Consensus 392 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~ 455 (479)
+.+. +|.+.++...+... .....+.+|++|+++ |||+|+++++++++++++|++.+++.
T Consensus 280 i~~~---~g~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~ 339 (341)
T 3enk_A 280 FEKA---SGRAVPYELVARRP--GDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPRG 339 (341)
T ss_dssp HHHH---HCSCCCEEEECCCT--TCCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHSTTS
T ss_pred HHHH---hCCCcceeeCCCCC--CCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCcc
Confidence 9998 88888777766543 233456789999986 99999999999999999999886653
No 7
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=100.00 E-value=2.6e-44 Score=351.18 Aligned_cols=297 Identities=24% Similarity=0.347 Sum_probs=238.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|||||||||||++|+++|+++|++|++++|....... ....+++++.+|++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------------------~~~~~~~~~~~Dl~d~~- 56 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-----------------------FVNPSAELHVRDLKDYS- 56 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGG-----------------------GSCTTSEEECCCTTSTT-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchh-----------------------hcCCCceEEECccccHH-
Confidence 589999999999999999999999999999886542111 01357889999999998
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCCc
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEGY 245 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~~ 245 (479)
+.++++ + |+|||+||......... ++...+++|+.|+.+++++|++.+++ +|||+||.++||.... ++.|+
T Consensus 57 ~~~~~~--~-d~vih~A~~~~~~~~~~---~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~vyg~~~~~~~~e~- 128 (312)
T 3ko8_A 57 WGAGIK--G-DVVFHFAANPEVRLSTT---EPIVHFNENVVATFNVLEWARQTGVR-TVVFASSSTVYGDADVIPTPEE- 128 (312)
T ss_dssp TTTTCC--C-SEEEECCSSCSSSGGGS---CHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCSCSSSSBCTT-
T ss_pred HHhhcC--C-CEEEECCCCCCchhhhh---CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeCcHHHhCCCCCCCCCCC-
Confidence 888887 5 99999999654333333 34667899999999999999999987 9999999999998654 55554
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
.+..|.+.|+.+|+++|.+++.+++++|++++++||++||||+... ..+
T Consensus 129 -------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~------------------~~~ 177 (312)
T 3ko8_A 129 -------------EPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH------------------GVI 177 (312)
T ss_dssp -------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS------------------SHH
T ss_pred -------------CCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC------------------ChH
Confidence 3556789999999999999999999999999999999999998642 245
Q ss_pred HHHHHHHhcC-CCeEEecCCCceeccccHHHHHHHHHHHHhC---CCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 326 NRFCVQAAVG-HPLTVYGKGGQTRGYLDIRDTVQCVELAIAN---PAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 326 ~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~---~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
..++..+..+ .++.+++++.+.++|+|++|+|++++.++++ +...+ .+||+++ +.+|+.|+++.+.+. +|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~--~~~ni~~~~~~s~~e~~~~i~~~---~g 252 (312)
T 3ko8_A 178 YDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF--LALNVGNVDAVRVLDIAQIVAEV---LG 252 (312)
T ss_dssp HHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSE--EEEEESCSSCEEHHHHHHHHHHH---HT
T ss_pred HHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCC--cEEEEcCCCceeHHHHHHHHHHH---hC
Confidence 6677777776 4677888889999999999999999999987 33344 4999998 679999999999998 88
Q ss_pred CcceeeecCCCC----cccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHH
Q 011706 401 LDVKTISVPNPR----VEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 401 ~~~~~~~~~~~~----~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
.+.++...+... .........+|++|+++ |||+|+++++++++++++|++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~ 308 (312)
T 3ko8_A 253 LRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAK 308 (312)
T ss_dssp CCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHH
T ss_pred CCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 877777655321 11223456799999966 9999999999999999999875
No 8
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=100.00 E-value=3.5e-44 Score=355.65 Aligned_cols=304 Identities=22% Similarity=0.248 Sum_probs=248.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..++|+|||||||||||++|+++|+++|++|++++|.... .++.++.+|++
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------------------~~~~~~~~Dl~ 66 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------------------TGGEEVVGSLE 66 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------------------SCCSEEESCTT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------------------CCccEEecCcC
Confidence 4568899999999999999999999999999999986431 36889999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCC--C-C
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTP--N-I 239 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~--~-~ 239 (479)
|.+++.++++ ++|+|||+|+........ +..++++|+.|+.+++++|++.+++ +|||+||.+|||.. . .
T Consensus 67 d~~~~~~~~~--~~d~vih~A~~~~~~~~~-----~~~~~~~nv~~~~~ll~a~~~~~~~-~~V~~SS~~vyg~~~~~~~ 138 (347)
T 4id9_A 67 DGQALSDAIM--GVSAVLHLGAFMSWAPAD-----RDRMFAVNVEGTRRLLDAASAAGVR-RFVFASSGEVYPENRPEFL 138 (347)
T ss_dssp CHHHHHHHHT--TCSEEEECCCCCCSSGGG-----HHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGTTTTSCSSS
T ss_pred CHHHHHHHHh--CCCEEEECCcccCcchhh-----HHHHHHHHHHHHHHHHHHHHHcCCC-eEEEECCHHHhCCCCCCCC
Confidence 9999999999 899999999976543322 2567899999999999999999987 99999999999973 2 2
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeee-------------cCCCCchh
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY-------------GVRTDETA 306 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~-------------Gp~~~~~~ 306 (479)
++.|+ .+..+.+.|+.+|+++|.+++.+++++|++++++||++|| ||+..+..
T Consensus 139 ~~~E~--------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~ 204 (347)
T 4id9_A 139 PVTED--------------HPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRP 204 (347)
T ss_dssp SBCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHH
T ss_pred CcCCC--------------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCccccc
Confidence 55555 3556789999999999999999999999999999999999 77643210
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceecc----ccHHHHHHHHHHHHhCCCCCCCceEEEeCC-C
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGY----LDIRDTVQCVELAIANPAQPGEFRVFNQFT-E 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~ 381 (479)
......+ ....++..++..+..++++.+++++.+.++| +|++|+|++++.+++++...++ +|||++ +
T Consensus 205 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~--~~ni~~~~ 276 (347)
T 4id9_A 205 RIHQQQN------FGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGG--TFNLGADE 276 (347)
T ss_dssp HHHHHHH------HTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTE--EEEESCSS
T ss_pred ccccccc------cchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCC--eEEECCCC
Confidence 0000000 0124567788888899998999998999999 9999999999999998755555 999998 6
Q ss_pred CcCHHHHHHHHHHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhc
Q 011706 382 QFSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFK 453 (479)
Q Consensus 382 ~~s~~el~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~ 453 (479)
.+|+.|+++.+.+. +|.+.++...+.... .+.+|++|+++ |||+|+++++++++++++|++...
T Consensus 277 ~~s~~e~~~~i~~~---~g~~~~~~~~p~~~~-----~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 277 PADFAALLPKIAAL---TGLPIVTVDFPGDGV-----YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL 341 (347)
T ss_dssp CEEHHHHHHHHHHH---HCCCEEEEECSSCCC-----BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHH---hCCCCceeeCCCccc-----ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 79999999999998 888888776654432 56789999987 999999999999999999987644
No 9
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=100.00 E-value=1.4e-43 Score=347.48 Aligned_cols=300 Identities=22% Similarity=0.234 Sum_probs=241.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.+.|+|||||||||||++|+++|+++|++|++++|.... . . .++.++.+|++|
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--~-------------------~------l~~~~~~~Dl~d 62 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA--K-------------------L------PNVEMISLDIMD 62 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC--C-------------------C------TTEEEEECCTTC
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc--c-------------------c------ceeeEEECCCCC
Confidence 457899999999999999999999999999999885431 0 0 157889999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc-CCcceEEEeeccccccCC---CC
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF-RQECHLVKLGTMGEYGTP---NI 239 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-g~~~~~V~~SS~~v~g~~---~~ 239 (479)
++++.++++..++|+||||||........ .++...+++|+.|+.+++++|++. +.+ +|||+||.++||.. ..
T Consensus 63 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~---~~~~~~~~~Nv~g~~~l~~a~~~~~~~~-~iv~~SS~~v~g~~~~~~~ 138 (321)
T 2pk3_A 63 SQRVKKVISDIKPDYIFHLAAKSSVKDSW---LNKKGTFSTNVFGTLHVLDAVRDSNLDC-RILTIGSSEEYGMILPEES 138 (321)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHT---TCHHHHHHHHHHHHHHHHHHHHHHTCCC-EEEEEEEGGGTBSCCGGGC
T ss_pred HHHHHHHHHhcCCCEEEEcCcccchhhhh---hcHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEEccHHhcCCCCCCCC
Confidence 99999999855699999999975432222 234667899999999999999876 466 99999999999875 23
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDG 319 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g 319 (479)
+++|+ .+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+....
T Consensus 139 ~~~E~--------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-------------- 190 (321)
T 2pk3_A 139 PVSEE--------------NQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-------------- 190 (321)
T ss_dssp SBCTT--------------SCCBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT--------------
T ss_pred CCCCC--------------CCCCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC--------------
Confidence 55554 24456889999999999999999988999999999999999986531
Q ss_pred cccchHHHHHHHHhc---C--CCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHH
Q 011706 320 VFGTALNRFCVQAAV---G--HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVT 393 (479)
Q Consensus 320 ~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~ 393 (479)
.++..++..+.. | .++.+++++.+.++|+|++|+|++++.+++++. .|+ +||+++ ..+|+.|+++.+.
T Consensus 191 ---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~g~--~~~i~~~~~~s~~e~~~~i~ 264 (321)
T 2pk3_A 191 ---FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-TGD--VYNVCSGIGTRIQDVLDLLL 264 (321)
T ss_dssp ---SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-TTC--EEEESCSCEEEHHHHHHHHH
T ss_pred ---chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-CCC--eEEeCCCCCeeHHHHHHHHH
Confidence 234556666555 7 577888888899999999999999999998763 354 999998 5799999999999
Q ss_pred HHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHH
Q 011706 394 KAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 394 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
+. +|.+.++...|..........+.+|++|+++ |||+|+++++++++++++|++.
T Consensus 265 ~~---~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 320 (321)
T 2pk3_A 265 AM---ANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQ 320 (321)
T ss_dssp HH---SSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHT
T ss_pred HH---hCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhc
Confidence 98 8887776665521122233456789999987 9999999999999999999864
No 10
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.4e-43 Score=346.07 Aligned_cols=309 Identities=20% Similarity=0.293 Sum_probs=240.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
++|+||||||+||||++|+++|+++| ++|++++|....... +.+..+. ...++.++.+|++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~---------------~~~~~~~--~~~~~~~~~~Dl~ 64 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNP---------------ANLKDLE--DDPRYTFVKGDVA 64 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG---------------GGGTTTT--TCTTEEEEECCTT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCch---------------hHHhhhc--cCCceEEEEcCCC
Confidence 35789999999999999999999997 899999885421100 0011110 1357899999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC-CCC
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDI 241 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~-~~~ 241 (479)
|.+++.+++. ++|+||||||........ .++..++++|+.|+.+++++|.+.+..++|||+||.++||... .++
T Consensus 65 d~~~~~~~~~--~~d~vih~A~~~~~~~~~---~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~ 139 (336)
T 2hun_A 65 DYELVKELVR--KVDGVVHLAAESHVDRSI---SSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSF 139 (336)
T ss_dssp CHHHHHHHHH--TCSEEEECCCCCCHHHHH---HCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCB
T ss_pred CHHHHHHHhh--CCCEEEECCCCcChhhhh---hCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCc
Confidence 9999999996 899999999975432222 2345678999999999999999887534999999999998763 245
Q ss_pred cCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 242 EEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 242 ~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
.|+ .+..+.+.|+.+|+++|.+++.++.++|++++++||++||||+..+
T Consensus 140 ~E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~----------------- 188 (336)
T 2hun_A 140 TEN--------------DRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP----------------- 188 (336)
T ss_dssp CTT--------------BCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT-----------------
T ss_pred CCC--------------CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc-----------------
Confidence 554 2445678999999999999999999899999999999999998643
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
..++..++..+..++++.+++++.+.++|+|++|+|++++.++++.. .|+ +||+++ ..+|+.|+++.+.+. +|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~--~~~v~~~~~~s~~e~~~~i~~~---~g 262 (336)
T 2hun_A 189 EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SRE--IYNISAGEEKTNLEVVKIILRL---MG 262 (336)
T ss_dssp TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTC--EEEECCSCEECHHHHHHHHHHH---TT
T ss_pred CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCC--EEEeCCCCcccHHHHHHHHHHH---hC
Confidence 12456777788888888888988899999999999999999998653 455 999999 569999999999998 77
Q ss_pred Ccce-eeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 401 LDVK-TISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 401 ~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
.+.+ +...+... .....+.+|++|+++ |||+|+++++++++++++|++...+
T Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 316 (336)
T 2hun_A 263 KGEELIELVEDRP--GHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNEW 316 (336)
T ss_dssp CCSTTEEEECCCT--TCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHTHH
T ss_pred CCcccccccCCCC--CchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 6543 33333221 122345689999987 9999999999999999999986543
No 11
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=100.00 E-value=1.9e-43 Score=351.13 Aligned_cols=319 Identities=19% Similarity=0.224 Sum_probs=247.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+|||||||||||++|+++|+++|++|++++|....... .+....+.+......++.++.+|++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~Dl~d 92 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR------------NLDEVRSLVSEKQWSNFKFIQGDIRN 92 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH------------HHHHHHHHSCHHHHTTEEEEECCTTS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchh------------hHHHHhhhcccccCCceEEEECCCCC
Confidence 357899999999999999999999999999999986432100 00000111110012478999999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCc
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIE 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~ 242 (479)
.+++.++++ ++|+|||+||......... ++...+++|+.|+.+++++|++.+++ +|||+||.++|+.... ++.
T Consensus 93 ~~~~~~~~~--~~d~vih~A~~~~~~~~~~---~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~ 166 (352)
T 1sb8_A 93 LDDCNNACA--GVDYVLHQAALGSVPRSIN---DPITSNATNIDGFLNMLIAARDAKVQ-SFTYAASSSTYGDHPGLPKV 166 (352)
T ss_dssp HHHHHHHHT--TCSEEEECCSCCCHHHHHH---CHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGGTTCCCSSBC
T ss_pred HHHHHHHhc--CCCEEEECCcccCchhhhh---CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHhcCCCCCCCCC
Confidence 999999998 8999999999754322222 34567899999999999999999887 9999999999987643 555
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+ .+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+..+. +.+.
T Consensus 167 E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------------~~~~ 219 (352)
T 1sb8_A 167 ED--------------TIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPN-------------GAYA 219 (352)
T ss_dssp TT--------------CCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCC-------------STTC
T ss_pred CC--------------CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCC-------------cchh
Confidence 54 24466889999999999999999988999999999999999986431 1123
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC-CCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP-AQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
.++..++..+..+.++.+++++++.++|+|++|+|++++.++.+. ...+ ++||+++ +.+|+.|+++.+.+.++..|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~--~~~ni~~~~~~s~~e~~~~i~~~~~~~g 297 (352)
T 1sb8_A 220 AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN--QVYNIAVGGRTSLNQLFFALRDGLAENG 297 (352)
T ss_dssp CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS--EEEEESCSCCEEHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC--ceEEeCCCCCccHHHHHHHHHHHHHhcC
Confidence 456777888888998888898899999999999999999999863 2334 4999998 67999999999999832227
Q ss_pred Cccee--eecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHH
Q 011706 401 LDVKT--ISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 401 ~~~~~--~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
.+.+. ...+.. ........+|++|+++ |||+|+++++++++++++|++.
T Consensus 298 ~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 349 (352)
T 1sb8_A 298 VSYHREPVYRDFR--EGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 349 (352)
T ss_dssp CCCCCCCEEECCC--TTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCceecCCC--ccchhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 76552 222221 1123345689999987 9999999999999999999875
No 12
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=100.00 E-value=2.3e-43 Score=344.43 Aligned_cols=300 Identities=26% Similarity=0.367 Sum_probs=242.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+||||||+||||++++++|+++|++|++++|....... .+ ..++.++.+|++|+++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------------------~~----~~~~~~~~~Dl~~~~~ 57 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-------------------NV----PKGVPFFRVDLRDKEG 57 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-------------------GS----CTTCCEECCCTTCHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-------------------hc----ccCeEEEECCCCCHHH
Confidence 579999999999999999999999999999874321100 00 1357789999999999
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecc-ccccC-CC-CCCcC
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTM-GEYGT-PN-IDIEE 243 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~-~v~g~-~~-~~~~e 243 (479)
+.++++..++|+|||+|+......... ++...+++|+.|+.+++++|++.+++ +|||+||. ++||. .. .+..|
T Consensus 58 ~~~~~~~~~~d~vi~~a~~~~~~~~~~---~~~~~~~~N~~g~~~l~~a~~~~~~~-~iv~~SS~~~~~g~~~~~~~~~E 133 (311)
T 2p5y_A 58 VERAFREFRPTHVSHQAAQASVKVSVE---DPVLDFEVNLLGGLNLLEACRQYGVE-KLVFASTGGAIYGEVPEGERAEE 133 (311)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHHH---CHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEHHHHHCCCCTTCCBCT
T ss_pred HHHHHHhcCCCEEEECccccCchhhhh---CHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeCCChhhcCCCCCCCCcCC
Confidence 999998667999999999754322222 34567899999999999999998877 99999998 89986 32 24455
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+ .+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+..... . ..
T Consensus 134 ~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~-------------~-~~ 185 (311)
T 2p5y_A 134 T--------------WPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHG-------------E-AG 185 (311)
T ss_dssp T--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSS-------------T-TH
T ss_pred C--------------CCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCC-------------c-Cc
Confidence 4 244567899999999999999999889999999999999999864321 0 23
Q ss_pred hHHHHHHHHhcCCCeEEe-----cCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhh
Q 011706 324 ALNRFCVQAAVGHPLTVY-----GKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGE 397 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~ 397 (479)
++..++..+..+.++.++ +++.+.++|+|++|+|++++.+++++ ++ +||+++ +.+|+.|+++.+.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~---~~--~~~i~~~~~~s~~e~~~~i~~~-- 258 (311)
T 2p5y_A 186 VVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL---EG--IYNVGTGEGHTTREVLMAVAEA-- 258 (311)
T ss_dssp HHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC---CE--EEEESCSCCEEHHHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC---CC--EEEeCCCCCccHHHHHHHHHHH--
Confidence 456777778888888888 88888999999999999999999864 44 999998 679999999999998
Q ss_pred hcCCcceeeecCCCCcccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHH
Q 011706 398 KLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 398 ~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
+|.+.++...+.... ......+|++|+++|||+|+++++++++++++|++.
T Consensus 259 -~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 309 (311)
T 2p5y_A 259 -AGKAPEVQPAPPRPG--DLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRG 309 (311)
T ss_dssp -HTCCCCEEEECCCTT--CCSBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHT
T ss_pred -hCCCCCceeCCCCcc--chhhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHh
Confidence 887777766654322 224567899999779999999999999999998853
No 13
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=100.00 E-value=5.9e-43 Score=344.31 Aligned_cols=316 Identities=22% Similarity=0.303 Sum_probs=243.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
||+|||||||||||++|+++|+++|++|++++|...... +. + ..+++++.+|++|.+
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------------~~---~-~~~~~~~~~D~~~~~ 57 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------------------DA---I-TEGAKFYNGDLRDKA 57 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-------------------GG---S-CTTSEEEECCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-------------------hh---c-CCCcEEEECCCCCHH
Confidence 478999999999999999999999999999987543210 00 1 126889999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~ 244 (479)
++.++++..++|+|||+||......... ++..++++|+.|+.+++++|++.+++ +|||+||.++|+.... +++|+
T Consensus 58 ~~~~~~~~~~~d~vih~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~Ss~~~~~~~~~~~~~E~ 133 (330)
T 2c20_A 58 FLRDVFTQENIEAVMHFAADSLVGVSME---KPLQYYNNNVYGALCLLEVMDEFKVD-KFIFSSTAATYGEVDVDLITEE 133 (330)
T ss_dssp HHHHHHHHSCEEEEEECCCCCCHHHHHH---SHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEECCGGGGCSCSSSSBCTT
T ss_pred HHHHHHhhcCCCEEEECCcccCcccccc---CHHHHHHHHhHHHHHHHHHHHHcCCC-EEEEeCCceeeCCCCCCCCCcC
Confidence 9999998667999999999754322222 34567899999999999999998887 9999999999987543 55554
Q ss_pred ceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCC-CCcccc
Q 011706 245 YITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDY-DGVFGT 323 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~-~g~~~~ 323 (479)
.+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+.... .++ .+....
T Consensus 134 --------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~---------~g~~~~~~~~ 190 (330)
T 2c20_A 134 --------------TMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGI---------IGEDHRPETH 190 (330)
T ss_dssp --------------SCCCCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCS---------SCCCCSSCCS
T ss_pred --------------CCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCc---------cccccccccc
Confidence 24466899999999999999999988899999999999999963210 000 001123
Q ss_pred hHHHHHHHHhc-CCCeEEec------CCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHH
Q 011706 324 ALNRFCVQAAV-GHPLTVYG------KGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKA 395 (479)
Q Consensus 324 ~~~~~~~~~~~-~~~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~ 395 (479)
++..++..... +.++.+++ ++++.++|+|++|+|++++.+++++...+...+||+++ +.+|+.|+++.+.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~ 270 (330)
T 2c20_A 191 LIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREV 270 (330)
T ss_dssp HHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHH
Confidence 44455444443 34677776 67788999999999999999998653322234999998 679999999999998
Q ss_pred hhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccc-cHHHHHHHHHHHHHHhcccC
Q 011706 396 GEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHI-LSDSLLDSLLNFAIQFKDRV 456 (479)
Q Consensus 396 ~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~~~~~~~~~~ 456 (479)
+|.++++...+.... ....+.+|++|+++ |||+|++ +++++++++++|++...+.+
T Consensus 271 ---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~~~~ 328 (330)
T 2c20_A 271 ---TNHEIPAEVAPRRAG--DPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGY 328 (330)
T ss_dssp ---TTSCCCEEEECCCSS--CCSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHCSSCC
T ss_pred ---hCCCCceeeCCCCCC--cccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHhhhcc
Confidence 888777666554322 23356789999986 9999999 99999999999998766543
No 14
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.4e-44 Score=360.34 Aligned_cols=319 Identities=18% Similarity=0.186 Sum_probs=247.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+++|+|||||||||||++|+++|+++ |++|++++|....... + ....+++++.+|+
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------------------~--~~~~~v~~~~~Dl 78 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGD--------------------L--VKHERMHFFEGDI 78 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGG--------------------G--GGSTTEEEEECCT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhh--------------------h--ccCCCeEEEeCcc
Confidence 456889999999999999999999998 9999999986432110 0 0125899999999
Q ss_pred C-ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-
Q 011706 162 C-DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI- 239 (479)
Q Consensus 162 ~-d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~- 239 (479)
+ |.+.+.++++ ++|+|||+||.........++ ...+++|+.|+.+++++|++.+ + +|||+||.++||....
T Consensus 79 ~~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~-~-~~v~~SS~~vyg~~~~~ 151 (372)
T 3slg_A 79 TINKEWVEYHVK--KCDVILPLVAIATPATYVKQP---LRVFELDFEANLPIVRSAVKYG-K-HLVFPSTSEVYGMCADE 151 (372)
T ss_dssp TTCHHHHHHHHH--HCSEEEECBCCCCHHHHHHCH---HHHHHHHTTTTHHHHHHHHHHT-C-EEEEECCGGGGBSCCCS
T ss_pred CCCHHHHHHHhc--cCCEEEEcCccccHHHHhhCH---HHHHHHHHHHHHHHHHHHHHhC-C-cEEEeCcHHHhCCCCCC
Confidence 9 9999999998 799999999976644333333 4577999999999999999998 5 9999999999998654
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDG 319 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g 319 (479)
++.|+..+.... ....|.+.|+.+|+++|++++.++++ |++++++||++||||+.++. .++.+
T Consensus 152 ~~~e~~~~~~~~-------p~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~---------~~~~~ 214 (372)
T 3slg_A 152 QFDPDASALTYG-------PINKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSI---------YTPKE 214 (372)
T ss_dssp SBCTTTCCEEEC-------CTTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCT---------TCSBS
T ss_pred CCCccccccccC-------CCCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccc---------ccccc
Confidence 555653221110 11246789999999999999999887 99999999999999986531 01111
Q ss_pred cccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--CCCCceEEEeCC-C-CcCHHHHHHHHHHH
Q 011706 320 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--QPGEFRVFNQFT-E-QFSVNQLAALVTKA 395 (479)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~ni~~-~-~~s~~el~~~i~~~ 395 (479)
....++..++..+..++++.+++++++.++|+|++|+|++++.+++++. ..++ +||+++ + .+|+.|+++.+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~--~~ni~~~~~~~s~~e~~~~i~~~ 292 (372)
T 3slg_A 215 GSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGK--IYNIGNPNNNFSVRELANKMLEL 292 (372)
T ss_dssp CSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTE--EEEECCTTCEEEHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCc--eEEeCCCCCCccHHHHHHHHHHH
Confidence 2244678889999999999999988999999999999999999999875 3444 999999 5 79999999999998
Q ss_pred hhhcCCcceeeecCCCC-------------cccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHh
Q 011706 396 GEKLGLDVKTISVPNPR-------------VEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 396 ~~~~g~~~~~~~~~~~~-------------~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
+|.++++...+... .........+|++|+++ |||+|+++++++++++++|++..
T Consensus 293 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 293 ---AAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp ---HHHCTTTHHHHHTCCEEEC-------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred ---hCCCcccccccccceeeeccccccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 55443322211100 01233455689999987 99999999999999999998653
No 15
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=344.22 Aligned_cols=306 Identities=16% Similarity=0.124 Sum_probs=242.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+|||||||||||++|+++|+++|+ +... ....++.+.+|++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~----------------------------~~~~~~~~~~D~~ 48 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE----------------------------DWVFVSSKDADLT 48 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC----------------------------EEEECCTTTCCTT
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc----------------------------cccccCceecccC
Confidence 35689999999999999999999999998 1000 0024555679999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CC
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DI 241 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~ 241 (479)
|++++.++++..++|+|||+|+...... ....++...+++|+.|+.+++++|++.+++ +|||+||.++||.... ++
T Consensus 49 d~~~~~~~~~~~~~d~Vih~A~~~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~~v~~SS~~vyg~~~~~~~ 125 (319)
T 4b8w_A 49 DTAQTRALFEKVQPTHVIHLAAMVGGLF--RNIKYNLDFWRKNVHMNDNVLHSAFEVGAR-KVVSCLSTCIFPDKTTYPI 125 (319)
T ss_dssp SHHHHHHHHHHSCCSEEEECCCCCCCHH--HHTTCHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEECCGGGSCSSCCSSB
T ss_pred CHHHHHHHHhhcCCCEEEECceeccccc--ccccCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEcchhhcCCCCCCCc
Confidence 9999999999667999999999754211 112233567899999999999999999987 9999999999997654 66
Q ss_pred cCCceeecCCCCCCCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCc
Q 011706 242 EEGYITINHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320 (479)
Q Consensus 242 ~e~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~ 320 (479)
.|+.... .+..|.+ .|+.+|+++|++++.+++++|++++++||++||||+..+.. .
T Consensus 126 ~E~~~~~----------~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~-------------~ 182 (319)
T 4b8w_A 126 DETMIHN----------GPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNI-------------E 182 (319)
T ss_dssp CGGGGGB----------SCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCT-------------T
T ss_pred ccccccc----------CCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCC-------------c
Confidence 6653110 1233444 69999999999999999999999999999999999875321 1
Q ss_pred ccchHHHHHHH----HhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHH
Q 011706 321 FGTALNRFCVQ----AAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKA 395 (479)
Q Consensus 321 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~ 395 (479)
.+.++..++.. +..++++.+++++++.++|+|++|+|++++.+++++... ...+||+++ +.+|+.|+++.+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~ 261 (319)
T 4b8w_A 183 DGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEV-EPIILSVGEEDEVSIKEAAEAVVEA 261 (319)
T ss_dssp TSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCS-SCEEECCCGGGCEEHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccC-CceEEEecCCCceeHHHHHHHHHHH
Confidence 12344555555 788999999999999999999999999999999875432 225999998 789999999999998
Q ss_pred hhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 396 GEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 396 ~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+|.+.++...+.... ....+.+|++|+++ |||+|.++++++++++++|++...+
T Consensus 262 ---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 316 (319)
T 4b8w_A 262 ---MDFHGEVTFDTTKSD--GQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYE 316 (319)
T ss_dssp ---TTCCSCEEEETTSCC--CCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSCS
T ss_pred ---hCCCCcEEeCCCCCc--CcccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 888887777664322 23345699999988 9999999999999999999987654
No 16
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=100.00 E-value=1.1e-42 Score=345.05 Aligned_cols=329 Identities=25% Similarity=0.305 Sum_probs=246.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++|+++|+++|++|++++|..+...+.. ...+.++.+....+.++.++.+|++|.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~----------~~~~~~~~l~~~~~~~~~~~~~D~~~~~ 71 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGG----------SLPESLRRVQELTGRSVEFEEMDILDQG 71 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSS----------SSBHHHHHHHHHHTCCCEEEECCTTCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCccccccc----------ccHHHHHHHHhccCCceEEEECCCCCHH
Confidence 579999999999999999999999999999988543200000 0001111221112357899999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~ 244 (479)
++.++++..++|+|||+||......... ++..++++|+.|+.+++++|++.+++ +|||+||.++||.... ++.|+
T Consensus 72 ~~~~~~~~~~~d~vih~A~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~~~g~~~~~~~~E~ 147 (348)
T 1ek6_A 72 ALQRLFKKYSFMAVIHFAGLKAVGESVQ---KPLDYYRVNLTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQYLPLDEA 147 (348)
T ss_dssp HHHHHHHHCCEEEEEECCSCCCHHHHHH---CHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGGCSCSSSSBCTT
T ss_pred HHHHHHHhcCCCEEEECCCCcCccchhh---chHHHHHHHHHHHHHHHHHHHHhCCC-EEEEECcHHHhCCCCCCCcCCC
Confidence 9999998667999999999754332222 33567899999999999999998877 9999999999987543 55554
Q ss_pred ceeecCCCCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHHhC--CceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 245 YITINHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
.+..| .+.|+.+|+++|.+++.++++ + ++++++||++||||+.... -.....+..
T Consensus 148 --------------~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~-------~g~~~~~~~ 205 (348)
T 1ek6_A 148 --------------HPTGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGC-------IGEDPQGIP 205 (348)
T ss_dssp --------------SCCCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSS-------CCCCCSSSC
T ss_pred --------------CCCCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccc-------cCcCcccch
Confidence 23344 789999999999999999887 5 9999999999999953110 000001111
Q ss_pred cchHHHHHHHHh-cCCCeEEec------CCCceeccccHHHHHHHHHHHHhCCC-CCCCceEEEeCC-CCcCHHHHHHHH
Q 011706 322 GTALNRFCVQAA-VGHPLTVYG------KGGQTRGYLDIRDTVQCVELAIANPA-QPGEFRVFNQFT-EQFSVNQLAALV 392 (479)
Q Consensus 322 ~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~~~ni~~-~~~s~~el~~~i 392 (479)
..++..++..+. .+.++.+++ ++++.++|+|++|+|++++.+++++. ..+ .++||+++ +.+|+.|+++.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g-~~~~ni~~~~~~s~~e~~~~i 284 (348)
T 1ek6_A 206 NNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCG-CRIYNLGTGTGYSVLQMVQAM 284 (348)
T ss_dssp CSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCC-EEEEEECCSCCEEHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCC-ceEEEeCCCCCccHHHHHHHH
Confidence 335555665555 566788876 57788999999999999999998653 223 14999998 679999999999
Q ss_pred HHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcccC
Q 011706 393 TKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDRV 456 (479)
Q Consensus 393 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
.+. +|.++++...+.... ....+.+|++|+++ |||+|+++++++++++++|++...+.+
T Consensus 285 ~~~---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~~~ 344 (348)
T 1ek6_A 285 EKA---SGKKIPYKVVARREG--DVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344 (348)
T ss_dssp HHH---HCSCCCEEEECCCTT--CCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTTCS
T ss_pred HHH---hCCCCceeeCCCCCc--cchhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhccccc
Confidence 998 787777666554322 23356689999977 999999999999999999998765543
No 17
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=100.00 E-value=3.4e-43 Score=350.63 Aligned_cols=315 Identities=19% Similarity=0.200 Sum_probs=246.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHh--CCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSN--KGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~--~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
.+++|+||||||+||||++|+++|++ .|++|++++|............. .........+.++.++.+|
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~D 76 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPS----------SLGHFKNLIGFKGEVIAAD 76 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CC----------CCCCGGGGTTCCSEEEECC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchh----------hhhhhhhccccCceEEECC
Confidence 45789999999999999999999999 99999999986541110000000 0111122234578999999
Q ss_pred cCChHHHHHH-hhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC
Q 011706 161 ICDFEFLSES-FKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 161 l~d~~~~~~~-~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~ 239 (479)
++|+++++++ .. ++|+||||||.... ...++...+++|+.|+.+++++|++.++ +|||+||.++||....
T Consensus 77 l~d~~~~~~~~~~--~~D~vih~A~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--~~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 77 INNPLDLRRLEKL--HFDYLFHQAAVSDT-----TMLNQELVMKTNYQAFLNLLEIARSKKA--KVIYASSAGVYGNTKA 147 (362)
T ss_dssp TTCHHHHHHHTTS--CCSEEEECCCCCGG-----GCCCHHHHHHHHTHHHHHHHHHHHHTTC--EEEEEEEGGGGCSCCS
T ss_pred CCCHHHHHHhhcc--CCCEEEECCccCCc-----cccCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEeCcHHHhCCCCC
Confidence 9999999998 55 89999999996442 2233467889999999999999999874 5999999999998776
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDG 319 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g 319 (479)
+..|+ .+..|.+.|+.+|+++|.+++.++.+ ++++++||++||||+..+. +
T Consensus 148 ~~~E~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~-------------~ 198 (362)
T 3sxp_A 148 PNVVG--------------KNESPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYK-------------E 198 (362)
T ss_dssp SBCTT--------------SCCCCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGG-------------G
T ss_pred CCCCC--------------CCCCCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCC-------------C
Confidence 66665 35577899999999999999887765 8999999999999987542 1
Q ss_pred cccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhh
Q 011706 320 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEK 398 (479)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~ 398 (479)
.+..++..++..+..+.++.+++++.+.++|+|++|+|++++.+++++. .| +|||++ +.+|+.|+++.+.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g---~~~i~~~~~~s~~e~~~~i~~~--- 271 (362)
T 3sxp_A 199 KTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG---VYNVGYSQARSYNEIVSILKEH--- 271 (362)
T ss_dssp GGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE---EEEESCSCEEEHHHHHHHHHHH---
T ss_pred cchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC---EEEeCCCCCccHHHHHHHHHHH---
Confidence 1235678888899999998888888899999999999999999998764 22 999998 679999999999998
Q ss_pred cCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 399 LGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 399 ~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+| +.++...+.+. ........+|++|+++ |||+|+++++++++++++|++...+
T Consensus 272 ~g-~~~~~~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 326 (362)
T 3sxp_A 272 LG-DFKVTYIKNPY-AFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFK 326 (362)
T ss_dssp HC-CCEEECCC--------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC--
T ss_pred cC-CCceEECCCCC-cCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 78 66766665441 2334456799999966 9999999999999999999875433
No 18
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=100.00 E-value=8.8e-43 Score=345.32 Aligned_cols=326 Identities=22% Similarity=0.320 Sum_probs=244.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
||+|||||||||||++|+++|+++|++|++++|..+... ......+.. ..++.++.+|++|++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~~~l~~--~~~~~~~~~Dl~d~~ 63 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA---------------TDNLHWLSS--LGNFEFVHGDIRNKN 63 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH---------------HHHHHHHHT--TCCCEEEECCTTCHH
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc---------------hhhhhhhcc--CCceEEEEcCCCCHH
Confidence 478999999999999999999999999999997532110 011111111 136889999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~ 244 (479)
+++++++..++|+||||||......... ++..++++|+.|+.+++++|++.+++.+|||+||.++||.... +..|+
T Consensus 64 ~~~~~~~~~~~d~vih~A~~~~~~~~~~---~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~ 140 (347)
T 1orr_A 64 DVTRLITKYMPDSCFHLAGQVAMTTSID---NPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNET 140 (347)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEEC
T ss_pred HHHHHHhccCCCEEEECCcccChhhhhh---CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccc
Confidence 9999998545999999999754322222 3456789999999999999999886448999999999987543 32222
Q ss_pred --ceeecCC--CCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCc
Q 011706 245 --YITINHN--GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320 (479)
Q Consensus 245 --~~~~~~~--~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~ 320 (479)
.+..... ..++. .+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+..+..
T Consensus 141 ~~~~~~~~~~~~~~e~--~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~-------------- 204 (347)
T 1orr_A 141 ETRYTCVDKPNGYDES--TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY-------------- 204 (347)
T ss_dssp SSCEEETTCTTCBCTT--SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT--------------
T ss_pred cccccccccccCcccc--CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCC--------------
Confidence 1110000 01111 234568899999999999999999889999999999999999764310
Q ss_pred ccchHHHHHHHHhcCC-----CeEEecCCCceeccccHHHHHHHHHHHHhC-CCCCCCceEEEeCCC---CcCHHHHHHH
Q 011706 321 FGTALNRFCVQAAVGH-----PLTVYGKGGQTRGYLDIRDTVQCVELAIAN-PAQPGEFRVFNQFTE---QFSVNQLAAL 391 (479)
Q Consensus 321 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~-~~~~g~~~~~ni~~~---~~s~~el~~~ 391 (479)
....+..++..+..+. ++.+++++++.++|+|++|+|++++.++++ ....|+ +||++++ .+|+.|+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~--~~~v~~~~~~~~s~~e~~~~ 282 (347)
T 1orr_A 205 DQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGN--AFNIGGTIVNSLSLLELFKL 282 (347)
T ss_dssp TBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTC--EEEESSCGGGEEEHHHHHHH
T ss_pred cCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCC--EEEeCCCCCCCccHHHHHHH
Confidence 0124556666666665 788889999999999999999999999985 223455 9999985 3999999999
Q ss_pred HHHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 392 VTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 392 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+.+. +|.+.++...+... .....+.+|++|+++ |||+|+++++++++++++|++....
T Consensus 283 i~~~---~g~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 283 LEDY---CNIDMRFTNLPVRE--SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp HHHH---HTCCCCEEEECCCS--SCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred HHHH---hCCCCCceeCCCCC--CCcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence 9998 88777776666322 223456789999976 9999999999999999999987554
No 19
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=100.00 E-value=2.1e-42 Score=341.08 Aligned_cols=314 Identities=18% Similarity=0.139 Sum_probs=242.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+|+|||||||||||++|+++|+++|++|++++|....... ..+..+. ...++.++.+|++|.
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~~~~--~~~~~~~~~~Dl~d~ 75 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR---------------WRLRELG--IEGDIQYEDGDMADA 75 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC---------------HHHHHTT--CGGGEEEEECCTTCH
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc---------------cchhhcc--ccCceEEEECCCCCH
Confidence 57899999999999999999999999999999986432100 0111110 124788999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEeeccccccCCCC-CCc
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKLGTMGEYGTPNI-DIE 242 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~SS~~v~g~~~~-~~~ 242 (479)
+++.++++..++|+|||+||......... ++...+++|+.|+.+++++|++.++ + +|||+||.++||.... ++.
T Consensus 76 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~---~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~v~~SS~~v~g~~~~~~~~ 151 (335)
T 1rpn_A 76 CSVQRAVIKAQPQEVYNLAAQSFVGASWN---QPVTTGVVDGLGVTHLLEAIRQFSPET-RFYQASTSEMFGLIQAERQD 151 (335)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTT---SHHHHHHHHTHHHHHHHHHHHHHCTTS-EEEEEEEGGGGCSCSSSSBC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhhhh---ChHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEEeCHHHhCCCCCCCCC
Confidence 99999998667899999999754322222 3456789999999999999999886 5 9999999999997654 555
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+ .+..|.+.|+.+|+++|.+++.++++++++++++||+++|||+..... ..
T Consensus 152 E~--------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~--------------~~ 203 (335)
T 1rpn_A 152 EN--------------TPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEF--------------VT 203 (335)
T ss_dssp TT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS--------------HH
T ss_pred cc--------------cCCCCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCc--------------ch
Confidence 54 345667899999999999999999889999999999999999754211 12
Q ss_pred chHHHHHHHHhcCC-CeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 323 TALNRFCVQAAVGH-PLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
..+..++..+..++ +...++++++.++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+. +|
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--~~--~~ni~~~~~~s~~e~~~~i~~~---~g 276 (335)
T 1rpn_A 204 RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD--DYVVATGVTTTVRDMCQIAFEH---VG 276 (335)
T ss_dssp HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC--CEEECCSCEEEHHHHHHHHHHT---TT
T ss_pred HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--CC--EEEEeCCCCccHHHHHHHHHHH---hC
Confidence 23556677777776 44557888899999999999999999999764 23 899998 579999999999998 77
Q ss_pred Ccce--eeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 401 LDVK--TISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 401 ~~~~--~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
.+.+ +...+..........+.+|++|+++ |||+|+++++++++++++|++....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 333 (335)
T 1rpn_A 277 LDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVS 333 (335)
T ss_dssp CCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhc
Confidence 6532 1111111112223445689999987 9999999999999999999876543
No 20
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=100.00 E-value=3.6e-42 Score=339.87 Aligned_cols=323 Identities=23% Similarity=0.267 Sum_probs=239.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+||||||+||||++++++|+++|++|+++++..+... +....+....+.++.++.+|++|+++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~Dl~~~~~ 64 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR----------------SVLPVIERLGGKHPTFVEGDIRNEAL 64 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT----------------THHHHHHHHHTSCCEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcch----------------hHHHHHHhhcCCcceEEEccCCCHHH
Confidence 47999999999999999999999999999987433110 01111111113467889999999999
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCCc
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEGY 245 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~~ 245 (479)
+.++++..++|+||||||.........+ ....+++|+.|+.++++++++.+++ +|||+||.++||.... ++.|+
T Consensus 65 ~~~~~~~~~~D~vih~A~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~~~g~~~~~~~~e~- 139 (338)
T 1udb_A 65 MTEILHDHAIDTVIHFAGLKAVGESVQK---PLEYYDNNVNGTLRLISAMRAANVK-NFIFSSSATVYGDNPKIPYVES- 139 (338)
T ss_dssp HHHHHHHTTCSEEEECCSCCCHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCSCCSSSBCTT-
T ss_pred HHHHhhccCCCEEEECCccCccccchhc---HHHHHHHHHHHHHHHHHHHHhcCCC-eEEEEccHHHhCCCCCCCcCcc-
Confidence 9999986579999999997543322222 3457899999999999999998887 9999999999986543 44443
Q ss_pred eeecCCCCCCCCCCCCC-CCchhhhhhHHHHHHHHHHHHHh-CCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 246 ITINHNGRTDTLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
.+.. +.+.|+.||+++|.+++.++.++ +++++++||+++|||..... -...+.+....
T Consensus 140 -------------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~g~~~~~~~~~ 199 (338)
T 1udb_A 140 -------------FPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGD-------MGEDPQGIPNN 199 (338)
T ss_dssp -------------SCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSS-------SCCCCCSSCCS
T ss_pred -------------cCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccc-------cccccccchhh
Confidence 1222 37899999999999999998887 89999999999999953110 00011111233
Q ss_pred hHHHHHHHHh-cCCCeEEec------CCCceeccccHHHHHHHHHHHHhCCC-CCCCceEEEeCC-CCcCHHHHHHHHHH
Q 011706 324 ALNRFCVQAA-VGHPLTVYG------KGGQTRGYLDIRDTVQCVELAIANPA-QPGEFRVFNQFT-EQFSVNQLAALVTK 394 (479)
Q Consensus 324 ~~~~~~~~~~-~~~~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~~~ni~~-~~~s~~el~~~i~~ 394 (479)
++..++.... .+.++.+++ ++.+.++|+|++|+|++++.+++++. ..+ ..+||+++ +++|+.|+++.+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~-~~~yni~~~~~~s~~e~~~~i~~ 278 (338)
T 1udb_A 200 LMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPG-VHIYNLGAGVGNSVLDVVNAFSK 278 (338)
T ss_dssp HHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCE-EEEEEESCSCCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCC-CcEEEecCCCceeHHHHHHHHHH
Confidence 4444444444 345666665 46788999999999999999997632 222 14999998 67999999999999
Q ss_pred HhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcccC
Q 011706 395 AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDRV 456 (479)
Q Consensus 395 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
. +|.++++...+.... ....+.+|++|+++ |||+|+++++++++++++|++...+.+
T Consensus 279 ~---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~~~ 336 (338)
T 1udb_A 279 A---CGKPVNYHFAPRREG--DLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336 (338)
T ss_dssp H---HTSCCCEEEECCCTT--CCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCTTCS
T ss_pred H---hCCCCcceeCCCCCC--chhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhccccc
Confidence 8 777766665554322 22345689999976 999999999999999999998765443
No 21
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=100.00 E-value=6.2e-42 Score=338.03 Aligned_cols=306 Identities=21% Similarity=0.298 Sum_probs=243.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC---C---CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK---G---YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~---G---~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
|+|||||||||||++|+++|+++ | ++|++++|....... +.+..+. ...++.++.+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~---------------~~~~~~~--~~~~~~~~~~D 63 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR---------------ANLAPVD--ADPRLRFVHGD 63 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG---------------GGGGGGT--TCTTEEEEECC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch---------------hhhhhcc--cCCCeEEEEcC
Confidence 57999999999999999999997 8 999999985421100 0111110 12578999999
Q ss_pred cCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-
Q 011706 161 ICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI- 239 (479)
Q Consensus 161 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~- 239 (479)
++|++++.+++. ++|+||||||......... ++..++++|+.|+.+++++|++.+++ +|||+||.++||....
T Consensus 64 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~---~~~~~~~~Nv~~~~~l~~a~~~~~~~-~~v~~SS~~vyg~~~~~ 137 (337)
T 1r6d_A 64 IRDAGLLARELR--GVDAIVHFAAESHVDRSIA---GASVFTETNVQGTQTLLQCAVDAGVG-RVVHVSTNQVYGSIDSG 137 (337)
T ss_dssp TTCHHHHHHHTT--TCCEEEECCSCCCHHHHHH---CCHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEEEGGGGCCCSSS
T ss_pred CCCHHHHHHHhc--CCCEEEECCCccCchhhhh---CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEecchHHhCCCCCC
Confidence 999999999997 8999999999754322222 34567899999999999999999887 9999999999987532
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDG 319 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g 319 (479)
++.|+ .+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+..+
T Consensus 138 ~~~E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~--------------- 188 (337)
T 1r6d_A 138 SWTES--------------SPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--------------- 188 (337)
T ss_dssp CBCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT---------------
T ss_pred CCCCC--------------CCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC---------------
Confidence 44444 2445688999999999999999998899999999999999998643
Q ss_pred cccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhh
Q 011706 320 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEK 398 (479)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~ 398 (479)
..++..++..+..++++.+++++.+.++|+|++|+|++++.+++++. .|+ +||+++ ..+|+.|+++.+.+.
T Consensus 189 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~--~~~v~~~~~~s~~e~~~~i~~~--- 260 (337)
T 1r6d_A 189 --EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AGE--IYHIGGGLELTNRELTGILLDS--- 260 (337)
T ss_dssp --TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTC--EEEECCCCEEEHHHHHHHHHHH---
T ss_pred --CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-CCC--EEEeCCCCCccHHHHHHHHHHH---
Confidence 23456777888888888888988899999999999999999998653 355 999998 569999999999998
Q ss_pred cCCcce-eeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 399 LGLDVK-TISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 399 ~g~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+|.+.+ +...+.... ....+.+|++|+++ |||+|+++++++++++++|++...+
T Consensus 261 ~g~~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 316 (337)
T 1r6d_A 261 LGADWSSVRKVADRKG--HDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRG 316 (337)
T ss_dssp HTCCGGGEEEECCCTT--CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred hCCCcccceecCCCCC--CcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhchh
Confidence 777643 333332211 22345689999987 9999999999999999999976543
No 22
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=100.00 E-value=4.8e-42 Score=341.63 Aligned_cols=313 Identities=19% Similarity=0.210 Sum_probs=242.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+||||++|+++|+++|++|++++|....... +.. .+. ...++.++.+|++|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~---~~~--~~~~~~~~~~Dl~d 68 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS-------------LFE---TAR--VADGMQSEIGDIRD 68 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC-------------HHH---HTT--TTTTSEEEECCTTC
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccch-------------hhH---hhc--cCCceEEEEccccC
Confidence 357899999999999999999999999999999986432100 000 010 13578999999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCC--C
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNI--D 240 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~--~ 240 (479)
++++.++++..++|+||||||........ .++...+++|+.|+.+++++|++.+ ++ +|||+||.++||.... +
T Consensus 69 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~~v~~SS~~vyg~~~~~~~ 144 (357)
T 1rkx_A 69 QNKLLESIREFQPEIVFHMAAQPLVRLSY---SEPVETYSTNVMGTVYLLEAIRHVGGVK-AVVNITSDKCYDNKEWIWG 144 (357)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHH---HCHHHHHHHHTHHHHHHHHHHHHHCCCC-EEEEECCGGGBCCCCSSSC
T ss_pred HHHHHHHHHhcCCCEEEECCCCcccccch---hCHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEecCHHHhCCCCcCCC
Confidence 99999999865699999999963322222 2345678999999999999999887 56 9999999999997653 3
Q ss_pred CcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---------CCceEEeecCeeecCCCCchhhhHhh
Q 011706 241 IEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---------GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 241 ~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---------gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
..|+ .+..+.+.|+.+|+++|.+++.++.++ |++++++||++||||++.+.
T Consensus 145 ~~E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~------ 204 (357)
T 1rkx_A 145 YREN--------------EAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL------ 204 (357)
T ss_dssp BCTT--------------SCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS------
T ss_pred CCCC--------------CCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc------
Confidence 4443 244567899999999999999998765 99999999999999975321
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhC----CCCCCCceEEEeCC---CCcC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIAN----PAQPGEFRVFNQFT---EQFS 384 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~----~~~~g~~~~~ni~~---~~~s 384 (479)
..++..++..+..+.++.+. ++.+.++|+|++|+|++++.++++ +...++ +||+++ +.+|
T Consensus 205 ----------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~--~~ni~~~~~~~~s 271 (357)
T 1rkx_A 205 ----------DRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAE--GWNFGPNDADATP 271 (357)
T ss_dssp ----------SCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCS--EEECCCCGGGCEE
T ss_pred ----------ccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCc--eEEECCCCCCccc
Confidence 23567788888888887664 567889999999999999999874 223344 999996 3699
Q ss_pred HHHHHHHHHHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhccc
Q 011706 385 VNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDR 455 (479)
Q Consensus 385 ~~el~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~ 455 (479)
+.|+++.+.+. +|.+.++...+... ......+.+|++|+++ |||+|+++++++++++++|++.+...
T Consensus 272 ~~e~~~~i~~~---~g~~~~~~~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 339 (357)
T 1rkx_A 272 VKNIVEQMVKY---WGEGASWQLDGNAH-PHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSG 339 (357)
T ss_dssp HHHHHHHHHHH---HCTTCCEEC--------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH---hCCCCccccCCCCC-CcCcccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 99999999998 77766654433211 2223456799999987 99999999999999999999875543
No 23
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=100.00 E-value=8.7e-42 Score=342.58 Aligned_cols=308 Identities=18% Similarity=0.146 Sum_probs=246.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.++|+|||||||||||++|+++|+++|++|++++|....... ....++.++.+|++|
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------------------~~~~~v~~~~~Dl~d 83 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-----------------------EDMFCDEFHLVDLRV 83 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-----------------------GGGTCSEEEECCTTS
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh-----------------------hccCCceEEECCCCC
Confidence 357899999999999999999999999999999986432100 011468899999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC----
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI---- 239 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~---- 239 (479)
.+++.++++ ++|+|||+||....... ...++..++++|+.|+.+++++|++.+++ +|||+||.++|+....
T Consensus 84 ~~~~~~~~~--~~d~Vih~A~~~~~~~~--~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~~V~~SS~~v~~~~~~~~~~ 158 (379)
T 2c5a_A 84 MENCLKVTE--GVDHVFNLAADMGGMGF--IQSNHSVIMYNNTMISFNMIEAARINGIK-RFFYASSACIYPEFKQLETT 158 (379)
T ss_dssp HHHHHHHHT--TCSEEEECCCCCCCHHH--HTTCHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEEEEGGGSCGGGSSSSS
T ss_pred HHHHHHHhC--CCCEEEECceecCcccc--cccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEeehheeCCCCCCCcc
Confidence 999999998 89999999997542211 12234667899999999999999999887 9999999999986432
Q ss_pred --CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCC
Q 011706 240 --DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDY 317 (479)
Q Consensus 240 --~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~ 317 (479)
++.|+. +.+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+.....
T Consensus 159 ~~~~~E~~------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~----------- 215 (379)
T 2c5a_A 159 NVSLKESD------------AWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKG----------- 215 (379)
T ss_dssp SCEECGGG------------GSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSS-----------
T ss_pred CCCcCccc------------CCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCccc-----------
Confidence 223321 1134567899999999999999999888999999999999999764310
Q ss_pred CCcccchHHHHHHHHhcCCC-eEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHH
Q 011706 318 DGVFGTALNRFCVQAAVGHP-LTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKA 395 (479)
Q Consensus 318 ~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~ 395 (479)
-...++..++..+..+.+ +.+++++.+.++|+|++|+|++++.+++++ .++ +||+++ +.+|+.|+++.+.+.
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~--~~ni~~~~~~s~~e~~~~i~~~ 289 (379)
T 2c5a_A 216 --GREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FRE--PVNIGSDEMVSMNEMAEMVLSF 289 (379)
T ss_dssp --SCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--CCS--CEEECCCCCEEHHHHHHHHHHT
T ss_pred --ccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc--CCC--eEEeCCCCccCHHHHHHHHHHH
Confidence 001256677888877876 888898889999999999999999999876 344 899998 679999999999998
Q ss_pred hhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 396 GEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 396 ~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+|.+.++...+.+.. .....+|++|+++ |||+|+++++++++++++|++....
T Consensus 290 ---~g~~~~~~~~p~~~~---~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 343 (379)
T 2c5a_A 290 ---EEKKLPIHHIPGPEG---VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIE 343 (379)
T ss_dssp ---TTCCCCEEEECCCCC---CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---hCCCCceeeCCCCCC---cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhHh
Confidence 888777766665321 2334689999987 9999999999999999999876443
No 24
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=100.00 E-value=9.3e-42 Score=338.25 Aligned_cols=305 Identities=21% Similarity=0.288 Sum_probs=241.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+|+||||||+||||++|+++|+++ |++|++++|....... + .+..+...++.++.+|++|
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------------~---~~~~~~~~~~~~~~~Dl~d 65 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK---------------A---NLEAILGDRVELVVGDIAD 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG---------------G---GTGGGCSSSEEEEECCTTC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh---------------h---HHhhhccCCeEEEECCCCC
Confidence 579999999999999999999999 8999999985421100 0 1111123578999999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC-----
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN----- 238 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~----- 238 (479)
++++.++++ ++|+||||||......... ++...+++|+.|+.+++++|.+.++ +|||+||.++||...
T Consensus 66 ~~~~~~~~~--~~d~vih~A~~~~~~~~~~---~~~~~~~~Nv~g~~~l~~a~~~~~~--~~v~~SS~~vyg~~~~~~~~ 138 (348)
T 1oc2_A 66 AELVDKLAA--KADAIVHYAAESHNDNSLN---DPSPFIHTNFIGTYTLLEAARKYDI--RFHHVSTDEVYGDLPLREDL 138 (348)
T ss_dssp HHHHHHHHT--TCSEEEECCSCCCHHHHHH---CCHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGGCCBCCGGGS
T ss_pred HHHHHHHhh--cCCEEEECCcccCccchhh---CHHHHHHHHHHHHHHHHHHHHHhCC--eEEEecccceeCCCcccccc
Confidence 999999998 7899999999754322222 3456789999999999999999873 999999999998642
Q ss_pred --------CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHh
Q 011706 239 --------IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 239 --------~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
.++.|+ .+..+.+.|+.+|+++|.+++.++.++|++++++||++||||+..+
T Consensus 139 ~~~~~~~~~~~~E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~------ 198 (348)
T 1oc2_A 139 PGHGEGPGEKFTAE--------------TNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI------ 198 (348)
T ss_dssp TTTTCSTTSSBCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT------
T ss_pred cccccccCCCcCCC--------------CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc------
Confidence 223332 2445678999999999999999998899999999999999998643
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHH
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLA 389 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~ 389 (479)
..++..++..+..+.++.+++++.+.++|+|++|+|++++.+++++. .|+ +||+++ ..+|+.|++
T Consensus 199 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~--~~~i~~~~~~s~~e~~ 264 (348)
T 1oc2_A 199 -----------EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR-MGE--TYLIGADGEKNNKEVL 264 (348)
T ss_dssp -----------TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC-TTC--EEEECCSCEEEHHHHH
T ss_pred -----------cchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCC-CCC--eEEeCCCCCCCHHHHH
Confidence 13456777788888888888888899999999999999999998653 455 999998 579999999
Q ss_pred HHHHHHhhhcCCcce-eeecCCCCcccccccccCCchHHHH-cCCccccc-HHHHHHHHHHHHHHhcc
Q 011706 390 ALVTKAGEKLGLDVK-TISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHIL-SDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 390 ~~i~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~-~~~~~~~~~~~~~~~~~ 454 (479)
+.+.+. +|.+.+ +...+... .....+.+|++|+++ |||+|+++ ++++++++++|++....
T Consensus 265 ~~i~~~---~g~~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~ 327 (348)
T 1oc2_A 265 ELILEK---MGQPKDAYDHVTDRA--GHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQD 327 (348)
T ss_dssp HHHHHH---TTCCTTCSEEECCCT--TCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTHH
T ss_pred HHHHHH---hCCCccccccCCCCC--CcccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHhhh
Confidence 999998 776543 33322221 122345689999987 99999997 99999999999986543
No 25
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=100.00 E-value=6.8e-42 Score=345.42 Aligned_cols=335 Identities=23% Similarity=0.290 Sum_probs=243.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHH-hCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCc---eeEEEcc
Q 011706 86 AKRVMIIGGDGYCGWATALHLS-NKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKN---IELYIGD 160 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll-~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---v~~v~~D 160 (479)
+|+||||||+||||++|+++|+ ++|++|++++|........ ........+.+.++.+... ...+ +.++.+|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKS----DHVETRENVARKLQQSDGPKPPWADRYAALEVGD 77 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCC----TTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccc----cccchHHHHHHHHHHhhccccccCCceEEEEECC
Confidence 4699999999999999999999 9999999999864321000 0000000111111111100 0124 8899999
Q ss_pred cCChHHHHHHhhhcC-CCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC-
Q 011706 161 ICDFEFLSESFKSFE-PDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN- 238 (479)
Q Consensus 161 l~d~~~~~~~~~~~~-~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~- 238 (479)
++|++++.++++..+ +|+||||||........ .++..++++|+.|+.+++++|++.+++ +|||+||.++||...
T Consensus 78 l~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~---~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~iv~~SS~~v~g~~~~ 153 (397)
T 1gy8_A 78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESV---RDPLKYYDNNVVGILRLLQAMLLHKCD-KIIFSSSAAIFGNPTM 153 (397)
T ss_dssp TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHH---HCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGTBSCCC
T ss_pred CCCHHHHHHHHHhcCCCCEEEECCCccCcCcch---hhHHHHHHHHhHHHHHHHHHHHHhCCC-EEEEECCHHHhCCCCc
Confidence 999999999998666 99999999975433222 234567899999999999999998887 999999999998754
Q ss_pred -------CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhh
Q 011706 239 -------IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 239 -------~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
.++.|+ .+..|.+.|+.+|+++|.+++.++.++|++++++||++||||+.....
T Consensus 154 ~~~~~~~~~~~E~--------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~----- 214 (397)
T 1gy8_A 154 GSVSTNAEPIDIN--------------AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDI----- 214 (397)
T ss_dssp -----CCCCBCTT--------------SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSC-----
T ss_pred ccccccccCcCcc--------------CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccc-----
Confidence 234443 244567899999999999999999989999999999999999742100
Q ss_pred hcccCCCCcccchHHHHH----HHHhcCC------------CeEEec------CCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 312 CNRLDYDGVFGTALNRFC----VQAAVGH------------PLTVYG------KGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~----~~~~~~~------------~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
. .... ....++..++ .++..+. ++.+++ ++++.++|+||+|+|++++.+++++..
T Consensus 215 g--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~ 291 (397)
T 1gy8_A 215 G--EHYQ-GSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEK 291 (397)
T ss_dssp S--CCST-TCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHT
T ss_pred c--cccc-chhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccc
Confidence 0 0000 0022344333 2555553 577776 678899999999999999999976432
Q ss_pred CC---Cc---eEEEeCC-CCcCHHHHHHHHHHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccc-cHHH
Q 011706 370 PG---EF---RVFNQFT-EQFSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHI-LSDS 440 (479)
Q Consensus 370 ~g---~~---~~~ni~~-~~~s~~el~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~~ 440 (479)
.+ .. .+||+++ +.+|+.|+++.+.+. +|.++++...+.... ....+.+|++|+++ |||+|++ ++++
T Consensus 292 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lG~~p~~~~l~e 366 (397)
T 1gy8_A 292 LGPNDKSKYFSVFNLGTSRGYSVREVIEVARKT---TGHPIPVRECGRREG--DPAYLVAASDKAREVLGWKPKYDTLEA 366 (397)
T ss_dssp CCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHH---HCCCCCEEEECCCTT--CCSEECBCCHHHHHHTCCCCSCCSHHH
T ss_pred cccccccCCCcEEEeCCCCcccHHHHHHHHHHH---hCCCCCeeeCCCCCC--cccccccCHHHHHHHhCCCCCcCCHHH
Confidence 22 12 4999998 679999999999998 787777666554322 23356789999976 9999999 9999
Q ss_pred HHHHHHHHHHHhccc
Q 011706 441 LLDSLLNFAIQFKDR 455 (479)
Q Consensus 441 ~~~~~~~~~~~~~~~ 455 (479)
+++++++|++..++.
T Consensus 367 ~l~~~~~~~~~~~~~ 381 (397)
T 1gy8_A 367 IMETSWKFQRTHPNG 381 (397)
T ss_dssp HHHHHHHHHHTCTTT
T ss_pred HHHHHHHHHHhcccc
Confidence 999999999875543
No 26
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=100.00 E-value=3.5e-42 Score=345.20 Aligned_cols=309 Identities=20% Similarity=0.232 Sum_probs=239.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+|||||||||||++|+++|+++| ++|++++|....... .+. ...+++++.+|++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------------------~l~--~~~~v~~~~~Dl~ 88 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI-------------------NVP--DHPAVRFSETSIT 88 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG-------------------GSC--CCTTEEEECSCTT
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh-------------------hcc--CCCceEEEECCCC
Confidence 467899999999999999999999999 999999886432100 000 1357899999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc-CCcceEEEeeccccccCCCC-C
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF-RQECHLVKLGTMGEYGTPNI-D 240 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-g~~~~~V~~SS~~v~g~~~~-~ 240 (479)
|++++.++++ ++|+|||+||......... ++...+++|+.|+.+++++|++. +++ +|||+||.++||.... +
T Consensus 89 d~~~l~~~~~--~~d~Vih~A~~~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~V~~SS~~vyg~~~~~~ 162 (377)
T 2q1s_A 89 DDALLASLQD--EYDYVFHLATYHGNQSSIH---DPLADHENNTLTTLKLYERLKHFKRLK-KVVYSAAGCSIAEKTFDD 162 (377)
T ss_dssp CHHHHHHCCS--CCSEEEECCCCSCHHHHHH---CHHHHHHHHTHHHHHHHHHHTTCSSCC-EEEEEEEC----------
T ss_pred CHHHHHHHhh--CCCEEEECCCccCchhhhh---CHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEeCCHHHcCCCCCCC
Confidence 9999999998 8999999999754332222 23567899999999999999998 777 9999999999987543 4
Q ss_pred Cc--CCceeecCCCCCCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCC---------Cchhhh
Q 011706 241 IE--EGYITINHNGRTDTLPYPK-QASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT---------DETAMH 308 (479)
Q Consensus 241 ~~--e~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~---------~~~~~~ 308 (479)
+. |+.+. .+. .+.+.|+.+|+++|.+++.+++++|++++++||++||||+. .+.
T Consensus 163 ~~~~E~~~~-----------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~--- 228 (377)
T 2q1s_A 163 AKATEETDI-----------VSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPA--- 228 (377)
T ss_dssp ----CCCCC-----------CCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGG---
T ss_pred cCccccccc-----------ccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcc---
Confidence 44 44110 133 56789999999999999999988899999999999999976 210
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHH-HHHHHhCCCCCCCceEEEeCC-CCcCHH
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQC-VELAIANPAQPGEFRVFNQFT-EQFSVN 386 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a-~~~~~~~~~~~g~~~~~ni~~-~~~s~~ 386 (479)
+.+..++..++..+..+.++.+++++++.++|+|++|+|++ ++.+++++. . + +||+++ +.+|+.
T Consensus 229 ----------~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-~--g-~~~i~~~~~~s~~ 294 (377)
T 2q1s_A 229 ----------TVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP-G--G-VYNIASGKETSIA 294 (377)
T ss_dssp ----------GTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT-T--E-EEECCCCCCEEHH
T ss_pred ----------cccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC-C--C-eEEecCCCceeHH
Confidence 00123567788888889888888888899999999999999 999998754 2 2 999998 689999
Q ss_pred HHHHHHHHHhhhcCCcceeeecCCCCcccccc-cccCCchHHHH-cCCcccccHHHHHHHHHHHHHHh
Q 011706 387 QLAALVTKAGEKLGLDVKTISVPNPRVEAEEH-YYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 387 el~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
|+++.+.+. +|.+.++...|... .... .+.+|++|+++ |||+|+++++++++++++|++..
T Consensus 295 e~~~~i~~~---~g~~~~~~~~p~~~--~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 295 DLATKINEI---TGNNTELDRLPKRP--WDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp HHHHHHHHH---HTCCSCCCCCCCCG--GGCC-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH---hCCCCCceeCCCCc--cccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999998 78776665555322 2233 56799999976 99999999999999999998764
No 27
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=100.00 E-value=1.3e-41 Score=336.55 Aligned_cols=319 Identities=18% Similarity=0.181 Sum_probs=239.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh-
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF- 164 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~- 164 (479)
|+|||||||||||++|+++|+++ |++|++++|...... .+ ....+++++.+|++|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------------------~~--~~~~~~~~~~~D~~~~~ 58 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS--------------------RF--LNHPHFHFVEGDISIHS 58 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG--------------------GG--TTCTTEEEEECCTTTCS
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHH--------------------Hh--hcCCCeEEEeccccCcH
Confidence 58999999999999999999998 899999998643210 00 0124789999999984
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEE 243 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e 243 (479)
+.++++++ ++|+|||+||.........+ +..++++|+.|+.+++++|++.+ + +|||+||.++||.... ++.|
T Consensus 59 ~~~~~~~~--~~d~vih~A~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~v~g~~~~~~~~e 131 (345)
T 2bll_A 59 EWIEYHVK--KCDVVLPLVAIATPIEYTRN---PLRVFELDFEENLRIIRYCVKYR-K-RIIFPSTSEVYGMCSDKYFDE 131 (345)
T ss_dssp HHHHHHHH--HCSEEEECBCCCCHHHHHHS---HHHHHHHHTHHHHHHHHHHHHTT-C-EEEEECCGGGGBTCCCSSBCT
T ss_pred HHHHhhcc--CCCEEEEcccccCccchhcC---HHHHHHHHHHHHHHHHHHHHHhC-C-eEEEEecHHHcCCCCCCCcCC
Confidence 67888888 79999999997543222222 35578999999999999999988 5 9999999999987653 4555
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+..+... .....+.+.|+.+|+++|.+++.+++++|++++++||++||||+.+.... +......
T Consensus 132 ~~~~~~~-------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~---------~~~~~~~ 195 (345)
T 2bll_A 132 DHSNLIV-------GPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNA---------ARIGSSR 195 (345)
T ss_dssp TTCCCBC-------CCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTC---------SBSCBCH
T ss_pred ccccccc-------CcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccc---------ccccccc
Confidence 4211000 00113567999999999999999998889999999999999998642100 0000023
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--CCCCceEEEeCC-C-CcCHHHHHHHHHHHhhhc
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--QPGEFRVFNQFT-E-QFSVNQLAALVTKAGEKL 399 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~ni~~-~-~~s~~el~~~i~~~~~~~ 399 (479)
++..++..+..++++.+++++.+.++|+|++|+|++++.+++++. ..+ ++||+++ + .+|+.|+++.+.+. +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g--~~~~i~~~~~~~s~~e~~~~i~~~---~ 270 (345)
T 2bll_A 196 AITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG--EIINIGNPENEASIEELGEMLLAS---F 270 (345)
T ss_dssp HHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTT--EEEEECCTTSEEEHHHHHHHHHHH---H
T ss_pred HHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCC--ceEEeCCCCCCCCHHHHHHHHHHH---h
Confidence 467788888899998888888899999999999999999998764 234 4999998 4 69999999999998 5
Q ss_pred CCcceeeecCCCCc-------------ccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhccc
Q 011706 400 GLDVKTISVPNPRV-------------EAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDR 455 (479)
Q Consensus 400 g~~~~~~~~~~~~~-------------~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~ 455 (479)
|.+......+.... ........+|++|+++ |||+|+++++++++++++|++...+.
T Consensus 271 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~ 340 (345)
T 2bll_A 271 EKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 340 (345)
T ss_dssp HTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred CCCcccccCccccccccccchhhccccccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCCC
Confidence 54432222221110 0112345689999987 99999999999999999999875543
No 28
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=100.00 E-value=7.4e-42 Score=335.14 Aligned_cols=299 Identities=16% Similarity=0.135 Sum_probs=236.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|+|||||||||||++|+++|+++|++|+++++.. .+|++|.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------------------~~D~~d~ 44 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------------------ELNLLDS 44 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------------------TCCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------------------cCCccCH
Confidence 367999999999999999999999999999876420 3799999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcc-cccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCc
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAP-YSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIE 242 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~ 242 (479)
+++.++++..++|+|||+||..... ....+ +...+++|+.++.+++++|++.+++ +|||+||.++||.... ++.
T Consensus 45 ~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~vyg~~~~~~~~ 120 (321)
T 1e6u_A 45 RAVHDFFASERIDQVYLAAAKVGGIVANNTY---PADFIYQNMMIESNIIHAAHQNDVN-KLLFLGSSCIYPKLAKQPMA 120 (321)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCCCHHHHHHC---HHHHHHHHHHHHHHHHHHHHHTTCC-EEEEECCGGGSCTTCCSSBC
T ss_pred HHHHHHHHhcCCCEEEEcCeecCCcchhhhC---HHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEccHHHcCCCCCCCcC
Confidence 9999999866899999999975421 11222 3557899999999999999999887 9999999999987543 555
Q ss_pred CCceeecCCCCCCCCCCCCCCC-chhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 243 EGYITINHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
|+.... .+..|. +.|+.+|+++|.+++.+++++|++++++||++||||+..+.. ..
T Consensus 121 E~~~~~----------~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~-------------~~ 177 (321)
T 1e6u_A 121 ESELLQ----------GTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHP-------------SN 177 (321)
T ss_dssp GGGTTS----------SCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCT-------------TC
T ss_pred cccccc----------CCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCC-------------CC
Confidence 542100 022333 699999999999999999888999999999999999864310 01
Q ss_pred cchHHHHHHHHhc----C-CCeEEecCCCceeccccHHHHHHHHHHHHhCCCCC--------CCceEEEeCC-CCcCHHH
Q 011706 322 GTALNRFCVQAAV----G-HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQP--------GEFRVFNQFT-EQFSVNQ 387 (479)
Q Consensus 322 ~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~--------g~~~~~ni~~-~~~s~~e 387 (479)
..++..++..+.. | .++.+++++++.++|+|++|+|++++.+++++... ++ +||+++ +.+|+.|
T Consensus 178 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~--~~ni~~~~~~s~~e 255 (321)
T 1e6u_A 178 SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLS--HINVGTGVDCTIRE 255 (321)
T ss_dssp SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBC--CEEESCSCCEEHHH
T ss_pred CccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCc--eEEeCCCCCccHHH
Confidence 2345566666654 4 57778888899999999999999999999876542 34 999998 6799999
Q ss_pred HHHHHHHHhhhcCCcceeeecCCCCcccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHHhcc
Q 011706 388 LAALVTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 388 l~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+++.+.+. +|.+.++...+... .......+|++|+++|||+|+++++++++++++|++...+
T Consensus 256 ~~~~i~~~---~g~~~~~~~~~~~~--~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 317 (321)
T 1e6u_A 256 LAQTIAKV---VGYKGRVVFDASKP--DGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQD 317 (321)
T ss_dssp HHHHHHHH---HTCCSEEEEETTSC--CCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHH---hCCCCceEeCCCCC--CCcccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHHHH
Confidence 99999998 88777766655432 2234567899999779999999999999999999876543
No 29
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=100.00 E-value=2.5e-41 Score=336.80 Aligned_cols=309 Identities=21% Similarity=0.296 Sum_probs=240.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
|+||||||+||||++|+++|++. |++|++++|....... +.+..+. ...++.++.+|++|.+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---------------~~~~~~~--~~~~~~~~~~Dl~d~~ 63 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL---------------ESLSDIS--ESNRYNFEHADICDSA 63 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG---------------GGGTTTT--TCTTEEEEECCTTCHH
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCch---------------hhhhhhh--cCCCeEEEECCCCCHH
Confidence 47999999999999999999998 7999999985421100 0011110 1357899999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc--CCc------ceEEEeeccccccCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF--RQE------CHLVKLGTMGEYGTP 237 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--g~~------~~~V~~SS~~v~g~~ 237 (479)
++.++++..++|+||||||........ .++..++++|+.|+.+++++|.+. +++ .+|||+||.++||..
T Consensus 64 ~~~~~~~~~~~d~vih~A~~~~~~~~~---~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~ 140 (361)
T 1kew_A 64 EITRIFEQYQPDAVMHLAAESHVDRSI---TGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDL 140 (361)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHH---HCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCC
T ss_pred HHHHHHhhcCCCEEEECCCCcChhhhh---hCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCC
Confidence 999999766899999999975422222 234667899999999999999987 653 399999999999875
Q ss_pred CC-----------CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchh
Q 011706 238 NI-----------DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 238 ~~-----------~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
.. ++.|+ .+..+.+.|+.+|+++|.+++.++.++|++++++||++||||+..+
T Consensus 141 ~~~~~~~~~~~~~~~~E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~-- 204 (361)
T 1kew_A 141 PHPDEVENSVTLPLFTET--------------TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-- 204 (361)
T ss_dssp CCGGGSCTTSCCCCBCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--
T ss_pred cccccccccccCCCCCCC--------------CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc--
Confidence 42 23332 2445688999999999999999999899999999999999998643
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCH
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSV 385 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~ 385 (479)
..++..++..+..++++.+++++.+.++|+|++|+|++++.+++++. .|+ +||+++ ..+|+
T Consensus 205 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~--~~~v~~~~~~s~ 266 (361)
T 1kew_A 205 ---------------EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK-AGE--TYNIGGHNEKKN 266 (361)
T ss_dssp ---------------TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTC--EEEECCCCEEEH
T ss_pred ---------------ccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCC-CCC--EEEecCCCeeeH
Confidence 12456677888888888888988899999999999999999998653 455 999999 56999
Q ss_pred HHHHHHHHHHhhhcCCcce--------eeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 386 NQLAALVTKAGEKLGLDVK--------TISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 386 ~el~~~i~~~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
.|+++.+.+. +|.+.+ +...+... .....+.+|++|+++ |||+|+++++++++++++|++...+
T Consensus 267 ~e~~~~i~~~---~g~~~~~~~p~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 339 (361)
T 1kew_A 267 LDVVFTICDL---LDEIVPKATSYREQITYVADRP--GHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQ 339 (361)
T ss_dssp HHHHHHHHHH---HHHHSCCSSCGGGGEEEECCCT--TCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHH---hCCcCccccccccceeecCCCC--cccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhccc
Confidence 9999999998 443321 11222111 122345689999987 9999999999999999999976543
No 30
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=100.00 E-value=4.1e-42 Score=335.51 Aligned_cols=304 Identities=12% Similarity=0.131 Sum_probs=233.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+|+|||||||||||++|+++|+++ |++|++++|..... + . ..++.++.+|++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----------------~-~-------~~~~~~~~~D~~d 56 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-----------------D-V-------VNSGPFEVVNALD 56 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-----------------H-H-------HHSSCEEECCTTC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-----------------c-c-------cCCCceEEecCCC
Confidence 478999999999999999999999 89999999854310 0 0 0256789999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC--CC
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI--DI 241 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~--~~ 241 (479)
.+++.++++..++|+|||+||..... .. .++...+++|+.|+.+++++|++.+++ +|||+||.++|+.... +.
T Consensus 57 ~~~~~~~~~~~~~d~vih~a~~~~~~-~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~ 131 (312)
T 2yy7_A 57 FNQIEHLVEVHKITDIYLMAALLSAT-AE---KNPAFAWDLNMNSLFHVLNLAKAKKIK-KIFWPSSIAVFGPTTPKENT 131 (312)
T ss_dssp HHHHHHHHHHTTCCEEEECCCCCHHH-HH---HCHHHHHHHHHHHHHHHHHHHHTTSCS-EEECCEEGGGCCTTSCSSSB
T ss_pred HHHHHHHHhhcCCCEEEECCccCCCc-hh---hChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHHhCCCCCCCCc
Confidence 99999999876899999999964321 11 234567899999999999999998887 9999999999987532 33
Q ss_pred cCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 242 EEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 242 ~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
.|+ .+..|.+.|+.+|+++|.+++.+++++|++++++||++||||+..+.. +.
T Consensus 132 ~e~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~------------~~- 184 (312)
T 2yy7_A 132 PQY--------------TIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGG------------GT- 184 (312)
T ss_dssp CSS--------------CBCCCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCS------------CT-
T ss_pred ccc--------------CcCCCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCC------------ch-
Confidence 343 244668899999999999999998888999999999999998654311 00
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCC-CCceEEEeCCCCcCHHHHHHHHHHHhhhcC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQP-GEFRVFNQFTEQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~-g~~~~~ni~~~~~s~~el~~~i~~~~~~~g 400 (479)
...+..++.....++++.+++++++.++|+|++|+|++++.+++++... +..++||++++.+|+.|+++.+.+. +|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~---~~ 261 (312)
T 2yy7_A 185 TDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKH---IP 261 (312)
T ss_dssp TTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTT---CT
T ss_pred hhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHH---CC
Confidence 1122333344455566777788888999999999999999999986541 1013999998779999999999998 66
Q ss_pred CcceeeecCCCCccc-ccccccCCchHHHH-cCCcccccHHHHHHHHHHHHH
Q 011706 401 LDVKTISVPNPRVEA-EEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAI 450 (479)
Q Consensus 401 ~~~~~~~~~~~~~~~-~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~ 450 (479)
..++.+.+..+... ......+|++|+++ |||+|+++++++++++++|++
T Consensus 262 -~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 262 -EFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp -TCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred -CCceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 23444444321111 11234689999987 999999999999999999873
No 31
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=100.00 E-value=7.6e-42 Score=334.76 Aligned_cols=296 Identities=22% Similarity=0.205 Sum_probs=239.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+|||||||||||++|+++|+++|++|++++|........... +..+ ....+++++.+|++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------------~~~~--~~~~~~~~~~~Dl~- 68 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEG-------------TGKF--LEKPVLELEERDLS- 68 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTT-------------SSEE--ECSCGGGCCHHHHT-
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhh-------------hhhh--ccCCCeeEEeCccc-
Confidence 3578999999999999999999999999999999865421000000 0000 11245667777765
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCc
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIE 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~ 242 (479)
++|+|||+||.........++ ...++ |+.++.+++++|++.+++ +|||+||.++||.... ++.
T Consensus 69 -----------~~d~vi~~a~~~~~~~~~~~~---~~~~~-n~~~~~~ll~a~~~~~v~-~~v~~SS~~v~~~~~~~~~~ 132 (321)
T 3vps_A 69 -----------DVRLVYHLASHKSVPRSFKQP---LDYLD-NVDSGRHLLALCTSVGVP-KVVVGSTCEVYGQADTLPTP 132 (321)
T ss_dssp -----------TEEEEEECCCCCCHHHHTTST---TTTHH-HHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCSCSSSSBC
T ss_pred -----------cCCEEEECCccCChHHHHhCH---HHHHH-HHHHHHHHHHHHHHcCCC-eEEEecCHHHhCCCCCCCCC
Confidence 689999999986654444443 34567 999999999999999987 9999999999998654 566
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCC-ceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI-RATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl-~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
|+ .+..|.+.|+.+|+++|.+++.+++++|+ +++++||++||||+..+
T Consensus 133 E~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~----------------- 181 (321)
T 3vps_A 133 ED--------------SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP----------------- 181 (321)
T ss_dssp TT--------------SCCCCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-----------------
T ss_pred CC--------------CCCCCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-----------------
Confidence 65 35567899999999999999999988899 99999999999998654
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
..++..++..+..++++.+++++.+.++|+|++|+|++++.+++++.. | +||+++ +.+|+.|+++.+. . +|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g---~~~i~~~~~~s~~e~~~~i~-~---~g 253 (321)
T 3vps_A 182 DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S---VVNFGSGQSLSVNDVIRILQ-A---TS 253 (321)
T ss_dssp TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S---EEEESCSCCEEHHHHHHHHH-T---TC
T ss_pred CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C---eEEecCCCcccHHHHHHHHH-H---hC
Confidence 235678888888999999999999999999999999999999998755 3 999998 6799999999999 8 89
Q ss_pred CcceeeecCCCCcccccccccCCchHHHH-cCCcc-cccHHHHHHHHHHHHHHh
Q 011706 401 LDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQP-HILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p-~~~~~~~~~~~~~~~~~~ 452 (479)
.+.++...+.... ....+.+|++|+++ |||+| +++++++++++++|++..
T Consensus 254 ~~~~~~~~~~~~~--~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 305 (321)
T 3vps_A 254 PAAEVARKQPRPN--EITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSR 305 (321)
T ss_dssp TTCEEEEECCCTT--CCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTS
T ss_pred CCCccccCCCCCC--CcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhC
Confidence 8888877765432 34456799999988 99999 889999999999999763
No 32
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=100.00 E-value=7.6e-41 Score=335.26 Aligned_cols=319 Identities=19% Similarity=0.176 Sum_probs=240.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+||||||+||||++|+++|+++|++|++++|....... ..+ ..+. .........++.++.+|++|.++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~---~~l~---~~~~~~~~~~~~~~~~Dl~d~~~ 93 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT-----GRI---EHLY---KNPQAHIEGNMKLHYGDLTDSTC 93 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-----TTT---GGGC------------CEEEEECCTTCHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccch-----hhH---HHHh---hhhccccCCCceEEEccCCCHHH
Confidence 789999999999999999999999999999986432100 000 0000 00000012478899999999999
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCC---cceEEEeeccccccCCCC-CCc
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ---ECHLVKLGTMGEYGTPNI-DIE 242 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~---~~~~V~~SS~~v~g~~~~-~~~ 242 (479)
+.++++..++|+||||||......... ++...+++|+.|+.+++++|++.++ + +|||+||.++|+.... ++.
T Consensus 94 ~~~~~~~~~~d~vih~A~~~~~~~~~~---~~~~~~~~N~~g~~~l~~a~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~ 169 (375)
T 1t2a_A 94 LVKIINEVKPTEIYNLGAQSHVKISFD---LAEYTADVDGVGTLRLLDAVKTCGLINSV-KFYQASTSELYGKVQEIPQK 169 (375)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHHH---SHHHHHHHHTHHHHHHHHHHHHTTCTTTC-EEEEEEEGGGTCSCSSSSBC
T ss_pred HHHHHHhcCCCEEEECCCccccccccc---CHHHHHHHHHHHHHHHHHHHHHhCCCccc-eEEEecchhhhCCCCCCCCC
Confidence 999998667899999999754322222 3456789999999999999999886 5 9999999999987543 555
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+ .+..+.+.|+.+|+++|.+++.++.+++++++++||+++|||+..+.. ..
T Consensus 170 E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~--------------~~ 221 (375)
T 1t2a_A 170 ET--------------TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANF--------------VT 221 (375)
T ss_dssp TT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS--------------HH
T ss_pred cc--------------CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCc--------------ch
Confidence 54 244567899999999999999999989999999999999999754221 12
Q ss_pred chHHHHHHHHhcCC-CeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 323 TALNRFCVQAAVGH-PLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
..+..++..+..+. +...++++++.++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+. +|
T Consensus 222 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~--~~ni~~~~~~s~~e~~~~i~~~---~g 294 (375)
T 1t2a_A 222 RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE--PE--DFVIATGEVHSVREFVEKSFLH---IG 294 (375)
T ss_dssp HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS--CC--CEEECCSCCEEHHHHHHHHHHH---TT
T ss_pred HHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC--Cc--eEEEeCCCcccHHHHHHHHHHH---hC
Confidence 23455666667776 44567888899999999999999999998764 23 899998 679999999999998 77
Q ss_pred Ccceee-------------------ecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhccc
Q 011706 401 LDVKTI-------------------SVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDR 455 (479)
Q Consensus 401 ~~~~~~-------------------~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~ 455 (479)
.++++. ..+..........+.+|++|+++ |||+|+++++++++++++|+......
T Consensus 295 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 369 (375)
T 1t2a_A 295 KTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRT 369 (375)
T ss_dssp CCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhhcc
Confidence 765422 10100111122345689999987 99999999999999999999876543
No 33
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=6.1e-41 Score=335.43 Aligned_cols=316 Identities=22% Similarity=0.232 Sum_probs=239.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcc---cCCCceeEEEcccC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS---LTGKNIELYIGDIC 162 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~Dl~ 162 (479)
||+||||||+||||++++++|+++|++|++++|....... +.+..+.. ....++.++.+|++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNT---------------ERVDHIYQDPHTCNPKFHLHYGDLS 65 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------------------CCEEECCCCSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccch---------------HHHHHHhhccccCCCceEEEECCCC
Confidence 5799999999999999999999999999999886432100 00000000 01247889999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCC---cceEEEeeccccccCCCC
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ---ECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~---~~~~V~~SS~~v~g~~~~ 239 (479)
|.+++.++++..++|+||||||........ .++...+++|+.|+.+++++|++.++ + +|||+||.++||....
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~iv~~SS~~v~g~~~~ 141 (372)
T 1db3_A 66 DTSNLTRILREVQPDEVYNLGAMSHVAVSF---ESPEYTADVDAMGTLRLLEAIRFLGLEKKT-RFYQASTSELYGLVQE 141 (372)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCCTTTTTT---SCHHHHHHHHTHHHHHHHHHHHHTTCTTTC-EEEEEEEGGGGTTCCS
T ss_pred CHHHHHHHHHhcCCCEEEECCcccCccccc---cCHHHHHHHHHHHHHHHHHHHHHhCCCCCc-EEEEeCChhhhCCCCC
Confidence 999999999866789999999975533222 23456789999999999999999886 5 9999999999987653
Q ss_pred -CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 240 -DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 240 -~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
++.|+ .+..+.+.|+.+|+++|.+++.++.+++++++++|++++|||+..+..
T Consensus 142 ~~~~E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~------------ 195 (372)
T 1db3_A 142 IPQKET--------------TPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETF------------ 195 (372)
T ss_dssp SSBCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS------------
T ss_pred CCCCcc--------------CCCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcc------------
Confidence 45554 244567899999999999999999999999999999999999754311
Q ss_pred CcccchHHHHHHHHhcCC-CeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHh
Q 011706 319 GVFGTALNRFCVQAAVGH-PLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAG 396 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~ 396 (479)
....+..++..+..|+ +...++++++.++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+.
T Consensus 196 --~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~--~~ni~~~~~~s~~e~~~~i~~~- 268 (372)
T 1db3_A 196 --VTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ--PE--DFVIATGVQYSVRQFVEMAAAQ- 268 (372)
T ss_dssp --HHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS--CC--CEEECCCCCEEHHHHHHHHHHT-
T ss_pred --hhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC--Cc--eEEEcCCCceeHHHHHHHHHHH-
Confidence 1223456666777776 35567888899999999999999999998754 33 899998 579999999999998
Q ss_pred hhcCCcceeee-----------------------------cCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHH
Q 011706 397 EKLGLDVKTIS-----------------------------VPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLL 446 (479)
Q Consensus 397 ~~~g~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~ 446 (479)
+|.++++.. .+..........+.+|++|+++ |||+|+++++|++++++
T Consensus 269 --~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~ 346 (372)
T 1db3_A 269 --LGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMV 346 (372)
T ss_dssp --TTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHH
T ss_pred --hCCCcccccccccccccccccccccccccccccceeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHH
Confidence 776544221 0100011122345689999987 99999999999999999
Q ss_pred HHHHHhccc
Q 011706 447 NFAIQFKDR 455 (479)
Q Consensus 447 ~~~~~~~~~ 455 (479)
+|+......
T Consensus 347 ~~~~~~~~~ 355 (372)
T 1db3_A 347 ANDLEAAKK 355 (372)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHhhhc
Confidence 999876543
No 34
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=100.00 E-value=9.8e-41 Score=330.22 Aligned_cols=315 Identities=18% Similarity=0.192 Sum_probs=239.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|+|||||||||||++|+++|+++|++|++++|....... +.+..+. ...++.++.+|++|.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---------------~~~~~~~--~~~~~~~~~~Dl~d~ 64 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS---------------WRLKELG--IENDVKIIHMDLLEF 64 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT---------------HHHHHTT--CTTTEEECCCCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc---------------ccHhhcc--ccCceeEEECCCCCH
Confidence 47899999999999999999999999999999986432100 0111111 124688999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEE 243 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e 243 (479)
+++.++++..++|+||||||...... ...++...+++|+.|+.+++++|++.+++.+|||+||.++||.... ++.|
T Consensus 65 ~~~~~~~~~~~~d~vih~A~~~~~~~---~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e 141 (345)
T 2z1m_A 65 SNIIRTIEKVQPDEVYNLAAQSFVGV---SFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTE 141 (345)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCCHHH---HTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCT
T ss_pred HHHHHHHHhcCCCEEEECCCCcchhh---hhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCc
Confidence 99999998667899999999754221 2233466789999999999999998886239999999999997653 4444
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+ .+..+.+.|+.+|+++|.+++.++.+++++++++|++++|||+...+. +..
T Consensus 142 ~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~--------------~~~ 193 (345)
T 2z1m_A 142 K--------------TPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEF--------------VTR 193 (345)
T ss_dssp T--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS--------------HHH
T ss_pred c--------------CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcc--------------hhH
Confidence 3 244567899999999999999999999999999999999999854321 012
Q ss_pred hHHHHHHHHhcCCC-eEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCC
Q 011706 324 ALNRFCVQAAVGHP-LTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGL 401 (479)
Q Consensus 324 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~ 401 (479)
.+..++.++..++. ..+++++.+.++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+. +|.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~--~~~i~~~~~~s~~e~~~~i~~~---~g~ 266 (345)
T 2z1m_A 194 KITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--PD--DYVIATGETHTVREFVEKAAKI---AGF 266 (345)
T ss_dssp HHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--CC--CEEECCSCCEEHHHHHHHHHHH---TTC
T ss_pred HHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--Cc--eEEEeCCCCccHHHHHHHHHHH---hCC
Confidence 23445556666653 4456777888999999999999999998754 23 899998 679999999999998 777
Q ss_pred cceee-------------------ecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 402 DVKTI-------------------SVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 402 ~~~~~-------------------~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+.++. ..+............+|++|+++ |||+|+++++++++++++|+.....
T Consensus 267 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 339 (345)
T 2z1m_A 267 DIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRVR 339 (345)
T ss_dssp CEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred CccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHhc
Confidence 65432 11100111122345679999987 9999999999999999999887544
No 35
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=100.00 E-value=1.3e-40 Score=329.58 Aligned_cols=307 Identities=24% Similarity=0.334 Sum_probs=239.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+|||||||||||++|+++|+++|++|++++|....... .+..+ ....++.++.+|++
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~~--~~~~~~~~~~~D~~ 85 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR----------------NVEHW--IGHENFELINHDVV 85 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG----------------GTGGG--TTCTTEEEEECCTT
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh----------------hhhhh--ccCCceEEEeCccC
Confidence 3467899999999999999999999999999999985432110 01111 11247889999998
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CC
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DI 241 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~ 241 (479)
+.. +. ++|+|||+||.........+ +...+++|+.|+.+++++|++.+ .+|||+||.++||.... ++
T Consensus 86 ~~~-----~~--~~d~vih~A~~~~~~~~~~~---~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~v~g~~~~~~~ 153 (343)
T 2b69_A 86 EPL-----YI--EVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQ 153 (343)
T ss_dssp SCC-----CC--CCSEEEECCSCCSHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGBSCSSSSB
T ss_pred Chh-----hc--CCCEEEECccccCchhhhhC---HHHHHHHHHHHHHHHHHHHHHhC--CcEEEECcHHHhCCCCCCCC
Confidence 863 44 79999999997543322222 35678999999999999999987 38999999999987643 55
Q ss_pred cCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 242 EEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 242 ~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
.|+.+... .+..+.+.|+.+|+++|.+++.+++++|++++++||++||||+..+..
T Consensus 154 ~E~~~~~~---------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~--------------- 209 (343)
T 2b69_A 154 SEDYWGHV---------NPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND--------------- 209 (343)
T ss_dssp CTTCCCBC---------CSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC---------------
T ss_pred cccccccC---------CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCc---------------
Confidence 55432111 234567899999999999999999888999999999999999764310
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
..++..++..+..++++.+++++.+.++|+|++|+|++++.+++.+. ++ +||+++ +.+|+.|+++.+.+. +|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~--~~~i~~~~~~s~~e~~~~i~~~---~g 282 (343)
T 2b69_A 210 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--SS--PVNLGNPEEHTILEFAQLIKNL---VG 282 (343)
T ss_dssp CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--CS--CEEESCCCEEEHHHHHHHHHHH---HT
T ss_pred ccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--CC--eEEecCCCCCcHHHHHHHHHHH---hC
Confidence 23566778888889998888988899999999999999999998653 44 899998 679999999999998 88
Q ss_pred CcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHh
Q 011706 401 LDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
.+.++...+.... ......+|++|+++ |||+|+++++++++++++|++..
T Consensus 283 ~~~~~~~~p~~~~--~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 283 SGSEIQFLSEAQD--DPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp CCCCEEEECCCTT--CCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCCceeCCCCCC--CCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 7777766654321 23345689999987 99999999999999999998754
No 36
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=100.00 E-value=2.3e-41 Score=326.31 Aligned_cols=276 Identities=15% Similarity=0.123 Sum_probs=229.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|||||||||||++|+++|+++|++|++++|. .+|++|.+.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------------------~~D~~d~~~ 47 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------------------LLDITNISQ 47 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------------------TSCTTCHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------------------ccCCCCHHH
Confidence 389999999999999999999999999998761 389999999
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCCc
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEGY 245 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~~ 245 (479)
+.++++..++|+|||+||......... ++...+++|+.|+.+++++|++.++ +|||+||.++||.... ++.|+
T Consensus 48 ~~~~~~~~~~d~vi~~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~SS~~vy~~~~~~~~~E~- 121 (287)
T 3sc6_A 48 VQQVVQEIRPHIIIHCAAYTKVDQAEK---ERDLAYVINAIGARNVAVASQLVGA--KLVYISTDYVFQGDRPEGYDEF- 121 (287)
T ss_dssp HHHHHHHHCCSEEEECCCCCCHHHHTT---CHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGSCCCCSSCBCTT-
T ss_pred HHHHHHhcCCCEEEECCcccChHHHhc---CHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEchhhhcCCCCCCCCCCC-
Confidence 999998767999999999765433322 3466789999999999999999884 7999999999987653 66665
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
.+..|.+.|+.+|+++|++++.+ +.+++++||++||||+.. .++
T Consensus 122 -------------~~~~p~~~Y~~sK~~~E~~~~~~----~~~~~ilR~~~v~G~~~~-------------------~~~ 165 (287)
T 3sc6_A 122 -------------HNPAPINIYGASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGN-------------------NFV 165 (287)
T ss_dssp -------------SCCCCCSHHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC-------------------CHH
T ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHh----CCCcEEEeeeeecCCCCC-------------------cHH
Confidence 35567899999999999988765 447899999999999753 346
Q ss_pred HHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCcce
Q 011706 326 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLDVK 404 (479)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~~~ 404 (479)
..++..+..++++.++++ +.++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+. +|.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~--~~--~~~i~~~~~~s~~e~~~~i~~~---~g~~~~ 236 (287)
T 3sc6_A 166 KTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL--YG--TYHVSNTGSCSWFEFAKKIFSY---ANMKVN 236 (287)
T ss_dssp HHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC--CE--EEECCCBSCEEHHHHHHHHHHH---HTCCCE
T ss_pred HHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC--CC--eEEEcCCCcccHHHHHHHHHHH---cCCCcc
Confidence 677888888888888764 78999999999999999999866 33 999999 679999999999998 888777
Q ss_pred eeecCC---CCcccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHH
Q 011706 405 TISVPN---PRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 405 ~~~~~~---~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
+...+. +..........+|++|+++|||+|.++++++++++++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 237 VLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp EEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred eeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 766543 22223334567899999999999999999999999998743
No 37
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=100.00 E-value=9.3e-41 Score=332.38 Aligned_cols=301 Identities=16% Similarity=0.177 Sum_probs=235.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+|||||||||||++|+++|+++| ++|++++|...... ...+ .++. +.+|++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------------------~~~~-----~~~~-~~~d~~ 99 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK------------------FVNL-----VDLN-IADYMD 99 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG------------------GGGT-----TTSC-CSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch------------------hhcc-----cCce-EeeecC
Confidence 457899999999999999999999999 99999988643210 0001 1223 679999
Q ss_pred ChHHHHHHhhhc---CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC
Q 011706 163 DFEFLSESFKSF---EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 163 d~~~~~~~~~~~---~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~ 239 (479)
|.+.++++++.. ++|+|||+||.... ...++..++++|+.|+.+++++|++.++ +|||+||.++||....
T Consensus 100 ~~~~~~~~~~~~~~~~~d~Vih~A~~~~~-----~~~~~~~~~~~n~~~~~~ll~a~~~~~~--r~V~~SS~~v~g~~~~ 172 (357)
T 2x6t_A 100 KEDFLIQIMAGEEFGDVEAIFHEGACSST-----TEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTS 172 (357)
T ss_dssp HHHHHHHHHTTCCCSSCCEEEECCSCCCT-----TCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEEEGGGGCSCSS
T ss_pred cHHHHHHHHhhcccCCCCEEEECCcccCC-----ccCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcchHHhCCCCC
Confidence 999999988732 49999999997543 1223456789999999999999999875 8999999999987654
Q ss_pred -CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 240 -DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 240 -~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
++.|+ .+..|.+.|+.+|+++|.+++.++.++|++++++||++||||+..+.
T Consensus 173 ~~~~E~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~------------- 225 (357)
T 2x6t_A 173 DFIESR--------------EYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK------------- 225 (357)
T ss_dssp CCCSSG--------------GGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTC-------------
T ss_pred CCcCCc--------------CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCC-------------
Confidence 55554 24456789999999999999999888899999999999999986421
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCCCc-eeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHh
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQ-TRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAG 396 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~ 396 (479)
+.+...+..++..+..++++.+++++.+ .++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~--~~~i~~~~~~s~~e~~~~i~~~- 300 (357)
T 2x6t_A 226 GSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SG--IFNLGTGRAESFQAVADATLAY- 300 (357)
T ss_dssp GGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC--CE--EEEESCSCCEEHHHHHHHHHHH-
T ss_pred cccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC--CC--eEEecCCCcccHHHHHHHHHHH-
Confidence 1113456778888888988888888888 9999999999999999998765 44 999998 679999999999998
Q ss_pred hhcCCcceeeecCCCC--cccccccccCCchHHHHcCC-cccccHHHHHHHHHHHHH
Q 011706 397 EKLGLDVKTISVPNPR--VEAEEHYYNAKHTKLIELGL-QPHILSDSLLDSLLNFAI 450 (479)
Q Consensus 397 ~~~g~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lG~-~p~~~~~~~~~~~~~~~~ 450 (479)
+|.+ ++...+.+. .........+|++|+++||| .|.++++++++++++|++
T Consensus 301 --~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~ 354 (357)
T 2x6t_A 301 --HKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLN 354 (357)
T ss_dssp --HTCC-CCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC
T ss_pred --cCCC-CceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHh
Confidence 7766 333333222 11122345689999988999 788999999999999874
No 38
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=100.00 E-value=3.9e-40 Score=330.84 Aligned_cols=317 Identities=20% Similarity=0.167 Sum_probs=237.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCC-ceeEEEcccCChH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGK-NIELYIGDICDFE 165 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~~Dl~d~~ 165 (479)
|+||||||+||||++|+++|+++|++|++++|....... ..+. .+ ..... ..+. ++.++.+|++|.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~---~~---~~~~~-~~~~~~~~~~~~Dl~d~~ 96 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNT-----QRIN---HI---YIDPH-NVNKALMKLHYADLTDAS 96 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-----TTTT---TT---C---------CCEEEEECCTTCHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccc-----hhhh---hh---hhccc-cccccceEEEECCCCCHH
Confidence 789999999999999999999999999999986432100 0000 00 00000 0112 7889999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCc----ceEEEeeccccccCCCCCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQE----CHLVKLGTMGEYGTPNIDI 241 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~----~~~V~~SS~~v~g~~~~~~ 241 (479)
++.++++..++|+||||||......... ++...+++|+.|+.+++++|++.+++ .+|||+||.++||....++
T Consensus 97 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~---~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~ 173 (381)
T 1n7h_A 97 SLRRWIDVIKPDEVYNLAAQSHVAVSFE---IPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ 173 (381)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHH---SHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSB
T ss_pred HHHHHHHhcCCCEEEECCcccCcccccc---CHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCC
Confidence 9999998666899999999754322222 34567899999999999999887632 3999999999999765455
Q ss_pred cCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 242 EEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 242 ~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
.|+ .+..+.+.|+.+|+++|.+++.++.+++++++++|++++|||+..... .
T Consensus 174 ~E~--------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~--------------~ 225 (381)
T 1n7h_A 174 SET--------------TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENF--------------V 225 (381)
T ss_dssp CTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS--------------H
T ss_pred CCC--------------CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcc--------------h
Confidence 554 244668899999999999999999989999999999999999754211 1
Q ss_pred cchHHHHHHHHhcCCC-eEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhc
Q 011706 322 GTALNRFCVQAAVGHP-LTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKL 399 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~ 399 (479)
...+..++..+..+.. ...++++.+.++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+. +
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~--~~~i~~~~~~s~~e~~~~i~~~---~ 298 (381)
T 1n7h_A 226 TRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK--PD--DYVVATEEGHTVEEFLDVSFGY---L 298 (381)
T ss_dssp HHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS--CC--EEEECCSCEEEHHHHHHHHHHH---T
T ss_pred hHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC--CC--eEEeeCCCCCcHHHHHHHHHHH---c
Confidence 1234455666666753 4456888899999999999999999998754 33 999998 579999999999998 7
Q ss_pred CCcce--eeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhc
Q 011706 400 GLDVK--TISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFK 453 (479)
Q Consensus 400 g~~~~--~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~ 453 (479)
|.+.. +...+..........+.+|++|+++ |||+|+++++++++++++|+....
T Consensus 299 g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 355 (381)
T 1n7h_A 299 GLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELA 355 (381)
T ss_dssp TCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCcccccccCcccCCccccccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhhc
Confidence 76532 2222211111223445689999987 999999999999999999987654
No 39
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.1e-40 Score=326.45 Aligned_cols=291 Identities=14% Similarity=0.103 Sum_probs=224.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++|+++|+++|++|++++|...... .+ ...+++++.+|++|.+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------~l---~~~~~~~~~~Dl~d~~ 69 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ--------------------RL---AYLEPECRVAEMLDHA 69 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG--------------------GG---GGGCCEEEECCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh--------------------hh---ccCCeEEEEecCCCHH
Confidence 469999999999999999999999999999998543110 00 1136889999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC--CCcC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI--DIEE 243 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~--~~~e 243 (479)
++.++++ ++|+|||+||.... ...++...+++|+.|+.+++++|++.+++ +|||+||.++|+.... ..+|
T Consensus 70 ~~~~~~~--~~d~vih~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~~E 141 (342)
T 2x4g_A 70 GLERALR--GLDGVIFSAGYYPS-----RPRRWQEEVASALGQTNPFYAACLQARVP-RILYVGSAYAMPRHPQGLPGHE 141 (342)
T ss_dssp HHHHHTT--TCSEEEEC-----------------CHHHHHHHHHHHHHHHHHHHTCS-CEEEECCGGGSCCCTTSSCBCT
T ss_pred HHHHHHc--CCCEEEECCccCcC-----CCCCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEECCHHhhCcCCCCCCCCC
Confidence 9999998 89999999996431 11234567899999999999999999887 9999999999987543 2234
Q ss_pred CceeecCCCCCCCCCCCCCC----CchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCC-CchhhhHhhhcccCCC
Q 011706 244 GYITINHNGRTDTLPYPKQA----SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT-DETAMHEELCNRLDYD 318 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~----~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~-~~~~~~~~~~~~~~~~ 318 (479)
+ .+..| .+.|+.+|+++|.+++.+++. |++++++||++||||+. .+
T Consensus 142 ~--------------~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-------------- 192 (342)
T 2x4g_A 142 G--------------LFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP-------------- 192 (342)
T ss_dssp T--------------CCCSSCCTTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC--------------
T ss_pred C--------------CCCCccccccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc--------------
Confidence 3 23345 789999999999999998877 99999999999999975 21
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHHhhh
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEK 398 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~~~~ 398 (479)
. +..++..+..+..+.+ +++.++|+|++|+|++++.+++++.. ++ +||++++.+|+.|+++.+.+.
T Consensus 193 ----~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~--~~~v~~~~~s~~e~~~~i~~~--- 258 (342)
T 2x4g_A 193 ----T-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GE--RYLLTGHNLEMADLTRRIAEL--- 258 (342)
T ss_dssp ----S-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TC--EEEECCEEEEHHHHHHHHHHH---
T ss_pred ----c-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-Cc--eEEEcCCcccHHHHHHHHHHH---
Confidence 1 2345666777776655 46788999999999999999987654 55 999999339999999999998
Q ss_pred cCCcceeeecCCCC---------------c-------c---cccccccCCchHHHH-cCC-cccccHHHHHHHHHHHHHH
Q 011706 399 LGLDVKTISVPNPR---------------V-------E---AEEHYYNAKHTKLIE-LGL-QPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 399 ~g~~~~~~~~~~~~---------------~-------~---~~~~~~~~d~~k~~~-lG~-~p~~~~~~~~~~~~~~~~~ 451 (479)
+|.+.++ ..+... + . .......+|++|+++ ||| +| ++++++++++++|++.
T Consensus 259 ~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~ 336 (342)
T 2x4g_A 259 LGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRD 336 (342)
T ss_dssp HTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHH
T ss_pred hCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHH
Confidence 7776654 433210 0 0 012355689999987 999 99 8999999999999875
Q ss_pred h
Q 011706 452 F 452 (479)
Q Consensus 452 ~ 452 (479)
.
T Consensus 337 ~ 337 (342)
T 2x4g_A 337 N 337 (342)
T ss_dssp T
T ss_pred c
Confidence 3
No 40
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=5e-41 Score=327.37 Aligned_cols=298 Identities=16% Similarity=0.183 Sum_probs=215.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC-CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 88 RVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 88 ~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
+|||||||||||++|+++|+++| ++|++++|...... ...+ .++. +.+|++|.+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------------------~~~~-----~~~~-~~~d~~~~~~ 56 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK------------------FVNL-----VDLN-IADYMDKEDF 56 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG------------------GHHH-----HTSC-CSEEEEHHHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch------------------hhhc-----Ccce-eccccccHHH
Confidence 48999999999999999999999 99999988643210 0011 1222 6799999999
Q ss_pred HHHHhhhc---CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCc
Q 011706 167 LSESFKSF---EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIE 242 (479)
Q Consensus 167 ~~~~~~~~---~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~ 242 (479)
++++++.. ++|+|||+||.... . ..++..++++|+.|+.+++++|++.++ +|||+||.++||.... ++.
T Consensus 57 ~~~~~~~~~~~~~d~vi~~a~~~~~--~---~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~v~g~~~~~~~~ 129 (310)
T 1eq2_A 57 LIQIMAGEEFGDVEAIFHEGACSST--T---EWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTSDFIE 129 (310)
T ss_dssp HHHHHTTCCCSSCCEEEECCSCCCT--T---CCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEEEGGGGTTCCSCBCS
T ss_pred HHHHHhccccCCCcEEEECcccccC--c---ccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEeeHHHhCCCCCCCCC
Confidence 99998731 49999999997543 1 123456789999999999999999885 8999999999987654 555
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+ .+..|.+.|+.+|+++|.+++.+++++|++++++||++||||+..+. +.+.
T Consensus 130 E~--------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~-------------~~~~ 182 (310)
T 1eq2_A 130 SR--------------EYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK-------------GSMA 182 (310)
T ss_dssp SG--------------GGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGG-------------GGGS
T ss_pred CC--------------CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCC-------------Cccc
Confidence 54 24456789999999999999999888899999999999999986431 1113
Q ss_pred chHHHHHHHHhcCCCeEEecCCCc-eeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQ-TRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
.++..++..+..++++.+++++.+ .++|+|++|+|++++.+++++. ++ +||+++ +.+|+.|+++.+.+. +|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--~~--~~~i~~~~~~s~~e~~~~i~~~---~g 255 (310)
T 1eq2_A 183 SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SG--IFNLGTGRAESFQAVADATLAY---HK 255 (310)
T ss_dssp CHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CE--EEEESCSCCBCHHHHHHHC--------
T ss_pred hHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--CC--eEEEeCCCccCHHHHHHHHHHH---cC
Confidence 456778888888888888888888 9999999999999999998765 44 999998 689999999999998 67
Q ss_pred Cc-ceeeecCCCCcccccccccCCchHHHHcCC-cccccHHHHHHHHHHHHH
Q 011706 401 LD-VKTISVPNPRVEAEEHYYNAKHTKLIELGL-QPHILSDSLLDSLLNFAI 450 (479)
Q Consensus 401 ~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~~~~~~~~~~~~~~ 450 (479)
.+ ++....+............+|++|+++||| .|.++++++++++++|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~ 307 (310)
T 1eq2_A 256 KGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLN 307 (310)
T ss_dssp ----------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC
T ss_pred CCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 65 332222221111122345689999988999 788999999999998764
No 41
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=100.00 E-value=3.2e-40 Score=324.93 Aligned_cols=292 Identities=20% Similarity=0.264 Sum_probs=229.4
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|+||||||+||||++|+++|+++|++|++++|....... ....+ .++.++.+|+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------------~~~~l--~~v~~~~~Dl 74 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKRE-------------------VLPPV--AGLSVIEGSV 74 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGG-------------------GSCSC--TTEEEEECCT
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchh-------------------hhhcc--CCceEEEeeC
Confidence 35678999999999999999999999999999999985432100 00111 4788999999
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC--
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-- 239 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-- 239 (479)
+|.+++.++++..++|+||||||..... ... ++. +++|+.|+.+++++|.+.+++ +|||+||.++|+....
T Consensus 75 ~d~~~~~~~~~~~~~D~vih~A~~~~~~-~~~---~~~--~~~N~~~~~~l~~a~~~~~~~-~iV~~SS~~~~~~~~~~~ 147 (330)
T 2pzm_A 75 TDAGLLERAFDSFKPTHVVHSAAAYKDP-DDW---AED--AATNVQGSINVAKAASKAGVK-RLLNFQTALCYGRPATVP 147 (330)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCCCCSCT-TCH---HHH--HHHHTHHHHHHHHHHHHHTCS-EEEEEEEGGGGCSCSSSS
T ss_pred CCHHHHHHHHhhcCCCEEEECCccCCCc-ccc---Chh--HHHHHHHHHHHHHHHHHcCCC-EEEEecCHHHhCCCccCC
Confidence 9999999999866799999999976532 112 223 789999999999999998877 9999999999986532
Q ss_pred -CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 240 -DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 240 -~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
+++|+ . .+.+.|+.+|+++|.+++.+ +++++++||+++|||+..
T Consensus 148 ~~~~E~--------------~--~~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--------------- 192 (330)
T 2pzm_A 148 IPIDSP--------------T--APFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--------------- 192 (330)
T ss_dssp BCTTCC--------------C--CCCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC---------------
T ss_pred CCcCCC--------------C--CCCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC---------------
Confidence 44443 1 35789999999999988765 899999999999999852
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHH-HHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHh
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAG 396 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~-a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~ 396 (479)
..++..++..+..+. .+++++. .++|+|++|+|+ +++.+++++. ++ +||+++ ..+|+.|+++.+.+.
T Consensus 193 ---~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~--~~~v~~~~~~s~~e~~~~i~~~- 261 (330)
T 2pzm_A 193 ---IGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TG--VFNVSTGEGHSIKEVFDVVLDY- 261 (330)
T ss_dssp ---SSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CE--EEEESCSCCEEHHHHHHHHHHH-
T ss_pred ---CCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CC--EEEeCCCCCCCHHHHHHHHHHH-
Confidence 224556666666665 4556666 889999999999 9999998754 44 999998 579999999999998
Q ss_pred hhcCCcceeeecCCCCcccccccccCCchHH-----HHcCCcccccHHHHHHHHHHHHHHhc
Q 011706 397 EKLGLDVKTISVPNPRVEAEEHYYNAKHTKL-----IELGLQPHILSDSLLDSLLNFAIQFK 453 (479)
Q Consensus 397 ~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~lG~~p~~~~~~~~~~~~~~~~~~~ 453 (479)
+|.+ ++...+.+. ......+|++|+ ++|||+|+++++++++++++|++.+.
T Consensus 262 --~g~~-~~~~~~~~~---~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~ 317 (330)
T 2pzm_A 262 --VGAT-LAEPVPVVA---PGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYG 317 (330)
T ss_dssp --HTCC-CSSCCCEEC---CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred --hCCC-CceeCCCCc---chhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhC
Confidence 7766 443333221 234456788888 77999999999999999999998653
No 42
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=100.00 E-value=6.8e-40 Score=320.59 Aligned_cols=299 Identities=15% Similarity=0.172 Sum_probs=230.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhC--CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 88 RVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 88 ~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+||||||+||||++|+++|+++ |++|++++|..... .++.++.+|++|++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------------------~~~~~~~~D~~d~~ 52 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------------------GGIKFITLDVSNRD 52 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------------------TTCCEEECCTTCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------------------cCceEEEecCCCHH
Confidence 4899999999999999999999 89999998753210 14678899999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC--CCcC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI--DIEE 243 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~--~~~e 243 (479)
++.++++..++|+|||+||..... .. .++...+++|+.|+.+++++|++.+++ +|||+||.++|+.... +..|
T Consensus 53 ~~~~~~~~~~~d~vih~a~~~~~~-~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~~e 127 (317)
T 3ajr_A 53 EIDRAVEKYSIDAIFHLAGILSAK-GE---KDPALAYKVNMNGTYNILEAAKQHRVE-KVVIPSTIGVFGPETPKNKVPS 127 (317)
T ss_dssp HHHHHHHHTTCCEEEECCCCCHHH-HH---HCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGCCTTSCSSSBCS
T ss_pred HHHHHHhhcCCcEEEECCcccCCc-cc---cChHHHhhhhhHHHHHHHHHHHHcCCC-EEEEecCHHHhCCCCCCCCccc
Confidence 999999866799999999964321 11 233567899999999999999999887 9999999999986431 3333
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+ .+..|.+.|+.+|+++|.+++.+++++|++++++||+++||+...+.. + ...
T Consensus 128 ~--------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~------------~-~~~ 180 (317)
T 3ajr_A 128 I--------------TITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTA------------G-TTD 180 (317)
T ss_dssp S--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCS------------C-SST
T ss_pred c--------------ccCCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCC------------c-chh
Confidence 3 244678999999999999999998888999999999999998643210 0 011
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC---CCCceEEEeCCCCcCHHHHHHHHHHHhhhcC
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ---PGEFRVFNQFTEQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~---~g~~~~~ni~~~~~s~~el~~~i~~~~~~~g 400 (479)
.+..++.....++.+.+++++++.++|+|++|+|++++.+++++.. .++ +||++++.+|+.|+++.+.+. +|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~--~~~i~~~~~s~~e~~~~i~~~---~~ 255 (317)
T 3ajr_A 181 YAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRN--GYNVTAYTFTPSELYSKIKER---IP 255 (317)
T ss_dssp HHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCS--CEECCSEEECHHHHHHHHHTT---CC
T ss_pred HHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCc--eEecCCccccHHHHHHHHHHH---CC
Confidence 2233344555666677777778889999999999999999987643 234 999998779999999999997 66
Q ss_pred CcceeeecCCCCccc-ccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHh
Q 011706 401 LDVKTISVPNPRVEA-EEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 401 ~~~~~~~~~~~~~~~-~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
. .++.+.+..+... ......+|++|+++ |||+|+++++++++++++|++..
T Consensus 256 ~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 308 (317)
T 3ajr_A 256 E-FEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK 308 (317)
T ss_dssp S-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred c-cccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 2 2333333211111 11234589999987 99999999999999999998653
No 43
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=100.00 E-value=8.9e-41 Score=322.15 Aligned_cols=273 Identities=18% Similarity=0.174 Sum_probs=220.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|+||||| +||||++|+++|+++|++|++++|.... ...+++++.+|++|.
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~---------------------------~~~~~~~~~~Dl~d~ 53 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP---------------------------MPAGVQTLIADVTRP 53 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC---------------------------CCTTCCEEECCTTCG
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc---------------------------cccCCceEEccCCCh
Confidence 467999999 5999999999999999999999986431 025789999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEE 243 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e 243 (479)
+++.++++. ++|+|||+||... .+ ....+++|+.++.+++++|++.+++ +|||+||.++||.... ++.|
T Consensus 54 ~~~~~~~~~-~~d~vih~a~~~~-----~~---~~~~~~~n~~~~~~ll~a~~~~~~~-~~v~~SS~~vyg~~~~~~~~E 123 (286)
T 3gpi_A 54 DTLASIVHL-RPEILVYCVAASE-----YS---DEHYRLSYVEGLRNTLSALEGAPLQ-HVFFVSSTGVYGQEVEEWLDE 123 (286)
T ss_dssp GGCTTGGGG-CCSEEEECHHHHH-----HC--------CCSHHHHHHHHHHTTTSCCC-EEEEEEEGGGCCCCCSSEECT
T ss_pred HHHHHhhcC-CCCEEEEeCCCCC-----CC---HHHHHHHHHHHHHHHHHHHhhCCCC-EEEEEcccEEEcCCCCCCCCC
Confidence 999999983 4999999998632 12 2456789999999999999998887 9999999999998654 4555
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+ .+..|.+.|+.+|+++|.+ +.+ ++++++||++||||+..
T Consensus 124 ~--------------~~~~p~~~Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~-------------------- 163 (286)
T 3gpi_A 124 D--------------TPPIAKDFSGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL-------------------- 163 (286)
T ss_dssp T--------------SCCCCCSHHHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC--------------------
T ss_pred C--------------CCCCCCChhhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch--------------------
Confidence 5 3556789999999999998 543 99999999999999743
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC--CCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP--AQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
.++..+.. +. ..+++++.++|+|++|+|++++.+++++ ...++ +||+++ +.+|+.|+++.+.+. +|
T Consensus 164 ---~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~e~~~~i~~~---~g 232 (286)
T 3gpi_A 164 ---RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPER--LYIVTDNQPLPVHDLLRWLADR---QG 232 (286)
T ss_dssp ---HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCS--EEEECCSCCEEHHHHHHHHHHH---TT
T ss_pred ---hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCc--eEEEeCCCCCCHHHHHHHHHHH---cC
Confidence 23444444 32 2366788899999999999999999985 33454 999998 679999999999998 88
Q ss_pred CcceeeecCCCCcccccccccCCchHHHHcCCcccc-cHHHHHHHHHHHHHH
Q 011706 401 LDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHI-LSDSLLDSLLNFAIQ 451 (479)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~-~~~~~~~~~~~~~~~ 451 (479)
.+.++...+ .......+|++|+++|||+|++ +++++++++++|...
T Consensus 233 ~~~~~~~~~-----~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~ 279 (286)
T 3gpi_A 233 IAYPAGATP-----PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE 279 (286)
T ss_dssp CCCCCSCCC-----CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC
T ss_pred CCCCCCCCc-----ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhc
Confidence 776655433 2344567899999999999999 799999999999864
No 44
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=100.00 E-value=1.3e-39 Score=321.05 Aligned_cols=293 Identities=18% Similarity=0.221 Sum_probs=225.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+|||||||||||++|+++|+++|++|++++|....... .+..+ .++.++.+|++
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------------~l~~~--~~~~~~~~Dl~ 76 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE-------------------HLKDH--PNLTFVEGSIA 76 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------------------GSCCC--TTEEEEECCTT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh-------------------hHhhc--CCceEEEEeCC
Confidence 3468899999999999999999999999999999986432100 01111 47889999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecccccc----CCC
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYG----TPN 238 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g----~~~ 238 (479)
|++++.++++..++|+||||||..... ...+ +. +++|+.|+.+++++|++.+++ +|||+||.++|| ...
T Consensus 77 d~~~~~~~~~~~~~D~vih~A~~~~~~-~~~~---~~--~~~N~~~~~~l~~a~~~~~~~-~iV~~SS~~~~g~~~~~~~ 149 (333)
T 2q1w_A 77 DHALVNQLIGDLQPDAVVHTAASYKDP-DDWY---ND--TLTNCVGGSNVVQAAKKNNVG-RFVYFQTALCYGVKPIQQP 149 (333)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCCSCT-TCHH---HH--HHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGGCSCCCSSS
T ss_pred CHHHHHHHHhccCCcEEEECceecCCC-ccCC---hH--HHHHHHHHHHHHHHHHHhCCC-EEEEECcHHHhCCCcccCC
Confidence 999999999844599999999976533 2222 22 789999999999999998877 999999999998 433
Q ss_pred CCCcCCceeecCCCCCCCCCCCCCCC-chhhhhhHHHHHHHHH-HHHHhCCceEEeecCeeecCCCCchhhhHhhhcccC
Q 011706 239 IDIEEGYITINHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAF-TCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLD 316 (479)
Q Consensus 239 ~~~~e~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~-~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~ 316 (479)
.+++|+ . .|. +.|+.+|+++|.+++. ++ +++++||+++|||+..
T Consensus 150 ~~~~E~---------------~-~p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~------------- 195 (333)
T 2q1w_A 150 VRLDHP---------------R-NPANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV------------- 195 (333)
T ss_dssp BCTTSC---------------C-CCTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC-------------
T ss_pred CCcCCC---------------C-CCCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc-------------
Confidence 234443 1 345 8999999999999876 54 7999999999999731
Q ss_pred CCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHH
Q 011706 317 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKA 395 (479)
Q Consensus 317 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~ 395 (479)
..++..++..+..+. .+++ +.+.++|+|++|+|++++.+++++. ++ +||+++ ..+|+.|+++.+.+.
T Consensus 196 -----~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~--~~~v~~~~~~s~~e~~~~i~~~ 263 (333)
T 2q1w_A 196 -----SGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HG--AYHFSSGTDVAIKELYDAVVEA 263 (333)
T ss_dssp -----SSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CE--EEECSCSCCEEHHHHHHHHHHH
T ss_pred -----CcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CC--EEEeCCCCCccHHHHHHHHHHH
Confidence 124566677777766 3445 5678999999999999999998765 44 999998 679999999999998
Q ss_pred hhhcCCcceeeecCCCC--cccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHHhc
Q 011706 396 GEKLGLDVKTISVPNPR--VEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQFK 453 (479)
Q Consensus 396 ~~~~g~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~ 453 (479)
+|.+ ++...+.+. .........+|++|++++||+|+++++++++++++|++...
T Consensus 264 ---~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~ 319 (333)
T 2q1w_A 264 ---MALP-SYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYG 319 (333)
T ss_dssp ---TTCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ---hCCC-CceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHC
Confidence 7765 333322211 11112456789999987799999999999999999998653
No 45
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=100.00 E-value=5.6e-40 Score=320.97 Aligned_cols=291 Identities=14% Similarity=0.135 Sum_probs=201.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++|+++|+++|++|++++|.... .+ ++.+|++|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------------------~~--~~~~Dl~d~~ 50 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------------------PK--FEQVNLLDSN 50 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------------------CC--eEEecCCCHH
Confidence 5799999999999999999999999999999874320 12 6789999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGY 245 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~ 245 (479)
++.++++..++|+||||||........ .++...+++|+.|+.+++++|++.+ .+|||+||.++|+....++.|+
T Consensus 51 ~~~~~~~~~~~d~vih~A~~~~~~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~v~~~~~~~~~E~- 124 (315)
T 2ydy_A 51 AVHHIIHDFQPHVIVHCAAERRPDVVE---NQPDAASQLNVDASGNLAKEAAAVG--AFLIYISSDYVFDGTNPPYREE- 124 (315)
T ss_dssp -CHHHHHHHCCSEEEECC----------------------CHHHHHHHHHHHHHT--CEEEEEEEGGGSCSSSCSBCTT-
T ss_pred HHHHHHHhhCCCEEEECCcccChhhhh---cCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEchHHHcCCCCCCCCCC-
Confidence 999999865699999999975433222 2345678999999999999999987 3899999999998754456665
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
.+..+.+.|+.+|+++|.+++.+ +++++++||++||||...+. ..++
T Consensus 125 -------------~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~----------------~~~~ 171 (315)
T 2ydy_A 125 -------------DIPAPLNLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLE----------------ESAV 171 (315)
T ss_dssp -------------SCCCCCSHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGG----------------GSTT
T ss_pred -------------CCCCCcCHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCccc----------------ccHH
Confidence 24456789999999999988764 67889999999999986531 0123
Q ss_pred HHHHHHHh-cCCCeEEecCCCceeccccHHHHHHHHHHHHhCC---CCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcC
Q 011706 326 NRFCVQAA-VGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP---AQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 326 ~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g 400 (479)
..++..+. .+.++.+.+ .+.++|+|++|+|++++.+++++ ...++ +||+++ +.+|+.|+++.+.+. +|
T Consensus 172 ~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~--~~~i~~~~~~s~~e~~~~i~~~---~g 244 (315)
T 2ydy_A 172 TVMFDKVQFSNKSANMDH--WQQRFPTHVKDVATVCRQLAEKRMLDPSIKG--TFHWSGNEQMTKYEMACAIADA---FN 244 (315)
T ss_dssp GGGHHHHHCCSSCEEEEC--SSBBCCEEHHHHHHHHHHHHHHHHTCTTCCE--EEECCCSCCBCHHHHHHHHHHH---TT
T ss_pred HHHHHHHHhcCCCeeecc--CceECcEEHHHHHHHHHHHHHhhccccCCCC--eEEEcCCCcccHHHHHHHHHHH---hC
Confidence 34455555 677766543 57789999999999999998763 23343 999998 679999999999998 77
Q ss_pred Ccce-eeecCC-CC-cccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHHhc
Q 011706 401 LDVK-TISVPN-PR-VEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQFK 453 (479)
Q Consensus 401 ~~~~-~~~~~~-~~-~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~ 453 (479)
.+.+ +...+. +. .........+|++|++++||+|.++++++++++++|++..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~ 300 (315)
T 2ydy_A 245 LPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLIDK 300 (315)
T ss_dssp CCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC--
T ss_pred CChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccch
Confidence 7654 333332 11 11122456789999988899999999999999998876543
No 46
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=100.00 E-value=9.7e-40 Score=323.01 Aligned_cols=306 Identities=12% Similarity=0.085 Sum_probs=237.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCC-------CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCcee
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKG-------YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIE 155 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G-------~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 155 (479)
.+++|+||||||+||||++|+++|+++| ++|++++|....... ....++.
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----------------------~~~~~~~ 67 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----------------------GFSGAVD 67 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----------------------TCCSEEE
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----------------------ccCCcee
Confidence 3578899999999999999999999999 899999986431100 0124788
Q ss_pred EEEcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-----CcceEEEeec
Q 011706 156 LYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-----QECHLVKLGT 230 (479)
Q Consensus 156 ~v~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-----~~~~~V~~SS 230 (479)
++.+|++|++++.++++. ++|+||||||.... ....++...+++|+.|+.+++++|++.+ ++ +|||+||
T Consensus 68 ~~~~Dl~d~~~~~~~~~~-~~d~vih~A~~~~~----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~-~iv~~SS 141 (342)
T 2hrz_A 68 ARAADLSAPGEAEKLVEA-RPDVIFHLAAIVSG----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKP-RVVFTSS 141 (342)
T ss_dssp EEECCTTSTTHHHHHHHT-CCSEEEECCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCC-EEEEEEE
T ss_pred EEEcCCCCHHHHHHHHhc-CCCEEEECCccCcc----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCc-EEEEeCc
Confidence 999999999999999853 79999999996431 1123456678999999999999998876 56 9999999
Q ss_pred cccccCCC-CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeec-CCCCchhhh
Q 011706 231 MGEYGTPN-IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG-VRTDETAMH 308 (479)
Q Consensus 231 ~~v~g~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~G-p~~~~~~~~ 308 (479)
.++|+... .+++|+ .+..+.+.|+.+|+++|.+++.++++++++++++|++.||| |+..
T Consensus 142 ~~~~~~~~~~~~~E~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~----- 202 (342)
T 2hrz_A 142 IAVFGAPLPYPIPDE--------------FHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKP----- 202 (342)
T ss_dssp GGGCCSSCCSSBCTT--------------CCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSC-----
T ss_pred hHhhCCCCCCCcCCC--------------CCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCC-----
Confidence 99998753 355554 34456889999999999999999888889999999999999 6532
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC---CCCceEEEeCCCCcCH
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ---PGEFRVFNQFTEQFSV 385 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~---~g~~~~~ni~~~~~s~ 385 (479)
.+....++..++.....++++.++.+++..++++|++|+|++++.+++.+.. .++ +||++++.+|+
T Consensus 203 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~--~~ni~g~~~s~ 271 (342)
T 2hrz_A 203 ---------NAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRR--NLSMPGLSATV 271 (342)
T ss_dssp ---------CCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCC--EEECCCEEEEH
T ss_pred ---------cchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCcc--EEEcCCCCCCH
Confidence 1111345677788888888877766666778899999999999999987642 344 99997667999
Q ss_pred HHHHHHHHHHhhhcCCcc--eeeecCCCCc-cc-ccccccCCchHHHHcCCcccccHHHHHHHHHHHHH
Q 011706 386 NQLAALVTKAGEKLGLDV--KTISVPNPRV-EA-EEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAI 450 (479)
Q Consensus 386 ~el~~~i~~~~~~~g~~~--~~~~~~~~~~-~~-~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~ 450 (479)
.|+++.+.+. +|.+. .+...+.+.. .. ......+|++|+++|||+|+++++++++++++|+.
T Consensus 272 ~e~~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 272 GEQIEALRKV---AGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp HHHHHHHHHH---HCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS
T ss_pred HHHHHHHHHH---cCcccccceeeccCcchhhhhcccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc
Confidence 9999999998 66554 2333332211 00 11122579999988999999999999999999875
No 47
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=5.1e-39 Score=347.23 Aligned_cols=332 Identities=23% Similarity=0.295 Sum_probs=240.9
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+||||++|+++|+++|++|++++|...... +..+.+..+...++.++.+|++
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~----------------~~~~~l~~~~~~~v~~v~~Dl~ 71 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTY----------------DSVARLEVLTKHHIPFYEVDLC 71 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT----------------HHHHHHHHHHTSCCCEEECCTT
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchH----------------HHHHHHhhccCCceEEEEcCCC
Confidence 346789999999999999999999999999999998643210 0111111112357889999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC----
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN---- 238 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~---- 238 (479)
|++++.++++..++|+|||+||.........+ ....+++|+.|+.+++++|++.+++ +|||+||.++||...
T Consensus 72 d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~---~~~~~~~Nv~gt~~ll~a~~~~~~~-~iV~~SS~~vyg~~~~~~~ 147 (699)
T 1z45_A 72 DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQI---PLRYYHNNILGTVVLLELMQQYNVS-KFVFSSSATVYGDATRFPN 147 (699)
T ss_dssp CHHHHHHHHHHSCCCEEEECCSCCCHHHHHHS---HHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCCGGGSTT
T ss_pred CHHHHHHHHHhCCCCEEEECCcccCcCccccC---HHHHHHHHHHHHHHHHHHHHHcCCC-EEEEECcHHHhCCCccccc
Confidence 99999999986679999999997543322222 2456899999999999999998887 999999999998642
Q ss_pred -CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH--hCCceEEeecCeeecCCCCchhhhHhhhccc
Q 011706 239 -IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA--WGIRATDLNQGVVYGVRTDETAMHEELCNRL 315 (479)
Q Consensus 239 -~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~ 315 (479)
.++.|+ .+..+.+.|+.+|+++|.+++.++++ .+++++++||++||||+...- ...
T Consensus 148 ~~~~~E~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~-------~g~ 206 (699)
T 1z45_A 148 MIPIPEE--------------CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGL-------IGE 206 (699)
T ss_dssp CCSBCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSS-------CCC
T ss_pred cCCcccc--------------CCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccc-------ccc
Confidence 133333 24456789999999999999998887 699999999999999863210 000
Q ss_pred CCCCcccchHHHHHHHHhcC--CCeEEec------CCCceeccccHHHHHHHHHHHHhCCC----CCCCceEEEeCC-CC
Q 011706 316 DYDGVFGTALNRFCVQAAVG--HPLTVYG------KGGQTRGYLDIRDTVQCVELAIANPA----QPGEFRVFNQFT-EQ 382 (479)
Q Consensus 316 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~~----~~g~~~~~ni~~-~~ 382 (479)
+..+....++. ++.++..+ .++.+++ ++.+.++||||+|+|++++.+++... ..+..++|||++ +.
T Consensus 207 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~ 285 (699)
T 1z45_A 207 DPLGIPNNLLP-YMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKG 285 (699)
T ss_dssp CCSSSCCSHHH-HHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCC
T ss_pred ccccchhHHHH-HHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCC
Confidence 00111122344 34444433 4666665 67889999999999999999987421 122234999998 67
Q ss_pred cCHHHHHHHHHHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcccCCcCCC
Q 011706 383 FSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKDRVDSKQI 461 (479)
Q Consensus 383 ~s~~el~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (479)
+|+.|+++.+.+. +|.++++...+... .....+.+|++|+++ |||+|+++++++++++++|++....+++.+..
T Consensus 286 ~s~~el~~~i~~~---~g~~~~~~~~~~~~--~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~~~~~~~ 360 (699)
T 1z45_A 286 STVFEVYHAFCKA---SGIDLPYKVTGRRA--GDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQLRGV 360 (699)
T ss_dssp EEHHHHHHHHHHH---HTCCCCC-----------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTCSCCTTE
T ss_pred CcHHHHHHHHHHH---hCCCCCceecCCCC--CccccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcchhhhhe
Confidence 9999999999998 77776655444322 223456789999986 99999999999999999999987777776543
No 48
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=100.00 E-value=4.2e-39 Score=311.26 Aligned_cols=275 Identities=16% Similarity=0.132 Sum_probs=222.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
..++|||||||||||++|+++|+++|++|++++|. .+|++|.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------------------~~Dl~d~ 52 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------------------DLDITNV 52 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------------------TCCTTCH
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------------------cCCCCCH
Confidence 35799999999999999999999999999998762 3799999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEE 243 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e 243 (479)
+++.++++..++|+||||||........ .++...+++|+.|+.+++++|++.++ +|||+||.++|+.... ++.|
T Consensus 53 ~~~~~~~~~~~~d~vih~A~~~~~~~~~---~~~~~~~~~nv~~~~~l~~a~~~~~~--~iv~~SS~~v~~~~~~~~~~E 127 (292)
T 1vl0_A 53 LAVNKFFNEKKPNVVINCAAHTAVDKCE---EQYDLAYKINAIGPKNLAAAAYSVGA--EIVQISTDYVFDGEAKEPITE 127 (292)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCCHHHHH---HCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGSCSCCSSCBCT
T ss_pred HHHHHHHHhcCCCEEEECCccCCHHHHh---cCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEechHHeECCCCCCCCCC
Confidence 9999999866799999999975432222 23456789999999999999999873 9999999999987643 5555
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+ .+..+.+.|+.+|+++|.+++.+ +.+++++||++|||| .. .
T Consensus 128 ~--------------~~~~~~~~Y~~sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~-------------------~ 169 (292)
T 1vl0_A 128 F--------------DEVNPQSAYGKTKLEGENFVKAL----NPKYYIVRTAWLYGD-GN-------------------N 169 (292)
T ss_dssp T--------------SCCCCCSHHHHHHHHHHHHHHHH----CSSEEEEEECSEESS-SS-------------------C
T ss_pred C--------------CCCCCccHHHHHHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc-------------------C
Confidence 4 24456789999999999988765 457999999999999 32 2
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCc
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLD 402 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~ 402 (479)
++..++..+..+.++.+++ ++.++|+|++|+|++++.+++++ .++ +||+++ +.+|+.|+++.+.+. +|.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~--~~~i~~~~~~s~~e~~~~i~~~---~g~~ 240 (292)
T 1vl0_A 170 FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYG--TFHCTCKGICSWYDFAVEIFRL---TGID 240 (292)
T ss_dssp HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCE--EEECCCBSCEEHHHHHHHHHHH---HCCC
T ss_pred hHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCc--EEEecCCCCccHHHHHHHHHHH---hCCC
Confidence 3556667777787777765 47789999999999999999875 344 999998 679999999999998 8877
Q ss_pred ceeeecCCCC---cccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHH
Q 011706 403 VKTISVPNPR---VEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAI 450 (479)
Q Consensus 403 ~~~~~~~~~~---~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~ 450 (479)
.++...+... .......+.+|++|+++ |||+|+ +++++++++++|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~ 291 (292)
T 1vl0_A 241 VKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 291 (292)
T ss_dssp CEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred CceeeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhc
Confidence 6665554321 11223456799999988 999999 99999999999874
No 49
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=100.00 E-value=1.5e-39 Score=315.43 Aligned_cols=280 Identities=14% Similarity=0.145 Sum_probs=221.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|||||||||||++|+++|+ +|++|++++|.. ..+.+|++|.++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~----------------------------------~~~~~D~~d~~~ 45 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS----------------------------------KEFCGDFSNPKG 45 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC----------------------------------SSSCCCTTCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc----------------------------------ccccccCCCHHH
Confidence 589999999999999999999 899999998742 134789999999
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-CCcCCc
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEGY 245 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~~~e~~ 245 (479)
+.++++..++|+|||+||......... ++...+++|+.|+.+++++|++.++ +|||+||.++||.... ++.|+
T Consensus 46 ~~~~~~~~~~d~vih~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~vy~~~~~~~~~E~- 119 (299)
T 1n2s_A 46 VAETVRKLRPDVIVNAAAHTAVDKAES---EPELAQLLNATSVEAIAKAANETGA--WVVHYSTDYVFPGTGDIPWQET- 119 (299)
T ss_dssp HHHHHHHHCCSEEEECCCCCCHHHHTT---CHHHHHHHHTHHHHHHHHHHTTTTC--EEEEEEEGGGSCCCTTCCBCTT-
T ss_pred HHHHHHhcCCCEEEECcccCCHhhhhc---CHHHHHHHHHHHHHHHHHHHHHcCC--cEEEEecccEEeCCCCCCCCCC-
Confidence 999998556999999999754322222 3456789999999999999998873 8999999999997654 55554
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
.+..|.+.|+.+|+++|++++.++ .+++++||+++|||+.. .++
T Consensus 120 -------------~~~~p~~~Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~-------------------~~~ 163 (299)
T 1n2s_A 120 -------------DATSPLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN-------------------NFA 163 (299)
T ss_dssp -------------SCCCCSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC-------------------CHH
T ss_pred -------------CCCCCccHHHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC-------------------cHH
Confidence 345668899999999999887653 48999999999999742 245
Q ss_pred HHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--C-CCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCC
Q 011706 326 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--Q-PGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGL 401 (479)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~-~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~ 401 (479)
..++..+..+.++.++++ +.++|+|++|+|++++.+++++. . .++ +||+++ +.+|+.|+++.+.+. +|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~--~~~i~~~~~~s~~e~~~~i~~~---~g~ 236 (299)
T 1n2s_A 164 KTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAG--LYHLVAGGTTTWHDYAALVFDE---ARK 236 (299)
T ss_dssp HHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCE--EEECCCBSCEEHHHHHHHHHHH---HHH
T ss_pred HHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCc--eEEEeCCCCCCHHHHHHHHHHH---hCC
Confidence 667777788888777754 78999999999999999998752 2 244 999999 679999999999998 444
Q ss_pred c------ceeeecCCC---CcccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHH
Q 011706 402 D------VKTISVPNP---RVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 402 ~------~~~~~~~~~---~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
+ +.+...+.. ........+.+|++|+++ |||+|+ +++++++++++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~ 295 (299)
T 1n2s_A 237 AGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFT 295 (299)
T ss_dssp HTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHS
T ss_pred CccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Confidence 3 233333321 111223456799999987 999998 899999999998864
No 50
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=2.2e-38 Score=339.74 Aligned_cols=321 Identities=19% Similarity=0.197 Sum_probs=240.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+|||||||||||++|+++|+++ |++|++++|...... .+ ....++.++.+|++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~--------------------~~--~~~~~v~~v~~Dl~ 370 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS--------------------RF--LNHPHFHFVEGDIS 370 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTG--------------------GG--TTCTTEEEEECCTT
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhh--------------------hh--ccCCceEEEECCCC
Confidence 46789999999999999999999998 899999998643210 00 01247899999999
Q ss_pred ChHH-HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC-C
Q 011706 163 DFEF-LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-D 240 (479)
Q Consensus 163 d~~~-~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-~ 240 (479)
|.++ ++++++ ++|+|||+||.........+ +...+++|+.|+.+++++|++.+ + +|||+||.++||.... +
T Consensus 371 d~~~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~---~~~~~~~Nv~gt~~ll~aa~~~~-~-r~V~~SS~~vyg~~~~~~ 443 (660)
T 1z7e_A 371 IHSEWIEYHVK--KCDVVLPLVAIATPIEYTRN---PLRVFELDFEENLRIIRYCVKYR-K-RIIFPSTSEVYGMCSDKY 443 (660)
T ss_dssp TCHHHHHHHHH--HCSEEEECCCCCCTHHHHHS---HHHHHHHHTHHHHHHHHHHHHTT-C-EEEEECCGGGGBTCCSSS
T ss_pred CcHHHHHHhhc--CCCEEEECceecCccccccC---HHHHHHhhhHHHHHHHHHHHHhC-C-EEEEEecHHHcCCCCCcc
Confidence 9765 778887 79999999997653322222 35678999999999999999988 5 9999999999987643 4
Q ss_pred CcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCc
Q 011706 241 IEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320 (479)
Q Consensus 241 ~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~ 320 (479)
+.|+...... . ....+.+.|+.+|+++|.+++.+++++|++++++||++||||+.++... . .. +
T Consensus 444 ~~E~~~~~~~------~-p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~--~---~~---~- 507 (660)
T 1z7e_A 444 FDEDHSNLIV------G-PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNA--A---RI---G- 507 (660)
T ss_dssp BCTTTCCEEE------C-CTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHH--H---TT---T-
T ss_pred cCCCcccccc------C-cccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCcccccc--c---cc---c-
Confidence 5554211000 0 0124567899999999999999988889999999999999998642100 0 00 0
Q ss_pred ccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--CCCCceEEEeCC-C-CcCHHHHHHHHHHHh
Q 011706 321 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--QPGEFRVFNQFT-E-QFSVNQLAALVTKAG 396 (479)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~ni~~-~-~~s~~el~~~i~~~~ 396 (479)
...++..++.++..+.++.+++++++.++|+|++|+|++++.+++++. ..+ ++||+++ + .+|+.|+++.+.+.
T Consensus 508 ~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g--~~~ni~~~~~~~s~~el~~~i~~~- 584 (660)
T 1z7e_A 508 SSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDG--EIINIGNPENEASIEELGEMLLAS- 584 (660)
T ss_dssp CSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTT--EEEEECCGGGEEEHHHHHHHHHHH-
T ss_pred ccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCC--eEEEECCCCCCcCHHHHHHHHHHH-
Confidence 023466788888889998888888899999999999999999998764 234 4999998 4 69999999999998
Q ss_pred hhcCCcceeeecCCCC-------------cccccccccCCchHHHH-cCCcccccHHHHHHHHHHHHHHhcc
Q 011706 397 EKLGLDVKTISVPNPR-------------VEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFAIQFKD 454 (479)
Q Consensus 397 ~~~g~~~~~~~~~~~~-------------~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 454 (479)
+|.+......+... .........+|++|+++ |||+|+++++++++++++|++...+
T Consensus 585 --~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 585 --FEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp --HHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred --hcCCCcccccCccccccchhccccccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 44322111111110 00122345689999987 9999999999999999999876543
No 51
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=100.00 E-value=2.2e-38 Score=312.94 Aligned_cols=318 Identities=14% Similarity=0.085 Sum_probs=229.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEE-Eccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELY-IGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~Dl 161 (479)
.+++|+||||||+||||++|+++|+++|++|++++|...... .....+....+.+++++ .+|+
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------~~~~~~~~~~~~~~~~~~~~D~ 71 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA----------------NLQKRWDAKYPGRFETAVVEDM 71 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH----------------HHHHHHHHHSTTTEEEEECSCT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH----------------HHHHHhhccCCCceEEEEecCC
Confidence 356889999999999999999999999999999998543210 00111111112468888 8999
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHH-cCCcceEEEeeccccccCCC--
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKE-FRQECHLVKLGTMGEYGTPN-- 238 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~-~g~~~~~V~~SS~~v~g~~~-- 238 (479)
+|.+++.++++ ++|+||||||..... .++..++++|+.|+.+++++|.+ .+++ +|||+||.++|+...
T Consensus 72 ~d~~~~~~~~~--~~d~vih~A~~~~~~------~~~~~~~~~n~~g~~~ll~~~~~~~~~~-~iv~~SS~~~~~~~~~~ 142 (342)
T 1y1p_A 72 LKQGAYDEVIK--GAAGVAHIASVVSFS------NKYDEVVTPAIGGTLNALRAAAATPSVK-RFVLTSSTVSALIPKPN 142 (342)
T ss_dssp TSTTTTTTTTT--TCSEEEECCCCCSCC------SCHHHHHHHHHHHHHHHHHHHHTCTTCC-EEEEECCGGGTCCCCTT
T ss_pred cChHHHHHHHc--CCCEEEEeCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHhCCCCc-EEEEeccHHHhcCCCCC
Confidence 99999999988 899999999975432 12356789999999999999985 5666 999999999986432
Q ss_pred ---CCCcCCceeecCCC--CCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh--CCceEEeecCeeecCCCCchhhhHhh
Q 011706 239 ---IDIEEGYITINHNG--RTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 239 ---~~~~e~~~~~~~~~--~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
.+++|+.+...... .......+..+.+.|+.+|+++|.+++.+++++ +++++++||++||||...+..
T Consensus 143 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~----- 217 (342)
T 1y1p_A 143 VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----- 217 (342)
T ss_dssp CCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT-----
T ss_pred CCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCC-----
Confidence 24445432100000 000000123456899999999999999999886 789999999999999865321
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHH
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAAL 391 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~ 391 (479)
. +..+..++..+..++++.+++++ +.++|+|++|+|++++.+++++...|+ .+.+.++.+|+.|+++.
T Consensus 218 ------~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~--~~~~~g~~~s~~e~~~~ 285 (342)
T 1y1p_A 218 ------Q---SGSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQIERR--RVYGTAGTFDWNTVLAT 285 (342)
T ss_dssp ------C---CCHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSC--EEEECCEEECHHHHHHH
T ss_pred ------C---CccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCcccCCc--eEEEeCCCCCHHHHHHH
Confidence 0 12567788888888887666665 678999999999999999987654454 44444467999999999
Q ss_pred HHHHhhhcCCcceeeecCCCCcccccccccCCchHHHH-cCC---cccccHHHHHHHHHHHH
Q 011706 392 VTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE-LGL---QPHILSDSLLDSLLNFA 449 (479)
Q Consensus 392 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~---~p~~~~~~~~~~~~~~~ 449 (479)
+.+. +|.. .+. .+.+.. ......+|++|+++ ||| .+.++++++++++++|+
T Consensus 286 i~~~---~~~~-~~~-~~~~~~--~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~ 340 (342)
T 1y1p_A 286 FRKL---YPSK-TFP-ADFPDQ--GQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340 (342)
T ss_dssp HHHH---CTTS-CCC-CCCCCC--CCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCS
T ss_pred HHHH---CCCc-cCC-CCCCcc--ccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHh
Confidence 9998 6653 111 111111 11235679999987 887 56679999999998875
No 52
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=100.00 E-value=7e-38 Score=309.06 Aligned_cols=312 Identities=14% Similarity=0.138 Sum_probs=213.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccC--CCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLT--GKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~ 162 (479)
++|+||||||+||||++|+++|+++|++|++++|..... .....+..+. ..+++++.+|++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~Dl~ 66 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV-----------------KKVKHLLDLPKAETHLTLWKADLA 66 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCH-----------------HHHHHHHTSTTHHHHEEEEECCTT
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchh-----------------HHHHHHHhcccCCCeEEEEEcCCC
Confidence 578999999999999999999999999999988753210 0000110111 125888999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccc-cccCCCC-
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMG-EYGTPNI- 239 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~-v~g~~~~- 239 (479)
|.+++.++++ ++|+|||+|+.... ...++ ...++++|+.|+.+++++|++.+ ++ +|||+||.+ +|+....
T Consensus 67 d~~~~~~~~~--~~d~Vih~A~~~~~--~~~~~--~~~~~~~nv~gt~~ll~a~~~~~~~~-riV~~SS~~~~~~~~~~~ 139 (337)
T 2c29_D 67 DEGSFDEAIK--GCTGVFHVATPMDF--ESKDP--ENEVIKPTIEGMLGIMKSCAAAKTVR-RLVFTSSAGTVNIQEHQL 139 (337)
T ss_dssp STTTTHHHHT--TCSEEEECCCCCCS--SCSSH--HHHTHHHHHHHHHHHHHHHHHHSCCC-EEEEECCGGGTSCSSSCC
T ss_pred CHHHHHHHHc--CCCEEEEeccccCC--CCCCh--HHHHHHHHHHHHHHHHHHHHhCCCcc-EEEEeeeHhhcccCCCCC
Confidence 9999999998 89999999986421 11121 13478999999999999999987 66 999999976 5554321
Q ss_pred -CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 240 -DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 240 -~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
+..|+.+.... .......+.+.|+.||+++|.+++.+++++|++++++||++||||+..+..
T Consensus 140 ~~~~E~~~~~~~-----~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~------------ 202 (337)
T 2c29_D 140 PVYDESCWSDME-----FCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSM------------ 202 (337)
T ss_dssp SEECTTCCCCHH-----HHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSC------------
T ss_pred cccCcccCCchh-----hhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC------------
Confidence 23333110000 000000135679999999999999988888999999999999999754310
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHHhhh
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEK 398 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~~~~ 398 (479)
...+...+ ....|... .++.+. ...|+|++|+|++++.+++++...+ .|+++++.+|+.|+++.+.+.
T Consensus 203 ---~~~~~~~~-~~~~g~~~-~~~~~~-~~~~i~v~Dva~a~~~~~~~~~~~~---~~~~~~~~~s~~e~~~~i~~~--- 270 (337)
T 2c29_D 203 ---PPSLITAL-SPITGNEA-HYSIIR-QGQFVHLDDLCNAHIYLFENPKAEG---RYICSSHDCIILDLAKMLREK--- 270 (337)
T ss_dssp ---CHHHHHHT-HHHHTCGG-GHHHHT-EEEEEEHHHHHHHHHHHHHCTTCCE---EEEECCEEEEHHHHHHHHHHH---
T ss_pred ---CchHHHHH-HHHcCCCc-cccccC-CCCEEEHHHHHHHHHHHhcCcccCc---eEEEeCCCCCHHHHHHHHHHH---
Confidence 11111111 11334332 222212 2459999999999999998754332 688877679999999999997
Q ss_pred cC-CcceeeecCCCCcccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHHh
Q 011706 399 LG-LDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 399 ~g-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
++ ..++....+. ......+.+|++|+++|||+|+++++++++++++|++..
T Consensus 271 ~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~ 322 (337)
T 2c29_D 271 YPEYNIPTEFKGV---DENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAK 322 (337)
T ss_dssp CTTSCCCSCCTTC---CTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCccCCCCCCcc---cCCCccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHc
Confidence 42 2222211111 112234568999996699999999999999999999763
No 53
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=100.00 E-value=1.2e-37 Score=300.20 Aligned_cols=266 Identities=14% Similarity=0.121 Sum_probs=208.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||| ||||++|+++|+++|++|++++|..... ..+ ...+++++.+|++|.+
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------------~~~---~~~~~~~~~~D~~d~~ 60 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM--------------------EAI---RASGAEPLLWPGEEPS 60 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH--------------------HHH---HHTTEEEEESSSSCCC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh--------------------hhH---hhCCCeEEEecccccc
Confidence 579999998 9999999999999999999999864321 011 1147899999999954
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHH--cCCcceEEEeeccccccCCCC-CCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKE--FRQECHLVKLGTMGEYGTPNI-DIE 242 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~--~g~~~~~V~~SS~~v~g~~~~-~~~ 242 (479)
+. ++|+|||+|+..... ...+.++++++++ .+++ +|||+||.++||.... ++.
T Consensus 61 -----~~--~~d~vi~~a~~~~~~----------------~~~~~~l~~a~~~~~~~~~-~~v~~Ss~~vyg~~~~~~~~ 116 (286)
T 3ius_A 61 -----LD--GVTHLLISTAPDSGG----------------DPVLAALGDQIAARAAQFR-WVGYLSTTAVYGDHDGAWVD 116 (286)
T ss_dssp -----CT--TCCEEEECCCCBTTB----------------CHHHHHHHHHHHHTGGGCS-EEEEEEEGGGGCCCTTCEEC
T ss_pred -----cC--CCCEEEECCCccccc----------------cHHHHHHHHHHHhhcCCce-EEEEeecceecCCCCCCCcC
Confidence 55 899999999864311 1235789999988 6777 9999999999998754 555
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+ .+..|.+.|+.+|+++|++++.+ .+++++++||+++|||+...
T Consensus 117 E~--------------~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~------------------ 161 (286)
T 3ius_A 117 ET--------------TPLTPTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP------------------ 161 (286)
T ss_dssp TT--------------SCCCCCSHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS------------------
T ss_pred CC--------------CCCCCCCHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchH------------------
Confidence 55 35567899999999999998876 59999999999999997532
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGL 401 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~ 401 (479)
+..+..+..+.+.++ .+.++|+|++|+|++++.+++++. .++ +||+++ +.+|+.|+++.+.+. +|.
T Consensus 162 ------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~--~~~i~~~~~~s~~e~~~~i~~~---~g~ 228 (286)
T 3ius_A 162 ------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGA--VYNVCDDEPVPPQDVIAYAAEL---QGL 228 (286)
T ss_dssp ------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTC--EEEECCSCCBCHHHHHHHHHHH---HTC
T ss_pred ------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCC--EEEEeCCCCccHHHHHHHHHHH---cCC
Confidence 223456777777665 578899999999999999999876 454 999998 679999999999998 777
Q ss_pred cceeeec--CCCCccc----ccccccCCchHHHH-cCCcccc-cHHHHHHHHHH
Q 011706 402 DVKTISV--PNPRVEA----EEHYYNAKHTKLIE-LGLQPHI-LSDSLLDSLLN 447 (479)
Q Consensus 402 ~~~~~~~--~~~~~~~----~~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~ 447 (479)
+.+.... +...... ......+|++|+++ |||+|++ +++++++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~ 282 (286)
T 3ius_A 229 PLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQA 282 (286)
T ss_dssp CCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHH
T ss_pred CCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHH
Confidence 6543221 1111111 12455689999988 9999999 79999999876
No 54
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=100.00 E-value=4.5e-38 Score=310.51 Aligned_cols=310 Identities=13% Similarity=0.101 Sum_probs=210.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+||||++|+++|+++|++|++++|....... . ..+..+. ...++.++.+|++|++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~-------------~-~~~~~~~--~~~~~~~~~~Dl~d~~ 72 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-------------V-SHLLELQ--ELGDLKIFRADLTDEL 72 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTT-------------T-HHHHHHG--GGSCEEEEECCTTTSS
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhh-------------H-HHHHhcC--CCCcEEEEecCCCChH
Confidence 6899999999999999999999999999998874321000 0 0000111 1246889999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccc-cccCCC----C
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMG-EYGTPN----I 239 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~-v~g~~~----~ 239 (479)
++.++++ ++|+|||+||.... ...++ ...++++|+.|+.+++++|++.+ ++ +|||+||.+ +|+.+. .
T Consensus 73 ~~~~~~~--~~D~Vih~A~~~~~--~~~~~--~~~~~~~nv~gt~~ll~aa~~~~~v~-r~V~~SS~~~~~~~~~~~~~~ 145 (338)
T 2rh8_A 73 SFEAPIA--GCDFVFHVATPVHF--ASEDP--ENDMIKPAIQGVVNVMKACTRAKSVK-RVILTSSAAAVTINQLDGTGL 145 (338)
T ss_dssp SSHHHHT--TCSEEEEESSCCCC-------------CHHHHHHHHHHHHHHHHCTTCC-EEEEECCHHHHHHHHHTCSCC
T ss_pred HHHHHHc--CCCEEEEeCCccCC--CCCCc--HHHHHHHHHHHHHHHHHHHHHcCCcC-EEEEEecHHHeecCCcCCCCc
Confidence 9999998 89999999986432 11122 12367899999999999999986 76 999999976 454321 1
Q ss_pred CCcCCceeecCCCCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
+++|+.+... ....+..+ ...|+.||.++|.+++.+++++|++++++||++||||+..+..
T Consensus 146 ~~~E~~~~~~------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~------------ 207 (338)
T 2rh8_A 146 VVDEKNWTDI------EFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDV------------ 207 (338)
T ss_dssp CCCTTTTTCC-------------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSC------------
T ss_pred ccChhhccch------hhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC------------
Confidence 3444421100 00001111 2269999999999999988888999999999999999864310
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCC------CceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHH
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKG------GQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALV 392 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i 392 (479)
...+.. +.....|.+. .++.. ...++|+|++|+|++++.+++++...+ .||++++.+|+.|+++.+
T Consensus 208 ---~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~---~~~~~~~~~s~~e~~~~l 279 (338)
T 2rh8_A 208 ---PSSIGL-AMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASG---RYICCAANTSVPELAKFL 279 (338)
T ss_dssp ---CHHHHH-HHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCE---EEEECSEEECHHHHHHHH
T ss_pred ---CchHHH-HHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCCcCC---cEEEecCCCCHHHHHHHH
Confidence 111111 1122344322 11111 122489999999999999998754432 789887679999999999
Q ss_pred HHHhhhcC-CcceeeecCCCCcccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHH
Q 011706 393 TKAGEKLG-LDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 393 ~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
.+. .+ .+++....+. . ......+|++|+++|||+|+++++|+++++++|++.
T Consensus 280 ~~~---~~~~~~~~~~~~~---~-~~~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~ 332 (338)
T 2rh8_A 280 SKR---YPQYKVPTDFGDF---P-PKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKA 332 (338)
T ss_dssp HHH---CTTSCCCCCCTTS---C-SSCSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred HHh---CCCCCCCCCCCCC---C-cCcceeechHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 987 43 2222111111 0 111257899999779999999999999999999875
No 55
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=100.00 E-value=6.6e-37 Score=299.94 Aligned_cols=311 Identities=14% Similarity=0.170 Sum_probs=208.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec-ccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS-LIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
+|+|||||||||||++|+++|+++|++|++++| ....... . ..+..+.. ...++.++.+|++|+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-------~-------~~~~~~~~-~~~~~~~~~~Dl~d~ 65 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-------V-------SFLTNLPG-ASEKLHFFNADLSNP 65 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-------C-------HHHHTSTT-HHHHEEECCCCTTCG
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-------H-------HHHHhhhc-cCCceEEEecCCCCH
Confidence 579999999999999999999999999999887 3211000 0 00000000 012578889999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc-CCcceEEEeecccc-ccCCC--CC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF-RQECHLVKLGTMGE-YGTPN--ID 240 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-g~~~~~V~~SS~~v-~g~~~--~~ 240 (479)
+++.++++ ++|+|||+|+... ....++ ...++++|+.|+.+++++|++. +++ +|||+||.++ |+... .+
T Consensus 66 ~~~~~~~~--~~d~vih~A~~~~--~~~~~~--~~~~~~~nv~gt~~l~~aa~~~~~~~-~iV~~SS~~~~~~~~~~~~~ 138 (322)
T 2p4h_X 66 DSFAAAIE--GCVGIFHTASPID--FAVSEP--EEIVTKRTVDGALGILKACVNSKTVK-RFIYTSSGSAVSFNGKDKDV 138 (322)
T ss_dssp GGGHHHHT--TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCSSCC-EEEEEEEGGGTSCSSSCCSE
T ss_pred HHHHHHHc--CCCEEEEcCCccc--CCCCCh--HHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEeccHHHcccCCCCCee
Confidence 99999998 7999999997531 111121 2347899999999999999987 676 9999999764 44322 12
Q ss_pred CcCCceeecCCCCCCCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCC
Q 011706 241 IEEGYITINHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDG 319 (479)
Q Consensus 241 ~~e~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g 319 (479)
+.|+.+... + ...+..|.. .|+.||+++|.+++.+++++|++++++||++||||+..+..
T Consensus 139 ~~e~~~~~~-----~-~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~------------- 199 (322)
T 2p4h_X 139 LDESDWSDV-----D-LLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKL------------- 199 (322)
T ss_dssp ECTTCCCCH-----H-HHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSC-------------
T ss_pred cCCccccch-----h-hhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCC-------------
Confidence 333311000 0 000011222 69999999999999988888999999999999999754210
Q ss_pred cccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHHhhhc
Q 011706 320 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKL 399 (479)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~~~~~ 399 (479)
...+.. +.....|....+ +. ..++|+|++|+|++++.+++++...| .||++++.+|+.|+++.+.+. .
T Consensus 200 --~~~~~~-~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~~~g---~~~~~~~~~s~~e~~~~i~~~---~ 267 (322)
T 2p4h_X 200 --PDSIEK-ALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENSVPGG---RYNCSPFIVPIEEMSQLLSAK---Y 267 (322)
T ss_dssp --CHHHHH-HTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCCCCE---EEECCCEEEEHHHHHHHHHHH---C
T ss_pred --CchHHH-HHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcCCCC---CEEEcCCCCCHHHHHHHHHHh---C
Confidence 111111 222334443322 22 23489999999999999998754333 588655679999999999986 4
Q ss_pred C-CcceeeecCCCCcccccccccCCchHHHHcCCcccccHHHHHHHHHHHHHH
Q 011706 400 G-LDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 400 g-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
+ .+++........ . ....+.+|++|+++|||+|+++++++++++++|++.
T Consensus 268 ~~~~~~~~~~~~~~-~-~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~ 318 (322)
T 2p4h_X 268 PEYQILTVDELKEI-K-GARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKE 318 (322)
T ss_dssp TTSCCCCTTTTTTC-C-CEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCC-C-CCcceecccHHHHHhCCccCCCHHHHHHHHHHHHHh
Confidence 2 222211000000 1 113466899999779999999999999999999864
No 56
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=100.00 E-value=5.1e-37 Score=305.98 Aligned_cols=296 Identities=16% Similarity=0.129 Sum_probs=223.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-----CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKG-----YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G-----~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
+|+|||||||||||++|+++|+++| ++|++++|...... ....+++++.+|
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------------------------~~~~~~~~~~~D 56 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------------------------HEDNPINYVQCD 56 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------------------------CCSSCCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------------------------cccCceEEEEee
Confidence 4789999999999999999999999 99999998654210 012478899999
Q ss_pred cCChHHHHHHhhhcC-CCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc--CCcceEE-------Eeec
Q 011706 161 ICDFEFLSESFKSFE-PDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF--RQECHLV-------KLGT 230 (479)
Q Consensus 161 l~d~~~~~~~~~~~~-~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--g~~~~~V-------~~SS 230 (479)
++|.+++.++++..+ +|+|||+||... .+....+++|+.|+.+++++|++. +++ +|| |+||
T Consensus 57 l~d~~~~~~~~~~~~~~d~vih~a~~~~--------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-~~v~~~g~~i~~Ss 127 (364)
T 2v6g_A 57 ISDPDDSQAKLSPLTDVTHVFYVTWANR--------STEQENCEANSKMFRNVLDAVIPNCPNLK-HISLQTGRKHYMGP 127 (364)
T ss_dssp TTSHHHHHHHHTTCTTCCEEEECCCCCC--------SSHHHHHHHHHHHHHHHHHHHTTTCTTCC-EEEEECCTHHHHCC
T ss_pred cCCHHHHHHHHhcCCCCCEEEECCCCCc--------chHHHHHHHhHHHHHHHHHHHHHhccccc-eEEeccCceEEEec
Confidence 999999999998443 999999999642 123457899999999999999987 676 887 8999
Q ss_pred cccccCCC---CCCcCCceeecCCCCCCCCCCCCC-CCchhhhhhHHHHHHHHHHHHHhC-CceEEeecCeeecCCCCch
Q 011706 231 MGEYGTPN---IDIEEGYITINHNGRTDTLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAWG-IRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 231 ~~v~g~~~---~~~~e~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~~~E~~~~~~~~~~g-l~~~ivRp~~v~Gp~~~~~ 305 (479)
.++||... .++.|+. +.. +.+.| +.+|++++.++++++ ++++++||++||||+....
T Consensus 128 ~~vyg~~~~~~~~~~E~~--------------~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~ 189 (364)
T 2v6g_A 128 FESYGKIESHDPPYTEDL--------------PRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSM 189 (364)
T ss_dssp GGGTTTSCCCCSSBCTTS--------------CCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCS
T ss_pred hhhccccccCCCCCCccc--------------cCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcc
Confidence 99998752 3455541 212 24667 458999988887777 9999999999999986421
Q ss_pred hhhHhhhcccCCCCcccchHHHH-HHHH--hcCCCeEEecCCCc---eeccccHHHHHHHHHHHHhCCCCCCCceEEEeC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRF-CVQA--AVGHPLTVYGKGGQ---TRGYLDIRDTVQCVELAIANPAQPGEFRVFNQF 379 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~-~~~~--~~~~~~~~~~~~~~---~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~ 379 (479)
...++..+ +..+ ..|.++.+++++++ ..+++|++|+|++++.+++++...|+ +||++
T Consensus 190 ---------------~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~--~~ni~ 252 (364)
T 2v6g_A 190 ---------------MNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNE--AFNVS 252 (364)
T ss_dssp ---------------SCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTE--EEEEC
T ss_pred ---------------cchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCCCCc--eEEec
Confidence 01223332 3333 36777777777643 46778889999999999998654454 99999
Q ss_pred C-CCcCHHHHHHHHHHHhhhcCCcceee--ecCCC----------------------Cccccc------------cc-cc
Q 011706 380 T-EQFSVNQLAALVTKAGEKLGLDVKTI--SVPNP----------------------RVEAEE------------HY-YN 421 (479)
Q Consensus 380 ~-~~~s~~el~~~i~~~~~~~g~~~~~~--~~~~~----------------------~~~~~~------------~~-~~ 421 (479)
+ +.+|+.|+++.+.+. +|.+.... ..|.+ ...... .. +.
T Consensus 253 ~~~~~s~~e~~~~i~~~---~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (364)
T 2v6g_A 253 NGDVFKWKHFWKVLAEQ---FGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFL 329 (364)
T ss_dssp CSCCBCHHHHHHHHHHH---HTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCC
T ss_pred CCCcCCHHHHHHHHHHH---hCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhh
Confidence 9 579999999999998 77654433 22321 000001 33 57
Q ss_pred CCchHHHHcCCcccccHHHHHHHHHHHHHHh
Q 011706 422 AKHTKLIELGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 422 ~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
+|++|+++|||+|.++++++++++++|++..
T Consensus 330 ~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~ 360 (364)
T 2v6g_A 330 DSMNKSKEHGFLGFRNSKNAFISWIDKAKAY 360 (364)
T ss_dssp BCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred cchHHHHhcCCCCCCCHHHHHHHHHHHHHHc
Confidence 8999998899999999999999999998753
No 57
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=287.78 Aligned_cols=279 Identities=18% Similarity=0.160 Sum_probs=204.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|||||||||||++|+++|+++||+|+++.|.+.. .. +..| +.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------------------~~---~~~~----~~ 44 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------------------GR---ITWD----EL 44 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------------------TE---EEHH----HH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------------------Ce---eecc----hh
Confidence 689999999999999999999999999999875321 11 1222 22
Q ss_pred HHHHhhhcCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcCCc-ceEEEeeccccccCCCC-CCcC
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQE-CHLVKLGTMGEYGTPNI-DIEE 243 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~-~~~V~~SS~~v~g~~~~-~~~e 243 (479)
..+.++ ++|+|||+|+...... ...++.....+++.|+.+|.+++++++..+.+ .+||++||.++||.... +..|
T Consensus 45 ~~~~l~--~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E 122 (298)
T 4b4o_A 45 AASGLP--SCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDE 122 (298)
T ss_dssp HHHCCC--SCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCT
T ss_pred hHhhcc--CCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccc
Confidence 234455 7999999998532211 11122223456789999999999999988754 25899999999998765 4555
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+ .|..+.+.|+..|...|... .....+++++++||++||||+. .
T Consensus 123 ~--------------~p~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~--------------------~ 166 (298)
T 4b4o_A 123 D--------------SPGGDFDFFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGG--------------------G 166 (298)
T ss_dssp T--------------CCCSCSSHHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTS--------------------H
T ss_pred c--------------CCccccchhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCC--------------------C
Confidence 4 35566778888887777643 2334689999999999999973 2
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCc
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLD 402 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~ 402 (479)
.+..++.....+.. ..++++++.++||||+|+|++++.+++++...| +||+++ +++|+.|+++.+++. +|.+
T Consensus 167 ~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g---~yn~~~~~~~t~~e~~~~ia~~---lgrp 239 (298)
T 4b4o_A 167 AMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHVHG---VLNGVAPSSATNAEFAQTFGAA---LGRR 239 (298)
T ss_dssp HHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCE---EEEESCSCCCBHHHHHHHHHHH---HTCC
T ss_pred chhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCCCCC---eEEEECCCccCHHHHHHHHHHH---hCcC
Confidence 34555555555554 346888999999999999999999999876544 899999 789999999999998 7765
Q ss_pred ceeeecCCCCc---------ccccccccCCchHHHHcCCcccc-cHHHHHHHHHH
Q 011706 403 VKTISVPNPRV---------EAEEHYYNAKHTKLIELGLQPHI-LSDSLLDSLLN 447 (479)
Q Consensus 403 ~~~~~~~~~~~---------~~~~~~~~~d~~k~~~lG~~p~~-~~~~~~~~~~~ 447 (479)
.. ..+|.+.. ..........++|++++||++++ +++++++++++
T Consensus 240 ~~-~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~ 293 (298)
T 4b4o_A 240 AF-IPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAE 293 (298)
T ss_dssp CC-CCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHH
T ss_pred Cc-ccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 43 22332110 00112345678999999999998 89999999987
No 58
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=3.7e-35 Score=280.64 Aligned_cols=268 Identities=14% Similarity=0.084 Sum_probs=208.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|||||||||||++++++|++ |++|++++|.... . .+ +.+|++|+++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~----------------------~------~~---~~~Dl~~~~~ 48 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI----------------------Q------GG---YKLDLTDFPR 48 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC----------------------T------TC---EECCTTSHHH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC----------------------C------CC---ceeccCCHHH
Confidence 4799999999999999999994 8999999885320 0 12 7899999999
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCce
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYI 246 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~~ 246 (479)
+.++++..++|+||||||....... ..++...+++|+.++.+++++|++.+ .+|||+||.++|+....++.|+
T Consensus 49 ~~~~~~~~~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~--~~iv~~SS~~~~~~~~~~~~e~-- 121 (273)
T 2ggs_A 49 LEDFIIKKRPDVIINAAAMTDVDKC---EIEKEKAYKINAEAVRHIVRAGKVID--SYIVHISTDYVFDGEKGNYKEE-- 121 (273)
T ss_dssp HHHHHHHHCCSEEEECCCCCCHHHH---HHCHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEEEGGGSCSSSCSBCTT--
T ss_pred HHHHHHhcCCCEEEECCcccChhhh---hhCHHHHHHHhHHHHHHHHHHHHHhC--CeEEEEecceeEcCCCCCcCCC--
Confidence 9999985569999999997543211 22346678999999999999999877 3899999999998655455554
Q ss_pred eecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchHH
Q 011706 247 TINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALN 326 (479)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~ 326 (479)
.+..+.+.|+.+|+++|.+++. ++++++||+.|||+. .++.
T Consensus 122 ------------~~~~~~~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~~---------------------~~~~ 162 (273)
T 2ggs_A 122 ------------DIPNPINYYGLSKLLGETFALQ------DDSLIIRTSGIFRNK---------------------GFPI 162 (273)
T ss_dssp ------------SCCCCSSHHHHHHHHHHHHHCC------TTCEEEEECCCBSSS---------------------SHHH
T ss_pred ------------CCCCCCCHHHHHHHHHHHHHhC------CCeEEEecccccccc---------------------HHHH
Confidence 2445678999999999998865 678999999999832 2344
Q ss_pred HHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHHhhhcCCcceee
Q 011706 327 RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLDVKTI 406 (479)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~~~~~g~~~~~~ 406 (479)
.++..+..+.++.++++ .++++|++|+|++++.+++++. ++ +||++++.+|+.|+++.+.+. +|.+.++.
T Consensus 163 ~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g--~~~i~~~~~s~~e~~~~~~~~---~g~~~~~~ 232 (273)
T 2ggs_A 163 YVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TG--IIHVAGERISRFELALKIKEK---FNLPGEVK 232 (273)
T ss_dssp HHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CE--EEECCCCCEEHHHHHHHHHHH---TTCCSCEE
T ss_pred HHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CC--eEEECCCcccHHHHHHHHHHH---hCCChhhc
Confidence 55566677888777654 7899999999999999998753 33 899998679999999999998 88776544
Q ss_pred ecCCC--CcccccccccCCchHHHH-cCCcc-cccHHHHH
Q 011706 407 SVPNP--RVEAEEHYYNAKHTKLIE-LGLQP-HILSDSLL 442 (479)
Q Consensus 407 ~~~~~--~~~~~~~~~~~d~~k~~~-lG~~p-~~~~~~~~ 442 (479)
..... ..........+|++|+++ |||+| .+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 233 EVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp EESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred ccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 32111 111223456799999987 99999 57888764
No 59
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=100.00 E-value=3e-35 Score=306.35 Aligned_cols=282 Identities=17% Similarity=0.142 Sum_probs=203.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++|+++|+++|++|++++|.... ...+.+|+.+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~-------------------------------~~~v~~d~~~~- 194 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK-------------------------------PGKRFWDPLNP- 194 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------------------------TTCEECCTTSC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC-------------------------------ccceeecccch-
Confidence 7899999999999999999999999999999986431 12256777643
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHH-HHHcCCcceEEEeeccccccC-CC-CCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFA-MKEFRQECHLVKLGTMGEYGT-PN-IDIE 242 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~-a~~~g~~~~~V~~SS~~v~g~-~~-~~~~ 242 (479)
+.++++ ++|+|||+||..... .........++++|+.|+.+++++ +++.+++ +|||+||.++||. .. .++.
T Consensus 195 -~~~~l~--~~D~Vih~A~~~~~~--~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~-r~V~~SS~~vyg~~~~~~~~~ 268 (516)
T 3oh8_A 195 -ASDLLD--GADVLVHLAGEPIFG--RFNDSHKEAIRESRVLPTKFLAELVAESTQCT-TMISASAVGFYGHDRGDEILT 268 (516)
T ss_dssp -CTTTTT--TCSEEEECCCC-------CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCC-EEEEEEEGGGGCSEEEEEEEC
T ss_pred -hHHhcC--CCCEEEECCCCcccc--ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCC-EEEEeCcceEecCCCCCCccC
Confidence 345566 899999999975432 112223456789999999999999 5666666 9999999999983 32 2444
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+ .+ .+.+.|+.+|...|.++.. +...|++++++||++||||+.
T Consensus 269 E~--------------~~-~~~~~y~~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~-------------------- 312 (516)
T 3oh8_A 269 EE--------------SE-SGDDFLAEVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRG-------------------- 312 (516)
T ss_dssp TT--------------SC-CCSSHHHHHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTB--------------------
T ss_pred CC--------------CC-CCcChHHHHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCC--------------------
Confidence 54 12 2578899999999988654 456799999999999999973
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGL 401 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~ 401 (479)
.++..++..+..+.. .+++++++.++|+|++|+|++++.+++++...+ +||+++ +.+|+.|+++.+.+. +|.
T Consensus 313 ~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g---~~ni~~~~~~s~~el~~~i~~~---~g~ 385 (516)
T 3oh8_A 313 GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISG---PINAVAPNPVSNADMTKILATS---MHR 385 (516)
T ss_dssp SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCE---EEEESCSCCEEHHHHHHHTTC-------
T ss_pred ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcccCC---cEEEECCCCCCHHHHHHHHHHH---hCC
Confidence 234555555544444 356888899999999999999999999876443 899998 689999999999998 776
Q ss_pred cceeeecCCCC-----c-----ccccccccCCchHHHHcCCccccc-HHHHHHHHHHHH
Q 011706 402 DVKTISVPNPR-----V-----EAEEHYYNAKHTKLIELGLQPHIL-SDSLLDSLLNFA 449 (479)
Q Consensus 402 ~~~~~~~~~~~-----~-----~~~~~~~~~d~~k~~~lG~~p~~~-~~~~~~~~~~~~ 449 (479)
+. ....|... + ........++++|+++|||+|+++ ++++++++++..
T Consensus 386 ~~-~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 386 PA-FIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp ------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTCC
T ss_pred CC-CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCcc
Confidence 54 22233211 1 111233457889999999999995 999999998754
No 60
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=100.00 E-value=4.5e-34 Score=291.00 Aligned_cols=315 Identities=12% Similarity=0.106 Sum_probs=221.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhh-----cccCCCceeEEE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW-----KSLTGKNIELYI 158 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~v~ 158 (479)
..+|+|||||||||||++|+++|++.|++|++++|........ ..+.+.+..+ ......++.++.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~l~~~l~~~~~~~~~~~~~~~v~~v~ 136 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAW----------YKLMTNLNDYFSEETVEMMLSNIEVIV 136 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHH----------HHHHHHHHHHSCHHHHHHHHTTEEEEE
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHH----------HHHHHHHHHhccccccccccCceEEEe
Confidence 4578999999999999999999999999999999865421000 0011111111 111236899999
Q ss_pred cccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC
Q 011706 159 GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN 238 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~ 238 (479)
+|++|++.+. .+. ++|+||||||..... .++...+++|+.|+.+++++|++ +.+ +|||+||.++ |...
T Consensus 137 ~Dl~d~~~l~-~~~--~~d~Vih~A~~~~~~------~~~~~~~~~Nv~g~~~l~~aa~~-~~~-~~v~~SS~~~-G~~~ 204 (427)
T 4f6c_A 137 GDFECMDDVV-LPE--NMDTIIHAGARTDHF------GDDDEFEKVNVQGTVDVIRLAQQ-HHA-RLIYVSTISV-GTYF 204 (427)
T ss_dssp ECC---CCCC-CSS--CCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHH-TTC-EEEEEEEGGG-GSEE
T ss_pred CCCCCcccCC-CcC--CCCEEEECCcccCCC------CCHHHHHHHHHHHHHHHHHHHHh-cCC-cEEEECchHh-CCCc
Confidence 9999988787 444 899999999976422 22456789999999999999999 655 9999999988 5421
Q ss_pred ------CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhh
Q 011706 239 ------IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 239 ------~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
.++.|+. ...+..+.+.|+.+|+++|.+++.+++ .|++++++|||+||||......
T Consensus 205 ~~~~~~~~~~E~~-----------~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~------ 266 (427)
T 4f6c_A 205 DIDTEDVTFSEAD-----------VYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWH------ 266 (427)
T ss_dssp CSSCSCCEECTTC-----------SCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCC------
T ss_pred cCCCCCccccccc-----------cccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCcc------
Confidence 1333331 112244789999999999999998764 6999999999999999865321
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHH
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAAL 391 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~ 391 (479)
........+..++..+..++.++. ++++..++|+|++|+|++++.++..+. .++ +||+++ +++++.|+++.
T Consensus 267 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~-~g~--~~~l~~~~~~s~~el~~~ 338 (427)
T 4f6c_A 267 ----MRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT-PQI--IYHVLSPNKMPVKSLLEC 338 (427)
T ss_dssp ----CTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHHHHHTTSCC-CCS--EEEESCSCCEEHHHHHHH
T ss_pred ----ccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHHHHHHcCCC-CCC--EEEecCCCCCcHHHHHHH
Confidence 001112346677888888777655 345788999999999999999998876 555 999998 68999999999
Q ss_pred HHHHhhhcCCcceeeecCCCCc----------------ccccccccCCchHH----HHcCCcccccHHHHHHHHHHHHHH
Q 011706 392 VTKAGEKLGLDVKTISVPNPRV----------------EAEEHYYNAKHTKL----IELGLQPHILSDSLLDSLLNFAIQ 451 (479)
Q Consensus 392 i~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~~~~d~~k~----~~lG~~p~~~~~~~~~~~~~~~~~ 451 (479)
+.+ +| ++....+.+.. ........+|+++. +++||.+....++.++.+++|++.
T Consensus 339 i~~----~g--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~ 412 (427)
T 4f6c_A 339 VKR----KE--IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT 412 (427)
T ss_dssp HHS----SC--CEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred HHH----cC--CcccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 998 44 23222221100 00112344666654 458999887778899999998876
Q ss_pred h
Q 011706 452 F 452 (479)
Q Consensus 452 ~ 452 (479)
.
T Consensus 413 ~ 413 (427)
T 4f6c_A 413 I 413 (427)
T ss_dssp H
T ss_pred H
Confidence 4
No 61
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=100.00 E-value=1.1e-33 Score=279.62 Aligned_cols=238 Identities=16% Similarity=0.200 Sum_probs=194.7
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhC-CC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNK-GY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIG 159 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~-G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 159 (479)
..+++|+|||||||||||++|+++|+++ |+ +|++++|...... +.... +...++.++.+
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~----------------~~~~~---~~~~~v~~~~~ 77 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQS----------------EMAME---FNDPRMRFFIG 77 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHH----------------HHHHH---HCCTTEEEEEC
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHH----------------HHHHH---hcCCCEEEEEC
Confidence 4567899999999999999999999999 97 9999998543210 01111 12357899999
Q ss_pred ccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC
Q 011706 160 DICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~ 239 (479)
|++|.+++.++++ ++|+|||+||....+....++ ...+++|+.|+.+++++|.+.+++ +||++||...+
T Consensus 78 Dl~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~---~~~~~~Nv~gt~~l~~aa~~~~v~-~~V~~SS~~~~----- 146 (344)
T 2gn4_A 78 DVRDLERLNYALE--GVDICIHAAALKHVPIAEYNP---LECIKTNIMGASNVINACLKNAIS-QVIALSTDKAA----- 146 (344)
T ss_dssp CTTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSH---HHHHHHHHHHHHHHHHHHHHTTCS-EEEEECCGGGS-----
T ss_pred CCCCHHHHHHHHh--cCCEEEECCCCCCCCchhcCH---HHHHHHHHHHHHHHHHHHHhCCCC-EEEEecCCccC-----
Confidence 9999999999998 899999999976543333333 467899999999999999999987 99999996544
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhhhcccC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEELCNRLD 316 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~ 316 (479)
.|.+.|+.||+++|.+++.++++ .|++++++|||+||||+.
T Consensus 147 ----------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-------------- 190 (344)
T 2gn4_A 147 ----------------------NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-------------- 190 (344)
T ss_dssp ----------------------SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT--------------
T ss_pred ----------------------CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC--------------
Confidence 23579999999999999988764 579999999999999963
Q ss_pred CCCcccchHHHHHHHHhcCC-CeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHH
Q 011706 317 YDGVFGTALNRFCVQAAVGH-PLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKA 395 (479)
Q Consensus 317 ~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~ 395 (479)
.+++.++.++..|+ ++.+. ++...++|+|++|+|++++.+++++. .|+ +||+.++.+|+.|+++.+.+.
T Consensus 191 ------~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~--~~~~~~~~~s~~el~~~i~~~ 260 (344)
T 2gn4_A 191 ------SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGE--IFVPKIPSMKMTDLAKALAPN 260 (344)
T ss_dssp ------SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSC--EEEECCCEEEHHHHHHHHCTT
T ss_pred ------CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCC--EEecCCCcEEHHHHHHHHHHh
Confidence 34667778888888 77775 67788999999999999999998753 455 999988779999999999864
No 62
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=100.00 E-value=9.7e-34 Score=272.87 Aligned_cols=260 Identities=13% Similarity=0.135 Sum_probs=200.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC--CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
|+|||||||||||++++++|+++ |++|++++|..... ..+ ...+++++.+|++|+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------------~~l---~~~~~~~~~~D~~d~ 57 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA--------------------STL---ADQGVEVRHGDYNQP 57 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT--------------------HHH---HHTTCEEEECCTTCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH--------------------hHH---hhcCCeEEEeccCCH
Confidence 57999999999999999999999 99999999854311 000 014688999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEG 244 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~ 244 (479)
+++.++++ ++|+|||+|+... . -++|+.++.+++++|++.+++ +|||+||.++|..
T Consensus 58 ~~l~~~~~--~~d~vi~~a~~~~------~-------~~~n~~~~~~l~~a~~~~~~~-~~v~~Ss~~~~~~-------- 113 (287)
T 2jl1_A 58 ESLQKAFA--GVSKLLFISGPHY------D-------NTLLIVQHANVVKAARDAGVK-HIAYTGYAFAEES-------- 113 (287)
T ss_dssp HHHHHHTT--TCSEEEECCCCCS------C-------HHHHHHHHHHHHHHHHHTTCS-EEEEEEETTGGGC--------
T ss_pred HHHHHHHh--cCCEEEEcCCCCc------C-------chHHHHHHHHHHHHHHHcCCC-EEEEECCCCCCCC--------
Confidence 99999998 8999999998421 0 057999999999999999987 9999999877621
Q ss_pred ceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccch
Q 011706 245 YITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~ 324 (479)
...|+.+|..+|++++ +.|++++++||+.++|+...
T Consensus 114 -------------------~~~y~~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~--------------------- 149 (287)
T 2jl1_A 114 -------------------IIPLAHVHLATEYAIR----TTNIPYTFLRNALYTDFFVN--------------------- 149 (287)
T ss_dssp -------------------CSTHHHHHHHHHHHHH----HTTCCEEEEEECCBHHHHSS---------------------
T ss_pred -------------------CCchHHHHHHHHHHHH----HcCCCeEEEECCEeccccch---------------------
Confidence 1379999999999875 46999999999988876311
Q ss_pred HHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCcc
Q 011706 325 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLDV 403 (479)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~~ 403 (479)
.++......+.+. .+.++..++|+|++|+|++++.+++++...|+ +||+++ +.+|+.|+++.+.+. +|.++
T Consensus 150 --~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~--~~~i~~~~~~s~~e~~~~i~~~---~g~~~ 221 (287)
T 2jl1_A 150 --EGLRASTESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGHENK--TYNLVSNQPWTFDELAQILSEV---SGKKV 221 (287)
T ss_dssp --GGGHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTE--EEEECCSSCBCHHHHHHHHHHH---HSSCC
T ss_pred --hhHHHHhhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCCc--EEEecCCCcCCHHHHHHHHHHH---HCCcc
Confidence 1112222222332 45567788999999999999999987655554 999999 589999999999998 88887
Q ss_pred eeeecCCCC----------ccc------------ccccccCCchHHHH-cCCcccccHHHHHHHHHH
Q 011706 404 KTISVPNPR----------VEA------------EEHYYNAKHTKLIE-LGLQPHILSDSLLDSLLN 447 (479)
Q Consensus 404 ~~~~~~~~~----------~~~------------~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~ 447 (479)
++...+... ... ....+..|++++++ || |.++++|+++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 222 VHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp EEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred eEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 776655320 000 01234578899987 99 77899999998865
No 63
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-33 Score=285.32 Aligned_cols=291 Identities=12% Similarity=0.061 Sum_probs=200.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhC---CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNK---GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIG 159 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~---G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 159 (479)
..++|+|||||||||||++|+++|+++ |++|++++|..........-...+.. ...+....+......++.++.+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDS--GDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCS--SCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHh--cchhhhhhhhhhccCceEEEEe
Confidence 346899999999999999999999999 99999999865421100000000000 0000011122223468999999
Q ss_pred ccC------ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecccc
Q 011706 160 DIC------DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGE 233 (479)
Q Consensus 160 Dl~------d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v 233 (479)
|++ |.+.+.++++ ++|+||||||..+. ..+...+++|+.|+.+++++|++.+++ +|||+||.++
T Consensus 148 Dl~~~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~-------~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~~V~iSS~~v 217 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAE--TVDLIVDSAAMVNA-------FPYHELFGPNVAGTAELIRIALTTKLK-PFTYVSTADV 217 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHH--HCCEEEECCSSCSB-------SSCCEEHHHHHHHHHHHHHHHTSSSCC-CEEEEEEGGG
T ss_pred ECCCcccCCCHHHHHHHHc--CCCEEEECccccCC-------cCHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEEeehhh
Confidence 998 6678899988 79999999998654 123456899999999999999998887 9999999999
Q ss_pred ccCCCC-CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhh
Q 011706 234 YGTPNI-DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 234 ~g~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
|+.... ++.|+....... . ..+......+.|+.||+++|.+++.++++.|++++++||++|||+......
T Consensus 218 ~~~~~~~~~~E~~~~~p~~-~--~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~------ 288 (478)
T 4dqv_A 218 GAAIEPSAFTEDADIRVIS-P--TRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQ------ 288 (478)
T ss_dssp GTTSCTTTCCSSSCHHHHC-C--EEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSC------
T ss_pred cCccCCCCcCCcccccccC-c--ccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCc------
Confidence 987543 455542110000 0 000011223679999999999999999888999999999999998642100
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeE--EecC------CCceeccccHHHHHHHHHHHHhC----CCCCCCceEEEeCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLT--VYGK------GGQTRGYLDIRDTVQCVELAIAN----PAQPGEFRVFNQFT 380 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~v~v~Dva~a~~~~~~~----~~~~g~~~~~ni~~ 380 (479)
.-...++..++......+.++ +++. ++..++|+||+|+|++++.++.+ +...+ ++||+++
T Consensus 289 ------~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~--~~ynv~~ 360 (478)
T 4dqv_A 289 ------LNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGF--ATYHVMN 360 (478)
T ss_dssp ------CCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSE--EEEEESC
T ss_pred ------CCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCC--ceEEecC
Confidence 001234455555544433222 1111 15678999999999999999986 33333 4999998
Q ss_pred -CC--cCHHHHHHHHHHHhhhcCCcceee
Q 011706 381 -EQ--FSVNQLAALVTKAGEKLGLDVKTI 406 (479)
Q Consensus 381 -~~--~s~~el~~~i~~~~~~~g~~~~~~ 406 (479)
+. +|+.|+++.+.+ .|.+++..
T Consensus 361 ~~~~~~s~~el~~~l~~----~g~~~~~i 385 (478)
T 4dqv_A 361 PHDDGIGLDEYVDWLIE----AGYPIRRI 385 (478)
T ss_dssp CCCSSCSHHHHHHHHHH----TTCSCEEE
T ss_pred CCCCCcCHHHHHHHHHH----cCCCcccC
Confidence 56 999999999998 56655443
No 64
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=100.00 E-value=8.2e-33 Score=278.62 Aligned_cols=248 Identities=15% Similarity=0.132 Sum_probs=200.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+||||||||+||++|+++|+++| ++|++++|....... +.+.+.......+.++.++.+|++
T Consensus 33 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------------~~~~l~~~~~~~~~~v~~~~~Dl~ 99 (399)
T 3nzo_A 33 VSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVE-------------LVRDIRSSFGYINGDFQTFALDIG 99 (399)
T ss_dssp HHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHH-------------HHHHHHHHTCCCSSEEEEECCCTT
T ss_pred hCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHH-------------HHHHHHHhcCCCCCcEEEEEEeCC
Confidence 357899999999999999999999999 799999986542211 111111111112358999999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIE 242 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~ 242 (479)
|++.+..+++..++|+|||+||..+.+ ...++.++...+++|+.|+.+++++|++.|++ +||++||..
T Consensus 100 d~~~~~~~~~~~~~D~Vih~Aa~~~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~-r~V~iSS~~---------- 167 (399)
T 3nzo_A 100 SIEYDAFIKADGQYDYVLNLSALKHVR-SEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAK-KYFCVSTDK---------- 167 (399)
T ss_dssp SHHHHHHHHHCCCCSEEEECCCCCCGG-GGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEECCSC----------
T ss_pred CHHHHHHHHHhCCCCEEEECCCcCCCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEeCCC----------
Confidence 999888888766899999999988775 56666666778999999999999999999988 999999942
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
+..|.+.|+.||+++|.+++.++.+ ++++++||++|||+. +
T Consensus 168 -----------------~~~p~~~Yg~sK~~~E~~~~~~~~~--~~~~~vR~g~v~G~~--------------------~ 208 (399)
T 3nzo_A 168 -----------------AANPVNMMGASKRIMEMFLMRKSEE--IAISTARFANVAFSD--------------------G 208 (399)
T ss_dssp -----------------SSCCCSHHHHHHHHHHHHHHHHTTT--SEEEEECCCEETTCT--------------------T
T ss_pred -----------------CCCCcCHHHHHHHHHHHHHHHHhhh--CCEEEeccceeeCCC--------------------C
Confidence 2345789999999999999988754 999999999999996 2
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CC---cCHHHHHHHHHHHhhh
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQ---FSVNQLAALVTKAGEK 398 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~---~s~~el~~~i~~~~~~ 398 (479)
.++..++.++..|+++.+++ +..++|+|++|+|++++.++..... |+ +|++.. ++ +|+.|+++.+.+.
T Consensus 209 ~~i~~~~~~i~~g~~~~~~g--d~~r~~v~v~D~a~~~~~a~~~~~~-g~--i~~l~~g~~~~~~s~~ela~~l~~~--- 280 (399)
T 3nzo_A 209 SLLHGFNQRIQKNQPIVAPN--DIKRYFVTPQESGELCLMSCIFGEN-RD--IFFPKLSEALHLISFADIAVKYLKQ--- 280 (399)
T ss_dssp SHHHHHHHHHHTTCCEEEES--SCEECEECHHHHHHHHHHHHHHCCT-TE--EEEECCCTTCCCEEHHHHHHHHHHH---
T ss_pred chHHHHHHHHHhCCCEecCC--CCeeccCCHHHHHHHHHHHhccCCC-CC--EEEecCCCCCCcccHHHHHHHHHHH---
Confidence 45788899999999988754 5778999999999999999987443 44 896654 55 9999999999998
Q ss_pred cCCcc
Q 011706 399 LGLDV 403 (479)
Q Consensus 399 ~g~~~ 403 (479)
+|.++
T Consensus 281 ~G~~~ 285 (399)
T 3nzo_A 281 LGYEP 285 (399)
T ss_dssp TTCEE
T ss_pred hCCCc
Confidence 78654
No 65
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=100.00 E-value=2.2e-33 Score=270.19 Aligned_cols=259 Identities=15% Similarity=0.103 Sum_probs=195.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhC--CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 88 RVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 88 ~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|||||||||||++++++|+++ |++|++++|..... ..+ ...++.++.+|++|++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------------~~~---~~~~~~~~~~D~~d~~ 57 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA--------------------QAL---AAQGITVRQADYGDEA 57 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC--------------------HHH---HHTTCEEEECCTTCHH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh--------------------hhh---hcCCCeEEEcCCCCHH
Confidence 4899999999999999999999 99999999854311 000 0136889999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGY 245 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~ 245 (479)
++.++++ ++|+|||+|+.. + ..|+.++.+++++|++.+++ +|||+||.++|..
T Consensus 58 ~~~~~~~--~~d~vi~~a~~~--------~-------~~~~~~~~~l~~a~~~~~~~-~~v~~Ss~~~~~~--------- 110 (286)
T 2zcu_A 58 ALTSALQ--GVEKLLLISSSE--------V-------GQRAPQHRNVINAAKAAGVK-FIAYTSLLHADTS--------- 110 (286)
T ss_dssp HHHHHTT--TCSEEEECC-----------------------CHHHHHHHHHHHHTCC-EEEEEEETTTTTC---------
T ss_pred HHHHHHh--CCCEEEEeCCCC--------c-------hHHHHHHHHHHHHHHHcCCC-EEEEECCCCCCCC---------
Confidence 9999998 899999999841 0 24889999999999999987 9999999877621
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
...|+.+|..+|.+++. .|++++++||+.++++..
T Consensus 111 ------------------~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~----------------------- 145 (286)
T 2zcu_A 111 ------------------PLGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYL----------------------- 145 (286)
T ss_dssp ------------------CSTTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH-----------------------
T ss_pred ------------------cchhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH-----------------------
Confidence 14799999999998753 699999999987665420
Q ss_pred HHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCcce
Q 011706 326 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLDVK 404 (479)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~~~ 404 (479)
.++.....++.+. ++++++.++|+|++|+|++++.+++++...|+ +||+++ +.+|+.|+++.+.+. +|.+++
T Consensus 146 -~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~--~~~i~~~~~~s~~e~~~~i~~~---~g~~~~ 218 (286)
T 2zcu_A 146 -ASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGK--VYELAGDSAWTLTQLAAELTKQ---SGKQVT 218 (286)
T ss_dssp -TTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTC--EEEECCSSCBCHHHHHHHHHHH---HSSCCE
T ss_pred -HHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCc--eEEEeCCCcCCHHHHHHHHHHH---HCCCCc
Confidence 1122333334443 56667889999999999999999998655565 999999 589999999999998 888777
Q ss_pred eeecCCCCc-------ccc---------------cccccCCchHHHH-cCCcccccHHHHHHHHHHHH
Q 011706 405 TISVPNPRV-------EAE---------------EHYYNAKHTKLIE-LGLQPHILSDSLLDSLLNFA 449 (479)
Q Consensus 405 ~~~~~~~~~-------~~~---------------~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~ 449 (479)
+...+.... ... ...+..|++++++ ||| |.++++|+++++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~ 285 (286)
T 2zcu_A 219 YQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNVN 285 (286)
T ss_dssp EEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC--
T ss_pred eeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCc-CCCCHHHHHHHHHhhc
Confidence 666553210 000 0124578899987 997 5569999999998876
No 66
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=100.00 E-value=2.7e-33 Score=291.44 Aligned_cols=314 Identities=12% Similarity=0.104 Sum_probs=221.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhh-----cccCCCceeEEEc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW-----KSLTGKNIELYIG 159 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~v~~ 159 (479)
.+|+|||||||||||++|+++|++.|++|++++|....... ...+.+.+..+ ......++.++.+
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~----------~~~l~~~l~~~~~~~~~~~~~~~v~~v~~ 218 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIA----------WYKLMTNLNDYFSEETVEMMLSNIEVIVG 218 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHH----------HHHHHHHHHHHSCHHHHHHHSTTEEEEEE
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHH----------HHHHHHHHHHhcccccchhccCceEEEec
Confidence 46899999999999999999999999999999986542100 00111111111 1122468999999
Q ss_pred ccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC-
Q 011706 160 DICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN- 238 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~- 238 (479)
|++|++.+. ++. ++|+||||||..+... ++...+++|+.|+.+++++|++ +.+ +|||+||.++ |...
T Consensus 219 Dl~d~~~l~-~~~--~~D~Vih~Aa~~~~~~------~~~~~~~~Nv~gt~~ll~~a~~-~~~-~~v~iSS~~v-G~~~~ 286 (508)
T 4f6l_B 219 DFECMDDVV-LPE--NMDTIIHAGARTDHFG------DDDEFEKVNVQGTVDVIRLAQQ-HHA-RLIYVSTISV-GTYFD 286 (508)
T ss_dssp BTTBCSSCC-CSS--CCSEEEECCCC--------------CCHHHHHHHHHHHHHHHHT-TTC-EEEEEEESCT-TSEEC
T ss_pred CCcccccCC-Ccc--CCCEEEECCceecCCC------CHHHHhhhHHHHHHHHHHHHHh-CCC-cEEEeCChhh-ccCCc
Confidence 999987777 444 8999999999764222 2345678999999999999998 555 9999999988 4321
Q ss_pred -----CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhc
Q 011706 239 -----IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCN 313 (479)
Q Consensus 239 -----~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~ 313 (479)
.++.|+.. ..+..+.+.|+.+|+++|.+++.+++ .|++++|+||++|||++....+
T Consensus 287 ~~~~~~~~~E~~~-----------~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~------- 347 (508)
T 4f6l_B 287 IDTEDVTFSEADV-----------YKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWH------- 347 (508)
T ss_dssp TTCSCCEECTTCS-----------CSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCC-------
T ss_pred cCCcCcccccccc-----------cccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcc-------
Confidence 13333311 11234689999999999999998764 6999999999999999864311
Q ss_pred ccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHHHHHHH
Q 011706 314 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQLAALV 392 (479)
Q Consensus 314 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~el~~~i 392 (479)
..+.....+..++.....++.++. +++++.++|+|++|+|++++.++.++. .++ +||+++ +.+++.|+++.+
T Consensus 348 ---~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai~~~~~~~~-~~~--~~nl~~~~~~s~~el~~~i 420 (508)
T 4f6l_B 348 ---MRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT-PQI--IYHVLSPNKMPVKSLLECV 420 (508)
T ss_dssp ---CTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHHHHHTTBCC-SCS--EEEESCSCEEEHHHHHHHH
T ss_pred ---cCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHHHHHHhCCC-CCC--EEEeCCCCCCCHHHHHHHH
Confidence 001112346677777777776654 345788999999999999999998876 455 999999 679999999999
Q ss_pred HHHhhhcCCcceeeecCCCCc----------------ccccccccCCchHH----HHcCCcccccHHHHHHHHHHHHHHh
Q 011706 393 TKAGEKLGLDVKTISVPNPRV----------------EAEEHYYNAKHTKL----IELGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 393 ~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~~~~d~~k~----~~lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
.+. + ++....+.+.. ........+|+++. +++||.+....++.++.+++|+...
T Consensus 421 ~~~----~--~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 421 KRK----E--IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp HSS----C--CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHc----C--CcccCHHHHHHHHHhcCCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 984 2 23222221110 01112344666654 5589999887789999999998875
No 67
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.9e-33 Score=259.20 Aligned_cols=223 Identities=14% Similarity=0.101 Sum_probs=173.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++|+++|+++|++|++++|....... + ..++.++.+|++|.+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------------------~-~~~~~~~~~Dl~d~~ 59 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-----------------------E-NEHLKVKKADVSSLD 59 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-----------------------C-CTTEEEECCCTTCHH
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-----------------------c-cCceEEEEecCCCHH
Confidence 5799999999999999999999999999999986542110 0 157899999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGY 245 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~ 245 (479)
++.++++ ++|+|||+||... .+ ...+++|+.++.+++++|++.+++ +|||+||.++|+.......|+
T Consensus 60 ~~~~~~~--~~d~vi~~a~~~~-----~~----~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~~~~- 126 (227)
T 3dhn_A 60 EVCEVCK--GADAVISAFNPGW-----NN----PDIYDETIKVYLTIIDGVKKAGVN-RFLMVGGAGSLFIAPGLRLMD- 126 (227)
T ss_dssp HHHHHHT--TCSEEEECCCC---------------CCSHHHHHHHHHHHHHHHTTCS-EEEEECCSTTSEEETTEEGGG-
T ss_pred HHHHHhc--CCCEEEEeCcCCC-----CC----hhHHHHHHHHHHHHHHHHHHhCCC-EEEEeCChhhccCCCCCcccc-
Confidence 9999999 8999999998531 11 125788999999999999999987 999999988765443322222
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
.+..|.+.|+.+|+++|.+++.++++.|++++++||++||||+.....
T Consensus 127 -------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~------------------- 174 (227)
T 3dhn_A 127 -------------SGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGR------------------- 174 (227)
T ss_dssp -------------TTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCC-------------------
T ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccccc-------------------
Confidence 244568899999999999999888778999999999999999764211
Q ss_pred HHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHH
Q 011706 326 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQ 387 (479)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~e 387 (479)
...+....+.. +.. ++|+|++|+|++++.+++++...|+ +||+++ ++.++.+
T Consensus 175 ------~~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~--~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 175 ------YRLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQE--RFTIGYLEHHHHHH 227 (227)
T ss_dssp ------CEEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSE--EEEEECCSCCC---
T ss_pred ------eeecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCc--EEEEEeehhcccCC
Confidence 11222222322 222 7999999999999999999888776 999999 7787753
No 68
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=100.00 E-value=6.2e-33 Score=277.15 Aligned_cols=251 Identities=14% Similarity=0.093 Sum_probs=200.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
|+|||||||||||++|+++|+++|+ +|+++|+. +|++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------------------~d~~ 38 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------------------TKEE 38 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------------------CCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------------------CCHH
Confidence 5899999999999999999999998 88876530 6788
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGY 245 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~ 245 (479)
++.++++ ++|+|||+||..... +....+++|+.++.+++++|++.+++++|||+||.++|+
T Consensus 39 ~l~~~~~--~~d~Vih~a~~~~~~-------~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------- 99 (369)
T 3st7_A 39 ELESALL--KADFIVHLAGVNRPE-------HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------- 99 (369)
T ss_dssp HHHHHHH--HCSEEEECCCSBCTT-------CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------
T ss_pred HHHHHhc--cCCEEEECCcCCCCC-------CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------
Confidence 8999998 799999999975421 234467899999999999999998766899999999885
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
.+.|+.+|+++|++++.+++++|++++++||+++|||+..+. +..++
T Consensus 100 ------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~---------------~~~~~ 146 (369)
T 3st7_A 100 ------------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN---------------YNSVI 146 (369)
T ss_dssp ------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT---------------SSCHH
T ss_pred ------------------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCC---------------cchHH
Confidence 368999999999999999999999999999999999987542 24567
Q ss_pred HHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCC-CCceEEEeCC-CCcCHHHHHHHHHHHhhhcCCcc
Q 011706 326 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQP-GEFRVFNQFT-EQFSVNQLAALVTKAGEKLGLDV 403 (479)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~-g~~~~~ni~~-~~~s~~el~~~i~~~~~~~g~~~ 403 (479)
..++..+..+.++.+ +++++.++|+|++|+|++++.+++++... ++ +||+++ +.+|+.|+++.+.+. +|.+.
T Consensus 147 ~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~--~~~i~~~~~~s~~e~~~~~~~~---~g~~~ 220 (369)
T 3st7_A 147 ATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENG--VPTVPNVFKVTLGEIVDLLYKF---KQSRL 220 (369)
T ss_dssp HHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETT--EECCSCCEEEEHHHHHHHHHHH---HHHHH
T ss_pred HHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCc--eEEeCCCCceeHHHHHHHHHHH---hCCCc
Confidence 888888888888766 46788999999999999999999987663 55 999998 579999999999998 66554
Q ss_pred eeeecCCCCcccccccccCCchHHHH-cCCcccccHHHHHHHH
Q 011706 404 KTISVPNPRVEAEEHYYNAKHTKLIE-LGLQPHILSDSLLDSL 445 (479)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~ 445 (479)
++...+.+. ......... |||.|...++..+...
T Consensus 221 ~~~~~~~~~--------~~~~~l~~~~l~~~p~~~~~~~l~~~ 255 (369)
T 3st7_A 221 DRTLPKLDN--------LFEKDLYSTYLSYLPSTDFSYPLLMN 255 (369)
T ss_dssp HTCCCCTTS--------HHHHHHHHHHHHTSCTTCSCCCCCEE
T ss_pred ccccCCCCC--------HHHHHHHHHHhcccCCcceeechhhc
Confidence 433211110 011122344 8899887665554443
No 69
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=99.98 E-value=7.1e-32 Score=257.20 Aligned_cols=235 Identities=18% Similarity=0.228 Sum_probs=186.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++|+++|+++|++|++++|..... ...++.++.+|++|++
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dl~d~~ 55 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA--------------------------AEAHEEIVACDLADAQ 55 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC--------------------------CCTTEEECCCCTTCHH
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc--------------------------cCCCccEEEccCCCHH
Confidence 46899999999999999999999999999998854310 0135788899999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC--CCCcC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN--IDIEE 243 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~--~~~~e 243 (479)
++.++++ ++|+||||||... ..++...+++|+.++.++++++++.+++ +|||+||..+|+... .++.|
T Consensus 56 ~~~~~~~--~~d~vi~~a~~~~-------~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~~~~~~~~~~~~~E 125 (267)
T 3ay3_A 56 AVHDLVK--DCDGIIHLGGVSV-------ERPWNDILQANIIGAYNLYEAARNLGKP-RIVFASSNHTIGYYPRTTRIDT 125 (267)
T ss_dssp HHHHHHT--TCSEEEECCSCCS-------CCCHHHHHHHTHHHHHHHHHHHHHTTCC-EEEEEEEGGGSTTSBTTSCBCT
T ss_pred HHHHHHc--CCCEEEECCcCCC-------CCCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeCCHHHhCCCCCCCCCCC
Confidence 9999998 7999999999641 1234567899999999999999998877 999999999998643 24555
Q ss_pred CceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 244 GYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
+ .+..+.+.|+.+|+++|.+++.+++++|++++++||+++|+...
T Consensus 126 ~--------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~--------------------- 170 (267)
T 3ay3_A 126 E--------------VPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK--------------------- 170 (267)
T ss_dssp T--------------SCCCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC---------------------
T ss_pred C--------------CCCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC---------------------
Confidence 4 34566789999999999999998888899999999999984210
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHHhhhcCCcc
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLDV 403 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~~~~~g~~~ 403 (479)
++...++|+|++|+|++++.+++++.... .+||+.++.
T Consensus 171 -------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~--~~~~~~~~~--------------------- 208 (267)
T 3ay3_A 171 -------------------DARMMATWLSVDDFMRLMKRAFVAPKLGC--TVVYGASAN--------------------- 208 (267)
T ss_dssp -------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCE--EEEEECCSC---------------------
T ss_pred -------------------CCCeeeccccHHHHHHHHHHHHhCCCCCc--eeEecCCCc---------------------
Confidence 11235689999999999999999765433 378765421
Q ss_pred eeeecCCCCcccccccccCCchHHHHcCCcccccHHHHHHHHHH
Q 011706 404 KTISVPNPRVEAEEHYYNAKHTKLIELGLQPHILSDSLLDSLLN 447 (479)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~ 447 (479)
.....|..+++.|||+|+++++++++.+.+
T Consensus 209 --------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 209 --------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp --------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred --------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 011246666644999999999999988764
No 70
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=99.97 E-value=4.3e-31 Score=251.77 Aligned_cols=204 Identities=17% Similarity=0.171 Sum_probs=170.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|+||||||+||||++++++|+++|++|++++|..... ...++.++.+|++|.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dl~d~ 55 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP--------------------------AGPNEECVQCDLADA 55 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC--------------------------CCTTEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc--------------------------cCCCCEEEEcCCCCH
Confidence 468999999999999999999999999999999864321 125789999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCC--CCCc
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN--IDIE 242 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~--~~~~ 242 (479)
+++.++++ ++|+||||||... ..++..++++|+.|+.+++++|++.+.+ +|||+||..+||... .++.
T Consensus 56 ~~~~~~~~--~~D~vi~~Ag~~~-------~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iv~~SS~~~~g~~~~~~~~~ 125 (267)
T 3rft_A 56 NAVNAMVA--GCDGIVHLGGISV-------EKPFEQILQGNIIGLYNLYEAARAHGQP-RIVFASSNHTIGYYPQTERLG 125 (267)
T ss_dssp HHHHHHHT--TCSEEEECCSCCS-------CCCHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEEEGGGGTTSBTTSCBC
T ss_pred HHHHHHHc--CCCEEEECCCCcC-------cCCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcchHHhCCCCCCCCCC
Confidence 99999999 8999999999732 2234678899999999999999999877 999999999997533 2444
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|+ .+..+.+.|+.||+++|.+++.+++++|++++++||+.|||+..+
T Consensus 126 e~--------------~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~------------------- 172 (267)
T 3rft_A 126 PD--------------VPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN------------------- 172 (267)
T ss_dssp TT--------------SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS-------------------
T ss_pred CC--------------CCCCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC-------------------
Confidence 43 355678999999999999999999999999999999999987422
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT 380 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~ 380 (479)
+...++|+|++|+++++..+++.+...+. ++++.+
T Consensus 173 ---------------------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~--~~~~~s 207 (267)
T 3rft_A 173 ---------------------YRMLSTWFSHDDFVSLIEAVFRAPVLGCP--VVWGAS 207 (267)
T ss_dssp ---------------------TTHHHHBCCHHHHHHHHHHHHHCSCCCSC--EEEECC
T ss_pred ---------------------CCceeeEEcHHHHHHHHHHHHhCCCCCce--EEEEeC
Confidence 23456889999999999999998766544 777766
No 71
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=99.97 E-value=3.3e-31 Score=262.28 Aligned_cols=285 Identities=15% Similarity=0.133 Sum_probs=203.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+.+|+|||||||||||++|+++|+++|++|++++|..... .+....+..+...+++++.+|++|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~----------------~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS----------------PSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC----------------HHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC----------------hhHHHHHHHHHhCCcEEEEeecCC
Confidence 3467899999999999999999999999999999865211 011111222223689999999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCCCCc
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIE 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~ 242 (479)
.+++.++++..++|+|||+|+. .|+.++.+++++|++.| ++ +||+ | +||.. ..
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~------------------~n~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~---~~ 125 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGG------------------ESILDQIALVKAMKAVGTIK-RFLP-S---EFGHD---VN 125 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCG------------------GGGGGHHHHHHHHHHHCCCS-EEEC-S---CCSSC---TT
T ss_pred HHHHHHHHhhCCCCEEEECCch------------------hhHHHHHHHHHHHHHcCCce-EEee-c---ccCCC---CC
Confidence 9999999997789999999984 38899999999999999 77 8886 4 35532 12
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|. .+..+.+.|+.+|+.+|++++. .|++++++||+.++|.....
T Consensus 126 e~--------------~~~~p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~------------------ 169 (346)
T 3i6i_A 126 RA--------------DPVEPGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYN------------------ 169 (346)
T ss_dssp TC--------------CCCTTHHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSC------------------
T ss_pred cc--------------CcCCCcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCcc------------------
Confidence 21 2445678999999999997754 69999999999999975321
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC--CCcCHHHHHHHHHHHhhhcC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT--EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~--~~~s~~el~~~i~~~~~~~g 400 (479)
.. ........++.+.++++++..++|+|++|+|++++.++.++...++ +||+.+ +.+|+.|+++.+.+. +|
T Consensus 170 -~~-~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~--~~~i~g~~~~~s~~e~~~~~~~~---~g 242 (346)
T 3i6i_A 170 -NI-HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNK--SVHFRPSCNCLNINELASVWEKK---IG 242 (346)
T ss_dssp -C------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTE--EEECCCGGGEECHHHHHHHHHHH---HT
T ss_pred -cc-ccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCe--EEEEeCCCCCCCHHHHHHHHHHH---HC
Confidence 01 1111223566788899999999999999999999999998765554 899974 579999999999998 88
Q ss_pred CcceeeecCCCCc-------cc--------------ccccccCCc-----hHHHH--cCCcccccHHHHHHHHHHHHHHh
Q 011706 401 LDVKTISVPNPRV-------EA--------------EEHYYNAKH-----TKLIE--LGLQPHILSDSLLDSLLNFAIQF 452 (479)
Q Consensus 401 ~~~~~~~~~~~~~-------~~--------------~~~~~~~d~-----~k~~~--lG~~p~~~~~~~~~~~~~~~~~~ 452 (479)
.++++...+.... .. ......++. ..+++ .+++|+ +++|.++.+++|+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~ 321 (346)
T 3i6i_A 243 RTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEK 321 (346)
T ss_dssp SCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC----
T ss_pred CCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhcc
Confidence 8877766553210 00 000001122 12333 456654 7999999988887664
Q ss_pred cc
Q 011706 453 KD 454 (479)
Q Consensus 453 ~~ 454 (479)
++
T Consensus 322 ~~ 323 (346)
T 3i6i_A 322 QP 323 (346)
T ss_dssp --
T ss_pred cc
Confidence 44
No 72
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=99.97 E-value=2.8e-31 Score=245.46 Aligned_cols=209 Identities=12% Similarity=0.146 Sum_probs=170.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC-hH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD-FE 165 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~ 165 (479)
|+|||||||||||++++++|+++|++|++++|....... . .+++++.+|++| ++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------------------~--~~~~~~~~D~~d~~~ 55 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-----------------------Y--NNVKAVHFDVDWTPE 55 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-----------------------C--TTEEEEECCTTSCHH
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-----------------------c--CCceEEEecccCCHH
Confidence 589999999999999999999999999999986542110 0 478999999999 99
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGY 245 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~ 245 (479)
++.++++ ++|+||||||... ...+++|+.++.+++++|++.+++ +||++||.++++.. +..|.
T Consensus 56 ~~~~~~~--~~d~vi~~ag~~~-----------~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~~~~~~--~~~e~- 118 (219)
T 3dqp_A 56 EMAKQLH--GMDAIINVSGSGG-----------KSLLKVDLYGAVKLMQAAEKAEVK-RFILLSTIFSLQPE--KWIGA- 118 (219)
T ss_dssp HHHTTTT--TCSEEEECCCCTT-----------SSCCCCCCHHHHHHHHHHHHTTCC-EEEEECCTTTTCGG--GCCSH-
T ss_pred HHHHHHc--CCCEEEECCcCCC-----------CCcEeEeHHHHHHHHHHHHHhCCC-EEEEECcccccCCC--ccccc-
Confidence 9999998 8999999999644 125688999999999999999987 99999997666422 22221
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
+..+.+.|+.+|+++|++++ +..|++++++||+.+||+.....
T Consensus 119 --------------~~~~~~~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~-------------------- 161 (219)
T 3dqp_A 119 --------------GFDALKDYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEATGL-------------------- 161 (219)
T ss_dssp --------------HHHHTHHHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSE--------------------
T ss_pred --------------ccccccHHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCc--------------------
Confidence 23457899999999999886 45799999999999999864311
Q ss_pred HHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHH
Q 011706 326 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAAL 391 (479)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~ 391 (479)
+. . +...+++++++|+|++++.+++++...++ +||++++..++.|+.+.
T Consensus 162 ------------~~-~--~~~~~~~i~~~Dva~~i~~~l~~~~~~g~--~~~i~~g~~~~~e~~~~ 210 (219)
T 3dqp_A 162 ------------ID-I--NDEVSASNTIGDVADTIKELVMTDHSIGK--VISMHNGKTAIKEALES 210 (219)
T ss_dssp ------------EE-E--SSSCCCCEEHHHHHHHHHHHHTCGGGTTE--EEEEEECSEEHHHHHHT
T ss_pred ------------cc-c--CCCcCCcccHHHHHHHHHHHHhCccccCc--EEEeCCCCccHHHHHHH
Confidence 11 1 25678999999999999999998765565 99998888999988764
No 73
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=99.97 E-value=2.3e-31 Score=248.85 Aligned_cols=218 Identities=14% Similarity=0.162 Sum_probs=170.4
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCce-eEEEcc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNI-ELYIGD 160 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~D 160 (479)
..+++|+|||||||||||++++++|+++|++|++++|..... ..+ ...++ .++.+|
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~--------------------~~~---~~~~~~~~~~~D 73 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG--------------------PEL---RERGASDIVVAN 73 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH--------------------HHH---HHTTCSEEEECC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH--------------------HHH---HhCCCceEEEcc
Confidence 346799999999999999999999999999999999864421 111 11367 899999
Q ss_pred cCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCC
Q 011706 161 ICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNID 240 (479)
Q Consensus 161 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~ 240 (479)
++ +.+.+++. ++|+||||||.... .++...+++|+.++.+++++|++.+++ +||++||.+.+..
T Consensus 74 l~--~~~~~~~~--~~D~vi~~ag~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~~~~~---- 137 (236)
T 3e8x_A 74 LE--EDFSHAFA--SIDAVVFAAGSGPH-------TGADKTILIDLWGAIKTIQEAEKRGIK-RFIMVSSVGTVDP---- 137 (236)
T ss_dssp TT--SCCGGGGT--TCSEEEECCCCCTT-------SCHHHHHHTTTHHHHHHHHHHHHHTCC-EEEEECCTTCSCG----
T ss_pred cH--HHHHHHHc--CCCEEEECCCCCCC-------CCccccchhhHHHHHHHHHHHHHcCCC-EEEEEecCCCCCC----
Confidence 99 67778887 89999999996431 234667899999999999999999987 9999999544321
Q ss_pred CcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCc
Q 011706 241 IEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320 (479)
Q Consensus 241 ~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~ 320 (479)
+. .+ .+.+.|+.+|+++|.+++ ..|++++++||+.+||+....
T Consensus 138 --~~--------------~~-~~~~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~---------------- 180 (236)
T 3e8x_A 138 --DQ--------------GP-MNMRHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTG---------------- 180 (236)
T ss_dssp --GG--------------SC-GGGHHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCS----------------
T ss_pred --CC--------------Ch-hhhhhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCC----------------
Confidence 10 01 347899999999999875 679999999999999986421
Q ss_pred ccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHH
Q 011706 321 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVT 393 (479)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~ 393 (479)
.+....++...++++|++|+|++++.+++++...|+ +||++++.+++.|+++.++
T Consensus 181 ----------------~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~--~~~v~~~~~~~~e~~~~i~ 235 (236)
T 3e8x_A 181 ----------------KVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGK--TFEVLNGDTPIAKVVEQLG 235 (236)
T ss_dssp ----------------EEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTE--EEEEEECSEEHHHHHHTC-
T ss_pred ----------------eEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCC--eEEEeCCCcCHHHHHHHhc
Confidence 122334445568999999999999999998765565 9999887899999998765
No 74
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=99.97 E-value=3e-29 Score=241.72 Aligned_cols=222 Identities=18% Similarity=0.205 Sum_probs=169.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
|+|||||||||||++++++|++. |++|++++|...... .+...+++++.+|++|++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~-----------------------~~~~~~v~~~~~D~~d~~ 57 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-----------------------DDWRGKVSVRQLDYFNQE 57 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC-----------------------GGGBTTBEEEECCTTCHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHH-----------------------HhhhCCCEEEEcCCCCHH
Confidence 57999999999999999999998 999999998654210 112257999999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGY 245 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~ 245 (479)
++.++++ ++|+|||+|+.... ...|+.++.+++++|++.|++ +|||+||.+. ..
T Consensus 58 ~l~~~~~--~~d~vi~~a~~~~~-------------~~~~~~~~~~l~~aa~~~gv~-~iv~~Ss~~~---~~------- 111 (289)
T 3e48_A 58 SMVEAFK--GMDTVVFIPSIIHP-------------SFKRIPEVENLVYAAKQSGVA-HIIFIGYYAD---QH------- 111 (289)
T ss_dssp HHHHHTT--TCSEEEECCCCCCS-------------HHHHHHHHHHHHHHHHHTTCC-EEEEEEESCC---ST-------
T ss_pred HHHHHHh--CCCEEEEeCCCCcc-------------chhhHHHHHHHHHHHHHcCCC-EEEEEcccCC---CC-------
Confidence 9999999 89999999985321 135899999999999999988 9999999432 11
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhh--HHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSK--VHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK--~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
...|..++ ..+|. +.++.|++++++||+.+||+.
T Consensus 112 ------------------~~~~~~~~~~~~~e~----~~~~~g~~~~ilrp~~~~~~~---------------------- 147 (289)
T 3e48_A 112 ------------------NNPFHMSPYFGYASR----LLSTSGIDYTYVRMAMYMDPL---------------------- 147 (289)
T ss_dssp ------------------TCCSTTHHHHHHHHH----HHHHHCCEEEEEEECEESTTH----------------------
T ss_pred ------------------CCCCccchhHHHHHH----HHHHcCCCEEEEecccccccc----------------------
Confidence 01122222 23343 334579999999999999973
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHHHhhhcCCcc
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLDV 403 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~~~~~~g~~~ 403 (479)
..++..+..+. ..+++.++..++|+|++|+|++++.++.++...|+ +||++++.+|+.|+++.+.+. +|.++
T Consensus 148 --~~~~~~~~~~~-~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~--~~~~~~~~~s~~e~~~~~~~~---~g~~~ 219 (289)
T 3e48_A 148 --KPYLPELMNMH-KLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGK--RYLLSGYSYDMKELAAILSEA---SGTEI 219 (289)
T ss_dssp --HHHHHHHHHHT-EECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTC--EEEECCEEEEHHHHHHHHHHH---HTSCC
T ss_pred --HHHHHHHHHCC-CEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCc--eEEeCCCcCCHHHHHHHHHHH---HCCce
Confidence 12233333333 23456678889999999999999999998766565 999995569999999999998 88877
Q ss_pred eeeecC
Q 011706 404 KTISVP 409 (479)
Q Consensus 404 ~~~~~~ 409 (479)
.+...+
T Consensus 220 ~~~~~~ 225 (289)
T 3e48_A 220 KYEPVS 225 (289)
T ss_dssp EECCCC
T ss_pred eEEeCC
Confidence 665544
No 75
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=99.96 E-value=2.8e-29 Score=236.66 Aligned_cols=234 Identities=16% Similarity=0.162 Sum_probs=171.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
++|+||||||+||||++++++|+++ |++|++++|..... ..+ ..++.++.+|++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~--------------------~~~----~~~~~~~~~D~~ 58 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK--------------------EKI----GGEADVFIGDIT 58 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH--------------------HHT----TCCTTEEECCTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch--------------------hhc----CCCeeEEEecCC
Confidence 5789999999999999999999999 89999999854311 111 246889999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCccc------ccccc----cccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPY------SMIDR----SRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~------~~~~~----~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~ 232 (479)
|.+++.++++ ++|+||||||...... ...++ +++...+++|+.++.++++++++.+.+ +||++||.+
T Consensus 59 d~~~~~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~ 135 (253)
T 1xq6_A 59 DADSINPAFQ--GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK-HIVVVGSMG 135 (253)
T ss_dssp SHHHHHHHHT--TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS-EEEEEEETT
T ss_pred CHHHHHHHHc--CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCC-EEEEEcCcc
Confidence 9999999998 7999999999753211 01111 122346789999999999999999887 999999987
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhh
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
++.... + ......+.|+.+|+++|.+++ ..|++++++||+.+||+......
T Consensus 136 ~~~~~~-~------------------~~~~~~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~------ 186 (253)
T 1xq6_A 136 GTNPDH-P------------------LNKLGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRE------ 186 (253)
T ss_dssp TTCTTC-G------------------GGGGGGCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSSC------
T ss_pred CCCCCC-c------------------cccccchhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchhh------
Confidence 652111 0 000112457789999999875 36999999999999999642100
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC----CcCHHHH
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE----QFSVNQL 388 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~----~~s~~el 388 (479)
...+....+++. ..+++|++|+|++++.+++++...++ +||++++ .+|+.|+
T Consensus 187 -------------------~~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~~~~~~g~--~~~i~~~~~~~~~s~~e~ 242 (253)
T 1xq6_A 187 -------------------LLVGKDDELLQT---DTKTVPRADVAEVCIQALLFEEAKNK--AFDLGSKPEGTSTPTKDF 242 (253)
T ss_dssp -------------------EEEESTTGGGGS---SCCEEEHHHHHHHHHHHTTCGGGTTE--EEEEEECCTTTSCCCCCH
T ss_pred -------------------hhccCCcCCcCC---CCcEEcHHHHHHHHHHHHcCccccCC--EEEecCCCcCCCCCHHHH
Confidence 000000011111 24689999999999999987654454 9999873 4899999
Q ss_pred HHHHHHHhhhcCC
Q 011706 389 AALVTKAGEKLGL 401 (479)
Q Consensus 389 ~~~i~~~~~~~g~ 401 (479)
++.+.+. +|.
T Consensus 243 ~~~~~~~---~g~ 252 (253)
T 1xq6_A 243 KALFSQV---TSR 252 (253)
T ss_dssp HHHHHTC---CCC
T ss_pred HHHHHHH---hCC
Confidence 9999987 664
No 76
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=99.96 E-value=9.8e-29 Score=228.26 Aligned_cols=216 Identities=14% Similarity=0.165 Sum_probs=145.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|||||||||||++|+++|+++|++|++++|..... ..+ . .+++++.+|++|+++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--------------------~~~---~-~~~~~~~~D~~d~~~ 56 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI--------------------TQT---H-KDINILQKDIFDLTL 56 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH--------------------HHH---C-SSSEEEECCGGGCCH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh--------------------hhc---c-CCCeEEeccccChhh
Confidence 5799999999999999999999999999999864321 111 1 478999999999987
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccc-cCCCC-CCcCC
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEY-GTPNI-DIEEG 244 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~-g~~~~-~~~e~ 244 (479)
+++. ++|+||||||.... ...+|+.++.+++++|++.+.+ +||++||.+.+ +.+.. +..|+
T Consensus 57 --~~~~--~~d~vi~~ag~~~~------------~~~~~~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~ 119 (221)
T 3ew7_A 57 --SDLS--DQNVVVDAYGISPD------------EAEKHVTSLDHLISVLNGTVSP-RLLVVGGAASLQIDEDGNTLLES 119 (221)
T ss_dssp --HHHT--TCSEEEECCCSSTT------------TTTSHHHHHHHHHHHHCSCCSS-EEEEECCCC--------------
T ss_pred --hhhc--CCCEEEECCcCCcc------------ccchHHHHHHHHHHHHHhcCCc-eEEEEecceEEEcCCCCcccccc
Confidence 6777 89999999996321 1367999999999999998877 99999997654 43322 22222
Q ss_pred ceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH-HhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 245 YITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCK-AWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
.+..+.+.|+.+|..+|.+. .+.+ ..|++++++||+.+|||+...
T Consensus 120 --------------~~~~~~~~y~~~k~~~e~~~-~~~~~~~gi~~~ivrp~~v~g~~~~~------------------- 165 (221)
T 3ew7_A 120 --------------KGLREAPYYPTARAQAKQLE-HLKSHQAEFSWTYISPSAMFEPGERT------------------- 165 (221)
T ss_dssp -------------------CCCSCCHHHHHHHHH-HHHTTTTTSCEEEEECSSCCCCC----------------------
T ss_pred --------------CCCCCHHHHHHHHHHHHHHH-HHHhhccCccEEEEeCcceecCCCcc-------------------
Confidence 23345678999999999973 3333 679999999999999994321
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHHH
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVNQ 387 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~e 387 (479)
..+ ...+..+.+.+++ .+++|++|+|++++.+++++...|+ +||+++ ...+..|
T Consensus 166 --~~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~--~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 166 --GDY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNE--HFTVAGKLEHHHHH 220 (221)
T ss_dssp --------------------------CCCHHHHHHHHHHHHHSCSCTTS--EEECCC--------
T ss_pred --Cce---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCC--EEEECCCCcccccc
Confidence 011 1123333344333 3689999999999999999888777 999998 5555443
No 77
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=99.96 E-value=8.9e-29 Score=229.18 Aligned_cols=216 Identities=10% Similarity=0.031 Sum_probs=157.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|||||||||||++|+++|+++|++|++++|..... ..+...+++++.+|++|+++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----------------------~~~~~~~~~~~~~D~~d~~~ 57 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA-----------------------ADRLGATVATLVKEPLVLTE 57 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-----------------------HHHTCTTSEEEECCGGGCCH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc-----------------------ccccCCCceEEecccccccH
Confidence 5799999999999999999999999999999864321 11123578999999999987
Q ss_pred HHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecccccc-CCCC---CCc
Q 011706 167 LSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYG-TPNI---DIE 242 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g-~~~~---~~~ 242 (479)
+++. ++|+||||||... .+ ....+|+.++.+++++|++.+ + +||++||.+.+. .... +..
T Consensus 58 --~~~~--~~d~vi~~ag~~~------~~----~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~~~~~~~~~~~~~~~ 121 (224)
T 3h2s_A 58 --ADLD--SVDAVVDALSVPW------GS----GRGYLHLDFATHLVSLLRNSD-T-LAVFILGSASLAMPGADHPMILD 121 (224)
T ss_dssp --HHHT--TCSEEEECCCCCT------TS----SCTHHHHHHHHHHHHTCTTCC-C-EEEEECCGGGSBCTTCSSCGGGG
T ss_pred --hhcc--cCCEEEECCccCC------Cc----chhhHHHHHHHHHHHHHHHcC-C-cEEEEecceeeccCCCCcccccc
Confidence 6777 8999999999751 11 124679999999999999998 6 999999975544 3322 112
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
|. ....+.+.|+.+|..+|.+ ..+.++.+++++++||+.+||++... + +.
T Consensus 122 ~~--------------~~~~~~~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~--------------~-~~ 171 (224)
T 3h2s_A 122 FP--------------ESAASQPWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPSGPAT--------------S-YV 171 (224)
T ss_dssp CC--------------GGGGGSTTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCCCCCC--------------C-EE
T ss_pred CC--------------CCCccchhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCCCccc--------------C-ce
Confidence 21 1223478899999999954 44555679999999999999995421 1 10
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcCHH
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFSVN 386 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s~~ 386 (479)
.....+.+ +...++++|++|+|++++.+++++...++ +|++++ +...+.
T Consensus 172 ----------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~--~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 172 ----------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRD--RIVVRDADLEHHH 221 (224)
T ss_dssp ----------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTS--EEEEEECC-----
T ss_pred ----------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCC--EEEEecCcchhcc
Confidence 11111111 23456899999999999999999888777 999998 554443
No 78
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.96 E-value=8.6e-29 Score=239.81 Aligned_cols=235 Identities=17% Similarity=0.115 Sum_probs=178.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
+|+||||||||+||++++++|+++| ++|++++|...... ...+ ...+++++.+|++|+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~------------------~~~l---~~~~~~~~~~D~~d~ 63 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA------------------AKEL---RLQGAEVVQGDQDDQ 63 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH------------------HHHH---HHTTCEEEECCTTCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH------------------HHHH---HHCCCEEEEecCCCH
Confidence 5799999999999999999999999 99999998643210 0011 114688999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEG 244 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~ 244 (479)
+++.++++ ++|+|||+|+.... . ..+.|+.++.+++++|++.|++ +||++|+.++|+...
T Consensus 64 ~~l~~~~~--~~d~vi~~a~~~~~----~-------~~~~~~~~~~~~~~aa~~~gv~-~iv~~S~~~~~~~~~------ 123 (299)
T 2wm3_A 64 VIMELALN--GAYATFIVTNYWES----C-------SQEQEVKQGKLLADLARRLGLH-YVVYSGLENIKKLTA------ 123 (299)
T ss_dssp HHHHHHHT--TCSEEEECCCHHHH----T-------CHHHHHHHHHHHHHHHHHHTCS-EEEECCCCCHHHHTT------
T ss_pred HHHHHHHh--cCCEEEEeCCCCcc----c-------cchHHHHHHHHHHHHHHHcCCC-EEEEEcCccccccCC------
Confidence 99999998 89999999984210 0 1356889999999999999988 999999888876321
Q ss_pred ceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccch
Q 011706 245 YITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~ 324 (479)
..+...|+.+|..+|.+++. .|++++++||+.+||+...
T Consensus 124 ----------------~~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~--------------------- 162 (299)
T 2wm3_A 124 ----------------GRLAAAHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLS--------------------- 162 (299)
T ss_dssp ----------------TSCCCHHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGT---------------------
T ss_pred ----------------CcccCchhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchh---------------------
Confidence 01246899999999998753 5999999999999997421
Q ss_pred HHHHHHH-HhcCCCeEE-ecCCCceeccccHHHHHHHHHHHHhCCC-CCCCceEEEeCCCCcCHHHHHHHHHHHhhhcCC
Q 011706 325 LNRFCVQ-AAVGHPLTV-YGKGGQTRGYLDIRDTVQCVELAIANPA-QPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGL 401 (479)
Q Consensus 325 ~~~~~~~-~~~~~~~~~-~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~~~ni~~~~~s~~el~~~i~~~~~~~g~ 401 (479)
.++.. ...++...+ .+.++..++|+|++|+|++++.++.++. ..|+ +||++++.+|+.|+++.+.+. +|.
T Consensus 163 --~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~--~~~~~g~~~s~~e~~~~~~~~---~g~ 235 (299)
T 2wm3_A 163 --HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQ--NIGLSTCRHTAEEYAALLTKH---TRK 235 (299)
T ss_dssp --TTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTC--EEECCSEEECHHHHHHHHHHH---HSS
T ss_pred --hcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCe--EEEeeeccCCHHHHHHHHHHH---HCC
Confidence 00111 112322222 3346678899999999999999998742 2455 999998779999999999998 888
Q ss_pred cceeeecC
Q 011706 402 DVKTISVP 409 (479)
Q Consensus 402 ~~~~~~~~ 409 (479)
++.+...+
T Consensus 236 ~~~~~~~~ 243 (299)
T 2wm3_A 236 VVHDAKMT 243 (299)
T ss_dssp CEEECCCC
T ss_pred CceeEecC
Confidence 77655444
No 79
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.95 E-value=1.2e-27 Score=236.94 Aligned_cols=235 Identities=16% Similarity=0.147 Sum_probs=177.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc-cCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD-ICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-l~d 163 (479)
.+|+|||||||||||++|+++|+++|++|++++|..... ....+.. ..+++++.+| ++|
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~------------------~~~~l~~--~~~v~~v~~D~l~d 63 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL------------------IAEELQA--IPNVTLFQGPLLNN 63 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH------------------HHHHHHT--STTEEEEESCCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh------------------hHHHHhh--cCCcEEEECCccCC
Confidence 367899999999999999999999999999999864321 0011111 1368899999 999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccc--cccCCCCC
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMG--EYGTPNID 240 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~--v~g~~~~~ 240 (479)
++++.++++ ++|+||||++... .+.|..+ .+++++|++.| ++ +|||+||.+ .|+.
T Consensus 64 ~~~l~~~~~--~~d~Vi~~a~~~~--------------~~~~~~~-~~l~~aa~~~g~v~-~~V~~SS~~~~~~~~---- 121 (352)
T 1xgk_A 64 VPLMDTLFE--GAHLAFINTTSQA--------------GDEIAIG-KDLADAAKRAGTIQ-HYIYSSMPDHSLYGP---- 121 (352)
T ss_dssp HHHHHHHHT--TCSEEEECCCSTT--------------SCHHHHH-HHHHHHHHHHSCCS-EEEEEECCCGGGTSS----
T ss_pred HHHHHHHHh--cCCEEEEcCCCCC--------------cHHHHHH-HHHHHHHHHcCCcc-EEEEeCCccccccCC----
Confidence 999999998 8999999987421 1347777 99999999998 87 999999964 3421
Q ss_pred CcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCc
Q 011706 241 IEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320 (479)
Q Consensus 241 ~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~ 320 (479)
.+.+.|+.+|+.+|++++. .|++++++||+ +||++....
T Consensus 122 ---------------------~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~--------------- 160 (352)
T 1xgk_A 122 ---------------------WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSL--------------- 160 (352)
T ss_dssp ---------------------CCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSS---------------
T ss_pred ---------------------CCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhc---------------
Confidence 1246799999999998865 48999999986 689864311
Q ss_pred ccchHHHHHH-H-HhcCCC-eEEecCCCceeccccH-HHHHHHHHHHHhCCCC--CCCceEEEeCCCCcCHHHHHHHHHH
Q 011706 321 FGTALNRFCV-Q-AAVGHP-LTVYGKGGQTRGYLDI-RDTVQCVELAIANPAQ--PGEFRVFNQFTEQFSVNQLAALVTK 394 (479)
Q Consensus 321 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~v~v-~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~~s~~el~~~i~~ 394 (479)
+. .++. . ...+.. +.+++++++.++++|+ +|+|++++.+++++.. .++ +||++++.+|+.|+++.+.+
T Consensus 161 ~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~--~~~l~~~~~s~~e~~~~i~~ 234 (352)
T 1xgk_A 161 PY----PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGH--RIALTFETLSPVQVCAAFSR 234 (352)
T ss_dssp SC----SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTC--EEEECSEEECHHHHHHHHHH
T ss_pred cc----ccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCe--EEEEecCCCCHHHHHHHHHH
Confidence 00 0010 0 112332 2346667788999999 8999999999986521 355 99999877999999999999
Q ss_pred HhhhcCCcceeeecCCC
Q 011706 395 AGEKLGLDVKTISVPNP 411 (479)
Q Consensus 395 ~~~~~g~~~~~~~~~~~ 411 (479)
. +|.++++...|.+
T Consensus 235 ~---~G~~~~~~~vp~~ 248 (352)
T 1xgk_A 235 A---LNRRVTYVQVPKV 248 (352)
T ss_dssp H---HTSCEEEEECSSC
T ss_pred H---HCCCCceEECCHH
Confidence 8 8988888777744
No 80
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.95 E-value=2.4e-26 Score=209.69 Aligned_cols=202 Identities=15% Similarity=0.159 Sum_probs=155.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||||+||++++++|+++|++|++++|...... .....+++++.+|++|++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~-----------------------~~~~~~~~~~~~D~~~~~ 59 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-----------------------SEGPRPAHVVVGDVLQAA 59 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-----------------------SSSCCCSEEEESCTTSHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc-----------------------cccCCceEEEEecCCCHH
Confidence 479999999999999999999999999999998643210 011257899999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCCc
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGY 245 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~~ 245 (479)
++.++++ ++|+|||+||.... .++ .++|+.++.++++++++.+++ +||++||.++|+....
T Consensus 60 ~~~~~~~--~~d~vi~~a~~~~~----~~~------~~~n~~~~~~~~~~~~~~~~~-~~v~~Ss~~~~~~~~~------ 120 (206)
T 1hdo_A 60 DVDKTVA--GQDAVIVLLGTRND----LSP------TTVMSEGARNIVAAMKAHGVD-KVVACTSAFLLWDPTK------ 120 (206)
T ss_dssp HHHHHHT--TCSEEEECCCCTTC----CSC------CCHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSCTTC------
T ss_pred HHHHHHc--CCCEEEECccCCCC----CCc------cchHHHHHHHHHHHHHHhCCC-eEEEEeeeeeccCccc------
Confidence 9999998 79999999996432 111 258999999999999999887 9999999999875421
Q ss_pred eeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchH
Q 011706 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTAL 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (479)
...+...|+.+|..+|.+++ ..+++++++||+.+ |++... +.+.
T Consensus 121 --------------~~~~~~~y~~~K~~~e~~~~----~~~i~~~~lrp~~~-~~~~~~--------------~~~~--- 164 (206)
T 1hdo_A 121 --------------VPPRLQAVTDDHIRMHKVLR----ESGLKYVAVMPPHI-GDQPLT--------------GAYT--- 164 (206)
T ss_dssp --------------SCGGGHHHHHHHHHHHHHHH----HTCSEEEEECCSEE-ECCCCC--------------SCCE---
T ss_pred --------------ccccchhHHHHHHHHHHHHH----hCCCCEEEEeCCcc-cCCCCC--------------cceE---
Confidence 00146889999999999873 46999999999997 443211 0000
Q ss_pred HHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 326 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
....+ ....+++|++|+|++++.+++++...|+ +||++++
T Consensus 165 -------------~~~~~-~~~~~~i~~~Dva~~~~~~~~~~~~~g~--~~~i~~g 204 (206)
T 1hdo_A 165 -------------VTLDG-RGPSRVISKHDLGHFMLRCLTTDEYDGH--STYPSHQ 204 (206)
T ss_dssp -------------EESSS-CSSCSEEEHHHHHHHHHHTTSCSTTTTC--EEEEECC
T ss_pred -------------ecccC-CCCCCccCHHHHHHHHHHHhcCcccccc--ceeeecc
Confidence 00111 1104899999999999999998765566 9999874
No 81
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.95 E-value=2.1e-27 Score=228.04 Aligned_cols=247 Identities=14% Similarity=0.033 Sum_probs=172.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... +......+.++.++.+|++|
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~--------------------~~~~~~~~~~~~~~~~Dv~~ 62 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL--------------------DDLVAAYPDRAEAISLDVTD 62 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG--------------------HHHHHHCTTTEEEEECCTTC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--------------------HHHHHhccCCceEEEeeCCC
Confidence 4578999999999999999999999999999999864321 11111123578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHH----HHHHcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLF----AMKEFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~----~a~~~g~~~~~V~~SS~~v 233 (479)
.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++ .+++.+.+ +||++||...
T Consensus 63 ~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-~iv~~sS~~~ 141 (281)
T 3m1a_A 63 GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG-SVVNISSFGG 141 (281)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEEcCccc
Confidence 99999888754 7999999999764322 233555677889999999555554 44666666 9999999655
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+.+.|+.||++.|.+++.++.+ +|+++++++||.|+++...+...
T Consensus 142 ~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--- 194 (281)
T 3m1a_A 142 QL------------------------SFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAA--- 194 (281)
T ss_dssp TC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCE---
T ss_pred cC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccccccccc---
Confidence 42 2345789999999999999999998 68999999999998875332100
Q ss_pred hhcccCCCCcccchHHHH--HHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC-CcCHHH
Q 011706 311 LCNRLDYDGVFGTALNRF--CVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE-QFSVNQ 387 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~-~~s~~e 387 (479)
............. ......+ .....+.+++|+|++++.+++++... . .|+++++ ...+.+
T Consensus 195 -----~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~~~~~~~~~-~--~~~l~s~~~~~i~g 257 (281)
T 3m1a_A 195 -----YFSEENPAYAEKVGPTRQLVQG---------SDGSQPGDPAKAAAAIRLALDTEKTP-L--RLALGGDAVDFLTG 257 (281)
T ss_dssp -----EECCBCTTTHHHHHHHHHHHHC--------------CBCHHHHHHHHHHHHHSSSCC-S--EEEESHHHHHHHHH
T ss_pred -----ccCCcchhhHHHhHHHHHHHhh---------ccCCCCCCHHHHHHHHHHHHhCCCCC-e--EEecCchHHHHHHH
Confidence 0000001111111 1111111 22346788999999999999987653 3 8999984 455566
Q ss_pred HHHHHHHH
Q 011706 388 LAALVTKA 395 (479)
Q Consensus 388 l~~~i~~~ 395 (479)
....+.+.
T Consensus 258 ~~~~i~~~ 265 (281)
T 3m1a_A 258 HLDSVRAE 265 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666554
No 82
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.95 E-value=2e-27 Score=231.54 Aligned_cols=239 Identities=17% Similarity=0.188 Sum_probs=176.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++++++|+++|++|++++|...... ++..+.+..+...+++++.+|++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---------------~~~~~~~~~~~~~~~~~~~~D~~d~~ 68 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---------------IDKVQMLLYFKQLGAKLIEASLDDHQ 68 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSC---------------HHHHHHHHHHHTTTCEEECCCSSCHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccc---------------hhHHHHHHHHHhCCeEEEeCCCCCHH
Confidence 578999999999999999999999999999998643110 01111111122357899999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCCCCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e~ 244 (479)
++.++++ ++|+|||+|+.... ..|+.++.+++++|++.| ++ +||+ | +||...... +
T Consensus 69 ~l~~~~~--~~d~vi~~a~~~~~--------------~~~~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~~~~-~- 125 (313)
T 1qyd_A 69 RLVDALK--QVDVVISALAGGVL--------------SHHILEQLKLVEAIKEAGNIK-RFLP-S---EFGMDPDIM-E- 125 (313)
T ss_dssp HHHHHHT--TCSEEEECCCCSSS--------------STTTTTHHHHHHHHHHSCCCS-EEEC-S---CCSSCTTSC-C-
T ss_pred HHHHHHh--CCCEEEECCccccc--------------hhhHHHHHHHHHHHHhcCCCc-eEEe-c---CCcCCcccc-c-
Confidence 9999998 89999999985321 237889999999999998 87 9985 3 455322110 0
Q ss_pred ceeecCCCCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 245 YITINHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
.+..| ...| .+|..+|++++ +.|++++++||+.++|+...
T Consensus 126 --------------~~~~p~~~~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~-------------------- 166 (313)
T 1qyd_A 126 --------------HALQPGSITF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAG-------------------- 166 (313)
T ss_dssp --------------CCCSSTTHHH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTT--------------------
T ss_pred --------------cCCCCCcchH-HHHHHHHHHHH----hcCCCeEEEEeceecccccc--------------------
Confidence 12122 4678 99999998774 46999999999998875321
Q ss_pred hHHHHHH----HHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC--CCcCHHHHHHHHHHHhh
Q 011706 324 ALNRFCV----QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT--EQFSVNQLAALVTKAGE 397 (479)
Q Consensus 324 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~--~~~s~~el~~~i~~~~~ 397 (479)
.+.. ....++.+.++++++..++|+|++|+|++++.++.++...++ +|++.+ +.+|+.|+++.+.+.
T Consensus 167 ---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~--~~~~~g~~~~~s~~e~~~~~~~~-- 239 (313)
T 1qyd_A 167 ---SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK--TMYIRPPMNILSQKEVIQIWERL-- 239 (313)
T ss_dssp ---TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSS--EEECCCGGGEEEHHHHHHHHHHH--
T ss_pred ---ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCc--eEEEeCCCCccCHHHHHHHHHHh--
Confidence 0000 012344556677888899999999999999999988755555 788765 469999999999998
Q ss_pred hcCCcceeeecC
Q 011706 398 KLGLDVKTISVP 409 (479)
Q Consensus 398 ~~g~~~~~~~~~ 409 (479)
+|.++++...+
T Consensus 240 -~g~~~~~~~~~ 250 (313)
T 1qyd_A 240 -SEQNLDKIYIS 250 (313)
T ss_dssp -HTCCCEECCBC
T ss_pred -cCCCCceEECC
Confidence 88887766554
No 83
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.95 E-value=1.8e-28 Score=225.59 Aligned_cols=199 Identities=13% Similarity=0.031 Sum_probs=154.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+|+||||||+||||++++++|+++|+ +|++++|.... ...++.++.+|++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------------------------~~~~~~~~~~D~~ 56 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------------------------EHPRLDNPVGPLA 56 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------------------------CCTTEECCBSCHH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------------------------cCCCceEEecccc
Confidence 467999999999999999999999998 99999875431 0146788899999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIE 242 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~ 242 (479)
|++++.+++ +|+||||||..... ..++...+++|+.++.+++++|++.+.+ +||++||.++|+.
T Consensus 57 ~~~~~~~~~----~d~vi~~a~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~------ 120 (215)
T 2a35_A 57 ELLPQLDGS----IDTAFCCLGTTIKE-----AGSEEAFRAVDFDLPLAVGKRALEMGAR-HYLVVSALGADAK------ 120 (215)
T ss_dssp HHGGGCCSC----CSEEEECCCCCHHH-----HSSHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEECCTTCCTT------
T ss_pred CHHHHHHhh----hcEEEECeeecccc-----CCCHHHHHHhhHHHHHHHHHHHHHcCCC-EEEEECCcccCCC------
Confidence 988777666 89999999964321 2234567899999999999999999887 9999999888753
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCc-eEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIR-ATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~-~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
+.+.|+.+|+++|.+++. .|++ ++++||+.+|||+....
T Consensus 121 --------------------~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~---------------- 160 (215)
T 2a35_A 121 --------------------SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR---------------- 160 (215)
T ss_dssp --------------------CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE----------------
T ss_pred --------------------CccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch----------------
Confidence 246899999999998764 5899 99999999999975421
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT 380 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~ 380 (479)
++ ..+. +...++ .+ ..++++|++|+|++++.+++++. + .+||+++
T Consensus 161 --~~----~~~~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~--~~~~i~~ 205 (215)
T 2a35_A 161 --LA----EILA-APIARI-LP--GKYHGIEACDLARALWRLALEEG--K--GVRFVES 205 (215)
T ss_dssp --GG----GGTT-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC--S--EEEEEEH
T ss_pred --HH----HHHH-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--C--CceEEcH
Confidence 11 1111 111222 22 26799999999999999999864 3 3999987
No 84
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.95 E-value=1.6e-26 Score=221.34 Aligned_cols=246 Identities=15% Similarity=0.077 Sum_probs=180.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+. ...++.++.+|++
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~--~~~~~~~~~~D~~ 74 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG----------------QKVCNNIG--SPDVISFVHCDVT 74 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHC--CTTTEEEEECCTT
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHH----------------HHHHHHhC--CCCceEEEECCCC
Confidence 46789999999999999999999999999999998754311 01111111 1127899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc---ccccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeec
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA---PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~---~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS 230 (479)
|+++++++++.. ++|+||||||.... +....+.+++...+++|+.|+.++++++... +.+ +||++||
T Consensus 75 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS 153 (278)
T 2bgk_A 75 KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG-SIVFTAS 153 (278)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE-EEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC-eEEEEee
Confidence 999998888743 69999999997542 1122344567788999999999999988763 445 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...|.... .+...|+.+|++.|.+++.++.+ +|++++++|||.|+++......
T Consensus 154 ~~~~~~~~-----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~- 209 (278)
T 2bgk_A 154 ISSFTAGE-----------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF- 209 (278)
T ss_dssp GGGTCCCT-----------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS-
T ss_pred ccccCCCC-----------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhc-
Confidence 87764321 13678999999999999999887 4899999999999999643210
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC-CcC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE-QFS 384 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~-~~s 384 (479)
.. ...+...+....+ .....+++++|+|++++.++..+.. .|+ +|++.++ .++
T Consensus 210 --------------~~-~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg~~~~ 265 (278)
T 2bgk_A 210 --------------GV-DSSRVEELAHQAA-------NLKGTLLRAEDVADAVAYLAGDESKYVSGL--NLVIDGGYTRT 265 (278)
T ss_dssp --------------SC-CHHHHHHHHHHTC-------SSCSCCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTGGGC
T ss_pred --------------cc-chhHHHHhhhccc-------ccccccCCHHHHHHHHHHHcCcccccCCCC--EEEECCccccc
Confidence 00 0111222211111 1234689999999999999975433 355 9999984 699
Q ss_pred HHHHHHHHHHH
Q 011706 385 VNQLAALVTKA 395 (479)
Q Consensus 385 ~~el~~~i~~~ 395 (479)
+.|+++.+.+.
T Consensus 266 ~~e~~~~i~~~ 276 (278)
T 2bgk_A 266 NPAFPTALKHG 276 (278)
T ss_dssp CTHHHHHSCSC
T ss_pred CCccchhhhhh
Confidence 99999887654
No 85
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.95 E-value=1.6e-26 Score=218.49 Aligned_cols=232 Identities=13% Similarity=0.064 Sum_probs=171.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||++++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~ 70 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA----------------NHVVDEIQQ-LGGQAFACRCDIT 70 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH----------------HHHHHHHHH-hCCceEEEEcCCC
Confidence 35789999999999999999999999999999999864321 111111211 1357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
|+++++++++.. ++|+||||||.........+.+++...+++|+.|+.++++++. +.+.+ +||++||...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~ 149 (255)
T 1fmc_A 71 SEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG-VILTITSMAA 149 (255)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcchhh
Confidence 999998888643 7999999999765432233455677889999999999999885 34555 9999999776
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+.. ..+...|+.+|++.|.+++.++.++ |++++++|||.++++....
T Consensus 150 ~~~------------------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~------ 199 (255)
T 1fmc_A 150 ENK------------------------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS------ 199 (255)
T ss_dssp TCC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT------
T ss_pred cCC------------------------CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh------
Confidence 632 2346899999999999999998875 8999999999999874211
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC-CcCH
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE-QFSV 385 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~-~~s~ 385 (479)
.....+......+.+ ...+.+++|+|++++.++..+.. .|+ +||++++ .+|+
T Consensus 200 ------------~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg~~~s~ 254 (255)
T 1fmc_A 200 ------------VITPEIEQKMLQHTP---------IRRLGQPQDIANAALFLCSPAASWVSGQ--ILTVSGGGVQEL 254 (255)
T ss_dssp ------------TCCHHHHHHHHHTCS---------SCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTSCCCC
T ss_pred ------------ccChHHHHHHHhcCC---------cccCCCHHHHHHHHHHHhCCccccCCCc--EEEECCceeccC
Confidence 001223333333332 23578999999999999976433 355 9999984 4553
No 86
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.95 E-value=4.3e-27 Score=223.07 Aligned_cols=233 Identities=16% Similarity=0.093 Sum_probs=170.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+. .+.++.++.+|++|
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~----~~~~~~~~~~D~~~ 65 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERA----------------RQAAAE----IGPAAYAVQMDVTR 65 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHH----HCTTEEEEECCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHH----hCCCceEEEeeCCC
Confidence 5689999999999999999999999999999998854321 111111 13568899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++... +...+||++||...
T Consensus 66 ~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 145 (259)
T 4e6p_A 66 QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAG 145 (259)
T ss_dssp HHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhh
Confidence 99988888754 7999999999865433 23356678889999999999999988543 31239999999655
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +......|+.||++.+.+++.++.++ |+++++++||.|++|....
T Consensus 146 ~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~------ 195 (259)
T 4e6p_A 146 RR------------------------GEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG------ 195 (259)
T ss_dssp TS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH------
T ss_pred cc------------------------CCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh------
Confidence 42 22346889999999999999999886 8999999999999985321
Q ss_pred hhcccCCCCcccchHHHHHHHHhc---CCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAV---GHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
...++..... +.....+.+..+...+.+++|+|++++.++..... .|+ +|++.++.
T Consensus 196 --------------~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~--~i~vdgG~ 256 (259)
T 4e6p_A 196 --------------VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQ--TYNVDGGN 256 (259)
T ss_dssp --------------HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSC--EEEESTTS
T ss_pred --------------hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCC--EEEECcCh
Confidence 1111111111 11111122234456889999999999998865443 355 99998853
No 87
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.94 E-value=2.6e-26 Score=215.51 Aligned_cols=227 Identities=15% Similarity=0.069 Sum_probs=167.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||++++++|+++|++|++++|..... .+..+. . .++.++.+|++
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~---~--~~~~~~~~D~~ 62 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----------------VSLAKE---C--PGIEPVCVDLG 62 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHH---S--TTCEEEECCTT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHh---c--cCCCcEEecCC
Confidence 35689999999999999999999999999999999864321 011111 1 35677899999
Q ss_pred ChHHHHHHhhhc-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----C-CcceEEEeecccccc
Q 011706 163 DFEFLSESFKSF-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R-QECHLVKLGTMGEYG 235 (479)
Q Consensus 163 d~~~~~~~~~~~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g-~~~~~V~~SS~~v~g 235 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... + .+ +||++||...+.
T Consensus 63 ~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~-~iv~~sS~~~~~ 141 (244)
T 1cyd_A 63 DWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG-SIVNVSSMVAHV 141 (244)
T ss_dssp CHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE-EEEEECCGGGTS
T ss_pred CHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe-EEEEEcchhhcC
Confidence 999999999854 4899999999765322 22344567788999999999999888653 4 44 999999987664
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
. ..+...|+.+|++.|.+++.++++ .|++++++|||.++++......
T Consensus 142 ~------------------------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~------ 191 (244)
T 1cyd_A 142 T------------------------FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS------ 191 (244)
T ss_dssp C------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT------
T ss_pred C------------------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc------
Confidence 2 223678999999999999999988 4899999999999987421100
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
....++..+..+. ..+++++++|+|++++.++..+.....++++++.++
T Consensus 192 -----------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 240 (244)
T 1cyd_A 192 -----------ADPEFARKLKERH---------PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG 240 (244)
T ss_dssp -----------CCHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred -----------cCHHHHHHHHhcC---------CccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCC
Confidence 0012223333322 236899999999999999976543222238888775
No 88
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.94 E-value=2.8e-26 Score=217.38 Aligned_cols=216 Identities=17% Similarity=0.094 Sum_probs=168.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... ...++.++.+|++|
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dv~d 79 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------------------------ADPDIHTVAGDISK 79 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--------------------------SSTTEEEEESCTTS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------------------------ccCceEEEEccCCC
Confidence 4689999999999999999999999999999999854311 11368899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++ ++.+.+ +||++||...
T Consensus 80 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~ 158 (260)
T 3un1_A 80 PETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSG-HIVSITTSLV 158 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCTTT
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc-EEEEEechhh
Confidence 99998888754 7999999999865433 23356678889999999999999988 455555 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+... +..+...|+.||++.+.+++.++.++ |+++++++||.|++|.....
T Consensus 159 ~~~~----------------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----- 211 (260)
T 3un1_A 159 DQPM----------------------VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE----- 211 (260)
T ss_dssp TSCB----------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-----
T ss_pred ccCC----------------------CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-----
Confidence 4321 22346899999999999999999987 89999999999999864321
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
........ .....+.+++|+|++++.+.+.....|+ +|++.++
T Consensus 212 -----------------~~~~~~~~---------~p~~r~~~~~dva~av~~L~~~~~itG~--~i~vdGG 254 (260)
T 3un1_A 212 -----------------THSTLAGL---------HPVGRMGEIRDVVDAVLYLEHAGFITGE--ILHVDGG 254 (260)
T ss_dssp -----------------GHHHHHTT---------STTSSCBCHHHHHHHHHHHHHCTTCCSC--EEEESTT
T ss_pred -----------------HHHHHhcc---------CCCCCCcCHHHHHHHHHHhcccCCCCCc--EEEECCC
Confidence 01111111 2335678999999999999666555676 9999875
No 89
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.94 E-value=1.3e-26 Score=225.16 Aligned_cols=238 Identities=16% Similarity=0.170 Sum_probs=173.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhh-hhhhhhcccCCCceeEEEcccCCh
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIH-DRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
+|+||||||||+||++|+++|+++|++|++++|...... .+ +....+..+...+++++.+|++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~~~l~~~~v~~v~~D~~d~ 67 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAA--------------NPETKEELIDNYQSLGVILLEGDINDH 67 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSS--------------CHHHHHHHHHHHHHTTCEEEECCTTCH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccC--------------ChHHHHHHHHHHHhCCCEEEEeCCCCH
Confidence 678999999999999999999999999999998641000 00 011111111124789999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCCCCcC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEE 243 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e 243 (479)
+++.++++ ++|+|||+|+.. ++.++.+++++|++.| ++ +||+ | +||... .|
T Consensus 68 ~~l~~~~~--~~d~vi~~a~~~------------------~~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~---~~ 119 (307)
T 2gas_A 68 ETLVKAIK--QVDIVICAAGRL------------------LIEDQVKIIKAIKEAGNVK-KFFP-S---EFGLDV---DR 119 (307)
T ss_dssp HHHHHHHT--TCSEEEECSSSS------------------CGGGHHHHHHHHHHHCCCS-EEEC-S---CCSSCT---TS
T ss_pred HHHHHHHh--CCCEEEECCccc------------------ccccHHHHHHHHHhcCCce-EEee-c---ccccCc---cc
Confidence 99999999 899999999842 1457789999999998 87 9984 3 355321 11
Q ss_pred CceeecCCCCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 244 GYITINHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
. .+..| .+.| .+|..+|.+++ +.|++++++||+.++++....
T Consensus 120 ~--------------~~~~p~~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~------------------ 162 (307)
T 2gas_A 120 H--------------DAVEPVRQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRN------------------ 162 (307)
T ss_dssp C--------------CCCTTHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGG------------------
T ss_pred c--------------cCCCcchhHH-HHHHHHHHHHH----HcCCCeEEEEcceeecccccc------------------
Confidence 0 12223 4678 99999998774 469999999999988864210
Q ss_pred chHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC--CCcCHHHHHHHHHHHhhhcC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT--EQFSVNQLAALVTKAGEKLG 400 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~--~~~s~~el~~~i~~~~~~~g 400 (479)
+. ........++.+.++++++..++|+|++|+|++++.++.++...++ +|++.+ +.+|+.|+++.+.+. +|
T Consensus 163 -~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~--~~~~~~~~~~~s~~e~~~~~~~~---~g 235 (307)
T 2gas_A 163 -LA-QLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNK--AVHIRLPKNYLTQNEVIALWEKK---IG 235 (307)
T ss_dssp -TT-CTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTE--EEECCCGGGEEEHHHHHHHHHHH---HT
T ss_pred -cc-ccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCc--eEEEeCCCCcCCHHHHHHHHHHH---hC
Confidence 00 0000112344567778888889999999999999999987654444 788765 469999999999998 88
Q ss_pred CcceeeecC
Q 011706 401 LDVKTISVP 409 (479)
Q Consensus 401 ~~~~~~~~~ 409 (479)
.++++...+
T Consensus 236 ~~~~~~~~~ 244 (307)
T 2gas_A 236 KTLEKTYVS 244 (307)
T ss_dssp SCCEEEEEC
T ss_pred CCCceeecC
Confidence 887776655
No 90
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.94 E-value=9.8e-27 Score=227.61 Aligned_cols=234 Identities=15% Similarity=0.168 Sum_probs=174.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc-ccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI-RRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
+|+||||||||+||++++++|+++|++|++++|.. .... .+....+..+...+++++.+|++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------------~~~~~~l~~~~~~~v~~v~~D~~d~ 68 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDST---------------PSSVQLREEFRSMGVTIIEGEMEEH 68 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCC---------------HHHHHHHHHHHHTTCEEEECCTTCH
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccC---------------hHHHHHHHHhhcCCcEEEEecCCCH
Confidence 67899999999999999999999999999999864 2100 0011111111225789999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCCCCcC
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEE 243 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e 243 (479)
+++.++++ ++|+|||+|+.. ++.++.+++++|++.| ++ +||+ | +||... .|
T Consensus 69 ~~l~~a~~--~~d~vi~~a~~~------------------~~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~---~~ 120 (321)
T 3c1o_A 69 EKMVSVLK--QVDIVISALPFP------------------MISSQIHIINAIKAAGNIK-RFLP-S---DFGCEE---DR 120 (321)
T ss_dssp HHHHHHHT--TCSEEEECCCGG------------------GSGGGHHHHHHHHHHCCCC-EEEC-S---CCSSCG---GG
T ss_pred HHHHHHHc--CCCEEEECCCcc------------------chhhHHHHHHHHHHhCCcc-EEec-c---ccccCc---cc
Confidence 99999999 899999999842 2566789999999998 87 8883 3 355321 11
Q ss_pred CceeecCCCCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 244 GYITINHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
. .+..+ .+.| .+|..+|.+++ +.+++++++||+.++|+.
T Consensus 121 ~--------------~~~~p~~~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~--------------------- 160 (321)
T 3c1o_A 121 I--------------KPLPPFESVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYF--------------------- 160 (321)
T ss_dssp C--------------CCCHHHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHH---------------------
T ss_pred c--------------ccCCCcchHH-HHHHHHHHHHH----HcCCCeEEEEeceecccc---------------------
Confidence 1 11122 4578 99999998775 458999999999888752
Q ss_pred chHHHHHH---HHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC--CCcCHHHHHHHHHHHhh
Q 011706 323 TALNRFCV---QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT--EQFSVNQLAALVTKAGE 397 (479)
Q Consensus 323 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~--~~~s~~el~~~i~~~~~ 397 (479)
+..+.. ....++.+.++++++..++|+|++|+|++++.++.++...|+ +|++.+ +.+|+.|+++.+.+.
T Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~--~~~~~g~~~~~t~~e~~~~~~~~-- 234 (321)
T 3c1o_A 161 --VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNR--IVIYRPPKNIISQNELISLWEAK-- 234 (321)
T ss_dssp --HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTE--EEECCCGGGEEEHHHHHHHHHHH--
T ss_pred --ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCe--EEEEeCCCCcccHHHHHHHHHHH--
Confidence 122221 123455677888888899999999999999999998655554 888875 479999999999998
Q ss_pred hcCCcceeeecC
Q 011706 398 KLGLDVKTISVP 409 (479)
Q Consensus 398 ~~g~~~~~~~~~ 409 (479)
+|.++++...+
T Consensus 235 -~g~~~~~~~~~ 245 (321)
T 3c1o_A 235 -SGLSFKKVHMP 245 (321)
T ss_dssp -HTSCCCEEEEC
T ss_pred -cCCcceeeeCC
Confidence 88887766655
No 91
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.94 E-value=1e-26 Score=227.19 Aligned_cols=230 Identities=17% Similarity=0.163 Sum_probs=173.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+++||||||||+||++++++|+++|++|++++|..... .+.+.. +...+++++.+|++|++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~----------------~~~~~~---l~~~~v~~v~~Dl~d~~ 71 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK----------------TTLLDE---FQSLGAIIVKGELDEHE 71 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC----------------HHHHHH---HHHTTCEEEECCTTCHH
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch----------------hhHHHH---hhcCCCEEEEecCCCHH
Confidence 35899999999999999999999999999999864310 001111 11247899999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCCCCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e~ 244 (479)
++.++++ ++|+|||+|+.. ++.++.+++++|++.| ++ +||+ | +||... .|.
T Consensus 72 ~l~~a~~--~~d~vi~~a~~~------------------~~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~---~~~ 123 (318)
T 2r6j_A 72 KLVELMK--KVDVVISALAFP------------------QILDQFKILEAIKVAGNIK-RFLP-S---DFGVEE---DRI 123 (318)
T ss_dssp HHHHHHT--TCSEEEECCCGG------------------GSTTHHHHHHHHHHHCCCC-EEEC-S---CCSSCT---TTC
T ss_pred HHHHHHc--CCCEEEECCchh------------------hhHHHHHHHHHHHhcCCCC-EEEe-e---ccccCc---ccc
Confidence 9999999 899999999841 2557789999999998 77 8985 4 355321 110
Q ss_pred ceeecCCCCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 245 YITINHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
.+..| ...| .+|..+|.+++ +.|++++++||+.+++.
T Consensus 124 --------------~~~~p~~~~y-~sK~~~e~~~~----~~~~~~~~lr~~~~~~~----------------------- 161 (318)
T 2r6j_A 124 --------------NALPPFEALI-ERKRMIRRAIE----EANIPYTYVSANCFASY----------------------- 161 (318)
T ss_dssp --------------CCCHHHHHHH-HHHHHHHHHHH----HTTCCBEEEECCEEHHH-----------------------
T ss_pred --------------cCCCCcchhH-HHHHHHHHHHH----hcCCCeEEEEcceehhh-----------------------
Confidence 11122 3568 99999998774 46999999999887654
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC--CCcCHHHHHHHHHHHhhhcCC
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT--EQFSVNQLAALVTKAGEKLGL 401 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~--~~~s~~el~~~i~~~~~~~g~ 401 (479)
++..++.....++.+.++++++..++|+|++|++++++.++.++...++ +|++.+ +.+|+.|+++.+.+. +|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~--~~~~~g~~~~~s~~e~~~~~~~~---~g~ 236 (318)
T 2r6j_A 162 FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNR--VVIYRPSTNIITQLELISRWEKK---IGK 236 (318)
T ss_dssp HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTE--EEECCCGGGEEEHHHHHHHHHHH---HTC
T ss_pred hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCe--EEEecCCCCccCHHHHHHHHHHH---hCC
Confidence 1223333334556677888888899999999999999999987654444 788764 469999999999998 888
Q ss_pred cceeeecC
Q 011706 402 DVKTISVP 409 (479)
Q Consensus 402 ~~~~~~~~ 409 (479)
++++...+
T Consensus 237 ~~~~~~~~ 244 (318)
T 2r6j_A 237 KFKKIHVP 244 (318)
T ss_dssp CCEEEEEC
T ss_pred CCceeecC
Confidence 88776655
No 92
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.94 E-value=3e-26 Score=214.77 Aligned_cols=207 Identities=14% Similarity=0.073 Sum_probs=156.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
++|+||||||+||||++++++|+++|+ +|++++|....... ....++.++.+|++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~-----------------------~~~~~~~~~~~D~~ 73 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----------------------EAYKNVNQEVVDFE 73 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----------------------GGGGGCEEEECCGG
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc-----------------------cccCCceEEecCcC
Confidence 478999999999999999999999999 99999986432100 00136788999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIE 242 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~ 242 (479)
|++++.++++ ++|+||||||...... ++...+++|+.++.++++++++.+.+ +||++||.++|+.+
T Consensus 74 d~~~~~~~~~--~~d~vi~~ag~~~~~~------~~~~~~~~n~~~~~~~~~~~~~~~~~-~iv~~SS~~~~~~~----- 139 (242)
T 2bka_A 74 KLDDYASAFQ--GHDVGFCCLGTTRGKA------GAEGFVRVDRDYVLKSAELAKAGGCK-HFNLLSSKGADKSS----- 139 (242)
T ss_dssp GGGGGGGGGS--SCSEEEECCCCCHHHH------HHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEECCTTCCTTC-----
T ss_pred CHHHHHHHhc--CCCEEEECCCcccccC------CcccceeeeHHHHHHHHHHHHHCCCC-EEEEEccCcCCCCC-----
Confidence 9999999998 8999999999643211 13457889999999999999998877 99999998887521
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCC-ceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI-RATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl-~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
.+.|+.+|+++|.+++. .++ +++++|||.+|||...+.
T Consensus 140 ---------------------~~~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~---------------- 178 (242)
T 2bka_A 140 ---------------------NFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---------------- 178 (242)
T ss_dssp ---------------------SSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS----------------
T ss_pred ---------------------cchHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCc----------------
Confidence 46899999999998754 478 699999999999964321
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQF 379 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~ 379 (479)
....+........+. .++ ...+++++|+|++++.++.++...+ .+++.
T Consensus 179 --~~~~~~~~~~~~~~~-~~~----~~~~~~~~dva~~~~~~~~~~~~~~---~~~~~ 226 (242)
T 2bka_A 179 --PGEWLVRKFFGSLPD-SWA----SGHSVPVVTVVRAMLNNVVRPRDKQ---MELLE 226 (242)
T ss_dssp --HHHHHHHHHHCSCCT-TGG----GGTEEEHHHHHHHHHHHHTSCCCSS---EEEEE
T ss_pred --HHHHHHHHhhcccCc-ccc----CCcccCHHHHHHHHHHHHhCccccC---eeEee
Confidence 112223333222221 111 2358999999999999999876543 56654
No 93
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.94 E-value=6.9e-27 Score=227.22 Aligned_cols=238 Identities=18% Similarity=0.231 Sum_probs=174.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|||||||||||++++++|+++|++|++++|....... ++....+..+...+++++.+|++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--------------~~~~~~~~~l~~~~v~~v~~D~~d~~ 69 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSN--------------SEKAQLLESFKASGANIVHGSIDDHA 69 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTT--------------HHHHHHHHHHHTTTCEEECCCTTCHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccC--------------HHHHHHHHHHHhCCCEEEEeccCCHH
Confidence 5789999999999999999999999999999886431100 01111111222357899999999999
Q ss_pred HHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCCCCcCC
Q 011706 166 FLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEEG 244 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e~ 244 (479)
++.++++ ++|+|||+|+.. ++.++.+++++|++.| ++ +||+ |+ ||... .|.
T Consensus 70 ~l~~~~~--~~d~vi~~a~~~------------------~~~~~~~l~~aa~~~g~v~-~~v~-S~---~g~~~---~~~ 121 (308)
T 1qyc_A 70 SLVEAVK--NVDVVISTVGSL------------------QIESQVNIIKAIKEVGTVK-RFFP-SE---FGNDV---DNV 121 (308)
T ss_dssp HHHHHHH--TCSEEEECCCGG------------------GSGGGHHHHHHHHHHCCCS-EEEC-SC---CSSCT---TSC
T ss_pred HHHHHHc--CCCEEEECCcch------------------hhhhHHHHHHHHHhcCCCc-eEee-cc---cccCc---ccc
Confidence 9999999 899999999842 2456789999999998 77 8984 43 44321 111
Q ss_pred ceeecCCCCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccc
Q 011706 245 YITINHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~ 323 (479)
.+..| ...| .+|..+|.+++ +.+++++++||+.++|+....
T Consensus 122 --------------~~~~p~~~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~------------------- 163 (308)
T 1qyc_A 122 --------------HAVEPAKSVF-EVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRS------------------- 163 (308)
T ss_dssp --------------CCCTTHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTT-------------------
T ss_pred --------------ccCCcchhHH-HHHHHHHHHHH----hcCCCeEEEEeceeccccccc-------------------
Confidence 12223 3568 99999998775 358999999999998753210
Q ss_pred hHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC--CCcCHHHHHHHHHHHhhhcCC
Q 011706 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT--EQFSVNQLAALVTKAGEKLGL 401 (479)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~--~~~s~~el~~~i~~~~~~~g~ 401 (479)
+. ........++.+.++++++..++|+|++|++++++.++.++...++ +|++.+ +.+|+.|+++.+.+. +|.
T Consensus 164 ~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~--~~~~~g~~~~~s~~e~~~~~~~~---~g~ 237 (308)
T 1qyc_A 164 LA-QAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNK--TLYLRLPANTLSLNELVALWEKK---IDK 237 (308)
T ss_dssp TT-CTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTE--EEECCCGGGEEEHHHHHHHHHHH---TTS
T ss_pred cc-cccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCe--EEEEeCCCCccCHHHHHHHHHHH---hCC
Confidence 00 0000112445677888888899999999999999999987654444 888865 469999999999998 898
Q ss_pred cceeeecC
Q 011706 402 DVKTISVP 409 (479)
Q Consensus 402 ~~~~~~~~ 409 (479)
++++...+
T Consensus 238 ~~~~~~~~ 245 (308)
T 1qyc_A 238 TLEKAYVP 245 (308)
T ss_dssp CCEEEEEC
T ss_pred CCceEeCC
Confidence 87776655
No 94
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.94 E-value=2.2e-25 Score=211.30 Aligned_cols=232 Identities=16% Similarity=0.145 Sum_probs=168.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~D~~ 72 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMA----------------TKAVEDLRM-EGHDVSSVVMDVT 72 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCceEEEEecCC
Confidence 35689999999999999999999999999999999864321 111111111 1357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccC-c-ccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRS-A-PYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~-~-~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
|+++++++++.. ++|+||||||... . .....+.+++...+++|+.|+.++++++.. .+.+ +||++||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~~sS~ 151 (260)
T 3awd_A 73 NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG-VIVAIGSM 151 (260)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC-EEEEEecc
Confidence 999998888643 6999999999754 2 122234456678899999999999998864 3555 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+... +..+...|+.+|++.|.+++.++.+ +|++++++|||.|+++......
T Consensus 152 ~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~-- 207 (260)
T 3awd_A 152 SGLIVN----------------------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM-- 207 (260)
T ss_dssp GGTSCC----------------------SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHH--
T ss_pred hhcccC----------------------CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhccc--
Confidence 544211 2223488999999999999999988 6899999999999998643100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
....+...+..+.+ ...+++++|+|++++.++..+.. .|+ +|++.++.
T Consensus 208 ---------------~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg~ 257 (260)
T 3awd_A 208 ---------------EKPELYDAWIAGTP---------MGRVGQPDEVASVVQFLASDAASLMTGA--IVNVDAGF 257 (260)
T ss_dssp ---------------TCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTT
T ss_pred ---------------CChHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhCchhccCCCc--EEEECCce
Confidence 00122333333322 23578999999999999975433 455 99998864
No 95
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.94 E-value=1.1e-25 Score=211.59 Aligned_cols=226 Identities=15% Similarity=0.142 Sum_probs=169.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|++|||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++|.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~Dv~d~ 66 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK---------------AEAVVEEIKA-KGVDSFAIQANVADA 66 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTSCEEEEECCTTCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHH---------------HHHHHHHHHh-cCCcEEEEEccCCCH
Confidence 578999999999999999999999999999988754321 1111112211 245788999999999
Q ss_pred HHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccccc
Q 011706 165 EFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGEY 234 (479)
Q Consensus 165 ~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v~ 234 (479)
++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++ ++.+.+ +||++||...+
T Consensus 67 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~ 145 (246)
T 3osu_A 67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSG-AIINLSSVVGA 145 (246)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEEcchhhc
Confidence 9998888754 7999999999865432 23355677889999999999999998 455655 99999996544
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++....
T Consensus 146 ~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~------- 194 (246)
T 3osu_A 146 V------------------------GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA------- 194 (246)
T ss_dssp H------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-------
T ss_pred C------------------------CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-------
Confidence 2 12336899999999999999999864 8999999999999886432
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCC--CCceEEEeCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQP--GEFRVFNQFTE 381 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~--g~~~~~ni~~~ 381 (479)
....+...+..+.+ ...+.+.+|+|++++.++..+... |+ +|++.++
T Consensus 195 ------------~~~~~~~~~~~~~p---------~~r~~~~~dva~~v~~l~s~~~~~itG~--~i~vdgG 243 (246)
T 3osu_A 195 ------------LSDELKEQMLTQIP---------LARFGQDTDIANTVAFLASDKAKYITGQ--TIHVNGG 243 (246)
T ss_dssp ------------SCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred ------------cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCCCC--EEEeCCC
Confidence 11233344433332 345788999999999998765443 55 9999875
No 96
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.94 E-value=4.3e-27 Score=222.12 Aligned_cols=237 Identities=13% Similarity=0.043 Sum_probs=160.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+||||++++++|+++|++|++++|..... . . .+.+|++|.+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------------~----~---~~~~D~~~~~ 50 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----------------------E----A---DLSTPGGRET 50 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------------------E----C---CTTSHHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc-----------------------c----c---cccCCcccHH
Confidence 46899999999999999999999999999999854310 0 0 1578999999
Q ss_pred HHHHHhhhc--CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeeccccccCCCC
Q 011706 166 FLSESFKSF--EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 166 ~~~~~~~~~--~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~v~g~~~~ 239 (479)
+++++++.. ++|+||||||.... ..++...+++|+.|+.++++++.+. +.+ +||++||..+|+....
T Consensus 51 ~~~~~~~~~~~~~d~vi~~Ag~~~~------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~~~~ 123 (255)
T 2dkn_A 51 AVAAVLDRCGGVLDGLVCCAGVGVT------AANSGLVVAVNYFGVSALLDGLAEALSRGQQP-AAVIVGSIAATQPGAA 123 (255)
T ss_dssp HHHHHHHHHTTCCSEEEECCCCCTT------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSC-EEEEECCGGGGSTTGG
T ss_pred HHHHHHHHcCCCccEEEECCCCCCc------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCc-eEEEEecccccccccc
Confidence 999988754 79999999997542 1224668899999999999988764 445 9999999888865421
Q ss_pred --CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhhhcc
Q 011706 240 --DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEELCNR 314 (479)
Q Consensus 240 --~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~ 314 (479)
+..|.....++.........+..+.+.|+.+|++.|.+++.++++ .|++++++|||.|+|+...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~----------- 192 (255)
T 2dkn_A 124 ELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ----------- 192 (255)
T ss_dssp GCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH-----------
T ss_pred ccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh-----------
Confidence 110100000000000000000124678999999999999998877 5899999999999998421
Q ss_pred cCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--CCCCceEEEeCCC-CcCHH
Q 011706 315 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--QPGEFRVFNQFTE-QFSVN 386 (479)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~ni~~~-~~s~~ 386 (479)
.++.....+.....+. + ...++++++|+|++++.++..+. ..|+ +||++++ .++++
T Consensus 193 ------------~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg~~~~~~ 251 (255)
T 2dkn_A 193 ------------ASKADPRYGESTRRFV-A-PLGRGSEPREVAEAIAFLLGPQASFIHGS--VLFVDGGMDALMR 251 (255)
T ss_dssp ------------HHHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTHHHHHC
T ss_pred ------------hcccchhhHHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCCCcccceee--EEEecCCeEeeee
Confidence 1100000000000000 1 34579999999999999998753 3455 9999985 34443
No 97
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.94 E-value=2.2e-25 Score=213.66 Aligned_cols=238 Identities=11% Similarity=0.037 Sum_probs=168.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... ..+..+.+....+.++.++.+|++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDE---------------IRTVTDEVAGLSSGTVLHHPADMT 86 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHH---------------HHHHHHHHHTTCSSCEEEECCCTT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHH---------------HHHHHHHHhhccCCcEEEEeCCCC
Confidence 46789999999999999999999999999999998743211 111222232333467899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++ ++.+.+ +||++||..
T Consensus 87 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~ 165 (281)
T 3v2h_A 87 KPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG-RIINIASAH 165 (281)
T ss_dssp CHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECCcc
Confidence 999998888754 7999999999865433 23356678889999999999999987 444555 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.++ |+++++++||.|.++......
T Consensus 166 ~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--- 218 (281)
T 3v2h_A 166 GLV------------------------ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI--- 218 (281)
T ss_dssp GTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------
T ss_pred ccc------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhc---
Confidence 442 22336899999999999999999885 899999999999988543210
Q ss_pred hhhcccCCCCcccchHHHHHH--HHhcCCC-eEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCV--QAAVGHP-LTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..... ....... ...+.++.....+++++|+|++++.++..... .|+ ++++.++
T Consensus 219 ----------------~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~--~i~vdGG 277 (281)
T 3v2h_A 219 ----------------PDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGT--HVSMDGG 277 (281)
T ss_dssp -------------------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSC--EEEESTT
T ss_pred ----------------chhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCc--EEEECCC
Confidence 00000 0000000 11223345567899999999999999976543 455 9999875
No 98
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.94 E-value=4.3e-26 Score=218.82 Aligned_cols=248 Identities=17% Similarity=0.193 Sum_probs=181.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccC--CCceeEEEcc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLT--GKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D 160 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.... ..++.++.+|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~D 71 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKL----------------AGAVQELEALGANGGAIRYEPTD 71 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHTTCCSSCEEEEEECC
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHhCCCCceEEEEeCC
Confidence 46789999999999999999999999999999999865421 11222222221 1278899999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEee
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLG 229 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~S 229 (479)
++|+++++++++.. ++|+||||||.... +....+.+++.+++++|+.|+.++++++... +.+ +||++|
T Consensus 72 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~iv~is 150 (281)
T 3svt_A 72 ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGG-SFVGIS 150 (281)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEe
Confidence 99999998888754 79999999997332 2233455677889999999999999987543 334 999999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchh
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
|...+. +..+...|+.||++.+.+++.++.++ |+++++++||.|+++......
T Consensus 151 S~~~~~------------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 206 (281)
T 3svt_A 151 SIAASN------------------------THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT 206 (281)
T ss_dssp CHHHHS------------------------CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred CHHHcC------------------------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc
Confidence 976553 22346899999999999999999886 599999999999887532100
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC-Cc
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE-QF 383 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~-~~ 383 (479)
....+...+.... ....+.+++|+|++++.++..... .|+ +|++.++ ..
T Consensus 207 -----------------~~~~~~~~~~~~~---------p~~r~~~~~dva~~~~~l~s~~~~~itG~--~~~vdgG~~~ 258 (281)
T 3svt_A 207 -----------------ESAELSSDYAMCT---------PLPRQGEVEDVANMAMFLLSDAASFVTGQ--VINVDGGQML 258 (281)
T ss_dssp -----------------TCHHHHHHHHHHC---------SSSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTGGG
T ss_pred -----------------cCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccCCCCCC--EEEeCCChhc
Confidence 0011222222222 234567899999999999976544 355 9999875 44
Q ss_pred C-HHHHHHHHHHHhhhcCCc
Q 011706 384 S-VNQLAALVTKAGEKLGLD 402 (479)
Q Consensus 384 s-~~el~~~i~~~~~~~g~~ 402 (479)
+ ..++.+.+.+. +|.+
T Consensus 259 ~~~~~~~~~~~~~---~~~~ 275 (281)
T 3svt_A 259 RRGPDFSAMLEPV---FGRD 275 (281)
T ss_dssp SCCCCCHHHHHHH---HCTT
T ss_pred ccCCcchhccccc---cCCc
Confidence 4 67888888887 5554
No 99
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.94 E-value=5e-25 Score=209.61 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=167.5
Q ss_pred CCCCcEEEEEcCCc-hhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDG-YCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG-~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+++|+||||||+| +||.+++++|+++|++|++++|..... .+..+.+......++.++.+|+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dl 82 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRL----------------GETRDQLADLGLGRVEAVVCDV 82 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHTTCSSCEEEEECCT
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHH----------------HHHHHHHHhcCCCceEEEEeCC
Confidence 46799999999997 699999999999999999999865421 1222233333346899999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc-----CCcceEEEeec
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF-----RQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-----g~~~~~V~~SS 230 (479)
+|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... +.+ +||++||
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~iv~~sS 161 (266)
T 3o38_A 83 TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGG-VIVNNAS 161 (266)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCE-EEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCe-EEEEeCC
Confidence 9999998888754 7999999999765433 23356677889999999999999988654 334 8999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+. +..+...|+.+|++.+.+++.++.+ .|+++++++||.|..+.....
T Consensus 162 ~~~~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-- 215 (266)
T 3o38_A 162 VLGWR------------------------AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT-- 215 (266)
T ss_dssp GGGTC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------
T ss_pred HHHcC------------------------CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc--
Confidence 65442 2234789999999999999999988 589999999999987743210
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
........+........+.+++|+|++++.++......-.++++++.++
T Consensus 216 -------------------------~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG 264 (266)
T 3o38_A 216 -------------------------SSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ 264 (266)
T ss_dssp ------------------------------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred -------------------------CcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence 0001111112223445778999999999999976443222349999875
No 100
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.94 E-value=2.5e-25 Score=211.33 Aligned_cols=240 Identities=15% Similarity=0.117 Sum_probs=168.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~D~~ 67 (263)
T 3ai3_A 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRL----------------HEAARSLKEKFGVRVLEVAVDVA 67 (263)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHHCCCEEEEECCTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH----------------HHHHHHHHHhcCCceEEEEcCCC
Confidence 35689999999999999999999999999999999864311 11111111111357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||..
T Consensus 68 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~ 146 (263)
T 3ai3_A 68 TPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGG-AIIHNASIC 146 (263)
T ss_dssp SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECchh
Confidence 999998888743 7999999999764322 223555678899999999999998874 34555 999999977
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+.. ..+...|+.||++.+.+++.++.+ +|+++++++||.|++|..... ..
T Consensus 147 ~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~ 200 (263)
T 3ai3_A 147 AVQP------------------------LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT--AK 200 (263)
T ss_dssp GTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH--HH
T ss_pred hcCC------------------------CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhh--hH
Confidence 6642 133678999999999999999988 589999999999999842110 00
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.+.... +. ....+...+.... .....+.+++|+|++++.++..+.. .|+ +|++.++
T Consensus 201 ~~~~~~---~~---~~~~~~~~~~~~~--------~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~--~~~vdgG 258 (263)
T 3ai3_A 201 ELTKDN---GG---DWKGYLQSVADEH--------APIKRFASPEELANFFVFLCSERATYSVGS--AYFVDGG 258 (263)
T ss_dssp HHTTTT---TC---CHHHHHHHHHHHH--------CTTCSCBCHHHHHHHHHHHTSTTCTTCCSC--EEEESTT
T ss_pred hhhccc---CC---cHHHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHcCccccCCCCc--EEEECCC
Confidence 000000 00 0011112221110 1224689999999999999876543 354 9999885
No 101
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.94 E-value=4.8e-25 Score=208.66 Aligned_cols=224 Identities=14% Similarity=0.077 Sum_probs=162.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|....... ..+ ..+.++.++.+|++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------------~~~----~~~~~~~~~~~Dv~ 63 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE----------------PAA----ELGAAVRFRNADVT 63 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------CEEEECCTT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH----------------HHH----HhCCceEEEEccCC
Confidence 3578999999999999999999999999999999986542111 011 11347889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccc-----cccccccchhhhhhHHHHHHHHHHHHHc----------CCc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYS-----MIDRSRAVFTQHNNVIGTLNVLFAMKEF----------RQE 222 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-----~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----------g~~ 222 (479)
|.++++++++.. ++|+||||||....... ..+.+++.+++++|+.|+.++++++... +.+
T Consensus 64 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g 143 (257)
T 3tpc_A 64 NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERG 143 (257)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCe
Confidence 999998888754 79999999997643221 2345667889999999999999998763 333
Q ss_pred ceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeec
Q 011706 223 CHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYG 299 (479)
Q Consensus 223 ~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~G 299 (479)
+||++||...+. +..+...|+.||++.+.+++.++.+ +|+++++++||.|.+
T Consensus 144 -~iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t 198 (257)
T 3tpc_A 144 -VIVNTASIAAFD------------------------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDT 198 (257)
T ss_dssp -EEEEECCTHHHH------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSC
T ss_pred -EEEEEechhhcc------------------------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCC
Confidence 899999966542 2234689999999999999999988 589999999999998
Q ss_pred CCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCce-eccccHHHHHHHHHHHHhCCCCCCCceEEEe
Q 011706 300 VRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQT-RGYLDIRDTVQCVELAIANPAQPGEFRVFNQ 378 (479)
Q Consensus 300 p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni 378 (479)
+.... .......... ..... ..+.+++|+|++++.++......|+ ++++
T Consensus 199 ~~~~~-------------------~~~~~~~~~~---------~~~p~~~r~~~~~dva~~v~~l~s~~~itG~--~i~v 248 (257)
T 3tpc_A 199 PMMAG-------------------MPQDVQDALA---------ASVPFPPRLGRAEEYAALVKHICENTMLNGE--VIRL 248 (257)
T ss_dssp C------------------------------------------CCSSSSCSCBCHHHHHHHHHHHHHCTTCCSC--EEEE
T ss_pred hhhcc-------------------CCHHHHHHHH---------hcCCCCCCCCCHHHHHHHHHHHcccCCcCCc--EEEE
Confidence 75321 0011111111 11222 4678999999999999987555666 9999
Q ss_pred CCC
Q 011706 379 FTE 381 (479)
Q Consensus 379 ~~~ 381 (479)
.++
T Consensus 249 dGG 251 (257)
T 3tpc_A 249 DGA 251 (257)
T ss_dssp STT
T ss_pred CCC
Confidence 875
No 102
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.94 E-value=7.7e-25 Score=206.25 Aligned_cols=228 Identities=14% Similarity=0.067 Sum_probs=166.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++|++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~D~~~~~ 65 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETL----------------EETARTHWHAYADKVLRVRADVADEG 65 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHSTTTGGGEEEEECCTTCHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 68999999999999999999999999999999864321 11111110111346889999999999
Q ss_pred HHHHHhhhc-----CCCEEEEcccccCccc----ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 166 FLSESFKSF-----EPDAVVHFGEQRSAPY----SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 166 ~~~~~~~~~-----~~D~Vih~A~~~~~~~----~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
+++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++. +.+.+ +||++||..
T Consensus 66 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~isS~~ 144 (250)
T 2cfc_A 66 DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG-VIVNIASVA 144 (250)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-EEEEECChh
Confidence 998888643 7999999999754322 223455678889999999988877664 34555 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+.. ..+...|+.+|++.+.+++.++.++ |++++++|||.|+++......
T Consensus 145 ~~~~------------------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--- 197 (250)
T 2cfc_A 145 SLVA------------------------FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL--- 197 (250)
T ss_dssp GTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH---
T ss_pred hccC------------------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc---
Confidence 5532 2336899999999999999999886 899999999999998643100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
. ...+...+..+.+ ...+.+++|+|++++.++..+.. .|+ ++++.++.
T Consensus 198 ------------~--~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gG~ 247 (250)
T 2cfc_A 198 ------------D--QPELRDQVLARIP---------QKEIGTAAQVADAVMFLAGEDATYVNGA--ALVMDGAY 247 (250)
T ss_dssp ------------T--SHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSTTCTTCCSC--EEEESTTG
T ss_pred ------------C--CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhhcccCC--EEEECCce
Confidence 0 0122233333222 23578999999999999986544 355 99998753
No 103
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.94 E-value=6.3e-25 Score=209.50 Aligned_cols=227 Identities=15% Similarity=0.055 Sum_probs=170.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+ +.++.++.+|++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDL----------------AGAAASV----GRGAVHHVVDLT 67 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCH----------------HHHHHHH----CTTCEEEECCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHH----------------HHHHHHh----CCCeEEEECCCC
Confidence 46789999999999999999999999999999999864321 1111111 457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc---ccccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeec
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA---PYSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~---~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS 230 (479)
|.++++++++.. ++|+||||||.... .....+.+++..++++|+.|+.++++++ ++.+.+ +||++||
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS 146 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGG-AIVNISS 146 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEECC
Confidence 999998888754 79999999997632 1223456677889999999999999998 555655 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+. +..+...|+.||++.+.+++.++.+ +|+++++++||.|++|......
T Consensus 147 ~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~- 201 (271)
T 3tzq_B 147 ATAHA------------------------AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL- 201 (271)
T ss_dssp GGGTS------------------------BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----
T ss_pred HHHcC------------------------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-
Confidence 76552 2234689999999999999999998 5899999999999998643110
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
...+...+.... ....+.+++|+|++++.++......-.++++++.++
T Consensus 202 -----------------~~~~~~~~~~~~---------~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 202 -----------------PQPIVDIFATHH---------LAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp -----------------CHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -----------------CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 112222222222 223567899999999999976544222239999886
No 104
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.93 E-value=2e-25 Score=212.30 Aligned_cols=229 Identities=14% Similarity=0.086 Sum_probs=153.4
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|+||||||+|+||++++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|+
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~ 72 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL----------------NECLSKWQK-KGFQVTGSVCDA 72 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCeeEEEECCC
Confidence 346789999999999999999999999999999998864321 111112211 134688999999
Q ss_pred CChHHHHHHhhh------cCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKS------FEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~------~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS 230 (479)
+|.++++++++. .++|+||||||...... ...+.+++...+++|+.|+.++++++ ++.+.+ +||++||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~-~iv~isS 151 (266)
T 1xq1_A 73 SLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG-NIIFMSS 151 (266)
T ss_dssp TSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-EEEEEC-
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence 999998888753 37999999999754322 22345567788999999999999988 455666 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+.. ..+...|+.+|++.+.+++.++.++ |++++++|||.++++.....
T Consensus 152 ~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-- 205 (266)
T 1xq1_A 152 IAGVVS------------------------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV-- 205 (266)
T ss_dssp ---------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------
T ss_pred chhccC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh--
Confidence 765531 1236789999999999999999885 89999999999999864210
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+...+... .....+++++|+|++++.++..+.. .|+ ++++.++
T Consensus 206 ----------------~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gG 254 (266)
T 1xq1_A 206 ----------------YDDEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPAASYITGQ--TICVDGG 254 (266)
T ss_dssp -------------------------------------------CCGGGGHHHHHHHTSGGGTTCCSC--EEECCCC
T ss_pred ----------------cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccCccCc--EEEEcCC
Confidence 000111111111 1123578999999999999875432 355 9999875
No 105
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.93 E-value=2.9e-25 Score=208.37 Aligned_cols=225 Identities=15% Similarity=0.086 Sum_probs=165.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+. . .++.++.+|++
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~---~--~~~~~~~~D~~ 62 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----------------DSLVRE---C--PGIEPVCVDLG 62 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHH---S--TTCEEEECCTT
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHH---c--CCCCEEEEeCC
Confidence 35689999999999999999999999999999998854311 011111 1 24677899999
Q ss_pred ChHHHHHHhhhc-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----C-CcceEEEeecccccc
Q 011706 163 DFEFLSESFKSF-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R-QECHLVKLGTMGEYG 235 (479)
Q Consensus 163 d~~~~~~~~~~~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g-~~~~~V~~SS~~v~g 235 (479)
|+++++++++.. ++|+||||||...... ...+.+++...+++|+.++.++++++... + .+ +||++||...+.
T Consensus 63 ~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~-~iv~~sS~~~~~ 141 (244)
T 3d3w_A 63 DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG-AIVNVSSQCSQR 141 (244)
T ss_dssp CHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE-EEEEECCGGGTS
T ss_pred CHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc-EEEEeCchhhcc
Confidence 999999999754 5899999999765332 22244567788999999999999888653 4 44 999999976553
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+..+...|+.||++.|.+++.++.+ .|++++++|||.|+++......
T Consensus 142 ------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~------ 191 (244)
T 3d3w_A 142 ------------------------AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW------ 191 (244)
T ss_dssp ------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHS------
T ss_pred ------------------------CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhc------
Confidence 2234689999999999999999887 4899999999999998532100
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--CCCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--QPGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~ni~~~ 381 (479)
. . ..+...+..+. ....+++++|+|++++.++.... ..|+ +|++.++
T Consensus 192 ---~-----~---~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gG 240 (244)
T 3d3w_A 192 ---S-----D---PHKAKTMLNRI---------PLGKFAEVEHVVNAILFLLSDRSGMTTGS--TLPVEGG 240 (244)
T ss_dssp ---C-----S---TTHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---c-----C---hHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCccccCCCCC--EEEECCC
Confidence 0 0 01112222221 23478999999999999997643 2455 9999875
No 106
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.93 E-value=1.7e-25 Score=211.65 Aligned_cols=229 Identities=11% Similarity=0.041 Sum_probs=170.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dv~ 71 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGA----------------EAVAAAIRQ-AGGKAIGLECNVT 71 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEECCCC
Confidence 46789999999999999999999999999999999865321 111112211 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
|.++++++++.. ++|+||||||.........+++++..++++|+.|+.++++++. +.+.+ +||++||...
T Consensus 72 d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~ 150 (256)
T 3gaf_A 72 DEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG-AILNISSMAG 150 (256)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEcCHHH
Confidence 999988887754 7999999999865433344666788899999999999999874 34445 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 151 ~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------ 200 (256)
T 3gaf_A 151 EN------------------------TNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT------ 200 (256)
T ss_dssp TC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH------
T ss_pred cC------------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh------
Confidence 42 22346899999999999999999885 8999999999998763110
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
. ........+... .....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 201 ~------------~~~~~~~~~~~~---------~p~~r~~~~~dva~~~~~L~s~~~~~itG~--~i~vdgG~ 251 (256)
T 3gaf_A 201 V------------LTPEIERAMLKH---------TPLGRLGEAQDIANAALFLCSPAAAWISGQ--VLTVSGGG 251 (256)
T ss_dssp H------------CCHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred c------------cCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCcccCccCC--EEEECCCc
Confidence 0 001222222222 2234678999999999999975443 455 99998853
No 107
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.93 E-value=3e-25 Score=213.83 Aligned_cols=232 Identities=15% Similarity=0.120 Sum_probs=171.2
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|+||||||+|+||.+++++|+++|++|++++|..... .+.........+.++.++.+|+
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~Dv 106 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD----------------ANETKQYVEKEGVKCVLLPGDL 106 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH----------------HHHHHHHHHTTTCCEEEEESCT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH----------------HHHHHHHHHhcCCcEEEEECCC
Confidence 356899999999999999999999999999999999864321 1111111122346789999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCcc--cccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecccc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAP--YSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGE 233 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v 233 (479)
+|+++++++++.. ++|+||||||..... ....+.+++.+++++|+.|+.++++++...- ...+||++||...
T Consensus 107 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 186 (291)
T 3ijr_A 107 SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA 186 (291)
T ss_dssp TSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh
Confidence 9999988887754 799999999976432 2233566788899999999999999997642 1238999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+.. ......|+.||++.+.+++.++.++ |+++++++||.|+++.....
T Consensus 187 ~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----- 237 (291)
T 3ijr_A 187 YEG------------------------NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS----- 237 (291)
T ss_dssp HHC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH-----
T ss_pred cCC------------------------CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc-----
Confidence 532 2236889999999999999999886 89999999999998742100
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
.-....... ........+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 238 -------------~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~--~i~vdGG~ 287 (291)
T 3ijr_A 238 -------------FDEKKVSQF---------GSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQ--MIHVNGGV 287 (291)
T ss_dssp -------------SCHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSC--EEEESSSC
T ss_pred -------------CCHHHHHHH---------HccCCCCCCcCHHHHHHHHHHHhCCccCCCcCC--EEEECCCc
Confidence 001111111 1223345678999999999999976543 455 99998753
No 108
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.93 E-value=4.7e-25 Score=209.27 Aligned_cols=229 Identities=14% Similarity=0.040 Sum_probs=171.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|.... +.+..+.+......++.++.+|++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~l~~~~~~~~~~~~~Dv~ 70 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTAD----------------IDACVADLDQLGSGKVIGVQTDVS 70 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH----------------HHHHHHHHHTTSSSCEEEEECCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----------------HHHHHHHHHhhCCCcEEEEEcCCC
Confidence 4678999999999999999999999999999999986542 112222333332357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++... +.+ +||++||..
T Consensus 71 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~ 149 (262)
T 3pk0_A 71 DRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSG-RVVLTSSIT 149 (262)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSC-EEEEECCSB
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEechh
Confidence 999998887654 7999999999765432 33366678889999999999999988654 555 999999964
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.... +..+...|+.||++.+.+++.++.+ +|+++++++||.|+++....
T Consensus 150 ~~~~-----------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----- 201 (262)
T 3pk0_A 150 GPIT-----------------------GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE----- 201 (262)
T ss_dssp TTTB-----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-----
T ss_pred hccC-----------------------CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-----
Confidence 3200 1233689999999999999999998 58999999999998874211
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+........+ ...+.+++|+|++++.++..... .|+ ++++.++
T Consensus 202 --------------~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~~~~~itG~--~i~vdGG 250 (262)
T 3pk0_A 202 --------------NGEEYIASMARSIP---------AGALGTPEDIGHLAAFLATKEAGYITGQ--AIAVDGG 250 (262)
T ss_dssp --------------TCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------------cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCcCC--EEEECCC
Confidence 01223333333322 23468899999999999976543 455 9999875
No 109
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.93 E-value=4.4e-25 Score=212.64 Aligned_cols=229 Identities=15% Similarity=0.067 Sum_probs=170.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+......++.++.+|++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dv~ 101 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL----------------SSVTAELGELGAGNVIGVRLDVS 101 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG----------------HHHHHHHTTSSSSCEEEEECCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHhhCCCcEEEEEEeCC
Confidence 46789999999999999999999999999999999865421 12222333222257899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++ ++.+.+ +||++||..
T Consensus 102 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iV~isS~~ 180 (293)
T 3rih_A 102 DPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRG-RVILTSSIT 180 (293)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSC-EEEEECCSB
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEEeChh
Confidence 999988887654 7999999999865432 23366678889999999999999988 355555 999999964
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+.. +..+...|+.||++.+.+++.++.++ |+++++++||.|+++....
T Consensus 181 ~~~~-----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~----- 232 (293)
T 3rih_A 181 GPVT-----------------------GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD----- 232 (293)
T ss_dssp TTTB-----------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-----
T ss_pred hccC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-----
Confidence 3200 11236899999999999999999884 8999999999999874210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+...+....+ ...+...+|++++++.++..... .|+ ++++.++
T Consensus 233 --------------~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~fL~s~~a~~itG~--~i~vdGG 281 (293)
T 3rih_A 233 --------------MGEEYISGMARSIP---------MGMLGSPVDIGHLAAFLATDEAGYITGQ--AIVVDGG 281 (293)
T ss_dssp --------------TCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------------ccHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCccccCCCCC--EEEECCC
Confidence 11223333333322 23456899999999999975443 455 9999875
No 110
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.93 E-value=4.5e-26 Score=221.00 Aligned_cols=245 Identities=13% Similarity=0.083 Sum_probs=175.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dl~ 86 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL----------------KATAEQISSQTGNKVHAIQCDVR 86 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHHSSCEEEEECCTT
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHhcCCceEEEEeCCC
Confidence 46789999999999999999999999999999999864321 11111221111357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc-----CCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF-----RQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-----g~~~~~V~~SS~ 231 (479)
|.++++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++... +.+ +||++||.
T Consensus 87 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~-~iv~isS~ 165 (302)
T 1w6u_A 87 DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGA-AFLSITTI 165 (302)
T ss_dssp CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEEECCT
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC-EEEEEccc
Confidence 999998888754 6899999999754322 22345567788999999999998888542 334 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+.. ..+...|+.||++.|.+++.++.+ +|++++++|||.|+++......
T Consensus 166 ~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~-- 219 (302)
T 1w6u_A 166 YAETG------------------------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL-- 219 (302)
T ss_dssp HHHHC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C--
T ss_pred ccccC------------------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhc--
Confidence 65531 234678999999999999999988 6899999999999987421100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC-CcCH
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE-QFSV 385 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~-~~s~ 385 (479)
. ... .....+..+.+ ...+.+++|+|++++.++..... .|+ +|++.++ .+++
T Consensus 220 -------~-----~~~--~~~~~~~~~~p---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg~~~~~ 274 (302)
T 1w6u_A 220 -------D-----PTG--TFEKEMIGRIP---------CGRLGTVEELANLAAFLCSDYASWINGA--VIKFDGGEEVLI 274 (302)
T ss_dssp -------C-----TTS--HHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTTHHHHH
T ss_pred -------c-----cch--hhHHHHHhcCC---------cCCCCCHHHHHHHHHHHcCCcccccCCC--EEEECCCeeecc
Confidence 0 000 11122222222 23578999999999999875433 455 9999985 5777
Q ss_pred HHHHHHHHHH
Q 011706 386 NQLAALVTKA 395 (479)
Q Consensus 386 ~el~~~i~~~ 395 (479)
.|+++.+.+.
T Consensus 275 ~~~~~~~~~~ 284 (302)
T 1w6u_A 275 SGEFNDLRKV 284 (302)
T ss_dssp HSTTGGGGGC
T ss_pred CCccccchhh
Confidence 8887777665
No 111
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.93 E-value=5.4e-25 Score=211.00 Aligned_cols=250 Identities=14% Similarity=0.082 Sum_probs=172.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|........... ......+.+..+.+. ..+.++.++.+|++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYA---PASPEDLDETARLVE-DQGRKALTRVLDVR 87 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSC---CCCHHHHHHHHHHHH-TTTCCEEEEECCTT
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecccccccccccc---ccCHHHHHHHHHHHH-hcCCeEEEEEcCCC
Confidence 46789999999999999999999999999999999843211000000 000011111122222 22467889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+.+.+||++||..
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 167 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA 167 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence 999998888753 7999999999865433 2335667888999999999999998843 33223899999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.+ +|+++++++||.|+++...+..
T Consensus 168 ~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--- 220 (280)
T 3pgx_A 168 GLK------------------------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEA--- 220 (280)
T ss_dssp GTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHH---
T ss_pred hcc------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhh---
Confidence 542 2234689999999999999999988 5899999999999998754311
Q ss_pred hhhcccCCCCcccchHHHHHHHH-hcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQA-AVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
....+... .....+... ..... .+++++|+|++++.++..... .|+ ++++.++.
T Consensus 221 ---------------~~~~~~~~~~~~~~~~~~-~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~--~i~vdGG~ 277 (280)
T 3pgx_A 221 ---------------MMEIFARHPSFVHSFPPM-PVQPN-GFMTADEVADVVAWLAGDGSGTLTGT--QIPVDKGA 277 (280)
T ss_dssp ---------------HHHHHHHCGGGGGGSCCB-TTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSC--EEEESTTG
T ss_pred ---------------hhhhhhcCchhhhhhhhc-ccCCC-CCCCHHHHHHHHHHHhCccccCCCCC--EEEECCCc
Confidence 11111110 000111111 11222 489999999999999976543 355 99998764
No 112
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.93 E-value=2e-25 Score=213.70 Aligned_cols=239 Identities=13% Similarity=0.100 Sum_probs=166.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~ 81 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL----------------RTTLKELRE-AGVEADGRTCDVR 81 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCceEEEECCCC
Confidence 35789999999999999999999999999999999864321 111112211 1356889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc------CCcceEEEeec
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF------RQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~------g~~~~~V~~SS 230 (479)
|+++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++... +.+ +||++||
T Consensus 82 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g-~iv~isS 160 (277)
T 2rhc_B 82 SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG-RIVNIAS 160 (277)
T ss_dssp CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEE-EEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCe-EEEEECc
Confidence 999988887643 6999999999764322 23355567889999999999999987654 444 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+. +..+...|+.+|++.+.+++.++.++ |+++++++||.|+++......
T Consensus 161 ~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~- 215 (277)
T 2rhc_B 161 TGGKQ------------------------GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR- 215 (277)
T ss_dssp GGGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHH-
T ss_pred ccccc------------------------CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhh-
Confidence 65432 12336789999999999999999885 799999999999887321000
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
...... ............... .....+++++|+|++++.++..+.. .|+ ++++.++.
T Consensus 216 -~~~~~~------~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~--~~~vdGG~ 274 (277)
T 2rhc_B 216 -EHYSDI------WEVSTEEAFDRITAR---------VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQ--ALNVCGGL 274 (277)
T ss_dssp -HHHHHH------HTCCHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTC
T ss_pred -hhcccc------cccchHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhcCCCCc--EEEECCCc
Confidence 000000 000000111111111 1234689999999999999976533 454 99998753
No 113
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.93 E-value=2.5e-25 Score=211.00 Aligned_cols=232 Identities=13% Similarity=0.092 Sum_probs=166.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||++++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~ 68 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKEL----------------NDCLTQWRS-KGFKVEASVCDLS 68 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCEEEEEECCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEEcCCC
Confidence 45789999999999999999999999999999999864321 111122211 1357889999999
Q ss_pred ChHHHHHHhhh------cCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecc
Q 011706 163 DFEFLSESFKS------FEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~------~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~ 231 (479)
|+++++++++. .++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 69 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~ 147 (260)
T 2ae2_A 69 SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG-NVVFISSV 147 (260)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcch
Confidence 99998888753 27999999999764322 233556678899999999999999884 44555 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.||++.+.+++.++.++ |+++++++||.+.++....
T Consensus 148 ~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---- 199 (260)
T 2ae2_A 148 SGAL------------------------AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---- 199 (260)
T ss_dssp GGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH----
T ss_pred hhcc------------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh----
Confidence 6542 12336789999999999999999885 8999999999998763110
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
... .......+...... .....+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 200 --~~~--------~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~--~~~vdgG 253 (260)
T 2ae2_A 200 --TIQ--------DPEQKENLNKLIDR---------CALRRMGEPKELAAMVAFLCFPAASYVTGQ--IIYVDGG 253 (260)
T ss_dssp --HTT--------SHHHHHHHHHHHHT---------STTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --hcc--------ChhhHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCccccCCCCC--EEEECCC
Confidence 000 00000111122221 1234688999999999999875433 455 9999875
No 114
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.93 E-value=3.7e-25 Score=211.92 Aligned_cols=249 Identities=14% Similarity=0.105 Sum_probs=163.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhc--ccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK--SLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~Dl 161 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+. ...+.++.++.+|+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~D~ 67 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERL----------------EETRQQILAAGVSEQNVNSVVADV 67 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHTTCCGGGEEEEECCT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHhcccCCCceeEEeccc
Confidence 4689999999999999999999999999999999864321 11111110 11124688999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccc----cccccchhhhhhHHHHHHHHHHHHHc----CCcceEEE
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMI----DRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVK 227 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~ 227 (479)
+|+++++++++.. ++|+||||||...... ... +.+++..++++|+.|+.++++++... + + +||+
T Consensus 68 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g-~iv~ 145 (278)
T 1spx_A 68 TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G-EIVN 145 (278)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C-EEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C-eEEE
Confidence 9999998888743 7999999999754321 112 45567888999999999999988654 5 4 9999
Q ss_pred eecccc-ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCC
Q 011706 228 LGTMGE-YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTD 303 (479)
Q Consensus 228 ~SS~~v-~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~ 303 (479)
+||... +. +..+...|+.||++.+.+++.++.+ +|+++++++||.|+++...
T Consensus 146 isS~~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 201 (278)
T 1spx_A 146 ISSIASGLH------------------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGS 201 (278)
T ss_dssp ECCTTSSSS------------------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--
T ss_pred Eeccccccc------------------------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcccc
Confidence 999754 32 1233678999999999999999887 4899999999999988532
Q ss_pred chhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC---CCCCceEEEeCC
Q 011706 304 ETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA---QPGEFRVFNQFT 380 (479)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~~~~ni~~ 380 (479)
.... ....... +......+....+ ...+.+++|+|++++.++..+. ..|+ +|++.+
T Consensus 202 ~~~~---------~~~~~~~-~~~~~~~~~~~~p---------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~--~~~vdg 260 (278)
T 1spx_A 202 AMGM---------PEETSKK-FYSTMATMKECVP---------AGVMGQPQDIAEVIAFLADRKTSSYIIGH--QLVVDG 260 (278)
T ss_dssp ----------------------HHHHHHHHHHCT---------TSSCBCHHHHHHHHHHHHCHHHHTTCCSC--EEEEST
T ss_pred cccc---------Cchhhhh-hhHHHHHHHhcCC---------CcCCCCHHHHHHHHHHHcCccccCcccCc--EEEECC
Confidence 1100 0000000 0001112211111 2357899999999999987543 3465 999998
Q ss_pred C-CcCHHHHHHHHHHH
Q 011706 381 E-QFSVNQLAALVTKA 395 (479)
Q Consensus 381 ~-~~s~~el~~~i~~~ 395 (479)
+ .+++.|+++.+.+.
T Consensus 261 G~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 261 GSSLIMGLHCQDFAKL 276 (278)
T ss_dssp TGGGC-----------
T ss_pred CcccccCcccccHHHH
Confidence 5 69999999998875
No 115
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.93 E-value=7.1e-25 Score=207.01 Aligned_cols=229 Identities=15% Similarity=0.084 Sum_probs=165.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCce-eEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNI-ELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~Dl 161 (479)
.+++|+||||||+|+||++++++|+++|++|++++|..... .+..+.+ +.++ .++.+|+
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~~D~ 67 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAAL----------------DRAAQEL----GAAVAARIVADV 67 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHH----GGGEEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHh----cccceeEEEEec
Confidence 45789999999999999999999999999999999864311 1111111 2355 8899999
Q ss_pred CChHHHHHHhhh----cCCCEEEEcccccCcccc-cccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 162 CDFEFLSESFKS----FEPDAVVHFGEQRSAPYS-MIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 162 ~d~~~~~~~~~~----~~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
+|.++++++++. .++|+||||||....... ..+.+++...+++|+.|+.++++++. +.+.+ +||++||..
T Consensus 68 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~ 146 (254)
T 2wsb_A 68 TDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAG-AIVNLGSMS 146 (254)
T ss_dssp TCHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CCHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEecch
Confidence 999999888754 279999999997654322 22445667889999999888877663 44555 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+... +..+...|+.+|++.|.+++.++.++ |++++++|||.++++......
T Consensus 147 ~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~--- 201 (254)
T 2wsb_A 147 GTIVN----------------------RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR--- 201 (254)
T ss_dssp GTSCC----------------------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH---
T ss_pred hccCC----------------------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc---
Confidence 55321 22335899999999999999999886 899999999999987421100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
. ...+...+....+ ...+++++|+|++++.++..+.. .|+ ++++.++.
T Consensus 202 ------------~--~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gG~ 251 (254)
T 2wsb_A 202 ------------E--RPELFETWLDMTP---------MGRCGEPSEIAAAALFLASPAASYVTGA--ILAVDGGY 251 (254)
T ss_dssp ------------T--CHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTG
T ss_pred ------------c--ChHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccccccCC--EEEECCCE
Confidence 0 0122223322222 24589999999999999875432 455 99998763
No 116
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.93 E-value=6.4e-25 Score=208.55 Aligned_cols=232 Identities=14% Similarity=0.104 Sum_probs=162.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc------CCCceeEE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL------TGKNIELY 157 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~v 157 (479)
+++|+||||||+|+||.+++++|+++|++|++++|....... ..+.+... ...++.++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 68 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQE----------------TVRLLGGPGSKEGPPRGNHAAF 68 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----------------HHHTC------------CCEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH----------------HHHHHHhcCccccccCcceEEE
Confidence 568899999999999999999999999999999986432111 11111110 01468899
Q ss_pred EcccCChHHHHHHhhhc-----CC-CEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----C-CcceE
Q 011706 158 IGDICDFEFLSESFKSF-----EP-DAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R-QECHL 225 (479)
Q Consensus 158 ~~Dl~d~~~~~~~~~~~-----~~-D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g-~~~~~ 225 (479)
.+|++|.++++++++.. ++ |+||||||...... ...+.+++...+++|+.|+.++++++... + .+ +|
T Consensus 69 ~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g-~i 147 (264)
T 2pd6_A 69 QADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRG-SI 147 (264)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE-EE
T ss_pred EecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCc-eE
Confidence 99999999998888743 35 99999999765322 22345567888999999999999988654 3 34 99
Q ss_pred EEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCC
Q 011706 226 VKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT 302 (479)
Q Consensus 226 V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~ 302 (479)
|++||...+. +..+...|+.+|++.+.+++.++.+ .|++++++|||.++++..
T Consensus 148 v~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 203 (264)
T 2pd6_A 148 INISSIVGKV------------------------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT 203 (264)
T ss_dssp EEECCTHHHH------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred EEECChhhcc------------------------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence 9999964332 1123689999999999999999888 689999999999999864
Q ss_pred CchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--CCCCceEEEeCC
Q 011706 303 DETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--QPGEFRVFNQFT 380 (479)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~ni~~ 380 (479)
.. ....+...+..+ .....+.+++|+|++++.++..+. ..|+ ++++.+
T Consensus 204 ~~-------------------~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~g 253 (264)
T 2pd6_A 204 QK-------------------VPQKVVDKITEM---------IPMGHLGDPEDVADVVAFLASEDSGYITGT--SVEVTG 253 (264)
T ss_dssp ----------------------------CTGGG---------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEEST
T ss_pred hh-------------------cCHHHHHHHHHh---------CCCCCCCCHHHHHHHHHHHcCCcccCCCCC--EEEECC
Confidence 21 001111111111 112357899999999999997543 2354 999988
Q ss_pred CC-cCHH
Q 011706 381 EQ-FSVN 386 (479)
Q Consensus 381 ~~-~s~~ 386 (479)
+. ++..
T Consensus 254 g~~~~~~ 260 (264)
T 2pd6_A 254 GLFMAEN 260 (264)
T ss_dssp TC-----
T ss_pred Cceeccc
Confidence 53 4433
No 117
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.93 E-value=1.8e-25 Score=213.45 Aligned_cols=242 Identities=14% Similarity=0.021 Sum_probs=168.9
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+.+++|+||||||+|+||.+++++|+++|++|++++|..... ..+..+.+.. .+.++.++.+|+
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~---------------~~~~~~~l~~-~~~~~~~~~~D~ 80 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKA---------------AEEVVAELKK-LGAQGVAIQADI 80 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHH---------------HHHHHHHHHh-cCCcEEEEEecC
Confidence 346789999999999999999999999999999998832211 0111111111 135788999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMG 232 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~ 232 (479)
+|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... + + +||++||..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~-~iv~~sS~~ 158 (274)
T 1ja9_A 81 SKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-G-RIILTSSIA 158 (274)
T ss_dssp TSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-E-EEEEECCGG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-C-EEEEEcChH
Confidence 9999998888743 6999999999764322 22345566788999999999999998775 4 4 999999976
Q ss_pred cc-cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 233 EY-GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 233 v~-g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
.+ .. ..+...|+.+|++.|.+++.++.++ |++++++|||.++++....
T Consensus 159 ~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~---- 210 (274)
T 1ja9_A 159 AVMTG------------------------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE---- 210 (274)
T ss_dssp GTCCS------------------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH----
T ss_pred hccCC------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhc----
Confidence 65 21 1235789999999999999999885 8999999999998874211
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
......+.+........+...+..+ ....++++++|+|++++.++..+.. .|+ +||+.++.
T Consensus 211 --~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~~~~~~G~--~~~v~gG~ 273 (274)
T 1ja9_A 211 --NSWHYAPGGYKGMPQEKIDEGLANM---------NPLKRIGYPADIGRAVSALCQEESEWINGQ--VIKLTGGG 273 (274)
T ss_dssp --HGGGTSTTCCTTCCHHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTC
T ss_pred --ccccccccccccCchHHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCcccccccCc--EEEecCCc
Confidence 0000000000000001122222222 2345789999999999999976433 455 99998753
No 118
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.93 E-value=2.3e-25 Score=213.67 Aligned_cols=254 Identities=16% Similarity=0.124 Sum_probs=172.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|........ ........+.+..+.... .+.++.++.+|++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~ 81 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVG----YPLATADDLAETVALVEK-TGRRCISAKVDVK 81 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCS----SCCCCHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccc----cccccHHHHHHHHHHHHh-cCCeEEEEeCCCC
Confidence 45789999999999999999999999999999999863321000 000000111111222221 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++. +.+.+ +||++||..
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~ 160 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG-RIVTVSSML 160 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECChh
Confidence 999998888754 7999999999865432 233566788899999999999999863 34555 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|++|.........
T Consensus 161 ~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~ 216 (281)
T 3s55_A 161 GHS------------------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFG 216 (281)
T ss_dssp GGS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHH
T ss_pred hcC------------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhc
Confidence 552 22346899999999999999999974 899999999999999754321100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.+..... ........ .... ........+.+++|+|++++.++..... .|+ ++++.++
T Consensus 217 ~~~~~~~-----~~~~~~~~-~~~~-------~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~--~i~vdgG 275 (281)
T 3s55_A 217 TMRPDLE-----KPTLKDVE-SVFA-------SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGT--VLPIDAG 275 (281)
T ss_dssp C------------CCHHHHH-HHHH-------HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ccccccc-----ccchhHHH-HHHH-------hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCC--EEEECCC
Confidence 0000000 00000000 0000 0012225789999999999999986544 355 9999885
No 119
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.93 E-value=7.5e-25 Score=209.52 Aligned_cols=232 Identities=11% Similarity=0.019 Sum_probs=168.7
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+.+++|++|||||+|+||.+++++|+++|++|++++|..... +......+.++.++.+|+
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--------------------~~~~~~~~~~~~~~~~Dv 82 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAA--------------------VRVANEIGSKAFGVRVDV 82 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH--------------------HHHHHHHCTTEEEEECCT
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--------------------HHHHHHhCCceEEEEecC
Confidence 456789999999999999999999999999999999864321 111111245788999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
+|.++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 83 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~iv~isS~ 161 (277)
T 4dqx_A 83 SSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGG-SIINTTSY 161 (277)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCE-EEEEECCG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc-EEEEECch
Confidence 9999998888754 7999999999765432 2335567888999999999999988843 3444 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 162 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---- 213 (277)
T 4dqx_A 162 TATS------------------------AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK---- 213 (277)
T ss_dssp GGTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH----
T ss_pred hhCc------------------------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh----
Confidence 6552 22347899999999999999999885 8999999999997763100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
.... ............. ......+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 214 --~~~~-------~~~~~~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s~~~~~itG~--~i~vdGG~ 269 (277)
T 4dqx_A 214 --IFAE-------AKDPAKLRSDFNA---------RAVMDRMGTAEEIAEAMLFLASDRSRFATGS--ILTVDGGS 269 (277)
T ss_dssp --HHHT-------CSCHHHHHHHHHT---------TSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESSSS
T ss_pred --hccc-------ccchhHHHHHHHh---------cCcccCCcCHHHHHHHHHHHhCCccCCCcCC--EEEECCch
Confidence 0000 0000111111211 22334678999999999999976543 455 99998853
No 120
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.93 E-value=5.4e-25 Score=209.06 Aligned_cols=235 Identities=14% Similarity=0.045 Sum_probs=165.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+. + ..++.++.+|++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~---~-~~~~~~~~~D~~ 68 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAA----------------QAVVAG---L-ENGGFAVEVDVT 68 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHT---C-TTCCEEEECCTT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHH---H-hcCCeEEEEeCC
Confidence 35689999999999999999999999999999998864321 111111 1 126788999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----C-CcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R-QECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g-~~~~~V~~SS~ 231 (479)
|+++++++++.. ++|+||||||...... ...+++++...+++|+.|+.++++++... + .+ +||++||.
T Consensus 69 d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g-~iv~isS~ 147 (263)
T 3ak4_A 69 KRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKG-VIVNTASL 147 (263)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe-EEEEeccc
Confidence 999998888743 7999999999764332 23355677889999999999999988643 3 34 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.||++.+.+++.++.++ |++++++|||.|+++.......
T Consensus 148 ~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~- 202 (263)
T 3ak4_A 148 AAKV------------------------GAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREII- 202 (263)
T ss_dssp GGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHH-
T ss_pred cccc------------------------CCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcc-
Confidence 6542 11236789999999999999999885 8999999999998874211000
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..... .+ .........+... .....+++++|+|++++.++..+.. .|+ +|++.++
T Consensus 203 ~~~~~----~~---~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~--~~~vdgG 259 (263)
T 3ak4_A 203 WEAEL----RG---MTPEAVRAEYVSL---------TPLGRIEEPEDVADVVVFLASDAARFMTGQ--GINVTGG 259 (263)
T ss_dssp HHHHH----HT---SCHHHHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESSS
T ss_pred ccccc----cc---cCcHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccCCCCC--EEEECcC
Confidence 00000 00 0001111112111 1234689999999999999976433 455 9999875
No 121
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.93 E-value=1.2e-24 Score=208.31 Aligned_cols=251 Identities=16% Similarity=0.083 Sum_probs=171.9
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++........ ........+.+..+.... .+.++.++.+|++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 84 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVP----YPLATPEELAATVKLVED-IGSRIVARQADVR 84 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCS----SCCCCHHHHHHHHHHHHH-HTCCEEEEECCTT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeccccccccc----ccccchHHHHHHHHHHHh-cCCeEEEEeCCCC
Confidence 56799999999999999999999999999999998863210000 000000111111222221 2457999999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGE 233 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v 233 (479)
|+++++++++.. ++|+||||||...... ..+++..++++|+.|+.++++++.. .+...+||++||...
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 161 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAGIAPMSA---GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG 161 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS---THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC---CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence 999998888753 7999999999765433 3456788999999999999998744 232239999999654
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+.... .+..+...|+.||++.+.+++.++.++ |+++++++||.|.++......
T Consensus 162 ~~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---- 217 (278)
T 3sx2_A 162 LAGVG--------------------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEF---- 217 (278)
T ss_dssp TSCCC--------------------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHH----
T ss_pred cCCCc--------------------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhh----
Confidence 42211 011235789999999999999999885 699999999999998654211
Q ss_pred hhcccCCCCcccchHHHHHHH-HhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQ-AAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
...++.. .........+.+... ..+++++|+|++++.++..... .|+ ++++.++.
T Consensus 218 --------------~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~--~i~vdGG~ 275 (278)
T 3sx2_A 218 --------------TREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGV--TLPVDAGF 275 (278)
T ss_dssp --------------HHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTTT
T ss_pred --------------HHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCC--EEeECCCc
Confidence 1111211 111221112233233 6789999999999999875443 455 99998753
No 122
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.93 E-value=7e-25 Score=206.24 Aligned_cols=226 Identities=15% Similarity=0.054 Sum_probs=163.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++|
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~D~~~ 68 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERA----------------KAVAEEIANKYGVKAHGVEMNLLS 68 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHHHHHCCCEEEEECCTTC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHHHHHHHhhcCCceEEEEccCCC
Confidence 5689999999999999999999999999999999854321 111111111123578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc-
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG- 232 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~- 232 (479)
+++++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++ ++.+.+ +||++||..
T Consensus 69 ~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~ 147 (248)
T 2pnf_A 69 EESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWG-RIVNISSVVG 147 (248)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCE-EEEEECCHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc-EEEEEccHHh
Confidence 99998888743 7999999999765322 22344567788999999998777665 345656 999999964
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.++. .+...|+.+|++.+.+++.+++++ |++++++|||.++++....
T Consensus 148 ~~~~-------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~----- 197 (248)
T 2pnf_A 148 FTGN-------------------------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV----- 197 (248)
T ss_dssp HHCC-------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-----
T ss_pred cCCC-------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-----
Confidence 3432 235789999999999999998874 7999999999999875321
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+........+ ...+++++|+|++++.++..... .|+ +|++.++
T Consensus 198 --------------~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg 246 (248)
T 2pnf_A 198 --------------LSEEIKQKYKEQIP---------LGRFGSPEEVANVVLFLCSELASYITGE--VIHVNGG 246 (248)
T ss_dssp --------------SCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------------ccHHHHHHHHhcCC---------CCCccCHHHHHHHHHHHhCchhhcCCCc--EEEeCCC
Confidence 00111122222211 23588999999999999976432 355 9999875
No 123
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.93 E-value=8.5e-25 Score=207.13 Aligned_cols=222 Identities=11% Similarity=0.026 Sum_probs=161.5
Q ss_pred CCCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 81 NDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 81 ~~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
.+.+++|+||||||+|+||.+++++|+++|++|++++|..... .+.+.. .++.++.+|
T Consensus 22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~------~~~~~~~~D 79 (260)
T 3gem_A 22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS----------------VTELRQ------AGAVALYGD 79 (260)
T ss_dssp -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHH----------------HHHHHH------HTCEEEECC
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHHHHh------cCCeEEECC
Confidence 3456789999999999999999999999999999999864321 111111 247889999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
++|+++++++++.. ++|+||||||.........+++++.+++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 80 v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g-~iv~isS~ 158 (260)
T 3gem_A 80 FSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVA-DIVHISDD 158 (260)
T ss_dssp TTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC-EEEEECCG
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-EEEEECCh
Confidence 99999998888753 69999999997655444445667888999999999999998854 3444 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh--CCceEEeecCeeecCCCCchhhhH
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
..+. +..+...|+.||++.+.+++.++.++ ++++++++||.|..+....
T Consensus 159 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~----- 209 (260)
T 3gem_A 159 VTRK------------------------GSSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD----- 209 (260)
T ss_dssp GGGT------------------------CCSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------
T ss_pred hhcC------------------------CCCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-----
Confidence 6542 22346899999999999999999987 4999999999998764221
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
..+....... ....-+..++|+|++++.+++.....|+ ++++.++
T Consensus 210 ----------------~~~~~~~~~~---------~p~~r~~~~edva~~v~~L~~~~~itG~--~i~vdGG 254 (260)
T 3gem_A 210 ----------------AAYRANALAK---------SALGIEPGAEVIYQSLRYLLDSTYVTGT--TLTVNGG 254 (260)
T ss_dssp -----------------------------------CCSCCCCCTHHHHHHHHHHHHCSSCCSC--EEEESTT
T ss_pred ----------------HHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhhCCCCCCC--EEEECCC
Confidence 1111111111 1223456789999999999976666676 9999885
No 124
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.93 E-value=1.1e-24 Score=205.28 Aligned_cols=226 Identities=15% Similarity=0.055 Sum_probs=160.3
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
...++|+||||||+|+||.+++++|+++|++|++++|.... ++........++.++.+|+
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--------------------~~~~~~~~~~~~~~~~~D~ 69 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEK--------------------LKSLGNALKDNYTIEVCNL 69 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHHHCSSEEEEECCT
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH--------------------HHHHHHHhccCccEEEcCC
Confidence 35578999999999999999999999999999999985432 1111111124788999999
Q ss_pred CChHHHHHHhhhc-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccccc
Q 011706 162 CDFEFLSESFKSF-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGEYG 235 (479)
Q Consensus 162 ~d~~~~~~~~~~~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v~g 235 (479)
++.+++.++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++.. .+.+ +||++||...+.
T Consensus 70 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~ 148 (249)
T 3f9i_A 70 ANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYG-RIINISSIVGIA 148 (249)
T ss_dssp TSHHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCCCC--
T ss_pred CCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-EEEEEccHHhcc
Confidence 9999999999865 6999999999765332 2235567788999999999999888743 4445 999999965542
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+..+...|+.||++.+.+++.++.++ |+++++++||.|.++.....
T Consensus 149 ------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------- 197 (249)
T 3f9i_A 149 ------------------------GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL------- 197 (249)
T ss_dssp ------------------------CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C-------
T ss_pred ------------------------CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc-------
Confidence 22346899999999999999999874 89999999999988753210
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
..........+ .....+.+++|+|++++.++..+.. .|+ +|++.++.
T Consensus 198 ------------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~~tG~--~~~vdgG~ 246 (249)
T 3f9i_A 198 ------------NEKQREAIVQK---------IPLGTYGIPEDVAYAVAFLASNNASYITGQ--TLHVNGGM 246 (249)
T ss_dssp ------------CHHHHHHHHHH---------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred ------------CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCCccCCccCc--EEEECCCE
Confidence 11122222221 2335688999999999999986544 355 99998864
No 125
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.93 E-value=2e-24 Score=204.34 Aligned_cols=230 Identities=11% Similarity=0.034 Sum_probs=167.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dv~ 65 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKL----------------EEAKLEIEQ-FPGQILTVQMDVR 65 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHCC-STTCEEEEECCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEEccCC
Confidence 35789999999999999999999999999999999865421 111222221 2357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH-----HcCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK-----EFRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~-----~~g~~~~~V~~SS~ 231 (479)
|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 66 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g-~iv~isS~ 144 (257)
T 3imf_A 66 NTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKG-NIINMVAT 144 (257)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCc-EEEEECch
Confidence 999998888754 7999999999754432 334566788899999999999999883 22344 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH----hCCceEEeecCeeecCCCCchhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA----WGIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
..+. +......|+.||++.+.+++.++.+ +|+++++++||.|.++.......
T Consensus 145 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~ 200 (257)
T 3imf_A 145 YAWD------------------------AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLW 200 (257)
T ss_dssp GGGS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC----
T ss_pred hhcc------------------------CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcc
Confidence 5542 2234688999999999999988865 38999999999999886432100
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+....... .....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 201 ----------------~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~itG~--~i~vdGG 249 (257)
T 3imf_A 201 ----------------ISEEMAKRTIQS---------VPLGRLGTPEEIAGLAYYLCSDEAAYINGT--CMTMDGG 249 (257)
T ss_dssp -------------------CCSHHHHTT---------STTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ----------------cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCchhcCccCC--EEEECCC
Confidence 000011111111 2234578999999999999976543 455 9999885
No 126
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.93 E-value=1.1e-24 Score=206.08 Aligned_cols=225 Identities=12% Similarity=0.041 Sum_probs=161.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|.... . +..+.+ .. .++.+|++|
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~----------------~~~~~~-----~~-~~~~~D~~~ 60 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-K----------------EVAEAI-----GG-AFFQVDLED 60 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-H----------------HHHHHH-----TC-EEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-H----------------HHHHHh-----hC-CEEEeeCCC
Confidence 568999999999999999999999999999999886431 0 111111 13 788999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+.+ +||++||...
T Consensus 61 ~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~~ 139 (256)
T 2d1y_A 61 ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG-AIVNVASVQG 139 (256)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEccccc
Confidence 99988887653 7999999999765332 2234556788999999999999988754 3455 9999999654
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+...|+.||++.+.+++.++.++ |+++++++||.+.++..
T Consensus 140 ~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------- 187 (256)
T 2d1y_A 140 LF------------------------AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV-------- 187 (256)
T ss_dssp TS------------------------BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--------
T ss_pred cC------------------------CCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh--------
Confidence 32 11236789999999999999999885 89999999999976521
Q ss_pred hhcccCCCCcccchHHHHHHHHh-cCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAA-VGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..++.... .......+........+++++|+|++++.++..+.. .|+ +|++.++
T Consensus 188 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~--~~~v~gG 244 (256)
T 2d1y_A 188 ---------------LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGA--ILPVDGG 244 (256)
T ss_dssp ---------------HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCC--EEEECCC
Confidence 11100000 000000111222345789999999999999976533 454 9999885
No 127
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.93 E-value=1.2e-24 Score=206.66 Aligned_cols=229 Identities=12% Similarity=0.099 Sum_probs=166.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
..+|+||||||+|+||.+++++|+++|++|+++++...... +.........+.++.++.+|++|
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~Dl~~ 68 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAM----------------ETMKETYKDVEERLQFVQADVTK 68 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------------HHHHHHTGGGGGGEEEEECCTTS
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHH----------------HHHHHHHHhcCCceEEEEecCCC
Confidence 35789999999999999999999999999999987643211 11111111223578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEccccc--Cc-ccccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQR--SA-PYSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTM 231 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~--~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~ 231 (479)
+++++++++.. ++|+||||||.. .. .....+.+++..++++|+.|+.++++++ ++.+.+ +||++||.
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~iss~ 147 (264)
T 3i4f_A 69 KEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFG-RIINYGFQ 147 (264)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC-eEEEEeec
Confidence 99999888754 799999999942 21 2223355667888999999999999988 555655 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
+.++.. +..+...|+.+|++.+.+++.++.+ .|+++++++||.|+++....
T Consensus 148 ~~~~~~----------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---- 201 (264)
T 3i4f_A 148 GADSAP----------------------GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA---- 201 (264)
T ss_dssp TGGGCC----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC----
T ss_pred hhcccC----------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh----
Confidence 554322 2234689999999999999999988 58999999999999885432
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
........... ......+.+++|+|++++.++..... .|+ ++++.++
T Consensus 202 ---------------~~~~~~~~~~~---------~~p~~r~~~~~dva~~v~~l~s~~~~~itG~--~i~vdGG 250 (264)
T 3i4f_A 202 ---------------TIQEARQLKEH---------NTPIGRSGTGEDIARTISFLCEDDSDMITGT--IIEVTGA 250 (264)
T ss_dssp ---------------CHHHHHHC-----------------CCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESCS
T ss_pred ---------------ccHHHHHHHhh---------cCCCCCCcCHHHHHHHHHHHcCcccCCCCCc--EEEEcCc
Confidence 11222111111 12234578999999999999986543 355 9999875
No 128
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.93 E-value=1.4e-24 Score=205.73 Aligned_cols=218 Identities=14% Similarity=0.059 Sum_probs=161.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||++++++|+++|++|++++|..... .+..+.+ ..++.++.+|++|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~D~~~ 64 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG----------------KAMAAEL----ADAARYVHLDVTQ 64 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHT----GGGEEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHh----hcCceEEEecCCC
Confidence 5689999999999999999999999999999998864321 1111111 1247889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++ ++.+.+ +||++||...
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~ 143 (260)
T 1nff_A 65 PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG-SIINISSIEG 143 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEeehhh
Confidence 99998888743 7999999999764322 22345567889999999997776655 445555 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+.. ..+...|+.||++.+.+++.++.+ .|++++++|||.|+++....
T Consensus 144 ~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------ 193 (260)
T 1nff_A 144 LAG------------------------TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW------ 193 (260)
T ss_dssp TSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT------
T ss_pred cCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc------
Confidence 532 123678999999999999999987 48999999999999884210
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+ . ......+.+++|+|++++.++..+.. .|+ +|++.++
T Consensus 194 -----------------------~~~~~--~--~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~--~~~v~gG 237 (260)
T 1nff_A 194 -----------------------VPEDI--F--QTALGRAAEPVEVSNLVVYLASDESSYSTGA--EFVVDGG 237 (260)
T ss_dssp -----------------------SCTTC--S--CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -----------------------chhhH--H--hCccCCCCCHHHHHHHHHHHhCccccCCcCC--EEEECCC
Confidence 00000 0 11224578999999999999875433 354 9999875
No 129
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.93 E-value=2.5e-24 Score=203.73 Aligned_cols=229 Identities=14% Similarity=0.117 Sum_probs=167.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIV-DSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~-dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
++|+||||||+|+||.+++++|+++|++|+++ +|.... ..+..+.+.. .+.++.++.+|++|
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~----------------~~~~~~~~~~-~~~~~~~~~~Dv~~ 65 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKA----------------ALETAEEIEK-LGVKVLVVKANVGQ 65 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHH----------------HHHHHHHHHT-TTCCEEEEECCTTC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHH----------------HHHHHHHHHh-cCCcEEEEEcCCCC
Confidence 57899999999999999999999999999987 443221 1111222221 24578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||...
T Consensus 66 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~~ 144 (258)
T 3oid_A 66 PAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGG-HIVSISSLGS 144 (258)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE-EEEEEEEGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECchhh
Confidence 99998888754 7899999999754432 234566788899999999999999884 34445 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 145 ~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---- 196 (258)
T 3oid_A 145 IR------------------------YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP---- 196 (258)
T ss_dssp TS------------------------BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT----
T ss_pred CC------------------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc----
Confidence 42 22347899999999999999999985 799999999999877432110
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
....+........ ....+.+++|+|++++.++......-.++++++.++
T Consensus 197 -------------~~~~~~~~~~~~~---------p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG 245 (258)
T 3oid_A 197 -------------NREDLLEDARQNT---------PAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245 (258)
T ss_dssp -------------THHHHHHHHHHHC---------TTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred -------------cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 0112222222222 224678999999999999987554322349999885
No 130
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.93 E-value=4.9e-25 Score=207.19 Aligned_cols=226 Identities=16% Similarity=0.153 Sum_probs=153.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~---------------~~~~~~~~~~-~~~~~~~~~~D~~~ 66 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS---------------LDATAEEFKA-AGINVVVAKGDVKN 66 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSH---------------HHHHHHHHHH-TTCCEEEEESCTTS
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHH---------------HHHHHHHHHh-cCCcEEEEECCCCC
Confidence 4689999999999999999999999999999985432210 1111111111 23578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc-c
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM-G 232 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~-~ 232 (479)
+++++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++.. .+.+ +||++||. +
T Consensus 67 ~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~ 145 (247)
T 2hq1_A 67 PEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG-KIINITSIAG 145 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCE-EEEEECC---
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcChhh
Confidence 99998888753 7999999999754322 2234556788899999999998888754 4555 99999995 4
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.|+.+ +...|+.+|++.|.+++.++.++ |+++++++||.+.++...
T Consensus 146 ~~~~~-------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------ 194 (247)
T 2hq1_A 146 IIGNA-------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD------ 194 (247)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------
T ss_pred ccCCC-------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh------
Confidence 45432 25789999999999999998885 899999999998765210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.....+...+..+ .....+++++|+|++++.++..+.. .|+ +||+.++
T Consensus 195 -------------~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gG 244 (247)
T 2hq1_A 195 -------------VLPDKVKEMYLNN---------IPLKRFGTPEEVANVVGFLASDDSNYITGQ--VINIDGG 244 (247)
T ss_dssp -------------TSCHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -------------hcchHHHHHHHhh---------CCCCCCCCHHHHHHHHHHHcCcccccccCc--EEEeCCC
Confidence 0001122222222 1234688999999999999876432 455 9999875
No 131
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.93 E-value=3.8e-25 Score=210.68 Aligned_cols=231 Identities=13% Similarity=0.024 Sum_probs=167.3
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
...++|+||||||+|+||.+++++|+++|++|++++|..... ...+..+.+|+
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------------------~~~~~~~~~Dv 62 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------------------VNVSDHFKIDV 62 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------------------TTSSEEEECCT
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------------------cCceeEEEecC
Confidence 356799999999999999999999999999999998754311 12567789999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
+|.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 63 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~ 141 (269)
T 3vtz_A 63 TNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHG-SIINIASV 141 (269)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEECch
Confidence 9999998888754 7999999999865433 2335567788999999999999988754 4555 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh--CCceEEeecCeeecCCCCchhhhH
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
..+.. ......|+.||++.+.+++.++.++ ++++++++||.|.++.......
T Consensus 142 ~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~-- 195 (269)
T 3vtz_A 142 QSYAA------------------------TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAK-- 195 (269)
T ss_dssp GGTSB------------------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHH--
T ss_pred hhccC------------------------CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhh--
Confidence 66532 2346899999999999999999987 7999999999998763211000
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
. .. +............+... .....+.+++|+|++++.++......-.++++++.++
T Consensus 196 ~--~~----~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 252 (269)
T 3vtz_A 196 M--EV----GEDENAVERKIEEWGRQ---------HPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG 252 (269)
T ss_dssp H--HH----CCSTTHHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c--cc----cccchhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence 0 00 00000111222222221 2234678999999999999976544222249999886
No 132
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.93 E-value=5e-25 Score=208.43 Aligned_cols=230 Identities=15% Similarity=0.154 Sum_probs=166.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecc-cccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSL-IRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++|. ... +.+..+.+.. .+.++.++.+|++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~-~~~~~~~~~~D~~ 67 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN----------------IDETIASMRA-DGGDAAFFAADLA 67 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------------HHHHHHHHHH-TTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhh----------------HHHHHHHHHh-cCCceEEEECCCC
Confidence 467899999999999999999999999999999986 221 1111111211 1357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccc-cCcc-cccccccccchhhhhhHHHHHHHHHHHHHc----C--C--cceEEE
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQ-RSAP-YSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R--Q--ECHLVK 227 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~-~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g--~--~~~~V~ 227 (479)
|+++++++++.. ++|+||||||. .... ....+.+++..++++|+.|+.++++++... + . ..+||+
T Consensus 68 ~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 147 (258)
T 3afn_B 68 TSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVIS 147 (258)
T ss_dssp SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEE
Confidence 999998888744 79999999996 3222 222344557788999999999999877431 2 1 139999
Q ss_pred eeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCc
Q 011706 228 LGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDE 304 (479)
Q Consensus 228 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~ 304 (479)
+||...+.. +..+...|+.+|++.|.+++.++.++ |++++++|||.++++....
T Consensus 148 ~sS~~~~~~-----------------------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (258)
T 3afn_B 148 TGSIAGHTG-----------------------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD 204 (258)
T ss_dssp ECCTHHHHC-----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred ecchhhccC-----------------------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence 999765531 11236799999999999999998875 8999999999999985321
Q ss_pred hhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC---CCCCceEEEeCCC
Q 011706 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA---QPGEFRVFNQFTE 381 (479)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~~~~ni~~~ 381 (479)
....+...+..+.+ ...+++++|+|++++.++..+. ..|+ +|++.++
T Consensus 205 -------------------~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~~G~--~~~v~gg 254 (258)
T 3afn_B 205 -------------------KTQDVRDRISNGIP---------MGRFGTAEEMAPAFLFFASHLASGYITGQ--VLDINGG 254 (258)
T ss_dssp -------------------CCHHHHHHHHTTCT---------TCSCBCGGGTHHHHHHHHCHHHHTTCCSE--EEEESTT
T ss_pred -------------------cCHHHHHHHhccCC---------CCcCCCHHHHHHHHHHHhCcchhccccCC--EEeECCC
Confidence 01223333333322 3468999999999999987542 2354 9999886
Q ss_pred Cc
Q 011706 382 QF 383 (479)
Q Consensus 382 ~~ 383 (479)
..
T Consensus 255 ~~ 256 (258)
T 3afn_B 255 QY 256 (258)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 133
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.93 E-value=2.3e-24 Score=203.61 Aligned_cols=223 Identities=15% Similarity=0.057 Sum_probs=161.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+ +.++.++.+|++|
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~D~~~ 62 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----------------AATAREL----GDAARYQHLDVTI 62 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHTT----GGGEEEEECCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHh----CCceeEEEecCCC
Confidence 5689999999999999999999999999999998864311 1111111 3468889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHH----HHHcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFA----MKEFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~----a~~~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.+++++ +++.+.+ +||++||...
T Consensus 63 ~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~ 141 (254)
T 1hdc_A 63 EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG-SIVNISSAAG 141 (254)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEECchhh
Confidence 99988887643 6999999999764322 2335567788999999999866554 4555655 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+...|+.||++.+.+++.++.++ |+++++++||.|+++..
T Consensus 142 ~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------- 189 (254)
T 1hdc_A 142 LM------------------------GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-------- 189 (254)
T ss_dssp TS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--------
T ss_pred cc------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc--------
Confidence 52 12336899999999999999999874 89999999999988631
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccc-cHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYL-DIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.. .. ......+........+. +++|+|++++.++..+.. .|+ ++++.++
T Consensus 190 ---------------~~----~~-~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~--~~~vdgG 241 (254)
T 1hdc_A 190 ---------------AE----TG-IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA--ELAVDGG 241 (254)
T ss_dssp ---------------HH----HT-CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------cc----cc-hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCC--EEEECCC
Confidence 01 00 00000000111223467 999999999999976433 455 9999875
No 134
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.93 E-value=3.6e-24 Score=201.77 Aligned_cols=226 Identities=15% Similarity=0.069 Sum_probs=155.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|.... . ..++.++.+|++
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~------------------------~---~~~~~~~~~D~~ 56 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ------------------------E---QYPFATEVMDVA 56 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS------------------------S---CCSSEEEECCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh------------------------h---cCCceEEEcCCC
Confidence 3578999999999999999999999999999999875320 0 013778899999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++ ++.+.+ +||++||..
T Consensus 57 d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~ 135 (250)
T 2fwm_X 57 DAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG-AIVTVASDA 135 (250)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC-EEEEECchh
Confidence 999998888743 6999999999754322 22355677889999999999999988 445555 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.+|++.+.+++.++.++ |+++++++||.|+++.......
T Consensus 136 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-- 189 (250)
T 2fwm_X 136 AHT------------------------PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-- 189 (250)
T ss_dssp GTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------
T ss_pred hCC------------------------CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc--
Confidence 552 22346899999999999999999885 8999999999999885321000
Q ss_pred hhhcccCCCCcccchHHHHHH-HHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
...... .+..-. ..+........+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 190 ---------------~~~~~~~~~~~~~--~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~--~i~vdGG 245 (250)
T 2fwm_X 190 ---------------SDDAEEQRIRGFG--EQFKLGIPLGKIARPQEIANTILFLASDLASHITLQ--DIVVDGG 245 (250)
T ss_dssp -------------------------------------------CHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------ChhHHHHHHhhhh--hcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCC--EEEECCC
Confidence 000000 000000 0000011223478999999999999976433 455 8998875
No 135
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.93 E-value=2.9e-25 Score=210.51 Aligned_cols=229 Identities=14% Similarity=0.031 Sum_probs=166.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~D~~ 73 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENV----------------DRTVATLQG-EGLSVTGTVCHVG 73 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCceEEEEccCC
Confidence 45789999999999999999999999999999999864321 111112211 1346888999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~ 231 (479)
|.++++++++.. ++|+||||||.... +....+++++..++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 74 ~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g-~iv~isS~ 152 (260)
T 2zat_A 74 KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGG-SVLIVSSV 152 (260)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEEech
Confidence 999888887643 79999999997532 22233556678899999999999998874 34555 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+.. ..+...|+.+|++.+.+++.++.++ |+++++++||.|.++......
T Consensus 153 ~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-- 206 (260)
T 2zat_A 153 GAYHP------------------------FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLW-- 206 (260)
T ss_dssp GGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHH--
T ss_pred hhcCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcc--
Confidence 76632 2346899999999999999999885 899999999999887532100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.. .......... .....+.+++|+|++++.++..+.. .|+ +|++.++
T Consensus 207 -------------~~--~~~~~~~~~~---------~~~~~~~~~~dva~~v~~l~s~~~~~~tG~--~~~vdgG 255 (260)
T 2zat_A 207 -------------MD--KARKEYMKES---------LRIRRLGNPEDCAGIVSFLCSEDASYITGE--TVVVGGG 255 (260)
T ss_dssp -------------SS--HHHHHHHHHH---------HTCSSCBCGGGGHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred -------------cC--hHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccCCccCC--EEEECCC
Confidence 00 0000111110 1234678999999999999876543 455 9999985
No 136
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.93 E-value=2.6e-24 Score=205.83 Aligned_cols=226 Identities=13% Similarity=0.079 Sum_probs=163.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec-ccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS-LIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++| .... +.+..+.+....+.++.++.+|++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~Dl~ 72 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA----------------AQRLVAELNAARAGSAVLCKGDLS 72 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH----------------HHHHHHHHHHHSTTCEEEEECCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHH----------------HHHHHHHHHHhcCCceEEEeccCC
Confidence 46889999999999999999999999999999998 4321 111112221111357889999999
Q ss_pred Ch----HHHHHHhhhc-----CCCEEEEcccccCccc-ccccc-----------cccchhhhhhHHHHHHHHHHHHHc--
Q 011706 163 DF----EFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDR-----------SRAVFTQHNNVIGTLNVLFAMKEF-- 219 (479)
Q Consensus 163 d~----~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~-----------~~~~~~~~~Nv~g~~~ll~~a~~~-- 219 (479)
|. ++++++++.. ++|+||||||...... ...+. +++..++++|+.|+.++++++...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (276)
T 1mxh_A 73 LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG 152 (276)
T ss_dssp SSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-
T ss_pred CccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence 99 8888887643 6999999999754322 22233 567788999999999999999874
Q ss_pred -CC------cceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCce
Q 011706 220 -RQ------ECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRA 289 (479)
Q Consensus 220 -g~------~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~ 289 (479)
+. + +||++||...+. +..+...|+.||++.+.+++.++.++ |+++
T Consensus 153 ~~~~~~~~~g-~iv~isS~~~~~------------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v 207 (276)
T 1mxh_A 153 EGGAWRSRNL-SVVNLCDAMTDL------------------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRV 207 (276)
T ss_dssp ------CCCE-EEEEECCGGGGS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred cCCCCCCCCc-EEEEECchhhcC------------------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence 33 4 999999976553 22346799999999999999999885 8999
Q ss_pred EEeecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 290 TDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 290 ~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
++++||.|++| ... ...+...+....++ .+++.+++|+|++++.++.....
T Consensus 208 ~~v~PG~v~t~-~~~--------------------~~~~~~~~~~~~p~--------~r~~~~~~dva~~v~~l~s~~~~ 258 (276)
T 1mxh_A 208 NAVAPGLSLLP-PAM--------------------PQETQEEYRRKVPL--------GQSEASAAQIADAIAFLVSKDAG 258 (276)
T ss_dssp EEEEESSBSCC-SSS--------------------CHHHHHHHHTTCTT--------TSCCBCHHHHHHHHHHHHSGGGT
T ss_pred EEEecCcccCC-ccC--------------------CHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCcccc
Confidence 99999999998 211 01222222222211 12378999999999999975433
Q ss_pred --CCCceEEEeCCC
Q 011706 370 --PGEFRVFNQFTE 381 (479)
Q Consensus 370 --~g~~~~~ni~~~ 381 (479)
.|+ ++++.++
T Consensus 259 ~~tG~--~~~vdgG 270 (276)
T 1mxh_A 259 YITGT--TLKVDGG 270 (276)
T ss_dssp TCCSC--EEEESTT
T ss_pred CccCc--EEEECCc
Confidence 355 9999875
No 137
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.93 E-value=3.3e-24 Score=204.15 Aligned_cols=226 Identities=16% Similarity=0.122 Sum_probs=168.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~D~~ 88 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGA---------------ADEVVAAIAA-AGGEAFAVKADVS 88 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHH---------------HHHHHHHHHh-cCCcEEEEECCCC
Confidence 46789999999999999999999999999999988743321 1111112211 2457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++. +.+.+ +||++||..
T Consensus 89 d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~ 167 (269)
T 4dmm_A 89 QESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG-RIINIASVV 167 (269)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECchh
Confidence 999998888754 7999999999865432 233566788899999999999999874 34555 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 168 ~~~------------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----- 218 (269)
T 4dmm_A 168 GEM------------------------GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----- 218 (269)
T ss_dssp HHH------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH-----
T ss_pred hcC------------------------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc-----
Confidence 432 11236899999999999999999874 8999999999999886431
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC---CCCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA---QPGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~~~~ni~~~~ 382 (479)
. ........ .....+.+++|+|++++.++..+. ..|+ ++++.++.
T Consensus 219 ---------------~--~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~--~i~vdGG~ 266 (269)
T 4dmm_A 219 ---------------L--AAEKLLEV---------IPLGRYGEAAEVAGVVRFLAADPAAAYITGQ--VINIDGGL 266 (269)
T ss_dssp ---------------H--HHHHHGGG---------CTTSSCBCHHHHHHHHHHHHHCGGGGGCCSC--EEEESTTS
T ss_pred ---------------c--cHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCCcccCCCcCC--EEEECCCe
Confidence 0 01122222 123467899999999999998742 2365 99998753
No 138
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.93 E-value=1.9e-24 Score=203.38 Aligned_cols=225 Identities=13% Similarity=0.071 Sum_probs=167.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+ ..++..+.+|++
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~Dv~ 65 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA----------------QAISDYL----GDNGKGMALNVT 65 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHH----GGGEEEEECCTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHh----cccceEEEEeCC
Confidence 45789999999999999999999999999999998864321 1111111 235788999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 66 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~ 144 (248)
T 3op4_A 66 NPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQG-RIINVGSVV 144 (248)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEEcchh
Confidence 999998888754 7999999999865433 2335667888999999999999998854 4555 999999954
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 145 ~~~------------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---- 196 (248)
T 3op4_A 145 GTM------------------------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL---- 196 (248)
T ss_dssp HHH------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS----
T ss_pred hcC------------------------CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc----
Confidence 432 22346899999999999999999875 89999999999987753210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
............ ....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 197 ---------------~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~~~itG~--~i~vdgG~ 245 (248)
T 3op4_A 197 ---------------NDEQRTATLAQV---------PAGRLGDPREIASAVAFLASPEAAYITGE--TLHVNGGM 245 (248)
T ss_dssp ---------------CHHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred ---------------CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCCccCCccCc--EEEECCCe
Confidence 011122222221 234678999999999999875544 355 99998753
No 139
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.92 E-value=4.9e-25 Score=200.74 Aligned_cols=191 Identities=14% Similarity=0.118 Sum_probs=150.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+||||||+|+||++++++|+ +|++|++++|... .+.+|++|+++
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------------------~~~~D~~~~~~ 48 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------------------DVTVDITNIDS 48 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------------------SEECCTTCHHH
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------------------ceeeecCCHHH
Confidence 489999999999999999999 9999999987421 46899999999
Q ss_pred HHHHhhhc-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccccccCCCCCC
Q 011706 167 LSESFKSF-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMGEYGTPNIDI 241 (479)
Q Consensus 167 ~~~~~~~~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~v~g~~~~~~ 241 (479)
++++++.. ++|+||||||...... ...+++++...+++|+.|+.++++++.+. + .+||++||...+.
T Consensus 49 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~------ 120 (202)
T 3d7l_A 49 IKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMED------ 120 (202)
T ss_dssp HHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTS------
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcC------
Confidence 99998854 5899999999754332 22344566788899999999999999876 4 4999999975542
Q ss_pred cCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh--CCceEEeecCeeecCCCCchhhhHhhhcccCCCC
Q 011706 242 EEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETAMHEELCNRLDYDG 319 (479)
Q Consensus 242 ~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g 319 (479)
+..+...|+.+|++.|.+++.++.++ |++++++|||.++++..
T Consensus 121 ------------------~~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------------- 165 (202)
T 3d7l_A 121 ------------------PIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------------- 165 (202)
T ss_dssp ------------------CCTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH-----------------
T ss_pred ------------------CCCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh-----------------
Confidence 22346899999999999999988764 89999999999998731
Q ss_pred cccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEe
Q 011706 320 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQ 378 (479)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni 378 (479)
. . ++....+++++++|+|++++.++.. ...|+ +||+
T Consensus 166 -------~----~---------~~~~~~~~~~~~~dva~~~~~~~~~-~~~G~--~~~v 201 (202)
T 3d7l_A 166 -------K----L---------EPFFEGFLPVPAAKVARAFEKSVFG-AQTGE--SYQV 201 (202)
T ss_dssp -------H----H---------GGGSTTCCCBCHHHHHHHHHHHHHS-CCCSC--EEEE
T ss_pred -------h----h---------hhhccccCCCCHHHHHHHHHHhhhc-cccCc--eEec
Confidence 1 0 1112346789999999999998854 33455 8886
No 140
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.92 E-value=9e-25 Score=208.90 Aligned_cols=232 Identities=13% Similarity=0.003 Sum_probs=165.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+ +.++.++.+|++
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~Dv~ 85 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAA----------------DAAATKI----GCGAAACRVDVS 85 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHH----CSSCEEEECCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHc----CCcceEEEecCC
Confidence 46789999999999999999999999999999999864321 1111111 457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 86 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~Iv~isS~~ 164 (277)
T 3gvc_A 86 DEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGG-AIVNLSSLA 164 (277)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEcchh
Confidence 999988887754 7999999999865432 2345667888999999999999988854 4444 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.+ +|+++++++||.|++|.....
T Consensus 165 ~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---- 216 (277)
T 3gvc_A 165 GQV------------------------AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTA---- 216 (277)
T ss_dssp GTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH----
T ss_pred hcc------------------------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHh----
Confidence 442 2234689999999999999999988 489999999999988732100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
... .............. ......+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 217 --~~~-~~~~~~~~~~~~~~--------------~~~~~r~~~pedvA~~v~~L~s~~a~~itG~--~i~vdGG~ 272 (277)
T 3gvc_A 217 --MAM-FDGALGAGGARSMI--------------ARLQGRMAAPEEMAGIVVFLLSDDASMITGT--TQIADGGT 272 (277)
T ss_dssp --HTC-C------CCHHHHH--------------HHHHSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTG
T ss_pred --hhc-chhhHHHHhhhhhh--------------hccccCCCCHHHHHHHHHHHcCCccCCccCc--EEEECCcc
Confidence 000 00000000000000 01123578999999999999976443 455 99998853
No 141
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.92 E-value=3.8e-24 Score=201.24 Aligned_cols=228 Identities=13% Similarity=0.074 Sum_probs=169.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~ 64 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASA----------------EKFENSMKE-KGFKARGLVLNIS 64 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCceEEEEecCC
Confidence 35689999999999999999999999999999999865321 111111211 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 65 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~isS~~ 143 (247)
T 3lyl_A 65 DIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWG-RIISIGSVV 143 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe-EEEEEcchh
Confidence 999998888754 6899999999865432 2335567788999999999999988754 3444 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 144 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---- 195 (247)
T 3lyl_A 144 GSA------------------------GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL---- 195 (247)
T ss_dssp HHH------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS----
T ss_pred hcc------------------------CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc----
Confidence 442 12336899999999999999999874 89999999999988754321
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
........... .....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 196 ---------------~~~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~s~~~~~~tG~--~i~vdgG~ 244 (247)
T 3lyl_A 196 ---------------TDEQKSFIATK---------IPSGQIGEPKDIAAAVAFLASEEAKYITGQ--TLHVNGGM 244 (247)
T ss_dssp ---------------CHHHHHHHHTT---------STTCCCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred ---------------cHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHhCCCcCCccCC--EEEECCCE
Confidence 11112222221 2335688999999999999976544 355 99998753
No 142
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.92 E-value=2.4e-24 Score=205.60 Aligned_cols=229 Identities=14% Similarity=0.079 Sum_probs=168.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++... ..+..+.+.. .+.++.++.+|++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-----------------~~~~~~~~~~-~~~~~~~~~~Dv~ 89 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-----------------VKEVADEIAD-GGGSAEAVVADLA 89 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-----------------HHHHHHHHHT-TTCEEEEEECCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-----------------HHHHHHHHHh-cCCcEEEEEecCC
Confidence 467899999999999999999999999999999985422 1111222211 2457899999999
Q ss_pred ChHHHHHHhhhc----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 163 DFEFLSESFKSF----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 163 d~~~~~~~~~~~----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
|.++++++.+.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||...
T Consensus 90 d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~IV~isS~~~ 168 (273)
T 3uf0_A 90 DLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG-RIVTIASMLS 168 (273)
T ss_dssp CHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEEcchHh
Confidence 999888775432 7999999999865433 233666788899999999999999873 34555 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+...|+.||++.+.+++.++.+ .|+++++++||.|.++......
T Consensus 169 ~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---- 220 (273)
T 3uf0_A 169 FQ------------------------GGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR---- 220 (273)
T ss_dssp TS------------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH----
T ss_pred cC------------------------CCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc----
Confidence 42 2234689999999999999999988 5899999999999987532100
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
........+.... ....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 221 -------------~~~~~~~~~~~~~---------p~~r~~~pedva~~v~~L~s~~a~~itG~--~i~vdGG~ 270 (273)
T 3uf0_A 221 -------------ADDERAAEITARI---------PAGRWATPEDMVGPAVFLASDAASYVHGQ--VLAVDGGW 270 (273)
T ss_dssp -------------TSHHHHHHHHHHS---------TTSSCBCGGGGHHHHHHHHSGGGTTCCSC--EEEESTTG
T ss_pred -------------cCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCchhcCCcCC--EEEECcCc
Confidence 0011222222221 224678899999999999976443 455 99998753
No 143
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.92 E-value=2.6e-24 Score=203.40 Aligned_cols=235 Identities=10% Similarity=0.011 Sum_probs=164.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|.... +..+.+.. .+.++.++.+|++|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~------------------~~~~~l~~-~~~~~~~~~~D~~~ 62 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA------------------PALAEIAR-HGVKAVHHPADLSD 62 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH------------------HHHHHHHT-TSCCEEEECCCTTS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH------------------HHHHHHHh-cCCceEEEeCCCCC
Confidence 468999999999999999999999999999999875320 11111111 13468889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++ ++.+.+ +||++||...
T Consensus 63 ~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~ 141 (255)
T 2q2v_A 63 VAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWG-RIINIASVHG 141 (255)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEEcCchh
Confidence 99998888743 7999999999764322 23355677889999999888877766 455555 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+.. ..+...|+.+|++.+.+++.++.++ |+++++++||.|++|...... ..
T Consensus 142 ~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~ 195 (255)
T 2q2v_A 142 LVG------------------------STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQI--DD 195 (255)
T ss_dssp TSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHH--HH
T ss_pred ccC------------------------CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhc--cc
Confidence 532 1236789999999999999999884 799999999999987421000 00
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
... ...........+. ........+++++|+|++++.++..+.. .|+ +|++.++
T Consensus 196 -~~~------~~~~~~~~~~~~~--------~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~--~~~vdgG 251 (255)
T 2q2v_A 196 -RAA------NGGDPLQAQHDLL--------AEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGA--AWNVDGG 251 (255)
T ss_dssp -HHH------HTCCHHHHHHHHH--------TTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred -ccc------cccchHHHHHHHH--------hccCCCCCCcCHHHHHHHHHHHhCCccCCCCCC--EEEECCC
Confidence 000 0000000001110 1112334689999999999999875443 355 9999875
No 144
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.92 E-value=1.7e-24 Score=202.81 Aligned_cols=214 Identities=20% Similarity=0.162 Sum_probs=162.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+|+||.+++++|+++|++|++++|... ...+.++.+|++|++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-----------------------------~~~~~~~~~D~~~~~ 52 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-----------------------------GEDLIYVEGDVTREE 52 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-----------------------------SSSSEEEECCTTCHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-----------------------------ccceEEEeCCCCCHH
Confidence 689999999999999999999999999999987532 024578999999999
Q ss_pred HHHHHhhhc----CCCEEEEcccccCcccccc-ccc----ccchhhhhhHHHHHHHHHHHHHcC---------CcceEEE
Q 011706 166 FLSESFKSF----EPDAVVHFGEQRSAPYSMI-DRS----RAVFTQHNNVIGTLNVLFAMKEFR---------QECHLVK 227 (479)
Q Consensus 166 ~~~~~~~~~----~~D~Vih~A~~~~~~~~~~-~~~----~~~~~~~~Nv~g~~~ll~~a~~~g---------~~~~~V~ 227 (479)
+++++++.. ++|+||||||......... +.+ ++...+++|+.|+.++++++.+.. ...+||+
T Consensus 53 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~ 132 (242)
T 1uay_A 53 DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVN 132 (242)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEE
T ss_pred HHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEE
Confidence 999888744 7899999999754332211 222 567889999999999999987541 1128999
Q ss_pred eeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCc
Q 011706 228 LGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDE 304 (479)
Q Consensus 228 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~ 304 (479)
+||...+... .+...|+.+|++.+.+++.++.++ |++++++|||.|+++....
T Consensus 133 ~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 188 (242)
T 1uay_A 133 TASVAAFEGQ------------------------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG 188 (242)
T ss_dssp ECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT
T ss_pred eCChhhccCC------------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc
Confidence 9998766422 346899999999999999998875 8999999999999874211
Q ss_pred hhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
....+...+..+.++ ...+++++|+|++++.++......|+ +|++.++
T Consensus 189 -------------------~~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~~~~~~G~--~~~v~gG 236 (242)
T 1uay_A 189 -------------------LPEKAKASLAAQVPF--------PPRLGRPEEYAALVLHILENPMLNGE--VVRLDGA 236 (242)
T ss_dssp -------------------SCHHHHHHHHTTCCS--------SCSCCCHHHHHHHHHHHHHCTTCCSC--EEEESTT
T ss_pred -------------------cchhHHHHHHhhCCC--------cccCCCHHHHHHHHHHHhcCCCCCCc--EEEEcCC
Confidence 011222333333221 03578999999999999987544566 9999875
No 145
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.92 E-value=1.1e-24 Score=208.54 Aligned_cols=238 Identities=12% Similarity=0.083 Sum_probs=167.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++|
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~d 84 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV----------------SAAVDGLRA-AGHDVDGSSCDVTS 84 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHT-TTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEECCCCC
Confidence 4689999999999999999999999999999999864321 111222222 24578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH------cCCcceEEEeecc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE------FRQECHLVKLGTM 231 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~------~g~~~~~V~~SS~ 231 (479)
.++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g-~iV~isS~ 163 (279)
T 3sju_A 85 TDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWG-RIVNIAST 163 (279)
T ss_dssp HHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCE-EEEEECCG
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCc-EEEEECCh
Confidence 99988887654 7999999999865432 3345667888999999999999998755 4455 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +......|+.||++.+.+++.++.+ .|+++++++||.|.++....
T Consensus 164 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---- 215 (279)
T 3sju_A 164 GGKQ------------------------GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER---- 215 (279)
T ss_dssp GGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH----
T ss_pred hhcc------------------------CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH----
Confidence 5542 2234688999999999999999988 48999999999998763210
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
+.... ...+..........+... .....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 216 --~~~~~--~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~a~~itG~--~i~vdGG~ 276 (279)
T 3sju_A 216 --VREGY--ARHWGVTEQEVHERFNAK---------IPLGRYSTPEEVAGLVGYLVTDAAASITAQ--ALNVCGGL 276 (279)
T ss_dssp --HHHSC--CSSSCCCHHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHTSSGGGGCCSC--EEEESTTC
T ss_pred --HHhhh--hhcccCChHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCccccCcCCc--EEEECCCc
Confidence 00000 000000011222222222 2334678999999999999876543 455 99998753
No 146
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.92 E-value=6.7e-24 Score=202.61 Aligned_cols=233 Identities=13% Similarity=0.131 Sum_probs=164.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~ 80 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL----------------DECLEIWRE-KGLNVEGSVCDLL 80 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCceEEEECCCC
Confidence 46789999999999999999999999999999999864321 111122211 1357889999999
Q ss_pred ChHHHHHHhhh------cCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecc
Q 011706 163 DFEFLSESFKS------FEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~------~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~ 231 (479)
|+++++++++. .++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 81 ~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~isS~ 159 (273)
T 1ae1_A 81 SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG-NVIFLSSI 159 (273)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcCH
Confidence 99998888753 27999999999754322 223556778899999999999999884 34555 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+.. ..+...|+.||++.+.+++.++.++ |+++++++||.|+++......
T Consensus 160 ~~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-- 213 (273)
T 1ae1_A 160 AGFSA------------------------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI-- 213 (273)
T ss_dssp GGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------
T ss_pred hhcCC------------------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh--
Confidence 76632 2336899999999999999999885 899999999999998532100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. .. .. ...+...+....+ ...+.+++|+|++++.++..... .|+ ++++.++
T Consensus 214 ----~----~~--~~-~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~l~s~~~~~~tG~--~i~vdGG 266 (273)
T 1ae1_A 214 ----K----KN--PH-QKEEIDNFIVKTP---------MGRAGKPQEVSALIAFLCFPAASYITGQ--IIWADGG 266 (273)
T ss_dssp ----------------CHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ----h----cc--cC-cHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCcCCC--EEEECCC
Confidence 0 00 00 0011122221111 23478999999999999875433 455 9999875
No 147
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.92 E-value=1.9e-24 Score=204.97 Aligned_cols=240 Identities=12% Similarity=0.038 Sum_probs=162.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... +.+..+.+....+.++.++.+|++|
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~~~~~~~D~~~ 66 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAE---------------IEKVRAGLAAQHGVKVLYDGADLSK 66 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHH---------------HHHHHHHHHHHHTSCEEEECCCTTS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchH---------------HHHHHHHHHhccCCcEEEEECCCCC
Confidence 4578999999999999999999999999999998754310 1111111111113468889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+.+ +||++||...
T Consensus 67 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~ 145 (260)
T 1x1t_A 67 GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG-RIINIASAHG 145 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEECcHHh
Confidence 99998887643 6999999999754322 2335567788999999999999988843 4555 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++...... ..
T Consensus 146 ~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~ 199 (260)
T 1x1t_A 146 LV------------------------ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI--SA 199 (260)
T ss_dssp TS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------
T ss_pred Cc------------------------CCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhh--hh
Confidence 42 12336899999999999999999885 799999999999988532100 00
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
... ..+. -.......+. ........+.+++|+|++++.++..... .|+ ++++.++
T Consensus 200 ~~~---~~~~---~~~~~~~~~~--------~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~--~~~vdgG 256 (260)
T 1x1t_A 200 LAE---KNGV---DQETAARELL--------SEKQPSLQFVTPEQLGGTAVFLASDAAAQITGT--TVSVDGG 256 (260)
T ss_dssp ---------------------CH--------HHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred hcc---ccCC---chHHHHHHHh--------hccCCCCCCcCHHHHHHHHHHHhChhhcCCCCC--EEEECCC
Confidence 000 0000 0000000000 0001224678999999999999975432 355 9999875
No 148
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.92 E-value=3.1e-24 Score=203.94 Aligned_cols=238 Identities=16% Similarity=0.173 Sum_probs=169.9
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dv~ 70 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL----------------EDVAKQVTD-TGRRALSVGTDIT 70 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEEcCCC
Confidence 45789999999999999999999999999999999864321 111222221 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
|+++++++++.. ++|+||||||.... +....+.+++.+++++|+.|+.++++++.. .+ + +||++||.
T Consensus 71 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g-~iv~isS~ 148 (264)
T 3ucx_A 71 DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-G-AVVNVNSM 148 (264)
T ss_dssp CHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-C-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C-EEEEECcc
Confidence 999998888754 79999999987532 223445667888999999999999988743 23 4 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +......|+.||++.+.+++.++.+ +|+++++++||.|+++.......
T Consensus 149 ~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~- 203 (264)
T 3ucx_A 149 VVRH------------------------SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFE- 203 (264)
T ss_dssp GGGC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHH-
T ss_pred hhcc------------------------CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHH-
Confidence 6542 2234679999999999999999988 58999999999998874221000
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
..... +......+...... ......+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 204 -~~~~~------~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~--~i~vdGG~ 261 (264)
T 3ucx_A 204 -HQAGK------YGTSVEDIYNAAAA---------GSDLKRLPTEDEVASAILFMASDLASGITGQ--ALDVNCGE 261 (264)
T ss_dssp -HHHHH------TTCCHHHHHHHHHT---------TSSSSSCCBHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred -hhhhh------cCCCHHHHHHHHhc---------cCCcccCCCHHHHHHHHHHHcCccccCCCCC--EEEECCCc
Confidence 00000 00001122222222 23345688999999999999976443 455 99998854
No 149
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.92 E-value=4.5e-24 Score=200.97 Aligned_cols=225 Identities=16% Similarity=0.090 Sum_probs=159.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc-ccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI-RRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++|.. .. +.+ .+.. .+.++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~---~~~~-~~~~~~~~~~Dv~ 64 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE----------------AEA---AIRN-LGRRVLTVKCDVS 64 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH----------------HHH---HHHH-TTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhH----------------HHH---HHHh-cCCcEEEEEeecC
Confidence 5689999999999999999999999999999999864 21 011 1111 1357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++ ++.+.+ +||++||..
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~ 143 (249)
T 2ew8_A 65 QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG-RIINLTSTT 143 (249)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe-EEEEEcchh
Confidence 999988887542 7999999999764322 23355677889999999998888874 455555 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+.. ..+...|+.||++.+.+++.++.++ |+++++++||.|.++.....
T Consensus 144 ~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---- 195 (249)
T 2ew8_A 144 YWLK------------------------IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS---- 195 (249)
T ss_dssp GGSC------------------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------
T ss_pred hccC------------------------CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhc----
Confidence 6532 2336899999999999999999885 89999999999988742200
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..... ...... .. .....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 196 --------------~~~~~-~~~~~~-~~------~~~~~~~~p~dva~~~~~l~s~~~~~~tG~--~~~vdGG 245 (249)
T 2ew8_A 196 --------------ALSAM-FDVLPN-ML------QAIPRLQVPLDLTGAAAFLASDDASFITGQ--TLAVDGG 245 (249)
T ss_dssp -------------------------C-TT------SSSCSCCCTHHHHHHHHHHTSGGGTTCCSC--EEEESSS
T ss_pred --------------cccch-hhHHHH-hh------CccCCCCCHHHHHHHHHHHcCcccCCCCCc--EEEECCC
Confidence 00000 000000 00 1223578999999999999875432 455 8998875
No 150
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.92 E-value=3.1e-24 Score=203.60 Aligned_cols=228 Identities=16% Similarity=0.147 Sum_probs=165.6
Q ss_pred CCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGGD--GYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGat--G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+++|+||||||+ |+||.+++++|+++|++|++++|.... .+..+.+.... .++.++.+|+
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------------~~~~~~l~~~~-~~~~~~~~D~ 67 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-----------------RPEAEKLAEAL-GGALLFRADV 67 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-----------------HHHHHHHHHHT-TCCEEEECCT
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-----------------HHHHHHHHHhc-CCcEEEECCC
Confidence 568999999999 999999999999999999999875420 01112221111 2378899999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCc-----ccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeec
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS 230 (479)
+|+++++++++.. ++|+||||||.... +....+.+++.+++++|+.|+.++++++...- .+.+||++||
T Consensus 68 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 147 (261)
T 2wyu_A 68 TQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY 147 (261)
T ss_dssp TCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 9999998887753 68999999997542 22234556778899999999999999997651 1139999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+. +..+...|+.||++.+.+++.++.++ |+++++++||.|+++.....
T Consensus 148 ~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-- 201 (261)
T 2wyu_A 148 YASEK------------------------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-- 201 (261)
T ss_dssp GGGTS------------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC--
T ss_pred ccccC------------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc--
Confidence 65442 12236789999999999999999886 89999999999999853210
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.....+...+....+ ...+.+++|+|++++.++..... .|+ +|++.++
T Consensus 202 ---------------~~~~~~~~~~~~~~p---------~~~~~~~~dva~~v~~l~s~~~~~~tG~--~~~vdgG 251 (261)
T 2wyu_A 202 ---------------PGFTKMYDRVAQTAP---------LRRNITQEEVGNLGLFLLSPLASGITGE--VVYVDAG 251 (261)
T ss_dssp ---------------TTHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------cccHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcChhhcCCCCC--EEEECCC
Confidence 001222222222222 12467899999999999875433 355 9999885
No 151
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.92 E-value=7.9e-24 Score=204.06 Aligned_cols=233 Identities=13% Similarity=0.055 Sum_probs=168.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... +......+.++.++.+|++
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~--------------------~~~~~~~~~~~~~~~~Dl~ 72 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG--------------------EAAARTMAGQVEVRELDLQ 72 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH--------------------HHHHTTSSSEEEEEECCTT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH--------------------HHHHHHhcCCeeEEEcCCC
Confidence 46789999999999999999999999999999999865421 1111111457999999999
Q ss_pred ChHHHHHHhhhc-CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCC--
Q 011706 163 DFEFLSESFKSF-EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-- 239 (479)
Q Consensus 163 d~~~~~~~~~~~-~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~-- 239 (479)
|.++++++++.. ++|+||||||..... ...+.+++..++++|+.|+.++++++.....+ +||++||...+.....
T Consensus 73 d~~~v~~~~~~~~~iD~lv~nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-riv~isS~~~~~~~~~~~ 150 (291)
T 3rd5_A 73 DLSSVRRFADGVSGADVLINNAGIMAVP-YALTVDGFESQIGTNHLGHFALTNLLLPRLTD-RVVTVSSMAHWPGRINLE 150 (291)
T ss_dssp CHHHHHHHHHTCCCEEEEEECCCCCSCC-CCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-EEEEECCGGGTTCCCCSS
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCCCc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-heeEeechhhccCCCCcc
Confidence 999999999865 689999999986533 33456678889999999999999999988766 9999999766543211
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---C--CceEEeecCeeecCCCCchhhhHhhhcc
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVRTDETAMHEELCNR 314 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--l~~~ivRp~~v~Gp~~~~~~~~~~~~~~ 314 (479)
...++ ..+..+...|+.||++.+.+++.+++++ | +++++++||.|..+.....
T Consensus 151 ~~~~~-------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~--------- 208 (291)
T 3rd5_A 151 DLNWR-------------SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS--------- 208 (291)
T ss_dssp CTTCS-------------SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------
T ss_pred ccccc-------------ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc---------
Confidence 11110 0133456889999999999999998875 5 9999999999977753210
Q ss_pred cCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC
Q 011706 315 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT 380 (479)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~ 380 (479)
...+ ....... ...+-..+++|+|++++.++..+...|+ .+++.+
T Consensus 209 ----------~~~~-~~~~~~~--------~~~~~~~~~~~~A~~~~~l~~~~~~~G~--~~~vdg 253 (291)
T 3rd5_A 209 ----------GRKL-GDALMSA--------ATRVVATDADFGARQTLYAASQDLPGDS--FVGPRF 253 (291)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHHSCCCTTC--EEEETT
T ss_pred ----------chHH-HHHHHHH--------HHHHHhCCHHHHHHHHHHHHcCCCCCCc--eeCCcc
Confidence 0001 0000000 0112234699999999999998766666 888765
No 152
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.92 E-value=1.7e-24 Score=204.40 Aligned_cols=228 Identities=12% Similarity=0.019 Sum_probs=163.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||++++++|+++|++|++++|..... .+..+.+ +.++.++.+|++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~D~~ 62 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG----------------QQLAAEL----GERSMFVRHDVS 62 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH----------------HHHHHHH----CTTEEEECCCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHc----CCceEEEEccCC
Confidence 35689999999999999999999999999999998754311 1111111 357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++.+++. +.+ + +||++||..
T Consensus 63 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g-~iv~isS~~ 140 (253)
T 1hxh_A 63 SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-G-SIINMASVS 140 (253)
T ss_dssp CHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-E-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-C-EEEEEcchh
Confidence 999988887653 5899999999764322 233556778899999999888877653 344 4 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-----CCceEEeecCeeecCCCCchhh
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-----GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
.+. +..+...|+.||++.+.+++.++.++ |++++++|||.|+++....
T Consensus 141 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~--- 193 (253)
T 1hxh_A 141 SWL------------------------PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA--- 193 (253)
T ss_dssp GTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH---
T ss_pred hcC------------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhh---
Confidence 553 22346789999999999999998874 8999999999999874210
Q ss_pred hHhhhcccCCCCcccchHHHHHHH-HhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQ-AAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
..+ .. .... +.... .......+.+++|+|++++.++..+.. .|+ ++++.++.
T Consensus 194 ---~~~----~~--------~~~~~~~~~~------~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~--~~~vdgG~ 248 (253)
T 1hxh_A 194 ---SLP----KG--------VSKEMVLHDP------KLNRAGRAYMPERIAQLVLFLASDESSVMSGS--ELHADNSI 248 (253)
T ss_dssp ---HSC----TT--------CCHHHHBCBT------TTBTTCCEECHHHHHHHHHHHHSGGGTTCCSC--EEEESSSC
T ss_pred ---ccc----hh--------hhHHHHhhhh------ccCccCCCCCHHHHHHHHHHHcCccccCCCCc--EEEECCCc
Confidence 000 00 0001 11100 011223578999999999999976543 355 99998753
No 153
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.92 E-value=5.8e-25 Score=209.01 Aligned_cols=225 Identities=10% Similarity=0.038 Sum_probs=162.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|.... ++......+.++.++.+|++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~--------------------~~~~~~~~~~~~~~~~~Dv~ 83 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDK--------------------LKEIAADLGKDVFVFSANLS 83 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHHHCSSEEEEECCTT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--------------------HHHHHHHhCCceEEEEeecC
Confidence 4678999999999999999999999999999999875431 11111112457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++. +.+.+ +||++||..
T Consensus 84 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~Iv~isS~~ 162 (266)
T 3grp_A 84 DRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYG-RIINITSIV 162 (266)
T ss_dssp SHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCC-
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-EEEEECCHH
Confidence 999998888743 7999999999765332 233556778899999999888777663 34555 999999964
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++....
T Consensus 163 ~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~----- 213 (266)
T 3grp_A 163 GVV------------------------GNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK----- 213 (266)
T ss_dssp ------------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-----
T ss_pred HcC------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-----
Confidence 431 12236889999999999999999885 8999999999998763210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
........+.... ....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 214 --------------~~~~~~~~~~~~~---------p~~r~~~~edvA~~v~~L~s~~~~~itG~--~i~vdGG~ 263 (266)
T 3grp_A 214 --------------LNEKQKEAIMAMI---------PMKRMGIGEEIAFATVYLASDEAAYLTGQ--TLHINGGM 263 (266)
T ss_dssp --------------CCHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTC
T ss_pred --------------cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCccCC--EEEECCCe
Confidence 0112222333322 234678899999999999976544 455 99998753
No 154
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.92 E-value=1.6e-24 Score=204.61 Aligned_cols=227 Identities=18% Similarity=0.087 Sum_probs=143.4
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~ 67 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA----------------EAVAKQIVA-DGGTAISVAVDV 67 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCEEEEEECCT
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH----------------HHHHHHHHh-cCCcEEEEEccC
Confidence 456789999999999999999999999999999999864421 111112211 245788999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCc----ccccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEe
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSA----PYSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKL 228 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~ 228 (479)
+|+++++++++.. ++|+||||||.... .....+++++..++++|+.|+.++++++ ++.+.+ +||++
T Consensus 68 ~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~i 146 (253)
T 3qiv_A 68 SDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG-AIVNQ 146 (253)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-EEEEE
Confidence 9999998888754 79999999997421 1123355667889999999977777665 444555 99999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...|. +...|+.||++.+.+++.++.++ |+++++++||.|+++.....
T Consensus 147 sS~~~~~---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 199 (253)
T 3qiv_A 147 SSTAAWL---------------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT 199 (253)
T ss_dssp CC--------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------
T ss_pred CCccccC---------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc
Confidence 9976552 14579999999999999999986 79999999999998854311
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
....+...+..+ .....+.+++|++++++.++..... .|+ +|++.++.
T Consensus 200 ------------------~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~~tG~--~~~vdgG~ 249 (253)
T 3qiv_A 200 ------------------TPKEMVDDIVKG---------LPLSRMGTPDDLVGMCLFLLSDEASWITGQ--IFNVDGGQ 249 (253)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHSGGGTTCCSC--EEEC----
T ss_pred ------------------CcHHHHHHHhcc---------CCCCCCCCHHHHHHHHHHHcCccccCCCCC--EEEECCCe
Confidence 001122222222 2233566789999999999976443 455 99998753
No 155
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.92 E-value=7.4e-24 Score=200.89 Aligned_cols=228 Identities=13% Similarity=0.043 Sum_probs=164.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec-ccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS-LIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++| ..... .+..+.+.. .+.++.++.+|++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~l~~-~~~~~~~~~~D~~ 67 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA----------------NSVLEEIKK-VGGEAIAVKGDVT 67 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------------HHHHHHHHH-TTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHH----------------HHHHHHHHh-cCCceEEEECCCC
Confidence 46789999999999999999999999999999988 32211 111111111 1357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----C-CcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R-QECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g-~~~~~V~~SS~ 231 (479)
|.+++.++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++... + .+ +||++||.
T Consensus 68 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~-~iv~isS~ 146 (261)
T 1gee_A 68 VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKG-TVINMSSV 146 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCC-EEEEeCCH
Confidence 999988887643 7999999999764322 22345567788999999999998887543 3 34 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.+|++.+.+++.++.++ |++++++|||.|+++......
T Consensus 147 ~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-- 200 (261)
T 1gee_A 147 HEKI------------------------PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-- 200 (261)
T ss_dssp GGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH--
T ss_pred HhcC------------------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc--
Confidence 5442 22347899999999999999998875 899999999999998532100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+...+.... ....+++++|+|++++.++..... .|+ ++++.++
T Consensus 201 ---------------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg 249 (261)
T 1gee_A 201 ---------------ADPEQRADVESMI---------PMGYIGEPEEIAAVAAWLASSEASYVTGI--TLFADGG 249 (261)
T ss_dssp ---------------HSHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------cChhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCCCCc--EEEEcCC
Confidence 0011222222211 123578999999999999875432 455 9999875
No 156
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.92 E-value=3.6e-24 Score=204.40 Aligned_cols=229 Identities=15% Similarity=0.112 Sum_probs=159.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|+||||||+|+||.+++++|+++|++|++++...... ..+..+.+. ..+.++.++.+|++|.
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~Dl~~~ 88 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREA---------------ADAVVAAIT-ESGGEAVAIPGDVGNA 88 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHH-HTTCEEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhH---------------HHHHHHHHH-hcCCcEEEEEcCCCCH
Confidence 578999999999999999999999999998875433211 111111121 1245789999999999
Q ss_pred HHHHHHhhhc-----CCCEEEEcccccCcc--cccccccccchhhhhhHHHHHHHHHHHHHc------CCcceEEEeecc
Q 011706 165 EFLSESFKSF-----EPDAVVHFGEQRSAP--YSMIDRSRAVFTQHNNVIGTLNVLFAMKEF------RQECHLVKLGTM 231 (479)
Q Consensus 165 ~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~------g~~~~~V~~SS~ 231 (479)
++++++++.. ++|+||||||..... ....+.+++..++++|+.|+.++++++... +...+||++||.
T Consensus 89 ~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~ 168 (272)
T 4e3z_A 89 ADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSM 168 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCT
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcch
Confidence 9998888754 799999999986532 223355677889999999999999988654 122389999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+... ......|+.||++.+.+++.++.++ |+++++++||.|.++.....
T Consensus 169 ~~~~~~-----------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--- 222 (272)
T 4e3z_A 169 AAILGS-----------------------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--- 222 (272)
T ss_dssp HHHHCC-----------------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------
T ss_pred HhccCC-----------------------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc---
Confidence 554211 1135679999999999999999886 89999999999998853210
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.......... .......+.+++|+|++++.++..... .|+ +|++.++
T Consensus 223 ---------------~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~--~i~vdgG 271 (272)
T 4e3z_A 223 ---------------GLPDRAREMA---------PSVPMQRAGMPEEVADAILYLLSPSASYVTGS--ILNVSGG 271 (272)
T ss_dssp -----------------------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------CChHHHHHHh---------hcCCcCCCcCHHHHHHHHHHHhCCccccccCC--EEeecCC
Confidence 0111111111 112334567899999999999975443 355 9999875
No 157
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.92 E-value=1.8e-24 Score=205.55 Aligned_cols=223 Identities=15% Similarity=0.100 Sum_probs=163.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .....+.+|++
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------------------------~~~~~~~~Dv~ 76 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI----------------------------AADLHLPGDLR 76 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS----------------------------CCSEECCCCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------------------HhhhccCcCCC
Confidence 45789999999999999999999999999999988753311 11234479999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
|.+++.++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++ ++.+.+ +||++||..
T Consensus 77 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~ 155 (266)
T 3uxy_A 77 EAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGG-AIVNVASCW 155 (266)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCSB
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECCHH
Confidence 998888777643 7999999999865433 23356678889999999999999998 455555 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++......
T Consensus 156 ~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--- 208 (266)
T 3uxy_A 156 GLR------------------------PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF--- 208 (266)
T ss_dssp TTB------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH---
T ss_pred hCC------------------------CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh---
Confidence 442 22346899999999999999999886 899999999999887421100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.. . ..........+... .....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 209 ---~~---~---~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~itG~--~i~vdGG 262 (266)
T 3uxy_A 209 ---AK---R---GFDPDRAVAELGRT---------VPLGRIAEPEDIADVVLFLASDAARYLCGS--LVEVNGG 262 (266)
T ss_dssp ---HH---T---TCCHHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---hc---c---cccchHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhcCCcCC--EEEECcC
Confidence 00 0 00011112222222 2345678999999999999986544 355 9999875
No 158
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.92 E-value=7e-24 Score=201.76 Aligned_cols=232 Identities=14% Similarity=0.100 Sum_probs=165.7
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|+
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dl 80 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEA----------------SEAAQKLTEKYGVETMAFRCDV 80 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHHCCCEEEEECCT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHhcCCeEEEEEcCC
Confidence 356789999999999999999999999999999998864321 1111111011135688899999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
+|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g-~iv~isS~ 159 (267)
T 1vl8_A 81 SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP-SIINIGSL 159 (267)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC-EEEEECCG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc-EEEEECCc
Confidence 9999998887643 6999999999765332 2335567788999999999999988743 3445 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
.+.. .+..+...|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 160 ~~~~-----------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-- 214 (267)
T 1vl8_A 160 TVEE-----------------------VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-- 214 (267)
T ss_dssp GGTC-----------------------CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH--
T ss_pred chhc-----------------------cCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccc--
Confidence 5210 122336789999999999999999884 899999999999877421100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. -...........+ ...+++.+|+|++++.++..... .|+ ++++.++
T Consensus 215 -------------~--~~~~~~~~~~~~p---------~~~~~~p~dvA~~v~~l~s~~~~~itG~--~i~vdGG 263 (267)
T 1vl8_A 215 -------------S--DPEKLDYMLKRIP---------LGRTGVPEDLKGVAVFLASEEAKYVTGQ--IIFVDGG 263 (267)
T ss_dssp -------------T--CHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -------------c--ChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHcCccccCCcCC--eEEECCC
Confidence 0 0111222222211 23478999999999999876433 455 8888775
No 159
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.92 E-value=1.3e-24 Score=206.69 Aligned_cols=231 Identities=14% Similarity=0.061 Sum_probs=169.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dv~ 80 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSEL----------------DAARRALGEQFGTDVHTVAIDLA 80 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHHCCCEEEEECCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHhcCCcEEEEEecCC
Confidence 46789999999999999999999999999999999864321 11222222223467999999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++... +...+||++||..
T Consensus 81 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~ 160 (266)
T 4egf_A 81 EPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAA 160 (266)
T ss_dssp STTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchh
Confidence 999988887654 7999999999865433 33456678889999999999999888542 3223999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 161 ~~~------------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--- 213 (266)
T 4egf_A 161 ALA------------------------PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW--- 213 (266)
T ss_dssp GTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHT---
T ss_pred hcc------------------------CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhc---
Confidence 552 22346899999999999999999884 899999999999876321000
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. ............ ....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 214 ------------~--~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~~~itG~--~i~vdGG 262 (266)
T 4egf_A 214 ------------G--DEAKSAPMIARI---------PLGRFAVPHEVSDAVVWLASDAASMINGV--DIPVDGG 262 (266)
T ss_dssp ------------C--SHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ------------c--ChHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhcCccCc--EEEECCC
Confidence 0 011122222222 234578899999999999976443 455 9999875
No 160
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.92 E-value=4.5e-24 Score=204.48 Aligned_cols=228 Identities=13% Similarity=0.080 Sum_probs=157.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++|
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~Dv~d 90 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEG---------------VAPVIAELSG-LGARVIFLRADLAD 90 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHH---------------HHHHHHHHHH-TTCCEEEEECCTTS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHH---------------HHHHHHHHHh-cCCcEEEEEecCCC
Confidence 5689999999999999999999999999999998643211 1111122221 24578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccC--c-ccccccccccchhhhhhHHHHHHHHHHHHHc----C---CcceEEEe
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRS--A-PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R---QECHLVKL 228 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~--~-~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g---~~~~~V~~ 228 (479)
+++++++++.. ++|+||||||... . +....+++++..++++|+.|+.++++++... + .+ +||++
T Consensus 91 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g-~Iv~i 169 (280)
T 4da9_A 91 LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASR-SIINI 169 (280)
T ss_dssp GGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCE-EEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCC-EEEEE
Confidence 99988888754 7999999999732 1 2233356678889999999999999887543 2 33 89999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...+. +......|+.||++.+.+++.++.+ .|+++++++||.|..+.....
T Consensus 170 sS~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 225 (280)
T 4da9_A 170 TSVSAVM------------------------TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV 225 (280)
T ss_dssp CCC-------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred cchhhcc------------------------CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc
Confidence 9965442 2233678999999999999999988 479999999999988753210
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.......... .......+.+++|+|++++.++..... .|+ ++++.++
T Consensus 226 -------------------~~~~~~~~~~--------~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~--~i~vdGG 274 (280)
T 4da9_A 226 -------------------SGKYDGLIES--------GLVPMRRWGEPEDIGNIVAGLAGGQFGFATGS--VIQADGG 274 (280)
T ss_dssp -------------------------------------------CCBCHHHHHHHHHHHHTSTTGGGTTC--EEEESTT
T ss_pred -------------------chhHHHHHhh--------cCCCcCCcCCHHHHHHHHHHHhCccccCCCCC--EEEECCC
Confidence 0011111111 012335678999999999999987653 455 9999875
No 161
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.92 E-value=1.8e-24 Score=205.44 Aligned_cols=237 Identities=16% Similarity=0.182 Sum_probs=168.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dl~ 74 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA----------------VEVTEKVGKEFGVKTKAYQCDVS 74 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH----------------HHHHHHHHHHHTCCEEEEECCTT
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh----------------HHHHHHHHHhcCCeeEEEEeeCC
Confidence 45789999999999999999999999999999999853311 01111121112357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++... +...+||++||..
T Consensus 75 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 154 (265)
T 1h5q_A 75 NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMS 154 (265)
T ss_dssp CHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCch
Confidence 999998887642 4899999999765332 22355567788999999999999988643 3223999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+...... . .+..+...|+.+|++.+.+++.++.++ |++++++|||.|+++.....
T Consensus 155 ~~~~~~~~--~---------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---- 213 (265)
T 1h5q_A 155 SQIINQSS--L---------------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---- 213 (265)
T ss_dssp GTSCCEEE--T---------------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----
T ss_pred hhcccccc--c---------------cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc----
Confidence 54321100 0 122346899999999999999999875 89999999999998853210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC--CCCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA--QPGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~g~~~~~ni~~~~ 382 (479)
...+........+ ...+++++|+|++++.++..+. ..|+ +|++.++.
T Consensus 214 ---------------~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gG~ 262 (265)
T 1h5q_A 214 ---------------DKKIRDHQASNIP---------LNRFAQPEEMTGQAILLLSDHATYMTGG--EYFIDGGQ 262 (265)
T ss_dssp ---------------CHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGGGTTCCSC--EEEECTTG
T ss_pred ---------------chhHHHHHHhcCc---------ccCCCCHHHHHHHHHhhccCchhcCcCc--EEEecCCE
Confidence 0112222222211 2357899999999999997643 2455 99998753
No 162
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.92 E-value=3.5e-24 Score=203.56 Aligned_cols=225 Identities=18% Similarity=0.152 Sum_probs=164.9
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+ +.++.++.+|++
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~D~~ 68 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG----------------EAQAKKL----GNNCVFAPADVT 68 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH----------------HHHHHHH----CTTEEEEECCTT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH----------------HHHHHHh----CCceEEEEcCCC
Confidence 45789999999999999999999999999999999864321 1111111 357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccccc-------ccccccchhhhhhHHHHHHHHHHHHHc----------C
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSM-------IDRSRAVFTQHNNVIGTLNVLFAMKEF----------R 220 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~-------~~~~~~~~~~~~Nv~g~~~ll~~a~~~----------g 220 (479)
|+++++++++.. ++|+||||||........ .+.+++...+++|+.|+.++++++... +
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~ 148 (265)
T 2o23_A 69 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ 148 (265)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC
Confidence 999998888743 799999999976433211 244567788999999999999998764 4
Q ss_pred CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCee
Q 011706 221 QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVV 297 (479)
Q Consensus 221 ~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v 297 (479)
.+ +||++||...+.. ..+...|+.+|++.+.+++.++.++ |+++++++||.|
T Consensus 149 ~~-~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 203 (265)
T 2o23_A 149 RG-VIINTASVAAFEG------------------------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLF 203 (265)
T ss_dssp CE-EEEEECCTHHHHC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred Cc-EEEEeCChhhcCC------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccc
Confidence 44 9999999766532 1236899999999999999998874 899999999999
Q ss_pred ecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEE
Q 011706 298 YGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFN 377 (479)
Q Consensus 298 ~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~n 377 (479)
.++..... ...+........+. ...+++++|+|++++.++......|+ +++
T Consensus 204 ~t~~~~~~-------------------~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~~~~~~G~--~i~ 254 (265)
T 2o23_A 204 GTPLLTSL-------------------PEKVCNFLASQVPF--------PSRLGDPAEYAHLVQAIIENPFLNGE--VIR 254 (265)
T ss_dssp CCC-----------------------------CHHHHTCSS--------SCSCBCHHHHHHHHHHHHHCTTCCSC--EEE
T ss_pred cCcccccc-------------------CHHHHHHHHHcCCC--------cCCCCCHHHHHHHHHHHhhcCccCce--EEE
Confidence 88743210 00000111111110 03478999999999999987655666 899
Q ss_pred eCCC
Q 011706 378 QFTE 381 (479)
Q Consensus 378 i~~~ 381 (479)
+.++
T Consensus 255 vdgG 258 (265)
T 2o23_A 255 LDGA 258 (265)
T ss_dssp ESTT
T ss_pred ECCC
Confidence 8875
No 163
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.92 E-value=4.1e-24 Score=203.88 Aligned_cols=229 Identities=14% Similarity=0.045 Sum_probs=166.2
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+.+++|+||||||+|+||.+++++|+++|++|++++|...... +.........+.++.++.+|+
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~~~~~~~~~~~~~D~ 88 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVA----------------DALKNELEEKGYKAAVIKFDA 88 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------------HHHHHHHHHTTCCEEEEECCT
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH----------------HHHHHHHHhcCCceEEEECCC
Confidence 3567899999999999999999999999999999998543211 111111112245789999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCcccc-cccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPYS-MIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
+|.+++.++++.. ++|+||||||....... ..+++++..++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 89 ~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~ 167 (271)
T 4iin_A 89 ASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFG-SVVNVASI 167 (271)
T ss_dssp TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCH
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC-EEEEEech
Confidence 9999988888753 79999999998654322 335567788999999999999887744 3445 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.+|++.+.+++.++.+ .|+++++++||.|..+....
T Consensus 168 ~~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---- 219 (271)
T 4iin_A 168 IGER------------------------GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN---- 219 (271)
T ss_dssp HHHH------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------
T ss_pred hhcC------------------------CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh----
Confidence 5442 2234689999999999999999988 48999999999998774221
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
...... ..+........+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 220 ---------------~~~~~~---------~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~--~i~vdGG 268 (271)
T 4iin_A 220 ---------------LKDELK---------ADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGE--TLKVNGG 268 (271)
T ss_dssp --------------------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------hcHHHH---------HHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCC--EEEeCCC
Confidence 000110 1111222345688999999999999976543 455 9999875
No 164
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.92 E-value=6.5e-24 Score=201.25 Aligned_cols=239 Identities=13% Similarity=0.081 Sum_probs=163.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl 161 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+... .+.++.++.+|+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~D~ 67 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKL----------------EAAASRIASLVSGAQVDIVAGDI 67 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHSTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHhcCCCCeEEEEEccC
Confidence 35689999999999999999999999999999999864321 1111111111 123688999999
Q ss_pred CChHHHHHHhhh----cCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 162 CDFEFLSESFKS----FEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 162 ~d~~~~~~~~~~----~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
+|+++++++++. +++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||..
T Consensus 68 ~~~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~ 146 (260)
T 2z1n_A 68 REPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWG-RMVYIGSVT 146 (260)
T ss_dssp TCHHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECchh
Confidence 999998888763 25999999999754322 233556788899999999988877664 44555 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+.. ..+...|+.+|++.+.+++.++.++ |+++++++||.|+++.........
T Consensus 147 ~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~ 202 (260)
T 2z1n_A 147 LLRP------------------------WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEER 202 (260)
T ss_dssp GTSC------------------------CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------
T ss_pred hcCC------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhh
Confidence 6532 2336799999999999999999885 899999999999988643100000
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. ....+.... ....+........+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 203 ------------~-~~~~~~~~~----~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~--~i~vdGG 257 (260)
T 2z1n_A 203 ------------A-RRSGITVEE----ALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGA--VIPVDGG 257 (260)
T ss_dssp ----------------------------------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred ------------h-cccCCcHHH----HHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCC--EEEeCCC
Confidence 0 000000000 000011111223578999999999999876433 455 8998875
No 165
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.92 E-value=2.5e-24 Score=206.00 Aligned_cols=231 Identities=14% Similarity=0.084 Sum_probs=169.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~Dv~ 87 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRV----------------LTAARKLAGATGRRCLPLSMDVR 87 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHH----------------HHHHHHHHHHHSSCEEEEECCTT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHhcCCcEEEEEcCCC
Confidence 46789999999999999999999999999999999864321 11222222223467899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~ 166 (277)
T 4fc7_A 88 APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG-VIVNITATL 166 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE-EEEEECCSH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEECchh
Confidence 999988887754 7999999999754332 3345667888999999999999998843 3344 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.++ |+++++++||.|.++.....
T Consensus 167 ~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---- 218 (277)
T 4fc7_A 167 GNR------------------------GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRR---- 218 (277)
T ss_dssp HHH------------------------TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHH----
T ss_pred hCC------------------------CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhh----
Confidence 442 12336889999999999999999885 89999999999988731100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
+ .. ............ ....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 219 -~----------~~-~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~fL~s~~~~~itG~--~i~vdGG 269 (277)
T 4fc7_A 219 -L----------GG-PQASLSTKVTAS---------PLQRLGNKTEIAHSVLYLASPLASYVTGA--VLVADGG 269 (277)
T ss_dssp -H----------SC-CHHHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -c----------cC-CHHHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCCccCCcCCC--EEEECCC
Confidence 0 00 011222222222 233578999999999999975443 455 9999875
No 166
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.92 E-value=7.2e-24 Score=203.72 Aligned_cols=228 Identities=14% Similarity=0.085 Sum_probs=163.5
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|+
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dl 102 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC----------------DSVVDEIKS-FGYESSGYAGDV 102 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHH----------------HHHHHHHHT-TTCCEEEEECCT
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHH----------------HHHHHHHHh-cCCceeEEECCC
Confidence 345789999999999999999999999999999987653311 111111211 135788999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~ 231 (479)
+|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 103 ~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~iv~isS~ 181 (285)
T 2c07_A 103 SKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG-RIINISSI 181 (285)
T ss_dssp TCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE-EEEEECCT
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-EEEEECCh
Confidence 9999998888642 6999999999764322 223455677889999999888888775 34555 99999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+.. ..+...|+.+|++.+.+++.++.++ |+++++++||.|.++....
T Consensus 182 ~~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---- 233 (285)
T 2c07_A 182 VGLTG------------------------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK---- 233 (285)
T ss_dssp HHHHC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------
T ss_pred hhccC------------------------CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh----
Confidence 54421 1236789999999999999998875 8999999999998875321
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+........+ ...+++++|+|++++.++..+.. .|+ ++++.++
T Consensus 234 ---------------~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~~~~~~G~--~i~v~gG 282 (285)
T 2c07_A 234 ---------------ISEQIKKNIISNIP---------AGRMGTPEEVANLACFLSSDKSGYINGR--VFVIDGG 282 (285)
T ss_dssp ---------------CCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------cCHHHHHHHHhhCC---------CCCCCCHHHHHHHHHHHhCCCcCCCCCC--EEEeCCC
Confidence 00122222222211 23579999999999999976433 455 9999875
No 167
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.92 E-value=3.1e-24 Score=203.55 Aligned_cols=230 Identities=15% Similarity=0.096 Sum_probs=160.1
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+.+++|+||||||+|+||.+++++|+++|++|++++|..... +......+.++.++.+|+
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~--------------------~~~~~~~~~~~~~~~~D~ 64 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA--------------------ERVAGEIGDAALAVAADI 64 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--------------------HHHHHHHCTTEEEEECCT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH--------------------HHHHHHhCCceEEEEecC
Confidence 456789999999999999999999999999999999864321 111111245789999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCcc--cccccccccchhhhhhHHHHHHHHHHHHHc----C---CcceEEE
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAP--YSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R---QECHLVK 227 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g---~~~~~V~ 227 (479)
+|.++++++++.. ++|+||||||..... ....+++++..++++|+.|+.++++++... + ...+||+
T Consensus 65 ~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~ 144 (261)
T 3n74_A 65 SKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILN 144 (261)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 9999998888754 799999999976522 222356677889999999999998887432 1 1237999
Q ss_pred eeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCc
Q 011706 228 LGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDE 304 (479)
Q Consensus 228 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~ 304 (479)
+||...+. +......|+.+|++.+.+++.++.+ .|+++++++||.+..+....
T Consensus 145 isS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 200 (261)
T 3n74_A 145 VASTGAGR------------------------PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT 200 (261)
T ss_dssp ECCTTTTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------
T ss_pred eCchhhcC------------------------CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhh
Confidence 99965442 2234678999999999999999988 48999999999998875321
Q ss_pred hhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
+.... .......+.+......+++++|+|++++.++..... .|+ ++++.++
T Consensus 201 -----------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~--~i~vdgG 253 (261)
T 3n74_A 201 -----------------------FMGED-SEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGV--ALDVDGG 253 (261)
T ss_dssp ----------------------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred -----------------------hcccC-cHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCc--EEEecCC
Confidence 00000 000011112223445789999999999999865443 455 9999885
No 168
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.92 E-value=6.7e-24 Score=199.45 Aligned_cols=228 Identities=12% Similarity=0.081 Sum_probs=164.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... +...+. .++.++.+|++|
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--------------------~~~~~~--~~~~~~~~D~~~ 61 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL--------------------QELEKY--PGIQTRVLDVTK 61 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--------------------GGGGGS--TTEEEEECCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH--------------------HHHHhc--cCceEEEeeCCC
Confidence 5689999999999999999999999999999999854311 111111 268889999999
Q ss_pred hHHHHHHhhhc-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccccccCC
Q 011706 164 FEFLSESFKSF-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGEYGTP 237 (479)
Q Consensus 164 ~~~~~~~~~~~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v~g~~ 237 (479)
+++++++++.+ ++|+||||||...... ...+++++...+++|+.|+.++++++.. .+.+ +||++||...+...
T Consensus 62 ~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~ 140 (246)
T 2ag5_A 62 KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG-NIINMSSVASSVKG 140 (246)
T ss_dssp HHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCSBTTTBC
T ss_pred HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEechHhCcCC
Confidence 99999887654 6999999999765332 2235566788899999999999998753 4555 99999996544211
Q ss_pred CCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhcc
Q 011706 238 NIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCNR 314 (479)
Q Consensus 238 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~ 314 (479)
..+...|+.+|++.+.+++.++.++ |++++++|||.|++|..... +...
T Consensus 141 -----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~ 192 (246)
T 2ag5_A 141 -----------------------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQER-----IQAR 192 (246)
T ss_dssp -----------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHH-----HHHS
T ss_pred -----------------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhh-----hhcc
Confidence 0136789999999999999999875 89999999999998742110 0000
Q ss_pred cCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 315 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. ........+....+ ...+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 193 ----~----~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~~l~s~~~~~~tG~--~i~vdgG 242 (246)
T 2ag5_A 193 ----G----NPEEARNDFLKRQK---------TGRFATAEEIAMLCVYLASDESAYVTGN--PVIIDGG 242 (246)
T ss_dssp ----S----SHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHHHHSGGGTTCCSC--EEEECTT
T ss_pred ----c----CcHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCccccCCCCC--EEEECCC
Confidence 0 00111222222111 12478999999999999975443 355 8998875
No 169
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.92 E-value=3e-24 Score=207.22 Aligned_cols=233 Identities=14% Similarity=0.114 Sum_probs=169.0
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|++|||||+|+||.+++++|+++|++|+++++..... ..+.+.......+.++.++.+|+
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~Dv 109 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEE---------------DAQQVKALIEECGRKAVLLPGDL 109 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHH---------------HHHHHHHHHHHTTCCEEECCCCT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchh---------------HHHHHHHHHHHcCCcEEEEEecC
Confidence 346799999999999999999999999999999988753211 00111111112246788999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEeecccc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKLGTMGE 233 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~SS~~v 233 (479)
+|.++++++++.. ++|+||||||.... .....+.+++.+++++|+.|+.++++++..... +.+||++||...
T Consensus 110 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~ 189 (294)
T 3r3s_A 110 SDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_dssp TSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence 9999988887643 79999999997542 223346667889999999999999999976531 238999999776
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+.. ......|+.||++.+.+++.++.++ |+++++++||.|+++......
T Consensus 190 ~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---- 241 (294)
T 3r3s_A 190 YQP------------------------SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG---- 241 (294)
T ss_dssp TSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT----
T ss_pred ccC------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC----
Confidence 632 2346889999999999999999886 899999999999886310000
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
... .... .+........+..++|+|++++.++..... .|+ ++++.++
T Consensus 242 ---------~~~----~~~~---------~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~--~i~vdGG 290 (294)
T 3r3s_A 242 ---------QTQ----DKIP---------QFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE--VHGVCGG 290 (294)
T ss_dssp ---------SCG----GGST---------TTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------CCH----HHHH---------HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCC--EEEECCC
Confidence 000 0000 011222344678899999999999876543 355 9999875
No 170
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.92 E-value=1.1e-24 Score=207.58 Aligned_cols=228 Identities=12% Similarity=0.033 Sum_probs=167.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dv~ 87 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGA----------------EGIGAAFKQ-AGLEGRGAVLNVN 87 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHHH-HTCCCEEEECCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEEEeCC
Confidence 46789999999999999999999999999999999864321 111112211 2357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~ 166 (270)
T 3ftp_A 88 DATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG-RIVNITSVV 166 (270)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEECchh
Confidence 999998888754 7999999999765432 2335567888999999999999998853 3444 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 167 ~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----- 217 (270)
T 3ftp_A 167 GSA------------------------GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG----- 217 (270)
T ss_dssp HHH------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-----
T ss_pred hCC------------------------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-----
Confidence 442 22336899999999999999999884 8999999999997763110
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
........+... .....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 218 --------------~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~itG~--~i~vdGG~ 267 (270)
T 3ftp_A 218 --------------LPQEQQTALKTQ---------IPLGRLGSPEDIAHAVAFLASPQAGYITGT--TLHVNGGM 267 (270)
T ss_dssp --------------SCHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred --------------cCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCCCcCCccCc--EEEECCCc
Confidence 001112222222 2234678999999999999865433 455 99998853
No 171
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.92 E-value=2.1e-24 Score=202.64 Aligned_cols=224 Identities=13% Similarity=0.122 Sum_probs=158.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ecccccccccccCCCCCCccchhhhhhhhhcccCCCceeE-EEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIV-DSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIEL-YIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~-dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~Dl~d 163 (479)
+|+||||||+|+||.+++++|+++|++|+++ +|..... .+..+.+.. .+.++.. +.+|++|
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~~D~~~ 63 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKA----------------EEVAEEARR-RGSPLVAVLGANLLE 63 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHH----------------HHHHHHHHH-TTCSCEEEEECCTTS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH----------------HHHHHHHHh-cCCceEEEEeccCCC
Confidence 4789999999999999999999999999998 5543211 111111111 1245666 8999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v 233 (479)
.++++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++ ++.+.+ +||++||...
T Consensus 64 ~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~-~iv~~sS~~~ 142 (245)
T 2ph3_A 64 AEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFG-RIVNITSVVG 142 (245)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC-EEEEEeChhh
Confidence 99988887632 7999999999764322 22344567788999999966666554 455666 9999999643
Q ss_pred -ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 234 -YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 234 -~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
++. .+...|+.+|++.+.+++.+++++ |++++++|||.++++....
T Consensus 143 ~~~~-------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----- 192 (245)
T 2ph3_A 143 ILGN-------------------------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER----- 192 (245)
T ss_dssp HHCC-------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-----
T ss_pred ccCC-------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-----
Confidence 332 236789999999999999999886 8999999999998874210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
....+...+..+.+ ...+++++|+|++++.++..+.. .|+ +|++.++.
T Consensus 193 --------------~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gg~ 242 (245)
T 2ph3_A 193 --------------LPQEVKEAYLKQIP---------AGRFGRPEEVAEAVAFLVSEKAGYITGQ--TLCVDGGL 242 (245)
T ss_dssp --------------SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTTC
T ss_pred --------------cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccccccCC--EEEECCCC
Confidence 00112222222211 24678999999999999876432 355 99998864
No 172
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.92 E-value=9.2e-24 Score=201.00 Aligned_cols=236 Identities=14% Similarity=0.120 Sum_probs=164.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl 161 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+... .+.++.++.+|+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~D~ 73 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGL----------------EASKAAVLETAPDAEVLTTVADV 73 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHCTTCCEEEEECCT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHhhcCCceEEEEEccC
Confidence 35789999999999999999999999999999999864321 1111111111 135788999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCc-c-cccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSA-P-YSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-~-~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS 230 (479)
+|+++++++++.. ++|+||||||.... . ....+.+++.+++++|+.|+.++++++ ++.+.+ +||++||
T Consensus 74 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS 152 (267)
T 1iy8_A 74 SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG-MVVNTAS 152 (267)
T ss_dssp TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Confidence 9999998888743 69999999997643 2 223355677889999999998776655 444555 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+. +..+...|+.||++.+.+++.++.++ |+++++++||.|+++......
T Consensus 153 ~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~- 207 (267)
T 1iy8_A 153 VGGIR------------------------GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM- 207 (267)
T ss_dssp GGGTS------------------------BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-
T ss_pred hhhcc------------------------CCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc-
Confidence 65442 11236799999999999999998874 899999999999876311000
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.... ..........+.... ....+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 208 --~~~~--------~~~~~~~~~~~~~~~---------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~--~i~vdGG 262 (267)
T 1iy8_A 208 --KQLD--------PENPRKAAEEFIQVN---------PSKRYGEAPEIAAVVAFLLSDDASYVNAT--VVPIDGG 262 (267)
T ss_dssp --HHHC--------TTCHHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred --cccC--------hhhhhhHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCccccCCCCC--EEEECCC
Confidence 0000 000111111222111 223578999999999999875433 455 8999875
No 173
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.92 E-value=2.5e-24 Score=204.44 Aligned_cols=226 Identities=11% Similarity=0.022 Sum_probs=162.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|.... +.++.++.+|++|
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------------------~~~~~~~~~Dl~~ 57 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------------------EAKYDHIECDVTN 57 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------------------SCSSEEEECCTTC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------------------CCceEEEEecCCC
Confidence 468999999999999999999999999999999875431 1467889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... +.+ +||++||...
T Consensus 58 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~ 136 (264)
T 2dtx_A 58 PDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDP-SIVNISSVQA 136 (264)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc-EEEEECCchh
Confidence 99998887743 6999999999754322 22355567889999999999999988653 444 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC--CceEEeecCeeecCCCCchhhhHhh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
+. +..+...|+.||++.+.+++.++.+++ +++++++||.|.++.... .
T Consensus 137 ~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~------~ 186 (264)
T 2dtx_A 137 SI------------------------ITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK------A 186 (264)
T ss_dssp TS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH------H
T ss_pred cc------------------------CCCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh------h
Confidence 53 223468999999999999999998875 999999999997653110 0
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.... .+............+... .....+++++|+|++++.++..+.. .|+ ++++.++
T Consensus 187 ~~~~--~~~~~~~~~~~~~~~~~~---------~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~--~i~vdGG 245 (264)
T 2dtx_A 187 AELE--VGSDPMRIEKKISEWGHE---------HPMQRIGKPQEVASAVAFLASREASFITGT--CLYVDGG 245 (264)
T ss_dssp HHHH--HCSCHHHHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred hhcc--cccCchhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhcCCCCc--EEEECCC
Confidence 0000 000000000111111111 1224589999999999999976433 354 8998875
No 174
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.92 E-value=6.6e-24 Score=200.49 Aligned_cols=230 Identities=14% Similarity=0.091 Sum_probs=168.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+. .+.++.++.+|++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~----~~~~~~~~~~Dv~ 64 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNI----------------ARIREE----FGPRVHALRSDIA 64 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHH----HGGGEEEEECCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHH----hCCcceEEEccCC
Confidence 35789999999999999999999999999999999864321 111111 1357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYG 235 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g 235 (479)
|.++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++...- .+.+||++||...+.
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~ 144 (255)
T 4eso_A 65 DLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG 144 (255)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC
Confidence 999988877643 6999999999865433 233666788899999999999999997641 123899999976542
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+..+...|+.||++.+.+++.++.++ |+++++++||.|..|......
T Consensus 145 ------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~------ 194 (255)
T 4eso_A 145 ------------------------GHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG------ 194 (255)
T ss_dssp ------------------------BCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTT------
T ss_pred ------------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccccc------
Confidence 22346899999999999999999985 899999999999988543210
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
........+....... .....+.+++|+|++++.++.. .. .|+ ++++.++
T Consensus 195 -------~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~-~~~itG~--~i~vdGG 246 (255)
T 4eso_A 195 -------ITEAERAEFKTLGDNI---------TPMKRNGTADEVARAVLFLAFE-ATFTTGA--KLAVDGG 246 (255)
T ss_dssp -------SCHHHHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHHT-CTTCCSC--EEEESTT
T ss_pred -------CChhhHHHHHHHHhcc---------CCCCCCcCHHHHHHHHHHHcCc-CcCccCC--EEEECCC
Confidence 0001111222222221 1234567999999999998875 33 355 9999885
No 175
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.92 E-value=1.1e-23 Score=201.28 Aligned_cols=230 Identities=14% Similarity=0.017 Sum_probs=169.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dl~ 91 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL----------------QVVADEIAG-VGGKALPIRCDVT 91 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG----------------HHHHHHHHH-TTCCCEEEECCTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCeEEEEEcCCC
Confidence 46789999999999999999999999999999999864321 111122211 2357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccc-cccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYS-MIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||....... ..+.+++.+++++|+.|+.++++++.. .+.+.+||++||..
T Consensus 92 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~ 171 (276)
T 3r1i_A 92 QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMS 171 (276)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchH
Confidence 999999888754 79999999998654332 335667888999999999999998754 33323899999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+... ...+...|+.||++.+.+++.++.+ .|+++++++||.|..+.....
T Consensus 172 ~~~~~----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---- 225 (276)
T 3r1i_A 172 GHIIN----------------------IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---- 225 (276)
T ss_dssp GTSCC----------------------CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG----
T ss_pred hcccC----------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc----
Confidence 43211 1124678999999999999999998 489999999999988754321
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
..+........ ....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 226 ----------------~~~~~~~~~~~---------p~~r~~~pedvA~~v~fL~s~~~~~itG~--~i~vdGG~ 273 (276)
T 3r1i_A 226 ----------------ADYHALWEPKI---------PLGRMGRPEELTGLYLYLASAASSYMTGS--DIVIDGGY 273 (276)
T ss_dssp ----------------GGGHHHHGGGS---------TTSSCBCGGGSHHHHHHHHSGGGTTCCSC--EEEESTTT
T ss_pred ----------------hHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCccCc--EEEECcCc
Confidence 11111222211 223578899999999999976443 455 99998764
No 176
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.92 E-value=3.2e-24 Score=204.12 Aligned_cols=243 Identities=9% Similarity=0.058 Sum_probs=168.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl 161 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+... .+..+..+.+|+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~~D~ 70 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENV----------------NETIKEIRAQYPDAILQPVVADL 70 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHHHHCTTCEEEEEECCT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHhhCCCceEEEEecCC
Confidence 46789999999999999999999999999999999865421 1122222221 134678899999
Q ss_pred CChHHHHHHhhhc-CCCEEEEcccccCcccc-cccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccccc
Q 011706 162 CDFEFLSESFKSF-EPDAVVHFGEQRSAPYS-MIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGEYG 235 (479)
Q Consensus 162 ~d~~~~~~~~~~~-~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v~g 235 (479)
+|.++++++++.+ ++|+||||||....... ..+.+++.+++++|+.|+.++++++.. .+.+ +||++||...+.
T Consensus 71 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~ 149 (267)
T 3t4x_A 71 GTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEG-RVIFIASEAAIM 149 (267)
T ss_dssp TSHHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEE-EEEEECCGGGTS
T ss_pred CCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-EEEEEcchhhcc
Confidence 9999999998876 69999999998654332 335567888899999998888777643 4444 999999976542
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+..+...|+.||++.+.+++.++.++ |++++++.||.|..+... .+.
T Consensus 150 ------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~~ 199 (267)
T 3t4x_A 150 ------------------------PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVE------TML 199 (267)
T ss_dssp ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHH------HHH
T ss_pred ------------------------CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHH------HHH
Confidence 22347899999999999999999886 699999999998776211 000
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
+....... .............. ........+.+++|+|++++.++..... .|+ ++++.++
T Consensus 200 ~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~--~i~vdGG 261 (267)
T 3t4x_A 200 NSLYPNEQ--LTIEEAEKRFMKEN-----RPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGS--ALRIDGG 261 (267)
T ss_dssp HHSSTTSC--CCHHHHHHHHHHHH-----CTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred hhcCcccC--CCHHHHHHHHhhcc-----CCcccccCccCHHHHHHHHHHHcCccccCccCC--eEEECCC
Confidence 00000000 00011111111100 0112245789999999999999875443 455 9999885
No 177
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.92 E-value=4.9e-25 Score=201.41 Aligned_cols=196 Identities=16% Similarity=0.066 Sum_probs=149.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+||||||+|+||++++++|+++ +|++++|..... .+..... .. .++.+|++|+++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~----------------~~~~~~~-----~~-~~~~~D~~~~~~ 56 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGAL----------------AELAREV-----GA-RALPADLADELE 56 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHH----------------HHHHHHH-----TC-EECCCCTTSHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHH----------------HHHHHhc-----cC-cEEEeeCCCHHH
Confidence 58999999999999999999998 999998854311 0111111 11 788899999999
Q ss_pred HHHHhhh-cCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcCC
Q 011706 167 LSESFKS-FEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEG 244 (479)
Q Consensus 167 ~~~~~~~-~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e~ 244 (479)
++++++. .++|+||||||...... ...+.+++..++++|+.|+.++++++++.+.+ +||++||...|.
T Consensus 57 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~sS~~~~~--------- 126 (207)
T 2yut_A 57 AKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGA-RAVFFGAYPRYV--------- 126 (207)
T ss_dssp HHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEE-EEEEECCCHHHH---------
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCc-EEEEEcChhhcc---------
Confidence 9998873 26899999999754322 22345567788999999999999999766655 999999987763
Q ss_pred ceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 245 YITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
+..+...|+.+|++.|.+++.++.+ .|++++++|||.++++...
T Consensus 127 ---------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~------------------ 173 (207)
T 2yut_A 127 ---------------QVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA------------------ 173 (207)
T ss_dssp ---------------SSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG------------------
T ss_pred ---------------CCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc------------------
Confidence 2234789999999999999999888 5899999999999987310
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
+.+...+.+++++|+|++++.+++++..
T Consensus 174 --------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 174 --------------------PLGGPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp --------------------GGTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred --------------------ccCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 0112346899999999999999987654
No 178
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.92 E-value=5.1e-24 Score=202.57 Aligned_cols=228 Identities=15% Similarity=0.191 Sum_probs=164.9
Q ss_pred CCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGGD--GYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGat--G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+++|+||||||+ |+||.+++++|+++|++|++++|... . .+.++.+.... ....++.+|+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~----------------~~~~~~l~~~~-~~~~~~~~D~ 68 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L----------------KGRVEEFAAQL-GSDIVLQCDV 68 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-T----------------HHHHHHHHHHT-TCCCEEECCT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHH-H----------------HHHHHHHHHhc-CCcEEEEccC
Confidence 467899999999 99999999999999999999988541 0 01112221111 2347899999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCc-----cccc-ccccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEee
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSM-IDRSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKLG 229 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~-~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~S 229 (479)
+|+++++++++.. ++|+||||||.... +... .+.+++..++++|+.|+.++++++...-. ..+||++|
T Consensus 69 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 69 AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp TCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 9999998888753 68999999997542 1122 34556788999999999999999976521 13999999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchh
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
|...+. +..+...|+.||++.+.+++.++.++ |+++++++||.|+++.....
T Consensus 149 S~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~- 203 (265)
T 1qsg_A 149 YLGAER------------------------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI- 203 (265)
T ss_dssp CGGGTS------------------------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-
T ss_pred chhhcc------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-
Confidence 965542 11235789999999999999999886 89999999999999853210
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.....+...+..+.+ ...+.+++|+|++++.++..... .|+ +|++.++
T Consensus 204 ----------------~~~~~~~~~~~~~~p---------~~~~~~~~dva~~v~~l~s~~~~~~tG~--~~~vdgG 253 (265)
T 1qsg_A 204 ----------------KDFRKMLAHCEAVTP---------IRRTVTIEDVGNSAAFLCSDLSAGISGE--VVHVDGG 253 (265)
T ss_dssp ----------------TTHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred ----------------cccHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCchhcCccCC--EEEECCC
Confidence 001222222222222 12468999999999999875433 355 9999885
No 179
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.92 E-value=4.6e-24 Score=200.14 Aligned_cols=223 Identities=15% Similarity=0.095 Sum_probs=161.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIV-DSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~-dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
+|+||||||+|+||.+++++|+++|++|+++ +|..... .+..+.+.. .+.++.++.+|++|+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~~~ 63 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAA----------------EEVSKQIEA-YGGQAITFGGDVSKE 63 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------------HHHHHHHHH-HTCEEEEEECCTTSH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH----------------HHHHHHHHh-cCCcEEEEeCCCCCH
Confidence 5799999999999999999999999999985 5543211 111111111 134788999999999
Q ss_pred HHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccc-
Q 011706 165 EFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGE- 233 (479)
Q Consensus 165 ~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v- 233 (479)
++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.+ .+.+ +||++||...
T Consensus 64 ~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~ 142 (244)
T 1edo_A 64 ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG-RIINIASVVGL 142 (244)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-EEEEECChhhc
Confidence 9998888743 6999999999765322 2234456778899999999999998865 3555 9999999644
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
++. .+...|+.+|++.+.+++.++.++ |++++++|||.++++....
T Consensus 143 ~~~-------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------ 191 (244)
T 1edo_A 143 IGN-------------------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK------ 191 (244)
T ss_dssp HCC-------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT------
T ss_pred CCC-------------------------CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh------
Confidence 332 236789999999999999998874 8999999999998874210
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC---CCCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA---QPGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~~~~ni~~~ 381 (479)
....+........ ....+++++|+|++++.++..+. ..|+ +|++.++
T Consensus 192 -------------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~~G~--~~~v~gG 241 (244)
T 1edo_A 192 -------------LGEDMEKKILGTI---------PLGRTGQPENVAGLVEFLALSPAASYITGQ--AFTIDGG 241 (244)
T ss_dssp -------------TCHHHHHHHHTSC---------TTCSCBCHHHHHHHHHHHHHCSGGGGCCSC--EEEESTT
T ss_pred -------------cChHHHHHHhhcC---------CCCCCCCHHHHHHHHHHHhCCCccCCcCCC--EEEeCCC
Confidence 0112222222221 12357899999999999985432 2355 9999875
No 180
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.92 E-value=1.4e-23 Score=201.65 Aligned_cols=228 Identities=14% Similarity=0.087 Sum_probs=164.9
Q ss_pred CCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGGD--GYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGat--G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+++|+||||||+ |+||.+++++|+++|++|++++|.... .+.++.+.... .++.++.+|+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------------~~~~~~l~~~~-~~~~~~~~Dl 80 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKL-----------------EKRVREIAKGF-GSDLVVKCDV 80 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-----------------HHHHHHHHHHT-TCCCEEECCT
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-----------------HHHHHHHHHhc-CCeEEEEcCC
Confidence 568999999999 999999999999999999999885420 01122221111 2478899999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCc-----ccccccccccchhhhhhHHHHHHHHHHHHHcCC--cceEEEee
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ--ECHLVKLG 229 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~--~~~~V~~S 229 (479)
+|+++++++++.. ++|+||||||.... +....+.+++..++++|+.|+.++++++..... +.+||++|
T Consensus 81 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~is 160 (285)
T 2p91_A 81 SLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLS 160 (285)
T ss_dssp TCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 9999998887753 69999999997642 122345567788999999999999999976532 23999999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchh
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
|...+. +..+...|+.||++.+.+++.++.++ |+++++++||.|+++......
T Consensus 161 S~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 216 (285)
T 2p91_A 161 YYGAEK------------------------VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT 216 (285)
T ss_dssp CGGGTS------------------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT
T ss_pred cchhcc------------------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc
Confidence 965442 11235789999999999999998875 899999999999998643100
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
....+...+....+ ...+.+++|+|++++.++..... .|+ +|++.++
T Consensus 217 -----------------~~~~~~~~~~~~~p---------~~~~~~~~dva~~~~~l~s~~~~~~tG~--~~~vdgg 265 (285)
T 2p91_A 217 -----------------GFHLLMEHTTKVNP---------FGKPITIEDVGDTAVFLCSDWARAITGE--VVHVDNG 265 (285)
T ss_dssp -----------------THHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred -----------------chHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCCcccCCCCC--EEEECCC
Confidence 01122222222211 12467899999999999865433 355 8999875
No 181
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.92 E-value=2.1e-23 Score=199.45 Aligned_cols=226 Identities=12% Similarity=0.021 Sum_probs=163.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. . .++.++.+|++
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~-~~~~~~~~Dv~ 87 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEAC----------------ADTATRLSA-Y-GDCQAIPADLS 87 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH----------------HHHHHHHTT-S-SCEEECCCCTT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-c-CceEEEEeeCC
Confidence 46789999999999999999999999999999998864321 111122211 1 26888999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCC----cceEEEe
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQ----ECHLVKL 228 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~----~~~~V~~ 228 (479)
|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+. + +||++
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g-~iV~i 166 (276)
T 2b4q_A 88 SEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPA-RVINI 166 (276)
T ss_dssp SHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCE-EEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCC-EEEEE
Confidence 999998887643 6999999999765322 233556678899999999998888774 3343 5 99999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCc
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDE 304 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~ 304 (479)
||...+... .... .|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 167 sS~~~~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 222 (276)
T 2b4q_A 167 GSVAGISAM------------------------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH 222 (276)
T ss_dssp CCGGGTCCC------------------------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH
T ss_pred CCHHHcCCC------------------------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh
Confidence 997655321 1234 89999999999999999874 8999999999998875311
Q ss_pred hhhhHhhhcccCCCCcccchHHHHHHHHhc--CCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCC
Q 011706 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAV--GHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFT 380 (479)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~ 380 (479)
........... .. ....+.+++|+|++++.++..+.. .|+ ++++.+
T Consensus 223 -------------------~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~l~s~~~~~~tG~--~i~vdG 272 (276)
T 2b4q_A 223 -------------------IANDPQALEADSASI---------PMGRWGRPEEMAALAISLAGTAGAYMTGN--VIPIDG 272 (276)
T ss_dssp -------------------HHHCHHHHHHHHHTS---------TTSSCCCHHHHHHHHHHHHSGGGTTCCSC--EEEEST
T ss_pred -------------------cchhHHHHHHhhcCC---------CCCCcCCHHHHHHHHHHHhCccccCCCCC--EEEeCC
Confidence 00001111111 11 123578999999999999976533 355 899887
Q ss_pred C
Q 011706 381 E 381 (479)
Q Consensus 381 ~ 381 (479)
+
T Consensus 273 G 273 (276)
T 2b4q_A 273 G 273 (276)
T ss_dssp T
T ss_pred C
Confidence 5
No 182
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=6.8e-24 Score=200.91 Aligned_cols=234 Identities=12% Similarity=0.059 Sum_probs=163.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~Dv~ 68 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEG---------------AATAVAEIEK-LGRSALAIKADLT 68 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHH---------------HHHHHHHHHT-TTSCCEEEECCTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---------------HHHHHHHHHh-cCCceEEEEcCCC
Confidence 45789999999999999999999999999999985543211 1111222221 2457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEeeccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKLGTMGEY 234 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~SS~~v~ 234 (479)
|.++++++++.. ++|+||||||.... .....+++++.+++++|+.|+.++++++...-. ..+||++||...+
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~ 148 (259)
T 3edm_A 69 NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGR 148 (259)
T ss_dssp CHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhc
Confidence 999998888754 69999999997532 222345667788999999999999999976521 2389999997655
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC--CceEEeecCeeecCCCCchhhhHhhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
.. +......|+.||++.+.+++.++.+++ ++++++.||.|..+....
T Consensus 149 ~~-----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~-------- 197 (259)
T 3edm_A 149 DG-----------------------GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDT-------- 197 (259)
T ss_dssp HC-----------------------CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------
T ss_pred cC-----------------------CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccc--------
Confidence 11 112367899999999999999999864 999999999998764321
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCCcC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQFS 384 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~~s 384 (479)
+. .......+........+.+++|+|++++.++..... .|+ +|++.|+...
T Consensus 198 ---------------~~----~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~--~i~vdGg~~~ 250 (259)
T 3edm_A 198 ---------------FT----KPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGA--CYDINGGVLF 250 (259)
T ss_dssp ------------------------------------CCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESBCSSB
T ss_pred ---------------cc----ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCC--EEEECCCcCC
Confidence 00 000011111223345678999999999999976544 455 9999886533
No 183
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.92 E-value=1.9e-24 Score=203.23 Aligned_cols=227 Identities=15% Similarity=0.102 Sum_probs=165.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+ +.++.++.+|++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~Dv~ 62 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGA----------------KAAAASI----GKKARAIAADIS 62 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH----------------HHHHHHH----CTTEEECCCCTT
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHh----CCceEEEEcCCC
Confidence 45789999999999999999999999999999998864321 1111111 457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++ ++.+...+||++||..
T Consensus 63 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 142 (247)
T 3rwb_A 63 DPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNT 142 (247)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTH
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchh
Confidence 999998888754 7999999999865432 23466678899999999999999884 4445223999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.+ +|+++++++||.|..+......
T Consensus 143 ~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--- 195 (247)
T 3rwb_A 143 FFA------------------------GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASP--- 195 (247)
T ss_dssp HHH------------------------TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG---
T ss_pred hcc------------------------CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC---
Confidence 442 2233689999999999999999988 4899999999999776321100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
......+.... .....+...+|++++++.++..... .|+ ++++.++.
T Consensus 196 ------------~~~~~~~~~~~------------~~~~r~~~pedva~~v~~L~s~~~~~itG~--~i~vdGG~ 244 (247)
T 3rwb_A 196 ------------HNEAFGFVEML------------QAMKGKGQPEHIADVVSFLASDDARWITGQ--TLNVDAGM 244 (247)
T ss_dssp ------------GGGGHHHHHHH------------SSSCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred ------------hhHHHHHHhcc------------cccCCCcCHHHHHHHHHHHhCccccCCCCC--EEEECCCc
Confidence 00011111110 1123467899999999999976544 455 99998753
No 184
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.92 E-value=3.5e-24 Score=201.85 Aligned_cols=227 Identities=12% Similarity=0.034 Sum_probs=162.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. ..++.++.+|++|
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~--~~~~~~~~~D~~~ 65 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVG----------------EKAAKSVGT--PDQIQFFQHDSSD 65 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHCC--TTTEEEEECCTTC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHhhc--cCceEEEECCCCC
Confidence 5689999999999999999999999999999999864311 111111111 1478899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++. +.+.+.+||++||...
T Consensus 66 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 145 (251)
T 1zk4_A 66 EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG 145 (251)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchh
Confidence 99998888742 5999999999754322 223455678889999999888777654 3444139999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH-----hCCceEEeecCeeecCCCCchhhh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA-----WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
+.. ..+...|+.+|++.|.+++.++.+ .|++++++|||.|+++.....
T Consensus 146 ~~~------------------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~--- 198 (251)
T 1zk4_A 146 FVG------------------------DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL--- 198 (251)
T ss_dssp TSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS---
T ss_pred ccC------------------------CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc---
Confidence 532 233689999999999999988774 479999999999998742100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. ......... .......+++++|+|++++.++..+.. .|+ +|++.++
T Consensus 199 -------------~---~~~~~~~~~--------~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~--~~~v~gG 247 (251)
T 1zk4_A 199 -------------P---GAEEAMSQR--------TKTPMGHIGEPNDIAYICVYLASNESKFATGS--EFVVDGG 247 (251)
T ss_dssp -------------T---THHHHHTST--------TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -------------C---chhhhHHHh--------hcCCCCCCcCHHHHHHHHHHHcCcccccccCc--EEEECCC
Confidence 0 000111011 111234589999999999999976433 355 9999875
No 185
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.92 E-value=7.1e-24 Score=201.59 Aligned_cols=232 Identities=13% Similarity=0.005 Sum_probs=162.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++..... ..+..+.+. ..+.++.++.+|++
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~Dl~ 87 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAA---------------AEEVAGKIE-AAGGKALTAQADVS 87 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHH---------------HHHHHHHHH-HTTCCEEEEECCTT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHH---------------HHHHHHHHH-hcCCeEEEEEcCCC
Confidence 34689999999999999999999999999999876543211 111111111 12457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYG 235 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g 235 (479)
|+++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++...- .+.+||++||...+.
T Consensus 88 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~ 167 (267)
T 3u5t_A 88 DPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL 167 (267)
T ss_dssp CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc
Confidence 999998888754 7999999999865433 233556788899999999999999887641 123899999965542
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+......|+.||++.+.+++.++.++ |++++++.||.|..+.....
T Consensus 168 ------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------- 216 (267)
T 3u5t_A 168 ------------------------LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG------- 216 (267)
T ss_dssp ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------
T ss_pred ------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc-------
Confidence 12236789999999999999999985 79999999999977642110
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
........+.. ......+..++|+|++++.++......-.++++++.++
T Consensus 217 -----------~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 217 -----------KSDEVRDRFAK---------LAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp ---------------CHHHHHT---------SSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred -----------CCHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 00011111111 12334678999999999999976554333359998875
No 186
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.92 E-value=4e-23 Score=196.82 Aligned_cols=228 Identities=14% Similarity=0.060 Sum_probs=167.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~---------------~~~~~~~l~~-~~~~~~~~~~Dv~ 91 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAER---------------AQAVVSEIEQ-AGGRAVAIRADNR 91 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH---------------HHHHHHHHHh-cCCcEEEEECCCC
Confidence 45789999999999999999999999999999987654321 1111112211 2457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc--CCcceEEEeeccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF--RQECHLVKLGTMGEY 234 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--g~~~~~V~~SS~~v~ 234 (479)
|+++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++... .. .+||++||....
T Consensus 92 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~~~~ 170 (271)
T 3v2g_A 92 DAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSNLAE 170 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCGGGT
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeChhhc
Confidence 999988887754 7999999999865432 33466678889999999999999999765 33 399999985322
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
.. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 171 ~~-----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~------ 221 (271)
T 3v2g_A 171 LV-----------------------PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD------ 221 (271)
T ss_dssp CC-----------------------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS------
T ss_pred cC-----------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc------
Confidence 10 12346899999999999999999885 89999999999998864321
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..... ......+ ...+..++|+|++++.++..... .|+ ++++.++
T Consensus 222 ----------~~~~~----~~~~~~~---------~~r~~~pedvA~~v~fL~s~~~~~itG~--~i~vdGG 268 (271)
T 3v2g_A 222 ----------GDHAE----AQRERIA---------TGSYGEPQDIAGLVAWLAGPQGKFVTGA--SLTIDGG 268 (271)
T ss_dssp ----------CSSHH----HHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ----------chhHH----HHHhcCC---------CCCCCCHHHHHHHHHHHhCcccCCccCC--EEEeCcC
Confidence 01111 1112111 23467899999999999865433 455 9999875
No 187
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.92 E-value=1.1e-23 Score=204.28 Aligned_cols=232 Identities=16% Similarity=0.099 Sum_probs=165.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcc----cCCCceeEEE
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS----LTGKNIELYI 158 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~v~ 158 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|...... +..+.+.. ..+.++.++.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~~~ 78 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK----------------SAADELQANLPPTKQARVIPIQ 78 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----------------HHHHHHHHTSCTTCCCCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------HHHHHHHhhccccCCccEEEEe
Confidence 457899999999999999999999999999999998643211 11111111 1245789999
Q ss_pred cccCChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEe
Q 011706 159 GDICDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKL 228 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~ 228 (479)
+|++|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... +.+ +||++
T Consensus 79 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~iv~i 157 (303)
T 1yxm_A 79 CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG-SIVNI 157 (303)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE-EEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-eEEEE
Confidence 9999999998888753 5999999999654322 22345567788999999999999997652 334 89999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...++. .....|+.+|++.+.+++.++.++ |++++++|||.|+|+.....
T Consensus 158 sS~~~~~~-------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 212 (303)
T 1yxm_A 158 IVPTKAGF-------------------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVEN 212 (303)
T ss_dssp CCCCTTCC-------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTT
T ss_pred EeecccCC-------------------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhh
Confidence 99763321 235789999999999999999885 89999999999999842100
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
. ......+....... .....+++++|+|++++.++..... .|+ ++++.++.
T Consensus 213 ~---------------~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~--~~~v~gG~ 265 (303)
T 1yxm_A 213 Y---------------GSWGQSFFEGSFQK---------IPAKRIGVPEEVSSVVCFLLSPAASFITGQ--SVDVDGGR 265 (303)
T ss_dssp S---------------GGGGGGGGTTGGGG---------STTSSCBCTHHHHHHHHHHHSGGGTTCCSC--EEEESTTG
T ss_pred c---------------cccchHHHHHHHhc---------CcccCCCCHHHHHHHHHHHhCcccccCCCc--EEEECCCe
Confidence 0 00000011111111 1123578999999999999975433 355 99998863
No 188
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.92 E-value=1.1e-23 Score=201.55 Aligned_cols=231 Identities=13% Similarity=0.002 Sum_probs=169.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+. ..+.++.++.+|++|
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~-~~~~~~~~~~~Dv~~ 68 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNAL----------------AELTDEIA-GGGGEAAALAGDVGD 68 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHH----------------HHHHHHHT-TTTCCEEECCCCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHH-hcCCcEEEEECCCCC
Confidence 5689999999999999999999999999999998864321 11122221 124578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
+++++++++.. ++|+||||||.... +....+++++..++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 69 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~ 147 (280)
T 3tox_A 69 EALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGG-SLTFTSSFV 147 (280)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCSB
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEEcChh
Confidence 99998888743 79999999997632 223346667888999999999999998754 3444 999999966
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+.. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++......
T Consensus 148 ~~~~-----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--- 201 (280)
T 3tox_A 148 GHTA-----------------------GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANL--- 201 (280)
T ss_dssp TTTB-----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGS---
T ss_pred hCcC-----------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhc---
Confidence 5421 12346889999999999999999885 899999999999988643210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.+ ........+... .....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 202 --------~~----~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~a~~itG~--~i~vdGG 252 (280)
T 3tox_A 202 --------PG----AAPETRGFVEGL---------HALKRIARPEEIAEAALYLASDGASFVTGA--ALLADGG 252 (280)
T ss_dssp --------TT----CCTHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------cc----cCHHHHHHHhcc---------CccCCCcCHHHHHHHHHHHhCccccCCcCc--EEEECCC
Confidence 00 001122222222 2234678999999999999976544 355 9999886
No 189
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.92 E-value=1.7e-23 Score=197.45 Aligned_cols=226 Identities=14% Similarity=0.102 Sum_probs=164.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc-
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI- 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl- 161 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+......++.++.+|+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~D~~ 72 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKL----------------RQVASHINEETGRQPQWFILDLL 72 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHHSCCCEEEECCTT
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHhhcCCCceEEEEecc
Confidence 46799999999999999999999999999999999864321 1122222222234788999999
Q ss_pred -CChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEee
Q 011706 162 -CDFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLG 229 (479)
Q Consensus 162 -~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~S 229 (479)
+|.++++++++.. ++|+||||||.... +....+++++..++++|+.|+.++++++. +.+.+ +||++|
T Consensus 73 ~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~is 151 (252)
T 3f1l_A 73 TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG-SLVFTS 151 (252)
T ss_dssp TCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC-EEEEEC
T ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCC-EEEEEC
Confidence 9998888877643 69999999997532 33344666788899999999999999884 34445 999999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC--CceEEeecCeeecCCCCchhh
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ivRp~~v~Gp~~~~~~~ 307 (479)
|...+. +......|+.||++.+.+++.++.+++ ++++++.||.|..+.
T Consensus 152 S~~~~~------------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~------ 201 (252)
T 3f1l_A 152 SSVGRQ------------------------GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM------ 201 (252)
T ss_dssp CGGGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH------
T ss_pred Chhhcc------------------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch------
Confidence 965432 223468999999999999999999874 899999998886541
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCC-cCH
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQ-FSV 385 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~-~s~ 385 (479)
....... .....+.+++|++.+++.++......-.++++++.++. .++
T Consensus 202 ---------------------~~~~~~~---------~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 250 (252)
T 3f1l_A 202 ---------------------RASAFPT---------EDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGI 250 (252)
T ss_dssp ---------------------HHHHCTT---------CCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred ---------------------hhhhCCc---------cchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence 1111111 11235678999999999999765443223499998853 443
No 190
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.92 E-value=8.9e-24 Score=203.24 Aligned_cols=264 Identities=14% Similarity=0.109 Sum_probs=173.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++........ ........+.+...... ..+.++.++.+|++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~ 81 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNE----YPLATSRDLEEAGLEVE-KTGRKAYTAEVDVR 81 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSC----SCCCCHHHHHHHHHHHH-HTTSCEEEEECCTT
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccc----cchhhhHHHHHHHHHHH-hcCCceEEEEccCC
Confidence 46789999999999999999999999999999999863321110 00000111111111222 12467899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccC
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGT 236 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~ 236 (479)
|.++++++++.. ++|+||||||..... ...+.+++..++++|+.|+.++++++...- ...+||++||...+..
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 160 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIA 160 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccc
Confidence 999998887754 799999999986544 224566788899999999999999997652 2238999999654432
Q ss_pred C-CCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 237 P-NIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 237 ~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
. ..+..+. .+..+...|+.||++.+.+++.++.++ |+++++++||.|..+..........+.
T Consensus 161 ~~~~~~~~~--------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~ 226 (287)
T 3pxx_A 161 AAQPPGAGG--------------PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFR 226 (287)
T ss_dssp HHCCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHC
T ss_pred ccccccccc--------------cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhc
Confidence 1 1111111 122335789999999999999999986 899999999999988654311000000
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.... .............. . .....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 227 ~~~~-----~~~~~~~~~~~~~~-------~-~~~~~~~~p~dva~~v~fL~s~~a~~itG~--~i~vdGG 282 (287)
T 3pxx_A 227 PDLE-----APSRADALLAFPAM-------Q-AMPTPYVEASDISNAVCFLASDESRYVTGL--QFKVDAG 282 (287)
T ss_dssp TTSS-----SCCHHHHHHHGGGG-------C-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred cccc-----cchhHHHHhhhhhh-------c-ccCCCCCCHHHHHhhHheecchhhcCCCCc--eEeECch
Confidence 0000 00000001110000 1 1115789999999999999975443 455 9999875
No 191
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.92 E-value=5.9e-24 Score=202.59 Aligned_cols=230 Identities=12% Similarity=0.112 Sum_probs=168.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~ 85 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRV----------------AQTVQEFRN-VGHDAEAVAFDVT 85 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHH----------------HHHHHHHHH-TTCCEEECCCCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCceEEEEcCCC
Confidence 46789999999999999999999999999999988754321 111222221 2457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 86 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iV~isS~~ 164 (271)
T 4ibo_A 86 SESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYG-KIVNIGSLT 164 (271)
T ss_dssp CHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEccHH
Confidence 999998888754 6999999999865433 2346667888999999999999887754 3555 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.+ .|+++++++||.|..+......
T Consensus 165 ~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--- 217 (271)
T 4ibo_A 165 SEL------------------------ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI--- 217 (271)
T ss_dssp GTS------------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH---
T ss_pred hCC------------------------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc---
Confidence 431 2234689999999999999999988 4899999999999887432100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
. ...+...+.... ....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 218 ---~-----------~~~~~~~~~~~~---------p~~r~~~pedva~~v~~L~s~~~~~itG~--~i~vdGG~ 267 (271)
T 4ibo_A 218 ---D-----------NPEFDAWVKART---------PAKRWGKPQELVGTAVFLSASASDYVNGQ--IIYVDGGM 267 (271)
T ss_dssp ---H-----------CHHHHHHHHHHS---------TTCSCBCGGGGHHHHHHHHSGGGTTCCSC--EEEESTTG
T ss_pred ---c-----------CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCCCCc--EEEECCCe
Confidence 0 011222222222 223567899999999999876443 455 99998853
No 192
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.92 E-value=2e-23 Score=199.79 Aligned_cols=253 Identities=13% Similarity=0.034 Sum_probs=170.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++..+........ ......+.+..+... ..+.++.++.+|++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~ 83 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYD---PASPDDLSETVRLVE-AANRRIVAAVVDTR 83 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSC---CCCHHHHHHHHHHHH-HTTCCEEEEECCTT
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEecccccccccccc---ccCHHHHHHHHHHHH-hcCCeEEEEECCCC
Confidence 46789999999999999999999999999999998843211000000 000011111222221 22457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+...+||++||..
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~ 163 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA 163 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence 999998888752 6999999999865432 2346667889999999999999988643 33223999999966
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 164 ~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---- 215 (277)
T 3tsc_A 164 GMK------------------------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD---- 215 (277)
T ss_dssp GTS------------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH----
T ss_pred hCC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch----
Confidence 542 22336789999999999999999885 79999999999988753221
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCC-eEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHP-LTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~ 382 (479)
.............. .......... .+.+++|+|++++.++......-.++++++.++.
T Consensus 216 --------------~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 216 --------------MVTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp --------------HHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --------------hhhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 01111111111110 0011111122 4789999999999999765443222399998764
No 193
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.92 E-value=9.4e-24 Score=206.20 Aligned_cols=182 Identities=14% Similarity=0.102 Sum_probs=135.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++.+|...+.... .+ +.+.......+.++.++.+|++|
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~-----------~~-~~l~~~~~~~~~~~~~~~~Dvtd 70 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNAS-----------NV-EAIAGFARDNDVDLRTLELDVQS 70 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHH-----------HH-HHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHH-----------HH-HHHHHHHHhcCCcEEEEEeecCC
Confidence 4578999999999999999999999999999988753221110 00 11111111124578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v 233 (479)
.++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++ ++.+.+ +||++||...
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g-~iV~isS~~~ 149 (324)
T 3u9l_A 71 QVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHG-LLIWISSSSS 149 (324)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEEecchh
Confidence 99998888754 7999999999765432 33356677889999999999999998 555666 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCC
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVR 301 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~ 301 (479)
++.. ......|+.||++.|.+++.++.+ +|+++++|+||.|.++.
T Consensus 150 ~~~~-----------------------~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 150 AGGT-----------------------PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp TSCC-----------------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred ccCC-----------------------CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 5321 122578999999999999999988 48999999999998764
No 194
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.92 E-value=1.2e-23 Score=201.84 Aligned_cols=236 Identities=15% Similarity=0.111 Sum_probs=167.9
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~ 87 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEV----------------EEVADEIVG-AGGQAIALEADVS 87 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHTT-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEEccCC
Confidence 35689999999999999999999999999999999864321 111222211 2457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~ 231 (479)
|+++++++++.. ++|+||||||.... +....+++++.+++++|+.|+.++++++ ++.+.+ +||++||.
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~Iv~isS~ 166 (283)
T 3v8b_A 88 DELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGG-AIVVVSSI 166 (283)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCS
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-eEEEEcCh
Confidence 999998888754 79999999997543 2334466678889999999999999988 455555 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+.. .+..+...|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 167 ~~~~~----------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-- 222 (283)
T 3v8b_A 167 NGTRT----------------------FTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTK-- 222 (283)
T ss_dssp BTTTB----------------------CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTT--
T ss_pred hhccC----------------------CCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccc--
Confidence 54321 022346899999999999999999984 799999999999887543210
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCce--eccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQT--RGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.. .. .....+.......... ..+..++|+|++++.++..... .|+ ++++.++
T Consensus 223 -------------~~--~~----~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~--~i~vdGG 278 (283)
T 3v8b_A 223 -------------LR--HE----EETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGS--PVWIDGG 278 (283)
T ss_dssp -------------BC--CH----HHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred -------------cc--cc----hhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCC--EEEECcC
Confidence 00 00 0000011111111122 3567899999999999875443 355 9998875
No 195
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.92 E-value=1.1e-23 Score=203.88 Aligned_cols=225 Identities=14% Similarity=0.099 Sum_probs=156.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++|
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~d 91 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPAL----------------EQAVNGLRG-QGFDAHGVVCDVRH 91 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHh-cCCceEEEEccCCC
Confidence 5789999999999999999999999999999999865421 111222211 24578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v 233 (479)
.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+...+||++||...
T Consensus 92 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 171 (301)
T 3tjr_A 92 LDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAG 171 (301)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh
Confidence 99998888754 7999999999865432 2335567788999999999999998743 342239999999654
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +......|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 172 ~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---- 223 (301)
T 3tjr_A 172 LV------------------------PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE---- 223 (301)
T ss_dssp TS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHH----
T ss_pred cC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccc----
Confidence 42 22347899999999999999999885 799999999999776321000
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP 367 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 367 (479)
............+...++.......+++++|+|++++.+++.+
T Consensus 224 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 224 --------------RIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp --------------HHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred --------------cccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 0000000011112222233334457899999999999999864
No 196
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.91 E-value=1.4e-23 Score=198.64 Aligned_cols=237 Identities=12% Similarity=0.057 Sum_probs=163.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|++|||||+|+||.+++++|+++|++|++++|..... .+.+..+.+.. .+.++.++.+|++|++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~Dv~~~~ 66 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEE--------------QAAETIKLIEA-ADQKAVFVGLDVTDKA 66 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHH--------------HHHHHHHHHHT-TTCCEEEEECCTTCHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH--------------HHHHHHHHHHh-cCCcEEEEEccCCCHH
Confidence 68999999999999999999999999999998854320 01111112211 1357889999999999
Q ss_pred HHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CC-cceEEEeeccccc
Q 011706 166 FLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQ-ECHLVKLGTMGEY 234 (479)
Q Consensus 166 ~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~-~~~~V~~SS~~v~ 234 (479)
+++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++... +. + +||++||...+
T Consensus 67 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~ 145 (258)
T 3a28_C 67 NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKG-KIINAASIAAI 145 (258)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCC-EEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCc-EEEEECcchhc
Confidence 988887643 6999999999765422 23355677889999999999999988653 54 5 99999997554
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+..... ...+
T Consensus 146 ~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~ 199 (258)
T 3a28_C 146 Q------------------------GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQI--DAEL 199 (258)
T ss_dssp S------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHH--HHHH
T ss_pred c------------------------CCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhh--hhhh
Confidence 2 12336799999999999999999875 89999999999976531100 0000
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
...... . .......+... .....+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 200 ~~~~~~--~----~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~--~i~vdGG 254 (258)
T 3a28_C 200 SKINGK--P----IGENFKEYSSS---------IALGRPSVPEDVAGLVSFLASENSNYVTGQ--VMLVDGG 254 (258)
T ss_dssp HHHHCC--C----TTHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESSS
T ss_pred ccccCC--c----hHHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCcccCCCCCC--EEEECCC
Confidence 000000 0 00111111111 1223578999999999999976433 454 8998875
No 197
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.91 E-value=1.7e-23 Score=197.40 Aligned_cols=216 Identities=9% Similarity=-0.037 Sum_probs=150.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dv~ 66 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL----------------APLVAEIEA-AGGRIVARSLDAR 66 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGG----------------HHHHHHHHH-TTCEEEEEECCTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCeEEEEECcCC
Confidence 35689999999999999999999999999999999864421 111222222 1457899999999
Q ss_pred ChHHHHHHhhhc----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 163 DFEFLSESFKSF----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 163 d~~~~~~~~~~~----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||...
T Consensus 67 ~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~ 145 (252)
T 3h7a_A 67 NEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQG-KIFFTGATAS 145 (252)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEEEEGGG
T ss_pred CHHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECCHHH
Confidence 999999888754 7899999999865432 234566788899999999999988773 34555 9999999654
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCce-EEeecCeeecCCCCchhhhH
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRA-TDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~-~ivRp~~v~Gp~~~~~~~~~ 309 (479)
+. +......|+.||++.+.+++.++.++ |+++ +++.||.|..+....
T Consensus 146 ~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~----- 196 (252)
T 3h7a_A 146 LR------------------------GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE----- 196 (252)
T ss_dssp TC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------
T ss_pred cC------------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc-----
Confidence 32 22346899999999999999999885 7999 899999987764221
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
....... .+....... +.+++|+|++++.++..+..
T Consensus 197 --------------~~~~~~~---------~~~~~~~~~-~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 197 --------------RREQMFG---------KDALANPDL-LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp -----------------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred --------------cchhhhh---------hhhhcCCcc-CCCHHHHHHHHHHHHhCchh
Confidence 0000000 111112233 89999999999999987554
No 198
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.91 E-value=4.1e-23 Score=193.94 Aligned_cols=220 Identities=17% Similarity=0.119 Sum_probs=162.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|.... .+...... ++.++.+|++|
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------------------~~~~~~~~--~~~~~~~D~~~ 60 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP--------------------LREAAEAV--GAHPVVMDVAD 60 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHTT--TCEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--------------------HHHHHHHc--CCEEEEecCCC
Confidence 468999999999999999999999999999999885431 11111111 37889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++... +.+ +||++||...
T Consensus 61 ~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~ 139 (245)
T 1uls_A 61 PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG-SIVLTASRVY 139 (245)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEccchh
Confidence 99998887653 5999999999764322 23355677889999999999999888653 445 9999999764
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
++.+ ....|+.+|++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 140 ~~~~-------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----- 189 (245)
T 1uls_A 140 LGNL-------------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV----- 189 (245)
T ss_dssp GCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-----
T ss_pred cCCC-------------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-----
Confidence 4322 25789999999999999998874 89999999999987753210
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
............+ ...+.+.+|+|++++.++..+.. .|+ ++++.++
T Consensus 190 --------------~~~~~~~~~~~~p---------~~~~~~~~dvA~~v~~l~s~~~~~~tG~--~~~vdgG 237 (245)
T 1uls_A 190 --------------PEKVREKAIAATP---------LGRAGKPLEVAYAALFLLSDESSFITGQ--VLFVDGG 237 (245)
T ss_dssp --------------CHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------------CHHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHhCchhcCCcCC--EEEECCC
Confidence 0111122222211 12478999999999999976433 355 8988875
No 199
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.91 E-value=1.2e-23 Score=200.33 Aligned_cols=231 Identities=13% Similarity=0.060 Sum_probs=165.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++..... ..+..... ...+.++.++.+|++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---------------~~~~~~~~-~~~~~~~~~~~~Dl~ 85 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDH---------------VSTWLMHE-RDAGRDFKAYAVDVA 85 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHH---------------HHHHHHHH-HTTTCCCEEEECCTT
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHH---------------HHHHHHHH-HhcCCceEEEEecCC
Confidence 35789999999999999999999999999999988543321 01111111 122457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~isS~~ 164 (269)
T 3gk3_A 86 DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFG-RIVNIGSVN 164 (269)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEeCChh
Confidence 999988887754 7999999999765432 2335567788999999999999988753 4445 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 165 ~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---- 216 (269)
T 3gk3_A 165 GSR------------------------GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV---- 216 (269)
T ss_dssp HHH------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----
T ss_pred hcc------------------------CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh----
Confidence 442 22346899999999999999999885 89999999999988753210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
..... .. .+........+.+++|+|++++.++......-.++++++.++
T Consensus 217 ---------------~~~~~----~~----~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG 265 (269)
T 3gk3_A 217 ---------------PQDVL----EA----KILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG 265 (269)
T ss_dssp -------------------------C----CSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred ---------------chhHH----HH----HhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence 00000 00 011112334678999999999999886554322349999885
No 200
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.91 E-value=2.3e-23 Score=198.03 Aligned_cols=242 Identities=10% Similarity=0.019 Sum_probs=168.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcc-cCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS-LTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~Dl 161 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. ....++.++.+|+
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~~Dv 68 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERL----------------RAAESALRQRFPGARLFASVCDV 68 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHSTTCCEEEEECCT
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHhcCCceEEEEeCCC
Confidence 45789999999999999999999999999999999864321 122222222 2233589999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
+|.++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 69 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~ 147 (265)
T 3lf2_A 69 LDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA-AIVCVNSL 147 (265)
T ss_dssp TCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE-EEEEEEEG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe-EEEEECCc
Confidence 9999988887654 7999999999865432 2345667888999999999999998854 2334 89999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +......|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 148 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--- 200 (265)
T 3lf2_A 148 LASQ------------------------PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRR--- 200 (265)
T ss_dssp GGTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH---
T ss_pred ccCC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhh---
Confidence 5442 22346899999999999999999885 89999999999987631100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
.......+ .....+......... .....+..++|+|++++.++......-.++++++.++
T Consensus 201 ---~~~~~~~~---~~~~~~~~~~~~~~~-------~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 260 (265)
T 3lf2_A 201 ---FEAREERE---LDWAQWTAQLARNKQ-------IPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG 260 (265)
T ss_dssp ---HTC---------CHHHHHHHHHHHTT-------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred ---hhhhhhhc---cCHHHHHHHHhhccC-------CCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence 00000000 000111111111100 1234578999999999999975444323349999875
No 201
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.91 E-value=1.4e-23 Score=197.35 Aligned_cols=227 Identities=15% Similarity=0.133 Sum_probs=162.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... ..+..+.+.. .+.++.++.+|++|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~~-~~~~~~~~~~D~~~ 65 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQK---------------ANEVVDEIKK-LGSDAIAVRADVAN 65 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH---------------HHHHHHHHHh-cCCcEEEEEcCCCC
Confidence 4578999999999999999999999999999998732211 1111111211 13578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||...
T Consensus 66 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~ 144 (246)
T 2uvd_A 66 AEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHG-RIVNIASVVG 144 (246)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECCHHh
Confidence 99998888753 6999999999764322 233556778899999999888877664 34555 9999999654
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+.. ..+...|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 145 ~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----- 195 (246)
T 2uvd_A 145 VTG------------------------NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL----- 195 (246)
T ss_dssp HHC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-----
T ss_pred cCC------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-----
Confidence 321 1236789999999999999998874 89999999999987753210
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.. ..........+ ...+++++|+|++++.++..+.. .|+ ++++.++
T Consensus 196 -----------~~---~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~tG~--~~~vdgG 243 (246)
T 2uvd_A 196 -----------DE---NIKAEMLKLIP---------AAQFGEAQDIANAVTFFASDQSKYITGQ--TLNVDGG 243 (246)
T ss_dssp -----------CT---THHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -----------CH---HHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCCCCC--EEEECcC
Confidence 00 01111111111 23578999999999999975433 355 8998875
No 202
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.91 E-value=3.1e-23 Score=193.62 Aligned_cols=202 Identities=15% Similarity=0.133 Sum_probs=139.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+.+|+||||||+|+||++|+++|+++| ++|++++|..... ..+...++.++.+|+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-----------------------~~~~~~~~~~~~~Dl 76 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-----------------------HKPYPTNSQIIMGDV 76 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-----------------------CSSCCTTEEEEECCT
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-----------------------cccccCCcEEEEecC
Confidence 3457899999999999999999999999 8999999865421 111234789999999
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCC
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDI 241 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~ 241 (479)
+|+++++++++ ++|+|||||+... ....+.++++++++.+.+ +||++||.++|+......
T Consensus 77 ~d~~~~~~~~~--~~D~vv~~a~~~~-----------------~~~~~~~~~~~~~~~~~~-~iV~iSS~~~~~~~~~~~ 136 (236)
T 3qvo_A 77 LNHAALKQAMQ--GQDIVYANLTGED-----------------LDIQANSVIAAMKACDVK-RLIFVLSLGIYDEVPGKF 136 (236)
T ss_dssp TCHHHHHHHHT--TCSEEEEECCSTT-----------------HHHHHHHHHHHHHHTTCC-EEEEECCCCC--------
T ss_pred CCHHHHHHHhc--CCCEEEEcCCCCc-----------------hhHHHHHHHHHHHHcCCC-EEEEEecceecCCCCccc
Confidence 99999999999 8999999998411 123567899999999987 999999999987643211
Q ss_pred cCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcc
Q 011706 242 EEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVF 321 (479)
Q Consensus 242 ~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~ 321 (479)
.+. .......+...|..+|..+ +..|++++++|||.++++....
T Consensus 137 ~~~---------------~~~~~~~~~~~~~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~----------------- 180 (236)
T 3qvo_A 137 VEW---------------NNAVIGEPLKPFRRAADAI----EASGLEYTILRPAWLTDEDIID----------------- 180 (236)
T ss_dssp -----------------------CGGGHHHHHHHHHH----HTSCSEEEEEEECEEECCSCCC-----------------
T ss_pred ccc---------------hhhcccchHHHHHHHHHHH----HHCCCCEEEEeCCcccCCCCcc-----------------
Confidence 110 0001122333444455544 3569999999999999874321
Q ss_pred cchHHHHHHHHhcCCCeEEecCCCc-eeccccHHHHHHHHHHHHhCCC-CCCCceEEEeCCC
Q 011706 322 GTALNRFCVQAAVGHPLTVYGKGGQ-TRGYLDIRDTVQCVELAIANPA-QPGEFRVFNQFTE 381 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~a~~~~~~~~~-~~g~~~~~ni~~~ 381 (479)
......+.. ...+++++|+|++++.++.++. ..+ ++|++++.
T Consensus 181 ----------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g--~~~~i~~~ 224 (236)
T 3qvo_A 181 ----------------YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIG--ENIGINQP 224 (236)
T ss_dssp ----------------CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTT--EEEEEECS
T ss_pred ----------------eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccC--eeEEecCC
Confidence 011111111 2357999999999999999876 344 49999873
No 203
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.91 E-value=1e-23 Score=200.14 Aligned_cols=223 Identities=15% Similarity=0.114 Sum_probs=164.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+ ..++.++.+|++|
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~D~~~ 63 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL----------------AEAVAAL----EAEAIAVVADVSD 63 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHTC----CSSEEEEECCTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHh----cCceEEEEcCCCC
Confidence 5689999999999999999999999999999998864311 1111111 2468899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEeeccccccC
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKLGTMGEYGT 236 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~SS~~v~g~ 236 (479)
.++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++..... ..+||++||...++.
T Consensus 64 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 143 (263)
T 2a4k_A 64 PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA 143 (263)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC
Confidence 99998887753 6899999999765332 2335566788999999999999999976521 239999999766521
Q ss_pred CCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhc
Q 011706 237 PNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCN 313 (479)
Q Consensus 237 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~ 313 (479)
+ ....|+.||++.+.+++.++.++ |+++++++||.|.++....
T Consensus 144 ~-------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------- 189 (263)
T 2a4k_A 144 F-------------------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG--------- 189 (263)
T ss_dssp H-------------------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT---------
T ss_pred C-------------------------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh---------
Confidence 1 25789999999999999998875 8999999999998874321
Q ss_pred ccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 314 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 314 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.............+ ...+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 190 ----------~~~~~~~~~~~~~p---------~~~~~~p~dvA~~v~~l~s~~~~~~tG~--~i~vdgG 238 (263)
T 2a4k_A 190 ----------LPPWAWEQEVGASP---------LGRAGRPEEVAQAALFLLSEESAYITGQ--ALYVDGG 238 (263)
T ss_dssp ----------SCHHHHHHHHHTST---------TCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ----------cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCcCC--EEEECCC
Confidence 00112222222222 12478999999999999976433 354 8999875
No 204
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.91 E-value=4.8e-23 Score=198.90 Aligned_cols=231 Identities=15% Similarity=0.110 Sum_probs=169.4
Q ss_pred CCCCCCcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEE
Q 011706 81 NDPSKAKRVMIIGGDG--YCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYI 158 (479)
Q Consensus 81 ~~~~~~~~vLVtGatG--~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 158 (479)
...+++|+||||||+| +||.+++++|+++|++|++++|..... +.++...... .++.++.
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~-----------------~~~~~~~~~~-~~~~~~~ 86 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK-----------------KRVDPLAESL-GVKLTVP 86 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-----------------HHHHHHHHHH-TCCEEEE
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH-----------------HHHHHHHHhc-CCeEEEE
Confidence 3456899999999997 999999999999999999999864311 1111111111 3468899
Q ss_pred cccCChHHHHHHhhhc-----CCCEEEEcccccCc-----ccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEE
Q 011706 159 GDICDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVK 227 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~ 227 (479)
+|++|.++++++++.. ++|+||||||.... +....+.+++..++++|+.|+.++++++...- ...+||+
T Consensus 87 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~ 166 (296)
T 3k31_A 87 CDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILT 166 (296)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 9999999999888754 79999999998642 22334566788899999999999999997642 1249999
Q ss_pred eeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCc
Q 011706 228 LGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDE 304 (479)
Q Consensus 228 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~ 304 (479)
+||...+. +......|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 167 isS~~~~~------------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 222 (296)
T 3k31_A 167 LSYYGAEK------------------------VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG 222 (296)
T ss_dssp EECGGGTS------------------------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS
T ss_pred EEehhhcc------------------------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc
Confidence 99965542 22346889999999999999999885 8999999999999886432
Q ss_pred hhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.. .............+ ...+...+|+|++++.++..... .|+ ++++.++
T Consensus 223 ~~-----------------~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s~~a~~itG~--~i~vdGG 273 (296)
T 3k31_A 223 IS-----------------DFHYILTWNKYNSP---------LRRNTTLDDVGGAALYLLSDLGRGTTGE--TVHVDCG 273 (296)
T ss_dssp CH-----------------HHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred cc-----------------chHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCccCCccCC--EEEECCC
Confidence 10 01122222222222 23467899999999999986443 455 9999875
No 205
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.91 E-value=2.3e-23 Score=198.02 Aligned_cols=212 Identities=17% Similarity=0.103 Sum_probs=157.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|.... .......++.++.+|++|
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----------------------~~~~~~~~~~~~~~Dv~d 70 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-----------------------LKALNLPNTLCAQVDVTD 70 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH-----------------------HHTTCCTTEEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----------------------HHHhhcCCceEEEecCCC
Confidence 568999999999999999999999999999999985431 111122478899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++. +.+.+ +||++||...
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~IV~isS~~~ 149 (266)
T 3p19_A 71 KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG-TIINISSIAG 149 (266)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEcChhh
Confidence 99998888754 6999999999865432 233556778899999999999877764 45555 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +......|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 150 ~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---- 201 (266)
T 3p19_A 150 KK------------------------TFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT---- 201 (266)
T ss_dssp TS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS----
T ss_pred CC------------------------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc----
Confidence 42 22346899999999999999999884 899999999999887532100
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
............ .....+++++|+|++++.++.++..
T Consensus 202 -----------~~~~~~~~~~~~-----------~~~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 202 -----------SQQIKDGYDAWR-----------VDMGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp -----------CHHHHHHHHHHH-----------HHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred -----------chhhhHHHHhhc-----------ccccCCCCHHHHHHHHHHHHcCCCC
Confidence 000111111100 0123578999999999999998654
No 206
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.91 E-value=1.4e-23 Score=198.39 Aligned_cols=235 Identities=16% Similarity=0.082 Sum_probs=161.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~~~~ 64 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA----------------KAVASEINQ-AGGHAVAVKVDVSDRD 64 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTTSHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEEecCCCHH
Confidence 58999999999999999999999999999998864321 111111111 1346889999999999
Q ss_pred HHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cC-CcceEEEeeccccc
Q 011706 166 FLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FR-QECHLVKLGTMGEY 234 (479)
Q Consensus 166 ~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g-~~~~~V~~SS~~v~ 234 (479)
+++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+ .+ +||++||...+
T Consensus 65 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~ 143 (256)
T 1geg_A 65 QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGG-KIINACSQAGH 143 (256)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE-EEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC-EEEEECchhhc
Confidence 998888643 6999999999754322 2335567788999999999999887754 34 44 99999996543
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
. +......|+.||++.+.+++.++.++ |+++++++||.|.++..... ...+
T Consensus 144 ~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~ 197 (256)
T 1geg_A 144 V------------------------GNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI--DRQV 197 (256)
T ss_dssp S------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH--HHHH
T ss_pred C------------------------CCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhh--hhhc
Confidence 2 11236789999999999999998874 89999999999987631100 0000
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.... +.. .......+... .....+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 198 ~~~~---~~~---~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~--~i~vdGG 252 (256)
T 1geg_A 198 SEAA---GKP---LGYGTAEFAKR---------ITLGRLSEPEDVAACVSYLASPDSDYMTGQ--SLLIDGG 252 (256)
T ss_dssp HHHH---TCC---TTHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESSS
T ss_pred cccc---cCC---hHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccccCCCCC--EEEeCCC
Confidence 0000 000 00011111111 1123578999999999999876433 455 8998875
No 207
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.91 E-value=3.4e-23 Score=194.74 Aligned_cols=216 Identities=13% Similarity=0.097 Sum_probs=161.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+|+||++++++|+++|++|++++|..... +..... ..++.++.+|++|++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--------------------~~~~~~-~~~~~~~~~Dv~~~~ 60 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS--------------------ADFAKE-RPNLFYFHGDVADPL 60 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH--------------------HHHHTT-CTTEEEEECCTTSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--------------------HHHHHh-cccCCeEEeeCCCHH
Confidence 68999999999999999999999999999999864321 111111 135678999999999
Q ss_pred HHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccccccC
Q 011706 166 FLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMGEYGT 236 (479)
Q Consensus 166 ~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~v~g~ 236 (479)
+++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++... +.+ +||++||...+.
T Consensus 61 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g-~iv~isS~~~~~- 138 (247)
T 3dii_A 61 TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG-RIINIASTRAFQ- 138 (247)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-EEEEECCGGGTS-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-EEEEEcchhhcC-
Confidence 998888753 7999999999765432 23355677889999999999999988653 233 999999976553
Q ss_pred CCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC--CceEEeecCeeecCCCCchhhhHhhhcc
Q 011706 237 PNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVRTDETAMHEELCNR 314 (479)
Q Consensus 237 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ivRp~~v~Gp~~~~~~~~~~~~~~ 314 (479)
+......|+.||++.+.+++.++.+++ ++++++.||.|..+....
T Consensus 139 -----------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~---------- 185 (247)
T 3dii_A 139 -----------------------SEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE---------- 185 (247)
T ss_dssp -----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-------------
T ss_pred -----------------------CCCCcHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEEeCccCCcchhh----------
Confidence 223467899999999999999999874 899999999998764321
Q ss_pred cCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 315 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
+....... .....+..++|+|++++.++......|+ ++++.++
T Consensus 186 -------------~~~~~~~~---------~p~~r~~~p~dva~~v~~l~~~~~itG~--~i~vdGG 228 (247)
T 3dii_A 186 -------------FTQEDCAA---------IPAGKVGTPKDISNMVLFLCQQDFITGE--TIIVDGG 228 (247)
T ss_dssp -------------CCHHHHHT---------STTSSCBCHHHHHHHHHHHHTCSSCCSC--EEEESTT
T ss_pred -------------HHHHHHhc---------CCCCCCcCHHHHHHHHHHHHcCCCCCCc--EEEECCC
Confidence 00111111 1223568899999999999966555666 9999775
No 208
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.91 E-value=9.3e-23 Score=196.06 Aligned_cols=259 Identities=12% Similarity=0.031 Sum_probs=171.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++............-.......+.+..+.+. ..+.++.++.+|++
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK-GHNRRIVTAEVDVR 86 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH-TTTCCEEEEECCTT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHh-hcCCceEEEEcCCC
Confidence 45789999999999999999999999999999999863221110000000000111112222222 22457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcc--cccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAP--YSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~ 231 (479)
|+++++++++.. ++|+||||||..... ....+.+++.+++++|+.|+.++++++... +...+||++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 999998887643 799999999976543 233456678889999999999999987542 322399999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +......|+.||++.+.+++.++.+ +|+++++++||.|..+........
T Consensus 167 ~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~ 222 (286)
T 3uve_A 167 GGLK------------------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF 222 (286)
T ss_dssp GGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHH
T ss_pred hhcc------------------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchh
Confidence 5542 2234688999999999999999988 489999999999998865432110
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..+..... .............. .... ..+.+++|+|++++.++..... .|+ ++++.++
T Consensus 223 ~~~~~~~~-----~~~~~~~~~~~~~~-------~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~--~i~vdGG 282 (286)
T 3uve_A 223 KMFRPDLE-----NPGPDDMAPICQMF-------HTLP-IPWVEPIDISNAVLFFASDEARYITGV--TLPIDAG 282 (286)
T ss_dssp HHHCTTSS-----SCCHHHHHHHHHTT-------CSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred hhcccccc-----ccchhhHHHHHHhh-------hccC-CCcCCHHHHHHHHHHHcCccccCCcCC--EEeECCc
Confidence 00000000 00000000000011 1112 4678999999999999976543 355 9999875
No 209
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.91 E-value=1.6e-23 Score=201.62 Aligned_cols=233 Identities=12% Similarity=0.072 Sum_probs=164.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~ 93 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELV----------------DRGMAAYKA-AGINAHGYVCDVT 93 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHHH-TTCCCEEEECCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCeEEEEEecCC
Confidence 35789999999999999999999999999999998864311 111111211 1346889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 94 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iV~isS~~ 172 (291)
T 3cxt_A 94 DEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHG-KIINICSMM 172 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECccc
Confidence 999998888742 5999999999764322 2335567788999999999999888743 4555 999999964
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++.......
T Consensus 173 ~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-- 226 (291)
T 3cxt_A 173 SEL------------------------GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRE-- 226 (291)
T ss_dssp GTC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-------
T ss_pred ccc------------------------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCcCcchhhhcc--
Confidence 331 12336799999999999999998875 8999999999999885321000
Q ss_pred hhhcccCCCCcccchHHH--HHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNR--FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. ...... +........ ....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 227 --------~---~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~l~s~~~~~itG~--~i~vdGG 280 (291)
T 3cxt_A 227 --------L---QKDGSRHPFDQFIIAKT---------PAARWGEAEDLMGPAVFLASDASNFVNGH--ILYVDGG 280 (291)
T ss_dssp ------------------CHHHHHHHHHC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------c---hhhhhhhhHHhhhhccC---------CCCCCCCHHHHHHHHHHHhCccccCCcCC--eEEECCC
Confidence 0 000000 111000011 122478999999999999876433 355 8998875
No 210
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.91 E-value=2.7e-23 Score=197.72 Aligned_cols=228 Identities=13% Similarity=0.063 Sum_probs=167.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~---------------~~~~~~~l~~-~~~~~~~~~~Dl~ 86 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAG---------------AQETLNAIVA-NGGNGRLLSFDVA 86 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTCCEEEEECCTT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHH---------------HHHHHHHHHh-cCCceEEEEecCC
Confidence 45688999999999999999999999999998776543211 1112222221 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH-----HcCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK-----EFRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~-----~~g~~~~~V~~SS~ 231 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 87 ~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g-~iv~isS~ 165 (267)
T 4iiu_A 87 NREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGG-RIITLSSV 165 (267)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE-EEEEECCH
T ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc-EEEEEcch
Confidence 999988887753 7999999999865432 233566778899999999999999874 34444 99999995
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 166 ~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--- 218 (267)
T 4iiu_A 166 SGVM------------------------GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--- 218 (267)
T ss_dssp HHHH------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---
T ss_pred Hhcc------------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---
Confidence 4432 12346899999999999999999885 89999999999998864321
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
...........+ ...+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 219 -----------------~~~~~~~~~~~p---------~~~~~~~edva~~~~~L~s~~~~~itG~--~i~vdGG~ 266 (267)
T 4iiu_A 219 -----------------ESALKEAMSMIP---------MKRMGQAEEVAGLASYLMSDIAGYVTRQ--VISINGGM 266 (267)
T ss_dssp -----------------HHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTC
T ss_pred -----------------HHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCCcccCccCC--EEEeCCCc
Confidence 222333333322 23578899999999999976443 455 99998753
No 211
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.91 E-value=4.6e-23 Score=190.60 Aligned_cols=224 Identities=14% Similarity=0.052 Sum_probs=166.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
++||++|||||+++||++++++|+++|++|++++|..... ......++..+.+|++|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~-----------------------~~~~~~~~~~~~~Dv~~ 65 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV-----------------------HAPRHPRIRREELDITD 65 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST-----------------------TSCCCTTEEEEECCTTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----------------------hhhhcCCeEEEEecCCC
Confidence 5799999999999999999999999999999999854321 11123578899999999
Q ss_pred hHHHHHHhhhc-CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccccccCCCC
Q 011706 164 FEFLSESFKSF-EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 164 ~~~~~~~~~~~-~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~v~g~~~~ 239 (479)
+++++++++.+ ++|++|||||+.. +....+.++|++++++|+.|++.+.+++..+ +.+ +||++||..-..
T Consensus 66 ~~~v~~~~~~~g~iDiLVNNAGi~~-~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G-~IVnisS~~~~~---- 139 (242)
T 4b79_A 66 SQRLQRLFEALPRLDVLVNNAGISR-DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGG-SILNIASMYSTF---- 139 (242)
T ss_dssp HHHHHHHHHHCSCCSEEEECCCCCC-GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCE-EEEEECCGGGTS----
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCC-CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-eEEEEeeccccC----
Confidence 99999999876 5999999999765 3445567789999999999999998877432 224 999999954321
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhcccC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCNRLD 316 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~ 316 (479)
+......|+.||++...+.+.++.++ ||+++.|-||.|.-|......
T Consensus 140 --------------------~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~---------- 189 (242)
T 4b79_A 140 --------------------GSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK---------- 189 (242)
T ss_dssp --------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C----------
T ss_pred --------------------CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc----------
Confidence 12236789999999999999999985 899999999999766422100
Q ss_pred CCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCC
Q 011706 317 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQ 382 (479)
Q Consensus 317 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~ 382 (479)
. -......+....|+ .-+...+|+|.+++.++......-.++++.+.++.
T Consensus 190 -----~--~~~~~~~~~~~~Pl---------gR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~ 239 (242)
T 4b79_A 190 -----A--DVEATRRIMQRTPL---------ARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGY 239 (242)
T ss_dssp -----C--CHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred -----C--CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCccCceEEECccH
Confidence 0 01223333333332 24567899999999998655443223488887753
No 212
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.91 E-value=7.6e-24 Score=200.25 Aligned_cols=229 Identities=13% Similarity=0.074 Sum_probs=164.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..++|+||||||+|+||.+++++|+++|++|+++++..... ..+..+.... .+.++.++.+|++
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~Dv~ 73 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPR---------------RVKWLEDQKA-LGFDFYASEGNVG 73 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSS---------------HHHHHHHHHH-TTCCCEEEECCTT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHH---------------HHHHHHHHHh-cCCeeEEEecCCC
Confidence 45789999999999999999999999999999988533211 1111112211 2357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++ ++.+.+ +||++||..
T Consensus 74 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~ 152 (256)
T 3ezl_A 74 DWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG-RIINISSVN 152 (256)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEEcchh
Confidence 999998888754 6899999999765332 23355677889999999998887776 344555 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.+ .|+++++++||.|..+....
T Consensus 153 ~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----- 203 (256)
T 3ezl_A 153 GQK------------------------GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA----- 203 (256)
T ss_dssp GGG------------------------SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-----
T ss_pred hcc------------------------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-----
Confidence 442 2234689999999999999999988 48999999999997763210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
........+.... ....+.+++|+|++++.++..... .|+ ++++.++.
T Consensus 204 --------------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~tG~--~i~vdgG~ 253 (256)
T 3ezl_A 204 --------------IRPDVLEKIVATI---------PVRRLGSPDEIGSIVAWLASEESGFSTGA--DFSLNGGL 253 (256)
T ss_dssp --------------SCHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTS
T ss_pred --------------cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCcccCCcCc--EEEECCCE
Confidence 1122233332222 223577899999999999865433 455 99998753
No 213
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.91 E-value=3.2e-23 Score=202.09 Aligned_cols=255 Identities=15% Similarity=0.094 Sum_probs=169.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCC-ccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLT-PIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++....... .... ....+.+..+.+. ..+.++.++.+|+
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv 116 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNL-----DYAQGSPEELKETVRLVE-EQGRRIIARQADV 116 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTC-----CSCCCCHHHHHHHHHHHH-HTTCCEEEEECCT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccc-----cccccCHHHHHHHHHHHH-hcCCeEEEEECCC
Confidence 4578999999999999999999999999999999875321100 0000 0011112222222 1246789999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
+|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+...+||++||.
T Consensus 117 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~ 196 (317)
T 3oec_A 117 RDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST 196 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcH
Confidence 9999998888754 7999999999865432 2335567888999999999999998844 3322489999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +......|+.||++.+.+++.++.++ |+++++++||.|.++........
T Consensus 197 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~ 252 (317)
T 3oec_A 197 VGLR------------------------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLL 252 (317)
T ss_dssp GGSS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHH
T ss_pred HhcC------------------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhh
Confidence 5442 22346899999999999999999985 89999999999988742111000
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
..+.... . ...... ........ . .....|++++|+|++++.++..... .|+ ++++.++.
T Consensus 253 ~~~~~~~--~---~~~~~~-~~~~~~~~------~-~~p~~~~~pedvA~av~fL~s~~a~~itG~--~i~vdGG~ 313 (317)
T 3oec_A 253 KMFLPHL--E---NPTRED-AAELFSQL------T-LLPIPWVEPEDVSNAVAWLASDEARYIHGA--AIPVDGGQ 313 (317)
T ss_dssp HHHCTTC--S---SCCHHH-HHHHHTTT------C-SSSSSSBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTTG
T ss_pred hhhhhhc--c---ccchhH-HHHHHhhh------c-cCCCCCCCHHHHHHHHHHHcCCcccCCCCC--EEEECcch
Confidence 0000000 0 000000 01111110 0 1115789999999999998865443 455 99998753
No 214
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.91 E-value=5.4e-24 Score=201.93 Aligned_cols=234 Identities=12% Similarity=0.004 Sum_probs=161.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++..+.... +.+..+.+.. .+.++.++.+|++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~Dv~ 73 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDT-------------ANKLKDELED-QGAKVALYQSDLS 73 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHH-------------HHHHHHHHHT-TTCEEEEEECCCC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHH-------------HHHHHHHHHh-cCCcEEEEECCCC
Confidence 4678999999999999999999999999999999875432110 1111222221 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc--CCcceEEEeeccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF--RQECHLVKLGTMGEY 234 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--g~~~~~V~~SS~~v~ 234 (479)
|.++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++... +.+ +||++||...+
T Consensus 74 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g-~iv~isS~~~~ 152 (262)
T 3ksu_A 74 NEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNG-HIITIATSLLA 152 (262)
T ss_dssp SHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEE-EEEEECCCHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-EEEEEechhhc
Confidence 999998888753 6999999999765433 23356678889999999999999999874 333 89999996554
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
... .....|+.||++.+.+++.++.++ |++++++.||.|..+..
T Consensus 153 ~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--------- 199 (262)
T 3ksu_A 153 AYT------------------------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF--------- 199 (262)
T ss_dssp HHH------------------------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH---------
T ss_pred cCC------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc---------
Confidence 321 225689999999999999999986 79999999999865421
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCc
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQF 383 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~ 383 (479)
...........+........+..++|+|++++.++.. ...-.++++++.|+..
T Consensus 200 ------------------~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~ 252 (262)
T 3ksu_A 200 ------------------YGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYT 252 (262)
T ss_dssp ------------------HTCC------------CCCCSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCC
T ss_pred ------------------cccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCcc
Confidence 0000000111111222334678999999999999986 3322234999988643
No 215
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.91 E-value=2.6e-23 Score=195.73 Aligned_cols=219 Identities=15% Similarity=0.080 Sum_probs=158.0
Q ss_pred CCCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 81 NDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 81 ~~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
...+++|+||||||+|+||.+++++|+++|++|++++|... ..+.+ ..+.++ +|
T Consensus 14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~~~~~-----~~~~~~-~D 67 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE--------------------LLKRS-----GHRYVV-CD 67 (249)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH--------------------HHHHT-----CSEEEE-CC
T ss_pred HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH--------------------HHHhh-----CCeEEE-ee
Confidence 34568999999999999999999999999999999988531 11111 246667 99
Q ss_pred cCChHHHHHHhhhc-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccccc
Q 011706 161 ICDFEFLSESFKSF-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGEY 234 (479)
Q Consensus 161 l~d~~~~~~~~~~~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v~ 234 (479)
+ .++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++.+++ ++.+.+ +||++||...+
T Consensus 68 ~--~~~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~ 144 (249)
T 1o5i_A 68 L--RKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG-RIVAITSFSVI 144 (249)
T ss_dssp T--TTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGT
T ss_pred H--HHHHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEEcchHhc
Confidence 9 45566666544 7999999999754332 23355677889999999988776554 455666 99999998766
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
.. ..+...|+.+|++.+.+++.++.+ .|+++++++||.|+++....
T Consensus 145 ~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------- 193 (249)
T 1o5i_A 145 SP------------------------IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE------- 193 (249)
T ss_dssp SC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-------
T ss_pred CC------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-------
Confidence 42 233689999999999999999887 48999999999999885210
Q ss_pred hcccCCCCcccchHHHHHH-HHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 312 CNRLDYDGVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
....... ...... ....+.+++|+|++++.++..+.. .|+ +|++.++.
T Consensus 194 ------------~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~i~~l~s~~~~~~tG~--~~~vdgG~ 244 (249)
T 1o5i_A 194 ------------LLSEEKKKQVESQI---------PMRRMAKPEEIASVVAFLCSEKASYLTGQ--TIVVDGGL 244 (249)
T ss_dssp ------------HSCHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTTC
T ss_pred ------------cchhhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCCCCC--EEEECCCc
Confidence 0001111 122211 124578999999999999875433 355 99998753
No 216
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.91 E-value=9.2e-24 Score=199.84 Aligned_cols=224 Identities=15% Similarity=0.105 Sum_probs=162.5
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+.+++|++|||||+|+||.+++++|+++|++|++++|.... ..+. .+.++.++.+|+
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-------------------~~~~----~~~~~~~~~~D~ 61 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED-------------------VVAD----LGDRARFAAADV 61 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH-------------------HHHH----TCTTEEEEECCT
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH-------------------HHHh----cCCceEEEECCC
Confidence 34678999999999999999999999999999999874321 1111 135789999999
Q ss_pred CChHHHHHHhhhc----CCCEEEEcccccCcccc-----cccccccchhhhhhHHHHHHHHHHHHHc-----------CC
Q 011706 162 CDFEFLSESFKSF----EPDAVVHFGEQRSAPYS-----MIDRSRAVFTQHNNVIGTLNVLFAMKEF-----------RQ 221 (479)
Q Consensus 162 ~d~~~~~~~~~~~----~~D~Vih~A~~~~~~~~-----~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-----------g~ 221 (479)
+|.++++++++.. ++|+||||||....... ..+++++.+++++|+.|+.++++++... +.
T Consensus 62 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~ 141 (257)
T 3tl3_A 62 TDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEE 141 (257)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCC
Confidence 9999998887643 79999999997542211 1355667889999999999999988653 22
Q ss_pred cceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeee
Q 011706 222 ECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVY 298 (479)
Q Consensus 222 ~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~ 298 (479)
..+||++||...+. +..+...|+.||++.+.+++.++.++ |+++++++||.|.
T Consensus 142 ~g~iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 197 (257)
T 3tl3_A 142 RGVIINTASVAAFD------------------------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFD 197 (257)
T ss_dssp SEEEEEECCCC--C------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred CcEEEEEcchhhcC------------------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCcc
Confidence 23899999965442 11235789999999999999999884 7999999999998
Q ss_pred cCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEe
Q 011706 299 GVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQ 378 (479)
Q Consensus 299 Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni 378 (479)
.+.... .............+. ...+.+++|+|++++.++..+...|+ ++++
T Consensus 198 T~~~~~-------------------~~~~~~~~~~~~~~~--------~~r~~~p~dva~~v~~l~s~~~itG~--~i~v 248 (257)
T 3tl3_A 198 TPLLAS-------------------LPEEARASLGKQVPH--------PSRLGNPDEYGALAVHIIENPMLNGE--VIRL 248 (257)
T ss_dssp CTTC----------------------CHHHHHHHHHTSSS--------SCSCBCHHHHHHHHHHHHHCTTCCSC--EEEE
T ss_pred Chhhhh-------------------ccHHHHHHHHhcCCC--------CCCccCHHHHHHHHHHHhcCCCCCCC--EEEE
Confidence 875321 011222222222111 13578999999999999988666676 9999
Q ss_pred CCC
Q 011706 379 FTE 381 (479)
Q Consensus 379 ~~~ 381 (479)
.++
T Consensus 249 dGG 251 (257)
T 3tl3_A 249 DGA 251 (257)
T ss_dssp STT
T ss_pred CCC
Confidence 875
No 217
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.91 E-value=8.4e-24 Score=198.88 Aligned_cols=216 Identities=15% Similarity=0.112 Sum_probs=156.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... ..+..+.+|++
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~~~~D~~ 63 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------------KGLFGVEVDVT 63 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------TTSEEEECCTT
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------------------------HHhcCeeccCC
Confidence 45789999999999999999999999999999998853210 11123789999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 64 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~ 142 (247)
T 1uzm_A 64 DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG-RMIFIGSVS 142 (247)
T ss_dssp CHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-EEEEECCHh
Confidence 999998887643 6899999999754322 2335567788999999999999998854 4555 999999964
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++....
T Consensus 143 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----- 193 (247)
T 1uzm_A 143 GLW------------------------GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA----- 193 (247)
T ss_dssp C-----------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----
T ss_pred hcc------------------------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-----
Confidence 331 11236789999999999999999874 8999999999997652100
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
............. ....+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 194 --------------~~~~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~~~~G~--~i~vdgG 242 (247)
T 1uzm_A 194 --------------LDERIQQGALQFI---------PAKRVGTPAEVAGVVSFLASEDASYISGA--VIPVDGG 242 (247)
T ss_dssp --------------SCHHHHHHHGGGC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------------cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCCcCC--EEEECCC
Confidence 0011111111111 123578999999999999975433 454 9999875
No 218
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.91 E-value=1.8e-23 Score=200.66 Aligned_cols=240 Identities=14% Similarity=0.053 Sum_probs=166.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... ..+..+.+.. .+.++.++.+|++
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~~-~~~~~~~~~~D~~ 89 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES---------------AEEVVAAIKK-NGSDAACVKANVG 89 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH---------------HHHHHHHHHH-hCCCeEEEEcCCC
Confidence 45789999999999999999999999999999998864311 0011111111 2357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc--CCcceEEEeeccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF--RQECHLVKLGTMGEY 234 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--g~~~~~V~~SS~~v~ 234 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... +.+ +||++||...+
T Consensus 90 ~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g-~iv~isS~~~~ 168 (283)
T 1g0o_A 90 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG-RLILMGSITGQ 168 (283)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC-EEEEECCGGGT
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCC-eEEEEechhhc
Confidence 999888877643 6999999999764322 22355677889999999999999999876 444 99999996543
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
... ..+...|+.||++.+.+++.++.++ |+++++++||.|.++.... .
T Consensus 169 ~~~-----------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~ 219 (283)
T 1g0o_A 169 AKA-----------------------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA------V 219 (283)
T ss_dssp CSS-----------------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH------H
T ss_pred cCC-----------------------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhh------h
Confidence 211 1126789999999999999999874 8999999999998763110 0
Q ss_pred hcccCCCCcccchHHHHHHHHhc--CCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAV--GHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.....+.+. ..-......+.. .. ....+.+.+|+|++++.++..... .|+ ++++.++
T Consensus 220 ~~~~~~~~~--~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~l~s~~~~~itG~--~i~vdgG 280 (283)
T 1g0o_A 220 CREYIPNGE--NLSNEEVDEYAAVQWS---------PLRRVGLPIDIARVVCFLASNDGGWVTGK--VIGIDGG 280 (283)
T ss_dssp GGGGSTTCT--TCCHHHHHHHHHHHSC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred hhhcccccc--ccCHHHHHHHHhhcCC---------CCCCCcCHHHHHHHHHHHhCccccCcCCC--EEEeCCC
Confidence 000000000 000111111211 11 123578999999999999976433 454 8998875
No 219
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.91 E-value=2.2e-23 Score=195.98 Aligned_cols=216 Identities=10% Similarity=0.047 Sum_probs=154.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
++|+||||||+|+||.+++++|+++| ++|++++|..... +.+ .++.+.++.++.+|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~-----------------~~l---~~~~~~~~~~~~~D~~ 61 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-----------------TEL---KSIKDSRVHVLPLTVT 61 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-----------------HHH---HTCCCTTEEEEECCTT
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH-----------------HHH---HhccCCceEEEEeecC
Confidence 47899999999999999999999999 9999999864321 011 1112457899999999
Q ss_pred ChHHHHHHhhhc-------CCCEEEEcccccC-ccc-ccccccccchhhhhhHHHHHHHHHHHHHc----------C---
Q 011706 163 DFEFLSESFKSF-------EPDAVVHFGEQRS-APY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----------R--- 220 (479)
Q Consensus 163 d~~~~~~~~~~~-------~~D~Vih~A~~~~-~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----------g--- 220 (479)
|.++++++++.. ++|+||||||... ... ...+.+++..++++|+.|+.++++++... +
T Consensus 62 ~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 141 (250)
T 1yo6_A 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLS 141 (250)
T ss_dssp CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCccc
Confidence 999998888743 7999999999765 221 22344567788999999999999887543 3
Q ss_pred --CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecC
Q 011706 221 --QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG 295 (479)
Q Consensus 221 --~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~ 295 (479)
.+ +||++||...+..... +. .+..+...|+.+|++.+.+++.++.++ |+++++++||
T Consensus 142 ~~~~-~iv~isS~~~~~~~~~---~~--------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg 203 (250)
T 1yo6_A 142 VSRA-AVITISSGLGSITDNT---SG--------------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPG 203 (250)
T ss_dssp TTTC-EEEEECCGGGCSTTCC---ST--------------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECC
T ss_pred CCCc-EEEEeccCccccCCcc---cc--------------cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCC
Confidence 44 9999999755432210 00 122457899999999999999999886 8999999999
Q ss_pred eeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCc
Q 011706 296 VVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEF 373 (479)
Q Consensus 296 ~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~ 373 (479)
.|.++... . ..+++.+|+|++++.++..... .|+
T Consensus 204 ~v~t~~~~-----------------------~--------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~- 239 (250)
T 1yo6_A 204 WVQTNLGG-----------------------K--------------------NAALTVEQSTAELISSFNKLDNSHNGR- 239 (250)
T ss_dssp CC--------------------------------------------------------HHHHHHHHHHHTTCCGGGTTC-
T ss_pred ceecCCCC-----------------------C--------------------CCCCCHHHHHHHHHHHHhcccccCCCe-
Confidence 98776310 0 1357899999999999987653 344
Q ss_pred eEEEeCCCCc
Q 011706 374 RVFNQFTEQF 383 (479)
Q Consensus 374 ~~~ni~~~~~ 383 (479)
.+.+.++.+
T Consensus 240 -~~~~~g~~~ 248 (250)
T 1yo6_A 240 -FFMRNLKPY 248 (250)
T ss_dssp -EEETTEEEC
T ss_pred -EEEECCcCC
Confidence 666554433
No 220
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.91 E-value=8.3e-23 Score=194.24 Aligned_cols=230 Identities=12% Similarity=0.145 Sum_probs=168.2
Q ss_pred CCCCcEEEEEcCCch--hhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhc-ccCCCceeEEEc
Q 011706 83 PSKAKRVMIIGGDGY--CGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK-SLTGKNIELYIG 159 (479)
Q Consensus 83 ~~~~~~vLVtGatG~--iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~ 159 (479)
.+++|+||||||+|+ ||.+++++|+++|++|++++|..+.. +...... .....++.++.+
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-----------------KSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-----------------HHHHHHHHTSSSCCCEEEEC
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH-----------------HHHHHHHHhcCCCCceEEeC
Confidence 457899999999987 99999999999999999998764311 1122221 222237899999
Q ss_pred ccCChHHHHHHhhhc-----CCCEEEEcccccCc-----ccccccccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEe
Q 011706 160 DICDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKL 228 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~ 228 (479)
|++|.++++++++.. ++|+||||||.... .....+.+++..++++|+.|+.++++++...-. +.+||++
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 999999998888754 79999999997641 223345566788899999999999999976521 2489999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...+. +......|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 147 sS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 202 (266)
T 3oig_A 147 TYLGGEL------------------------VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI 202 (266)
T ss_dssp ECGGGTS------------------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC
T ss_pred ecccccc------------------------cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc
Confidence 9965442 22346899999999999999999885 79999999999987643211
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.....+...+....+ ...+.+++|+|++++.++..... .|+ ++++.++
T Consensus 203 -----------------~~~~~~~~~~~~~~~---------~~~~~~p~dva~~v~~l~s~~~~~~tG~--~i~vdGG 252 (266)
T 3oig_A 203 -----------------SDFNSILKDIEERAP---------LRRTTTPEEVGDTAAFLFSDMSRGITGE--NLHVDSG 252 (266)
T ss_dssp -----------------TTHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -----------------cchHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCchhcCcCC--EEEECCC
Confidence 001122222222211 23568899999999999986443 455 9999875
No 221
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.91 E-value=4e-23 Score=198.00 Aligned_cols=235 Identities=14% Similarity=0.109 Sum_probs=165.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCC---ceeEEEcc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGK---NIELYIGD 160 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~D 160 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+... +. ++.++.+|
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~-~~~~~~~~~~~~D 66 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERL----------------EETRQIILKS-GVSEKQVNSVVAD 66 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHTT-TCCGGGEEEEECC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHc-CCCCcceEEEEec
Confidence 5689999999999999999999999999999999864321 1111111111 22 68899999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCccc-----ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEE
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-----SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLV 226 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-----~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V 226 (479)
++|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... + + +||
T Consensus 67 v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g-~iv 144 (280)
T 1xkq_A 67 VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G-EIV 144 (280)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C-EEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C-cEE
Confidence 99999988887643 6999999999764322 23355667889999999999999988643 3 4 999
Q ss_pred EeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCC
Q 011706 227 KLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTD 303 (479)
Q Consensus 227 ~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~ 303 (479)
++||...+... ..+...|+.||++.+.+++.++.+ +|+++++++||.|+++...
T Consensus 145 ~isS~~~~~~~-----------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 201 (280)
T 1xkq_A 145 NVSSIVAGPQA-----------------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTN 201 (280)
T ss_dssp EECCGGGSSSC-----------------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHH
T ss_pred EecCccccCCC-----------------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccc
Confidence 99997655321 023678999999999999999876 4899999999999987421
Q ss_pred chhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC---CCCCCceEEEeCC
Q 011706 304 ETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP---AQPGEFRVFNQFT 380 (479)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~~g~~~~~ni~~ 380 (479)
....... .......+....... .....+.+++|+|++++.++..+ ...|+ ++++.+
T Consensus 202 ~~~~~~~----------~~~~~~~~~~~~~~~---------~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~--~i~vdg 260 (280)
T 1xkq_A 202 AMGMPDQ----------ASQKFYNFMASHKEC---------IPIGAAGKPEHIANIILFLADRNLSFYILGQ--SIVADG 260 (280)
T ss_dssp HTTCCHH----------HHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSC--EEEEST
T ss_pred ccccccc----------cccchHHHHHHHHcC---------CCCCCCCCHHHHHHHHHHhcCcccccCccCC--eEEECC
Confidence 1000000 000001122222111 12235789999999999998654 23455 999987
Q ss_pred C
Q 011706 381 E 381 (479)
Q Consensus 381 ~ 381 (479)
+
T Consensus 261 G 261 (280)
T 1xkq_A 261 G 261 (280)
T ss_dssp T
T ss_pred C
Confidence 6
No 222
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.91 E-value=2e-23 Score=198.94 Aligned_cols=240 Identities=13% Similarity=0.119 Sum_probs=169.0
Q ss_pred CCCCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEc
Q 011706 82 DPSKAKRVMIIGGD--GYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIG 159 (479)
Q Consensus 82 ~~~~~~~vLVtGat--G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 159 (479)
...++|+||||||+ |+||.+++++|+++|++|++++|..+. .+.++.+.... .++.++.+
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~~~~-~~~~~~~~ 71 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-----------------KDRITEFAAEF-GSELVFPC 71 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-----------------HHHHHHHHHHT-TCCCEEEC
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-----------------HHHHHHHHHHc-CCcEEEEC
Confidence 35679999999999 999999999999999999999886331 11222221111 35889999
Q ss_pred ccCChHHHHHHhhhc-----CCCEEEEcccccCc-----cccc-ccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEE
Q 011706 160 DICDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSM-IDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVK 227 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~-~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~ 227 (479)
|++|.++++++++.. ++|+||||||.... .... .+.+++..++++|+.|+.++++++...- ...+||+
T Consensus 72 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 151 (271)
T 3ek2_A 72 DVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLT 151 (271)
T ss_dssp CTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEE
Confidence 999999999888754 68999999997643 1112 3555678899999999999999997642 1238999
Q ss_pred eeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCc
Q 011706 228 LGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDE 304 (479)
Q Consensus 228 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~ 304 (479)
+||...+. +......|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 152 isS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 207 (271)
T 3ek2_A 152 LSYLGAER------------------------AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG 207 (271)
T ss_dssp EECGGGTS------------------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC
T ss_pred Eecccccc------------------------CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc
Confidence 99965542 22346899999999999999999875 8999999999998875432
Q ss_pred hhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC-Cc
Q 011706 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE-QF 383 (479)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~-~~ 383 (479)
.. ....+........ ....+..++|+|++++.++......-.++++++.++ ..
T Consensus 208 ~~-----------------~~~~~~~~~~~~~---------~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 261 (271)
T 3ek2_A 208 IK-----------------SFGKILDFVESNS---------PLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNA 261 (271)
T ss_dssp CH-----------------HHHHHHHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGG
T ss_pred cc-----------------chHHHHHHHHhcC---------CcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeee
Confidence 10 0122223222222 223567899999999999986443322349999985 35
Q ss_pred CHHHHH
Q 011706 384 SVNQLA 389 (479)
Q Consensus 384 s~~el~ 389 (479)
++.++.
T Consensus 262 ~~~~~~ 267 (271)
T 3ek2_A 262 VVGGMA 267 (271)
T ss_dssp BCCCC-
T ss_pred ehhhhh
Confidence 544443
No 223
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.91 E-value=5.8e-23 Score=198.69 Aligned_cols=255 Identities=14% Similarity=0.085 Sum_probs=171.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++........ .. ......+.+..+.+.. .+.++.++.+|++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVK-LP---MSTPDDLAETVRQVEA-LGRRIIASQVDVR 99 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCC-SC---CCCHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeccccccccc-cc---ccCHHHHHHHHHHHHh-cCCceEEEECCCC
Confidence 46789999999999999999999999999999999863211000 00 0001112222222222 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcc--cccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAP--YSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~ 231 (479)
|.++++++++.. ++|+||||||..... ....+++++..++++|+.|+.++++++... +...+||++||.
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~ 179 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI 179 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence 999998888643 799999999976543 233466778899999999999999987543 322399999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +......|+.||++.+.+++.++.++ |+++++++||.|..+........
T Consensus 180 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~ 235 (299)
T 3t7c_A 180 GGLR------------------------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTY 235 (299)
T ss_dssp GGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH
T ss_pred hhcc------------------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchh
Confidence 5542 22346899999999999999999986 89999999999998864321100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..+.... . ......+....... .... ..+..++|+|++++.++..... .|+ ++++.++
T Consensus 236 ~~~~~~~--~---~~~~~~~~~~~~~~-------~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~--~i~vdGG 295 (299)
T 3t7c_A 236 RMFRPDL--E---NPTVEDFQVASRQM-------HVLP-IPYVEPADISNAILFLVSDDARYITGV--SLPVDGG 295 (299)
T ss_dssp HHHCTTS--S---SCCHHHHHHHHHHH-------SSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred hhhhhhh--c---cchhhHHHHHhhhh-------cccC-cCCCCHHHHHHHHHHHhCcccccCcCC--EEeeCCC
Confidence 0000000 0 00001110000000 0011 3578999999999999976543 355 9999875
No 224
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.91 E-value=5.8e-23 Score=192.70 Aligned_cols=205 Identities=17% Similarity=0.140 Sum_probs=155.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEE
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY-------EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYI 158 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~-------~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 158 (479)
+|+||||||+|+||.+++++|+++|+ +|++++|..... .+..+.+. ..+.++.++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~----------------~~~~~~~~-~~~~~~~~~~ 64 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL----------------EKISLECR-AEGALTDTIT 64 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH----------------HHHHHHHH-TTTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHH----------------HHHHHHHH-ccCCeeeEEE
Confidence 68999999999999999999999999 999998854311 11111111 1235788999
Q ss_pred cccCChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEe
Q 011706 159 GDICDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKL 228 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~ 228 (479)
+|++|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+.+ +||++
T Consensus 65 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~i 143 (244)
T 2bd0_A 65 ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG-HIFFI 143 (244)
T ss_dssp CCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEE
T ss_pred ecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-EEEEE
Confidence 9999999998887642 6999999999764322 2234556788899999999999998843 3555 99999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...+.. ..+...|+.+|++.+.+++.++.+ .|++++++|||.|+++.....
T Consensus 144 sS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 199 (244)
T 2bd0_A 144 TSVAATKA------------------------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV 199 (244)
T ss_dssp CCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC
T ss_pred ecchhcCC------------------------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc
Confidence 99776532 234689999999999999988876 489999999999999853210
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
.. . . ...+++++|+|++++.++..+..
T Consensus 200 -----------------------------~~------~-~-~~~~~~~~dva~~~~~l~~~~~~ 226 (244)
T 2bd0_A 200 -----------------------------DD------E-M-QALMMMPEDIAAPVVQAYLQPSR 226 (244)
T ss_dssp -----------------------------CS------T-T-GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred -----------------------------cc------c-c-cccCCCHHHHHHHHHHHHhCCcc
Confidence 00 0 0 12679999999999999986544
No 225
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.91 E-value=3.2e-23 Score=197.60 Aligned_cols=215 Identities=15% Similarity=0.161 Sum_probs=151.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+.+|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+ +.++.++.+|++|
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~Dv~d 85 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDAL----------------QETAAEI----GDDALCVPTDVTD 85 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHH----TSCCEEEECCTTS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHh----CCCeEEEEecCCC
Confidence 4689999999999999999999999999999998864321 1111111 3578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHHc----CC-cceEEEeecc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQ-ECHLVKLGTM 231 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~-~~~~V~~SS~ 231 (479)
+++++++++.. ++|+||||||.... +....+.+++.+++++|+.|+.++++++... +. ..+||++||.
T Consensus 86 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~ 165 (272)
T 4dyv_A 86 PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSI 165 (272)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCS
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECch
Confidence 99998888754 79999999998543 2333466678889999999999998877543 21 2399999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 166 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---- 217 (272)
T 4dyv_A 166 SATS------------------------PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK---- 217 (272)
T ss_dssp STTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------
T ss_pred hhcC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh----
Confidence 5442 22346899999999999999999884 8999999999998774221
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPG 371 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g 371 (479)
+. .+... .. .......+.+++|+|++++.++..+....
T Consensus 218 -------------------~~----~~~~~-~~-~~~~~~~~~~pedvA~~v~fL~s~~~~~~ 255 (272)
T 4dyv_A 218 -------------------MK----AGVPQ-AD-LSIKVEPVMDVAHVASAVVYMASLPLDAN 255 (272)
T ss_dssp -------------------------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred -------------------hc----ccchh-hh-hcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence 00 00000 00 01122357899999999999999876543
No 226
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.91 E-value=4e-24 Score=209.08 Aligned_cols=248 Identities=11% Similarity=0.109 Sum_probs=173.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++......... .......+..+.+.. .+.++.++.+|++
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~ 96 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPA------SGGSAAQSVVDEITA-AGGEAVADGSNVA 96 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBT------CTTSHHHHHHHHHHH-TTCEEEEECCCTT
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCccccccccc------ccHHHHHHHHHHHHh-cCCcEEEEECCCC
Confidence 357899999999999999999999999999999987521100000 000011122222222 2457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcCC---------cceEEE
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ---------ECHLVK 227 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~---------~~~~V~ 227 (479)
|.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++..... ..+||+
T Consensus 97 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~ 176 (322)
T 3qlj_A 97 DWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIIN 176 (322)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEE
Confidence 999988887754 7999999999865432 2345667888999999999999998854311 139999
Q ss_pred eeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCc
Q 011706 228 LGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDE 304 (479)
Q Consensus 228 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~ 304 (479)
+||...+. +......|+.||++.+.+++.++.+ .|+++++++|| +..+....
T Consensus 177 isS~~~~~------------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~ 231 (322)
T 3qlj_A 177 TSSGAGLQ------------------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET 231 (322)
T ss_dssp ECCHHHHH------------------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC
T ss_pred EcCHHHcc------------------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh
Confidence 99965442 1223678999999999999999998 48999999999 65443211
Q ss_pred hhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
. +.... ........+++++|+|++++.++..... .|+ +|++.++.
T Consensus 232 ~---------------~~~~~----------------~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~--~i~vdGG~ 278 (322)
T 3qlj_A 232 V---------------FAEMM----------------ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGK--VFEVEGGK 278 (322)
T ss_dssp S---------------CCC------------------------CCTTCGGGTHHHHHHHTSGGGGGCCSC--EEEEETTE
T ss_pred h---------------hhhhh----------------hccccccCCCCHHHHHHHHHHHhCccccCCCCC--EEEECCCc
Confidence 0 00000 0112234567899999999999865443 455 88887742
Q ss_pred ------------------cCHHHHHHHHHHH
Q 011706 383 ------------------FSVNQLAALVTKA 395 (479)
Q Consensus 383 ------------------~s~~el~~~i~~~ 395 (479)
+++.|+++.+.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~ 309 (322)
T 3qlj_A 279 IRVAEGWAHGPQIDKGARWDPAELGPVVADL 309 (322)
T ss_dssp EEEEECCEEEEEEECSSCCCGGGHHHHHHHH
T ss_pred cccCCCcccccccCccCCCCHHHHHHHHHHH
Confidence 3779999999998
No 227
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.91 E-value=6.5e-23 Score=195.97 Aligned_cols=228 Identities=15% Similarity=0.135 Sum_probs=164.5
Q ss_pred CCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGGD--GYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGat--G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+++|+||||||+ |+||.+++++|+++|++|++++|... . .+..+.+.... .++.++.+|+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~----------------~~~~~~l~~~~-~~~~~~~~D~ 65 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L----------------EKRVRPIAQEL-NSPYVYELDV 65 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T----------------HHHHHHHHHHT-TCCCEEECCT
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H----------------HHHHHHHHHhc-CCcEEEEcCC
Confidence 468999999999 99999999999999999999988542 0 01112221111 2478899999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCc-----ccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeec
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS 230 (479)
+|+++++++++.. ++|+||||||.... +....+.+++..++++|+.|+.++++++...- .+.+||++||
T Consensus 66 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 66 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp TCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 9999998887753 68999999997642 22234556778899999999999999997751 1139999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+. +..+...|+.||++.+.+++.++.++ |+++++++||.|.++.....
T Consensus 146 ~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-- 199 (275)
T 2pd4_A 146 LGSTK------------------------YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-- 199 (275)
T ss_dssp GGGTS------------------------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS--
T ss_pred chhcC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc--
Confidence 65432 12236789999999999999999886 89999999999998753210
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.....+...+....+ ...+.+++|+|++++.++..... .|+ ++++.++
T Consensus 200 ---------------~~~~~~~~~~~~~~p---------~~~~~~p~dva~~~~~l~s~~~~~~tG~--~~~vdgg 249 (275)
T 2pd4_A 200 ---------------ADFRMILKWNEINAP---------LRKNVSLEEVGNAGMYLLSSLSSGVSGE--VHFVDAG 249 (275)
T ss_dssp ---------------TTHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ---------------cccHHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhCccccCCCCC--EEEECCC
Confidence 001122222222111 12467899999999999975433 454 8988875
No 228
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.91 E-value=1.5e-23 Score=196.79 Aligned_cols=227 Identities=14% Similarity=0.077 Sum_probs=163.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSN-KGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~-~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
++|++|||||+|+||.+++++|++ .|+.|+++++.... ....+.++.+|++|
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~---------------------------~~~~~~~~~~Dv~~ 55 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------------------------SAENLKFIKADLTK 55 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC---------------------------CCTTEEEEECCTTC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc---------------------------ccccceEEecCcCC
Confidence 578999999999999999999999 78999988875331 11467889999999
Q ss_pred hHHHHHHhhhc---CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEeeccccccCCC
Q 011706 164 FEFLSESFKSF---EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKLGTMGEYGTPN 238 (479)
Q Consensus 164 ~~~~~~~~~~~---~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~SS~~v~g~~~ 238 (479)
.++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++...-. ..+||++||...+.
T Consensus 56 ~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~--- 132 (244)
T 4e4y_A 56 QQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI--- 132 (244)
T ss_dssp HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC---
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc---
Confidence 99999888643 6899999999865422 2345667888999999999999999876421 13899999976552
Q ss_pred CCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhhhccc
Q 011706 239 IDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEELCNRL 315 (479)
Q Consensus 239 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~ 315 (479)
+......|+.||++.+.+++.++.+ +|+++++++||.|..+...... ......
T Consensus 133 ---------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~- 188 (244)
T 4e4y_A 133 ---------------------AKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLI--QKYANN- 188 (244)
T ss_dssp ---------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHH--HHHHHH-
T ss_pred ---------------------CCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHH--Hhhhhh-
Confidence 2234679999999999999999986 4899999999999876321100 000000
Q ss_pred CCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 316 DYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.............. ......+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 189 -----~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~--~i~vdGG 240 (244)
T 4e4y_A 189 -----VGISFDEAQKQEEK---------EFPLNRIAQPQEIAELVIFLLSDKSKFMTGG--LIPIDGG 240 (244)
T ss_dssp -----HTCCHHHHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -----cCCCHHHHHHHHhh---------cCCCCCCcCHHHHHHHHHHHhcCccccccCC--eEeECCC
Confidence 00000001122211 12334678999999999999976544 355 9999875
No 229
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.91 E-value=1.5e-23 Score=199.88 Aligned_cols=242 Identities=15% Similarity=0.050 Sum_probs=169.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|+++++..... ..+..+.+.. .+.++.++.+|++
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~Dv~ 78 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD---------------AEKVVSEIKA-LGSDAIAIKADIR 78 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---------------HHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---------------HHHHHHHHHh-cCCcEEEEEcCCC
Confidence 46789999999999999999999999999999987754321 1111112211 2467899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYG 235 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g 235 (479)
|.++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++...- ...+||++||.....
T Consensus 79 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~ 158 (270)
T 3is3_A 79 QVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD 158 (270)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc
Confidence 999998888754 7999999999865433 233666788999999999999999997653 123899999964211
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
.+..+...|+.||++.+.+++.++.++ |+++++++||.|..+..... .
T Consensus 159 -----------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~ 209 (270)
T 3is3_A 159 -----------------------FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEV------S 209 (270)
T ss_dssp -----------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHH------G
T ss_pred -----------------------CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh------h
Confidence 122346889999999999999999884 89999999999988753210 0
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
......+. .............. .....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 210 ~~~~~~~~-~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~L~s~~~~~itG~--~i~vdGG 268 (270)
T 3is3_A 210 HHYIPNGT-SYTAEQRQQMAAHA---------SPLHRNGWPQDVANVVGFLVSKEGEWVNGK--VLTLDGG 268 (270)
T ss_dssp GGGSTTGG-GSCHHHHHHHHHHH---------STTCSCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred hhcccccc-ccchHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCccCCccCc--EEEeCCC
Confidence 00000000 00011111111111 1234568899999999999875443 355 9998874
No 230
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.91 E-value=2.6e-23 Score=196.06 Aligned_cols=216 Identities=15% Similarity=0.113 Sum_probs=156.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||++++++|+++|++|++++|.... ...+.++.+|++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----------------------------~~~~~~~~~Dl~ 69 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP----------------------------PEGFLAVKCDIT 69 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------------------------CTTSEEEECCTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh----------------------------hccceEEEecCC
Confidence 3568999999999999999999999999999999875321 023778899999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|+||||||...... ...+++++..++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 70 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~ 148 (253)
T 2nm0_A 70 DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKG-RVVLISSVV 148 (253)
T ss_dssp SHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEECchh
Confidence 999998887643 5899999999764322 2335667888999999999999987754 3555 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+. +......|+.+|++.+.+++.++.++ |+++++++||.|..+....
T Consensus 149 ~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----- 199 (253)
T 2nm0_A 149 GLL------------------------GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV----- 199 (253)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------
T ss_pred hCC------------------------CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-----
Confidence 431 11225789999999999999999885 7999999999987664210
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
............. ....+++.+|+|++++.++..+.. .|+ ++++.++
T Consensus 200 --------------~~~~~~~~~~~~~---------p~~~~~~p~dvA~~i~~l~s~~~~~~tG~--~i~vdGG 248 (253)
T 2nm0_A 200 --------------LTDEQRANIVSQV---------PLGRYARPEEIAATVRFLASDDASYITGA--VIPVDGG 248 (253)
T ss_dssp ------------------CHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred --------------cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCCcCc--EEEECCc
Confidence 0000111111111 123578999999999999976543 454 8998875
No 231
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.91 E-value=1.1e-22 Score=195.97 Aligned_cols=229 Identities=14% Similarity=0.111 Sum_probs=165.4
Q ss_pred CCCCcEEEEEcCCch--hhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 83 PSKAKRVMIIGGDGY--CGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGatG~--iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
.+++|+||||||+|+ ||.+++++|+++|++|++++|.... .+.++.+.... .++.++.+|
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-----------------~~~~~~~~~~~-~~~~~~~~D 89 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-----------------KKRVEPLAEEL-GAFVAGHCD 89 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-----------------HHHHHHHHHHH-TCEEEEECC
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-----------------HHHHHHHHHhc-CCceEEECC
Confidence 467899999999987 9999999999999999999876321 11111211111 368899999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCc-----ccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEee
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSA-----PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLG 229 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~S 229 (479)
++|.++++++++.. ++|+||||||.... +....+.+++..++++|+.|+.++++++...- ...+||++|
T Consensus 90 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 90 VADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp TTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 99999998888753 79999999997641 22344566788899999999999999987642 124999999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchh
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
|...+. +......|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 170 S~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 225 (293)
T 3grk_A 170 YYGAEK------------------------VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG 225 (293)
T ss_dssp CGGGTS------------------------BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C
T ss_pred ehhhcc------------------------CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc
Confidence 966542 22336899999999999999999885 899999999999887532110
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.............+ ...+..++|+|++++.++..... .|+ ++++.++
T Consensus 226 -----------------~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~~~~itG~--~i~vdGG 274 (293)
T 3grk_A 226 -----------------DFRYILKWNEYNAP---------LRRTVTIDEVGDVGLYFLSDLSRSVTGE--VHHADSG 274 (293)
T ss_dssp -----------------CHHHHHHHHHHHST---------TSSCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred -----------------chHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCccccCCcce--EEEECCC
Confidence 01122222222211 23567899999999999976443 455 9999875
No 232
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.90 E-value=6e-23 Score=189.60 Aligned_cols=200 Identities=10% Similarity=0.083 Sum_probs=145.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHH-hCCCeEEEEecccc-cccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLS-NKGYEVAIVDSLIR-RLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll-~~G~~V~~~dr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+|+||||||+|+||++++++|+ ++|++|++++|... .. +.+. ....++.++.+|++|
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~--------------------~~~~-~~~~~~~~~~~D~~d 63 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI--------------------PPEI-IDHERVTVIEGSFQN 63 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS--------------------CHHH-HTSTTEEEEECCTTC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc--------------------hhhc-cCCCceEEEECCCCC
Confidence 4679999999999999999999 89999999998543 11 1110 023578999999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCcC
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEE 243 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~e 243 (479)
++++.++++ ++|+||||||.. |+. ++++++++++.+.+ +||++||.++|+.......+
T Consensus 64 ~~~~~~~~~--~~d~vv~~ag~~------------------n~~-~~~~~~~~~~~~~~-~iv~iSs~~~~~~~~~~~~~ 121 (221)
T 3r6d_A 64 PGXLEQAVT--NAEVVFVGAMES------------------GSD-MASIVKALSRXNIR-RVIGVSMAGLSGEFPVALEK 121 (221)
T ss_dssp HHHHHHHHT--TCSEEEESCCCC------------------HHH-HHHHHHHHHHTTCC-EEEEEEETTTTSCSCHHHHH
T ss_pred HHHHHHHHc--CCCEEEEcCCCC------------------Chh-HHHHHHHHHhcCCC-eEEEEeeceecCCCCccccc
Confidence 999999998 899999999841 445 89999999999887 99999999888753321111
Q ss_pred CceeecCCCCCCCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCccc
Q 011706 244 GYITINHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~ 322 (479)
.. . .... .|+.+|..+|.+++ ..|++++++|||.++++....
T Consensus 122 ~~--------------~-~~~~~~y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~------------------ 164 (221)
T 3r6d_A 122 WT--------------F-DNLPISYVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXT------------------ 164 (221)
T ss_dssp HH--------------H-HTSCHHHHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCC------------------
T ss_pred cc--------------c-cccccHHHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCc------------------
Confidence 00 0 1123 89999999999775 469999999999999873211
Q ss_pred chHHHHHHHHhcCCCeEEecCCCc-eeccccHHHHHHHHHHHH--hCCCCCCCceEEEeCC
Q 011706 323 TALNRFCVQAAVGHPLTVYGKGGQ-TRGYLDIRDTVQCVELAI--ANPAQPGEFRVFNQFT 380 (479)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~a~~~~~--~~~~~~g~~~~~ni~~ 380 (479)
.+.....+.. ...+++.+|+|++++.++ .++.... .+.+.+.+
T Consensus 165 --------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~-~~~~~i~~ 210 (221)
T 3r6d_A 165 --------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFH-RTSIGVGE 210 (221)
T ss_dssp --------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGT-TEEEEEEC
T ss_pred --------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhh-cceeeecC
Confidence 0111111111 224799999999999999 7665322 23676664
No 233
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.90 E-value=7.3e-23 Score=194.10 Aligned_cols=216 Identities=16% Similarity=0.120 Sum_probs=153.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++|
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~d 64 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI----------------EAIATEIRD-AGGTALAQVLDVTD 64 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHHH-TTCEEEEEECCTTC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHh-cCCcEEEEEcCCCC
Confidence 3578999999999999999999999999999999864321 111222221 24578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v 233 (479)
.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++.. .+.+ +||++||...
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~IV~isS~~~ 143 (264)
T 3tfo_A 65 RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSG-QIINIGSIGA 143 (264)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCe-EEEEEcCHHH
Confidence 99998887654 7999999999865432 2336667888999999999999887743 4555 9999999655
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+. +......|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 144 ~~------------------------~~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~-------- 191 (264)
T 3tfo_A 144 LS------------------------VVPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT-------- 191 (264)
T ss_dssp TC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------
T ss_pred cc------------------------cCCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc--------
Confidence 42 22336789999999999999999886 8999999999997764211
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQP 370 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~ 370 (479)
+. ......... .....++..+|+|++++.++..+...
T Consensus 192 ---------------~~----~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~~ 228 (264)
T 3tfo_A 192 ---------------IT----HEETMAAMD--TYRAIALQPADIARAVRQVIEAPQSV 228 (264)
T ss_dssp -------------------------------------CCCHHHHHHHHHHHHHSCTTE
T ss_pred ---------------cc----chhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCccC
Confidence 00 000000000 01112478999999999999987653
No 234
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.90 E-value=6.3e-23 Score=191.91 Aligned_cols=219 Identities=14% Similarity=0.068 Sum_probs=159.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|++|||||+|+||++++++|+++|++|++++|.... ..+.+ ++.++.+|++| +
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-------------------~~~~~------~~~~~~~D~~~-~ 55 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-------------------AAQSL------GAVPLPTDLEK-D 55 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHH------TCEEEECCTTT-S
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------------------HHHhh------CcEEEecCCch-H
Confidence 5899999999999999999999999999999885431 01111 27788999999 7
Q ss_pred HHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccccc
Q 011706 166 FLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGEYG 235 (479)
Q Consensus 166 ~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v~g 235 (479)
+++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++. +.+.+ +||++||...+.
T Consensus 56 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~ 134 (239)
T 2ekp_A 56 DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG-RVLFIGSVTTFT 134 (239)
T ss_dssp CHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECchhhcc
Confidence 777665432 6999999999754322 233556778899999999999998884 34555 999999976654
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
.. +..+...|+.||++.+.+++.++.++ |++++++|||.|.++......
T Consensus 135 ~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~------ 186 (239)
T 2ekp_A 135 AG----------------------GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR------ 186 (239)
T ss_dssp CC----------------------TTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH------
T ss_pred CC----------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc------
Confidence 21 11346899999999999999999885 899999999999887421100
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. ...+...+.... ....+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 187 ---------~--~~~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~~~tG~--~~~vdgG 235 (239)
T 2ekp_A 187 ---------Q--NPELYEPITARI---------PMGRWARPEEIARVAAVLCGDEAEYLTGQ--AVAVDGG 235 (239)
T ss_dssp ---------T--CHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred ---------c--CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhcCCCCC--EEEECCC
Confidence 0 011222222211 123578999999999999875433 455 8998875
No 235
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.90 E-value=8.1e-23 Score=190.47 Aligned_cols=200 Identities=19% Similarity=0.136 Sum_probs=144.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+|+||||||+|+||++++++|+++|++|++++|..... .+..+. . .++.++.+|++|.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~---~--~~~~~~~~D~~~~ 62 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL----------------QALAAE---L--EGALPLPGDVREE 62 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHH---S--TTCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHH---h--hhceEEEecCCCH
Confidence 467999999999999999999999999999998854311 011111 1 2688899999999
Q ss_pred HHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccccc
Q 011706 165 EFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGEY 234 (479)
Q Consensus 165 ~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v~ 234 (479)
++++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++.+ ++.+.+ +||++||...+
T Consensus 63 ~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~-~iv~isS~~~~ 141 (234)
T 2ehd_A 63 GDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGG-TIVNVGSLAGK 141 (234)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE-EEEEECCTTTT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc-EEEEECCchhc
Confidence 9988887643 7999999999754322 22355567888999999998776655 445555 99999997655
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
. +..+...|+.+|++.+.+++.++.+ .|++++++|||.+..+...
T Consensus 142 ~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------- 189 (234)
T 2ehd_A 142 N------------------------PFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG-------- 189 (234)
T ss_dssp S------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------
T ss_pred C------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc--------
Confidence 3 2234689999999999999998887 4899999999998765311
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
. . ... ..+++.+|+|++++.++..+..
T Consensus 190 ---------------~----~--~~~----------~~~~~~~dvA~~~~~l~~~~~~ 216 (234)
T 2ehd_A 190 ---------------N----T--PGQ----------AWKLKPEDVAQAVLFALEMPGH 216 (234)
T ss_dssp ---------------------------------------CCHHHHHHHHHHHHHSCCS
T ss_pred ---------------c----c--ccc----------cCCCCHHHHHHHHHHHhCCCcc
Confidence 0 0 000 0157999999999999987644
No 236
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.90 E-value=2.6e-23 Score=200.86 Aligned_cols=248 Identities=13% Similarity=0.072 Sum_probs=171.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCC---ceeEEEcc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGK---NIELYIGD 160 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~D 160 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+... +. ++.++.+|
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~-~~~~~~~~~~~~D 86 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRL----------------EETKQQILKA-GVPAEKINAVVAD 86 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHT-TCCGGGEEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHhc-CCCCceEEEEecC
Confidence 5689999999999999999999999999999999864321 1111112111 22 68899999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCcc---cccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEe
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSAP---YSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKL 228 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~---~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~ 228 (479)
++|+++++++++.. ++|+||||||..... ....+.+++.+++++|+.|+.++++++... + + +||++
T Consensus 87 v~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g-~IV~i 164 (297)
T 1xhl_A 87 VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-G-EIVNV 164 (297)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C-EEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C-EEEEE
Confidence 99999988887643 699999999975432 223456678889999999999999888653 3 4 99999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...+... ..+...|+.+|++.+.+++.++.+ +|+++++++||.|.++.....
T Consensus 165 sS~~~~~~~-----------------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~ 221 (297)
T 1xhl_A 165 SSIVAGPQA-----------------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM 221 (297)
T ss_dssp CCGGGSSSC-----------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred cCchhccCC-----------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc
Confidence 997654311 023678999999999999999876 489999999999988742100
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC---CCCCCceEEEeCCC-
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP---AQPGEFRVFNQFTE- 381 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~~g~~~~~ni~~~- 381 (479)
.. ..........+....... .....+.+++|+|++++.++..+ ...|+ ++++.++
T Consensus 222 ------~~----~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~l~s~~~~~~itG~--~i~vdGG~ 280 (297)
T 1xhl_A 222 ------GL----PETASDKLYSFIGSRKEC---------IPVGHCGKPEEIANIIVFLADRNLSSYIIGQ--SIVADGGS 280 (297)
T ss_dssp ------TC----CHHHHHHHHHHHHHCTTT---------CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSC--EEEESTTG
T ss_pred ------cc----ccccccchHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCcccCCccCc--EEEECCCc
Confidence 00 000000001111221111 12235789999999999998654 23455 9999885
Q ss_pred CcCHHHHHHHHHH
Q 011706 382 QFSVNQLAALVTK 394 (479)
Q Consensus 382 ~~s~~el~~~i~~ 394 (479)
...+.+.+..+.+
T Consensus 281 ~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 281 TLVMGMQTHDLMS 293 (297)
T ss_dssp GGCCGGGGSCHHH
T ss_pred cccccccccchhh
Confidence 3555554444443
No 237
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.90 E-value=1.9e-23 Score=199.60 Aligned_cols=231 Identities=13% Similarity=0.103 Sum_probs=166.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dv~ 92 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST----------------AAVQQRIIA-SGGTAQELAGDLS 92 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----------------HHHHHHHHh-cCCeEEEEEecCC
Confidence 35789999999999999999999999999999999854321 111112211 2467899999999
Q ss_pred ChHHHHHHhhhc----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccc
Q 011706 163 DFEFLSESFKSF----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGE 233 (479)
Q Consensus 163 d~~~~~~~~~~~----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v 233 (479)
|.++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++. +.+.+ +||++||...
T Consensus 93 ~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~Iv~isS~~~ 171 (275)
T 4imr_A 93 EAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWG-RVVSIGSINQ 171 (275)
T ss_dssp STTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGG
T ss_pred CHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECCHHh
Confidence 998888877643 7999999999754432 334667788899999999999999883 34555 9999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 172 ~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---- 223 (275)
T 4imr_A 172 LR------------------------PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRR---- 223 (275)
T ss_dssp TS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHH----
T ss_pred CC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccc----
Confidence 53 22335779999999999999999986 899999999999776311000
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.............. .....+...+|+|++++.++..... .|+ ++++.++
T Consensus 224 ------------~~~~~~~~~~~~~~--------~p~~r~~~pedvA~~v~fL~s~~a~~itG~--~i~vdGG 274 (275)
T 4imr_A 224 ------------AQDPEGWDEYVRTL--------NWMGRAGRPEEMVGAALFLASEACSFMTGE--TIFLTGG 274 (275)
T ss_dssp ------------HHCHHHHHHHHHHH--------STTCSCBCGGGGHHHHHHHHSGGGTTCCSC--EEEESSC
T ss_pred ------------ccChHHHHHHHhhc--------CccCCCcCHHHHHHHHHHHcCcccCCCCCC--EEEeCCC
Confidence 00001111111111 0122457799999999999976544 455 9998764
No 238
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.90 E-value=5.3e-23 Score=196.99 Aligned_cols=229 Identities=16% Similarity=0.052 Sum_probs=162.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.... .+.++.++.+|++
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~Dl~ 93 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD----------------EKAEHLQKT-YGVHSKAYKCNIS 93 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH----------------HHHHHHHHH-HCSCEEEEECCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcceEEEeecC
Confidence 46789999999999999999999999999999998864311 011111111 1357889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc-cc-c-cccccccchhhhhhHHHH----HHHHHHHHHcCCcceEEEeec
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA-PY-S-MIDRSRAVFTQHNNVIGT----LNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~-~~-~-~~~~~~~~~~~~~Nv~g~----~~ll~~a~~~g~~~~~V~~SS 230 (479)
|.++++++++.. ++|+||||||.... .. . ..+.+++..++++|+.|+ +++++.+++.+.+ +||++||
T Consensus 94 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-~iv~isS 172 (279)
T 3ctm_A 94 DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKG-SLIITSS 172 (279)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-eEEEECc
Confidence 999998888742 59999999997643 11 1 234456778899999995 5666666666666 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+... +..+...|+.+|++.|.+++.++.++ + ++++++||.+.++.....
T Consensus 173 ~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-- 227 (279)
T 3ctm_A 173 ISGKIVN----------------------IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-- 227 (279)
T ss_dssp CTTSCC-------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--
T ss_pred hHhccCC----------------------CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--
Confidence 7544210 12346789999999999999999885 6 999999999988753210
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTEQ 382 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~~ 382 (479)
. ......+.... ....+++++|+|++++.++..+.. .|+ ++++.++.
T Consensus 228 --------------~---~~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~~~tG~--~i~vdgG~ 276 (279)
T 3ctm_A 228 --------------S---KDMKAKWWQLT---------PLGREGLTQELVGGYLYLASNASTFTTGS--DVVIDGGY 276 (279)
T ss_dssp --------------C---HHHHHHHHHHS---------TTCSCBCGGGTHHHHHHHHSGGGTTCCSC--EEEESTTC
T ss_pred --------------C---hHHHHHHHHhC---------CccCCcCHHHHHHHHHHHhCccccCccCC--EEEECCCe
Confidence 0 11111111111 123578999999999999976432 455 99998753
No 239
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.90 E-value=1.6e-22 Score=188.99 Aligned_cols=233 Identities=13% Similarity=0.030 Sum_probs=166.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+++||+++++.|+++|++|+++++.... +.+..+.+.. .+.++.++.+|++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~----------------~~~~~~~i~~-~g~~~~~~~~Dvt 66 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDR----------------LNQIVQELRG-MGKEVLGVKADVS 66 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH----------------HHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH----------------HHHHHHHHHh-cCCcEEEEEccCC
Confidence 4689999999999999999999999999999999986542 1222223322 2467899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
|+++++++++.. ++|++|||||+... +....++++|++++++|+.|++++.+++.. .+.+ +||++||.
T Consensus 67 ~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G-~IVnisS~ 145 (254)
T 4fn4_A 67 KKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG-VIVNTASI 145 (254)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEEech
Confidence 999988887653 79999999997543 234457778999999999999999887743 4555 99999995
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
.-.. +......|+.||++...+.+.++.++ ||+++.|-||.|--|.......
T Consensus 146 ~g~~------------------------~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~- 200 (254)
T 4fn4_A 146 AGIR------------------------GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSK- 200 (254)
T ss_dssp GGTC------------------------SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSS-
T ss_pred hhcC------------------------CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccC-
Confidence 4321 12236789999999999999999985 8999999999986653221100
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
.. ...........+ ...-+...+|+|.+++.++......-.++++++.++
T Consensus 201 -------------~~--~~~~~~~~~~~~--------~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG 250 (254)
T 4fn4_A 201 -------------PS--ELGMRTLTKLMS--------LSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGG 250 (254)
T ss_dssp -------------CC--HHHHHHHHHHHT--------TCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -------------Cc--HHHHHHHHhcCC--------CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCC
Confidence 00 011111111100 112346789999999999876544322338888765
No 240
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=7.2e-23 Score=192.79 Aligned_cols=210 Identities=14% Similarity=0.061 Sum_probs=155.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc--CCCceeEEEcc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL--TGKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D 160 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+... ...++.++.+|
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~D 67 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL----------------EKVHDEIMRSNKHVQEPIVLPLD 67 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHH----------------HHHHHHHHHHCTTSCCCEEEECC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHHhccccCcceEEecc
Confidence 35689999999999999999999999999999999865421 1112222111 12578899999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecc
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTM 231 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~ 231 (479)
++|.++++++++.. ++|+||||||.........+.+++.+++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 68 v~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~ 146 (250)
T 3nyw_A 68 ITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNG-YIFNVASR 146 (250)
T ss_dssp TTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECC-
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EEEEEccH
Confidence 99999988887653 6999999999865433344556788899999999999999883 34555 99999995
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+.
T Consensus 147 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~------- 195 (250)
T 3nyw_A 147 AAKY------------------------GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM------- 195 (250)
T ss_dssp ------------------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-------
T ss_pred HhcC------------------------CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-------
Confidence 4331 11236899999999999999999885 8999999999986541
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
...... ......+++.+|++++++.++..+..
T Consensus 196 --------------------~~~~~~---------~~~~~~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 196 --------------------AKKAGT---------PFKDEEMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp --------------------HHHTTC---------CSCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred --------------------hhhcCC---------CcccccCCCHHHHHHHHHHHHcCCCc
Confidence 111111 11234579999999999999986544
No 241
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.90 E-value=6.5e-23 Score=200.02 Aligned_cols=179 Identities=15% Similarity=0.092 Sum_probs=134.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+... .+.++.++.+|++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~~Dl~ 69 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSI----------------DKALATLEAEGSGPEVMGVQLDVA 69 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHTCGGGEEEEECCTT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHhcCCCCeEEEEECCCC
Confidence 5689999999999999999999999999999999865421 1111122111 1127899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcC---------CcceEEE
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR---------QECHLVK 227 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g---------~~~~~V~ 227 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.... ...+||+
T Consensus 70 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~ 149 (319)
T 3ioy_A 70 SREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVN 149 (319)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEE
Confidence 999998888753 6899999999765432 333556678899999999999999885432 1238999
Q ss_pred eeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCC
Q 011706 228 LGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRT 302 (479)
Q Consensus 228 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~ 302 (479)
+||...+.. ......|+.||++.+.+++.++.++ |+++++++||.|.++..
T Consensus 150 isS~a~~~~------------------------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 203 (319)
T 3ioy_A 150 TASMAAFLA------------------------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIY 203 (319)
T ss_dssp ECCGGGTCC------------------------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----
T ss_pred ecccccccC------------------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcc
Confidence 999665432 2236789999999999888888764 89999999999988754
No 242
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.90 E-value=6.8e-23 Score=189.59 Aligned_cols=211 Identities=12% Similarity=0.067 Sum_probs=160.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|.. . +|++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------------------------------~-----~D~~~ 46 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT--------------------------------G-----LDISD 46 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG--------------------------------T-----CCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc--------------------------------c-----cCCCC
Confidence 4689999999999999999999999999999987631 1 89999
Q ss_pred hHHHHHHhhhc-CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCC
Q 011706 164 FEFLSESFKSF-EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 164 ~~~~~~~~~~~-~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~ 239 (479)
+++++++++.. ++|+||||||.... +....+.+++...+++|+.|+.++++++...- .+.+||++||...+.
T Consensus 47 ~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~---- 122 (223)
T 3uce_A 47 EKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK---- 122 (223)
T ss_dssp HHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS----
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc----
Confidence 99999998865 69999999997632 22334556778899999999999999997642 123899999976553
Q ss_pred CCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC-CceEEeecCeeecCCCCchhhhHhhhcccCCC
Q 011706 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-IRATDLNQGVVYGVRTDETAMHEELCNRLDYD 318 (479)
Q Consensus 240 ~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-l~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~ 318 (479)
+..+...|+.+|++.+.+++.++.+++ +++++++||.|..+......
T Consensus 123 --------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~------------ 170 (223)
T 3uce_A 123 --------------------VVANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMN------------ 170 (223)
T ss_dssp --------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSC------------
T ss_pred --------------------CCCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcc------------
Confidence 223468999999999999999999976 99999999999887432110
Q ss_pred CcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
......+........ ....+.+++|+|++++.++......|+ ++++.++
T Consensus 171 ---~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~~~~l~~~~~~tG~--~i~vdgG 219 (223)
T 3uce_A 171 ---ADDRDAMYQRTQSHL---------PVGKVGEASDIAMAYLFAIQNSYMTGT--VIDVDGG 219 (223)
T ss_dssp ---HHHHHHHHHHHHHHS---------TTCSCBCHHHHHHHHHHHHHCTTCCSC--EEEESTT
T ss_pred ---hhhHHHHHHHHhhcC---------CCCCccCHHHHHHHHHHHccCCCCCCc--EEEecCC
Confidence 111122222222222 234678999999999999987655676 9999875
No 243
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.90 E-value=1.6e-22 Score=190.96 Aligned_cols=220 Identities=15% Similarity=0.124 Sum_probs=156.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYE-VAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~-V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl 161 (479)
+++|+||||||+|+||.+++++|+++|++ |++++|.... +..+.+... .+.++.++.+|+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~------------------~~~~~l~~~~~~~~~~~~~~D~ 64 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP------------------TALAELKAINPKVNITFHTYDV 64 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH------------------HHHHHHHHHCTTSEEEEEECCT
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH------------------HHHHHHHHhCCCceEEEEEEec
Confidence 56899999999999999999999999997 8888875421 011111111 134788999999
Q ss_pred CCh-HHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCC------cceEEEee
Q 011706 162 CDF-EFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQ------ECHLVKLG 229 (479)
Q Consensus 162 ~d~-~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~------~~~~V~~S 229 (479)
+|+ ++++++++.. ++|+||||||.. +++++..++++|+.|+.++++++..... ..+||++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is 137 (254)
T 1sby_A 65 TVPVAESKKLLKKIFDQLKTVDILINGAGIL-------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137 (254)
T ss_dssp TSCHHHHHHHHHHHHHHHSCCCEEEECCCCC-------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CCChHHHHHHHHHHHHhcCCCCEEEECCccC-------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 998 8888777643 799999999963 2345677899999999999999865311 23899999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchh
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
|...+.. ......|+.||++.+.+++.++.+ .|+++++++||.|.++.....
T Consensus 138 S~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~- 192 (254)
T 1sby_A 138 SVTGFNA------------------------IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF- 192 (254)
T ss_dssp CGGGTSC------------------------CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC-
T ss_pred chhhccC------------------------CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccccc-
Confidence 9766532 233678999999999999998876 589999999999988732100
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
..... . ...+...... ..+.+++|+|++++.+++. ...|+ +|++.++
T Consensus 193 -----------~~~~~-~-~~~~~~~~~~------------~~~~~~~dvA~~i~~~~~~-~~~G~--~~~v~gG 239 (254)
T 1sby_A 193 -----------NSWLD-V-EPRVAELLLS------------HPTQTSEQCGQNFVKAIEA-NKNGA--IWKLDLG 239 (254)
T ss_dssp -----------CCGGG-S-CTTHHHHHTT------------SCCEEHHHHHHHHHHHHHH-CCTTC--EEEEETT
T ss_pred -----------chhhh-h-hHHHHHHHhc------------CCCCCHHHHHHHHHHHHHc-CCCCC--EEEEeCC
Confidence 00000 0 0001111111 1234899999999999874 33455 8998774
No 244
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.90 E-value=1.7e-22 Score=194.41 Aligned_cols=226 Identities=15% Similarity=0.068 Sum_probs=162.9
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc-ccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI-RRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|.. .. +.+..+.+....+.++.++.+|+
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~----------------~~~~~~~l~~~~~~~~~~~~~Dv 83 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEA----------------AVSLADELNKERSNTAVVCQADL 83 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHH----------------HHHHHHHHHHHSTTCEEEEECCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHH----------------HHHHHHHHHhhcCCceEEEEeec
Confidence 45789999999999999999999999999999999864 21 11111122111235788999999
Q ss_pred CC----hHHHHHHhhhc-----CCCEEEEcccccCcccc------c-----ccccccchhhhhhHHHHHHHHHHHHHc--
Q 011706 162 CD----FEFLSESFKSF-----EPDAVVHFGEQRSAPYS------M-----IDRSRAVFTQHNNVIGTLNVLFAMKEF-- 219 (479)
Q Consensus 162 ~d----~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~------~-----~~~~~~~~~~~~Nv~g~~~ll~~a~~~-- 219 (479)
+| .++++++++.. ++|+||||||....... . .+.+++..++++|+.|+.++++++...
T Consensus 84 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 163 (288)
T 2x9g_A 84 TNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQK 163 (288)
T ss_dssp SCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 99 88888877643 79999999997543221 2 344567788999999999999988653
Q ss_pred --C------CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCc
Q 011706 220 --R------QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIR 288 (479)
Q Consensus 220 --g------~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~ 288 (479)
+ .+ +||++||...+. +..+...|+.||++.+.+++.++.++ |++
T Consensus 164 ~~~~~~~~~~g-~iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~ 218 (288)
T 2x9g_A 164 GTNPNCTSSNL-SIVNLCDAMVDQ------------------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIR 218 (288)
T ss_dssp -------CCCE-EEEEECCTTTTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred hcCCCCCCCCe-EEEEEecccccC------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeE
Confidence 2 33 999999976542 22346889999999999999999885 899
Q ss_pred eEEeecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceecc-ccHHHHHHHHHHHHhCC
Q 011706 289 ATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGY-LDIRDTVQCVELAIANP 367 (479)
Q Consensus 289 ~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~Dva~a~~~~~~~~ 367 (479)
+++++||.|+++. ... ......+....+ ...+ ...+|+|++++.++...
T Consensus 219 vn~v~PG~v~t~~-~~~--------------------~~~~~~~~~~~p---------~~r~~~~pedvA~~v~~l~s~~ 268 (288)
T 2x9g_A 219 VNGVAPGVSLLPV-AMG--------------------EEEKDKWRRKVP---------LGRREASAEQIADAVIFLVSGS 268 (288)
T ss_dssp EEEEEESSCSCCT-TSC--------------------HHHHHHHHHTCT---------TTSSCCCHHHHHHHHHHHHSGG
T ss_pred EEEEEeccccCcc-ccC--------------------hHHHHHHHhhCC---------CCCCCCCHHHHHHHHHHHhCcc
Confidence 9999999999885 210 011122222211 1234 78999999999999754
Q ss_pred CC--CCCceEEEeCCC
Q 011706 368 AQ--PGEFRVFNQFTE 381 (479)
Q Consensus 368 ~~--~g~~~~~ni~~~ 381 (479)
.. .|+ ++++.++
T Consensus 269 ~~~itG~--~i~vdGG 282 (288)
T 2x9g_A 269 AQYITGS--IIKVDGG 282 (288)
T ss_dssp GTTCCSC--EEEESTT
T ss_pred ccCccCC--EEEECcc
Confidence 33 454 8888875
No 245
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.90 E-value=6.3e-23 Score=196.54 Aligned_cols=219 Identities=16% Similarity=0.151 Sum_probs=154.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+....+..+.++.+|++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~Dv~ 93 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVL----------------DAAAGEIGGRTGNIVRAVVCDVG 93 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHHSSCEEEEECCTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHhcCCCeEEEEEcCCC
Confidence 45789999999999999999999999999999999865421 11122222222234689999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHHc----C-CcceEEEeec
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----R-QECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g-~~~~~V~~SS 230 (479)
|.++++++++.. ++|+||||||.... +....+.+++.+++++|+.|+.++++++... + ...+||++||
T Consensus 94 d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 173 (281)
T 4dry_A 94 DPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS 173 (281)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 999998888754 79999999997543 2333466678889999999999988877542 2 1239999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
...+. +..+...|+.||++.+.+++.++.+ +|+++++++||.|..+....
T Consensus 174 ~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--- 226 (281)
T 4dry_A 174 ISAQT------------------------PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR--- 226 (281)
T ss_dssp GGGTC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--------
T ss_pred HHhCC------------------------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh---
Confidence 65432 2234789999999999999999988 48999999999997763210
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQP 370 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~ 370 (479)
.... ..-.........++.++|+|++++.++..+...
T Consensus 227 ------------------------~~~~--~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~ 263 (281)
T 4dry_A 227 ------------------------MSTG--VLQANGEVAAEPTIPIEHIAEAVVYMASLPLSA 263 (281)
T ss_dssp --------------------------CE--EECTTSCEEECCCBCHHHHHHHHHHHHHSCTTE
T ss_pred ------------------------hcch--hhhhhhcccccCCCCHHHHHHHHHHHhCCCccC
Confidence 1000 000000112234789999999999999987653
No 246
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.90 E-value=1.9e-22 Score=191.29 Aligned_cols=209 Identities=15% Similarity=0.129 Sum_probs=153.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~ 88 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL----------------RAVEREIVA-AGGEAESHACDLS 88 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCEEEEEECCTT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHH-hCCceeEEEecCC
Confidence 35789999999999999999999999999999998864321 111112211 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
|.+++.++++.. ++|+||||||.... .....+++++..++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 89 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~ 167 (262)
T 3rkr_A 89 HSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRG-HIINISSL 167 (262)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-EEEEECSS
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc-eEEEEech
Confidence 999998887753 69999999997322 223345667788999999999999998744 4455 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+. +..+...|+.+|++.+.+++.++.+ .|+++++++||.|..+....
T Consensus 168 ~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---- 219 (262)
T 3rkr_A 168 AGKN------------------------PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---- 219 (262)
T ss_dssp CSSC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------
T ss_pred hhcC------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc----
Confidence 5442 2234689999999999999999987 48999999999987653210
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
+ . .......++..+|+|++++.++..+..
T Consensus 220 -------------------~----~---------~~~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 220 -------------------L----S---------AKKSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp -----------------------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred -------------------c----c---------cccccccCCCHHHHHHHHHHHhcCccc
Confidence 0 0 001223568999999999999987554
No 247
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.1e-22 Score=195.36 Aligned_cols=229 Identities=16% Similarity=0.094 Sum_probs=163.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY---EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIG 159 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~---~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~ 159 (479)
+++|+||||||+|+||.+++++|+++|+ +|++++|..... .+..+.+... .+.++.++.+
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~~ 94 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL----------------EELKKTIDQEFPNAKVHVAQL 94 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHH----------------HHHHHHHHHHCTTCEEEEEEC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHH----------------HHHHHHHHhhCCCCeEEEEEC
Confidence 4689999999999999999999999998 999998864321 1112222211 2457899999
Q ss_pred ccCChHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEe
Q 011706 160 DICDFEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKL 228 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~ 228 (479)
|++|+++++++++.. ++|+||||||.... +....+.+++.+++++|+.|+.++++++ ++.+.+ +||++
T Consensus 95 Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~IV~i 173 (287)
T 3rku_A 95 DITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSG-DIVNL 173 (287)
T ss_dssp CTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEE
Confidence 999999999998754 69999999997542 2223356678889999999999999988 344555 99999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...+. +......|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 174 sS~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~ 229 (287)
T 3rku_A 174 GSIAGRD------------------------AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVR 229 (287)
T ss_dssp CCGGGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHH
T ss_pred CChhhcC------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccccc
Confidence 9965442 22346899999999999999999984 89999999999987631000
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
. ...... ........ ..+.++|+|++++.++..+...-..+++++.++
T Consensus 230 ~---------------~~~~~~-~~~~~~~~------------~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g 277 (287)
T 3rku_A 230 Y---------------RGNEEQ-AKNVYKDT------------TPLMADDVADLIVYATSRKQNTVIADTLIFPTN 277 (287)
T ss_dssp T---------------TTCHHH-HHHHHTTS------------CCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred c---------------cCcHHH-HHHhhccc------------CCCCHHHHHHHHHHHhCCCCCeEecceEEeeCC
Confidence 0 000011 11111111 124899999999999987655322237777664
No 248
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.90 E-value=7.2e-23 Score=195.05 Aligned_cols=232 Identities=12% Similarity=0.069 Sum_probs=162.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+. + .++.++.+|++|
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~---~--~~~~~~~~Dv~d 65 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----------------RALEQE---L--PGAVFILCDVTQ 65 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHH---C--TTEEEEECCTTS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHH---h--cCCeEEEcCCCC
Confidence 5689999999999999999999999999999998854311 011111 1 247889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccc-
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMG- 232 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~- 232 (479)
+++++++++.. ++|+||||||.... .....+.+++..++++|+.|+.++++++... +.+ +||++||..
T Consensus 66 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g-~iv~isS~~~ 144 (270)
T 1yde_A 66 EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQG-NVINISSLVG 144 (270)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC-EEEEEcCccc
Confidence 99998887753 79999999997542 2223355667889999999999999988542 234 999999954
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.++.+ ....|+.+|++.+.+++.++.+ +|+++++++||.|+++....
T Consensus 145 ~~~~~-------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~----- 194 (270)
T 1yde_A 145 AIGQA-------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE----- 194 (270)
T ss_dssp HHCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-----
T ss_pred cCCCC-------------------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhh-----
Confidence 34322 2578999999999999999887 48999999999999873110
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC-CCCCCceEEEeCCC-CcCHH
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP-AQPGEFRVFNQFTE-QFSVN 386 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~~g~~~~~ni~~~-~~s~~ 386 (479)
.... . ... ...+....... ....+...+|+|++++.++... ...|+ ++++.++ .+...
T Consensus 195 -~~~~---~---~~~-~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~~~itG~--~i~vdGG~~~~~~ 254 (270)
T 1yde_A 195 -LAAL---M---PDP-RASIREGMLAQ---------PLGRMGQPAEVGAAAVFLASEANFCTGI--ELLVTGGAELGYG 254 (270)
T ss_dssp -HHTT---S---SSH-HHHHHHHHHTS---------TTSSCBCHHHHHHHHHHHHHHCTTCCSC--EEEESTTTTSCC-
T ss_pred -hhhc---c---cch-HHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHcccCCCcCCC--EEEECCCeecccC
Confidence 0000 0 000 00111111111 1224678999999999888752 22455 8999885 34433
No 249
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.90 E-value=8.6e-23 Score=192.42 Aligned_cols=206 Identities=12% Similarity=0.031 Sum_probs=157.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
..+|+||||||+|+||.+++++|+++|++|++++|.... .....+.+|++|
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~-----------------------------~~~~~~~~d~~d 70 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP-----------------------------NADHSFTIKDSG 70 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------------------TSSEEEECSCSS
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc-----------------------------ccccceEEEeCC
Confidence 457899999999999999999999999999999986431 112356889999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc--ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecccccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY--SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYG 235 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~--~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g 235 (479)
.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++...- .+.+||++||...+.
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~ 150 (251)
T 3orf_A 71 EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN 150 (251)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc
Confidence 99998888754 6899999999754322 233455678889999999999999997642 123899999976552
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH-----hCCceEEeecCeeecCCCCchhhhHh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA-----WGIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+..+...|+.+|++.+.+++.++.+ .|+++++++||.|..+.
T Consensus 151 ------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~--------- 197 (251)
T 3orf_A 151 ------------------------RTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT--------- 197 (251)
T ss_dssp ------------------------CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---------
T ss_pred ------------------------CCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---------
Confidence 2234689999999999999999988 47999999999987652
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhC---CCCCCCceEEEeCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIAN---PAQPGEFRVFNQFT 380 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~---~~~~g~~~~~ni~~ 380 (479)
....... .....+++++|+|++++.++.. ....|+ ++++.+
T Consensus 198 ------------------~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~--~i~v~~ 241 (251)
T 3orf_A 198 ------------------NRKYMSD---------ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGS--LVKFET 241 (251)
T ss_dssp ------------------HHHHCTT---------SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTC--EEEEEE
T ss_pred ------------------hhhhccc---------ccccccCCHHHHHHHHHHHhcCccccCCcce--EEEEec
Confidence 1111111 2345788999999999999988 333455 888876
No 250
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.90 E-value=3.7e-22 Score=186.18 Aligned_cols=218 Identities=16% Similarity=0.065 Sum_probs=157.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+....+.++.++.+|++|+
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~D~~~~ 64 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRL----------------EKIAHELMQEQGVEVFYHHLDVSKA 64 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHHCCCEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHhhcCCeEEEEEeccCCH
Confidence 378999999999999999999999999999998864321 1112222222346889999999999
Q ss_pred HHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccc-cc
Q 011706 165 EFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMG-EY 234 (479)
Q Consensus 165 ~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~-v~ 234 (479)
++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... +.+ ++|++||.. .+
T Consensus 65 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~ii~~sS~~~~~ 143 (235)
T 3l77_A 65 ESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGG-LALVTTSDVSAR 143 (235)
T ss_dssp HHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCGGGSS
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cEEEEecchhcc
Confidence 9999888754 7999999999865432 22356678889999999999999988542 233 666666643 33
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-CCceEEeecCeeecCCCCchhhhHhhhc
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVRTDETAMHEELCN 313 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ivRp~~v~Gp~~~~~~~~~~~~~ 313 (479)
+. .....|+.+|++.+.+++.+..+. |+++++++||.|..+.....
T Consensus 144 ~~-------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~-------- 190 (235)
T 3l77_A 144 LI-------------------------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK-------- 190 (235)
T ss_dssp CC-------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC--------
T ss_pred cC-------------------------CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc--------
Confidence 21 235789999999999999986553 89999999999876642110
Q ss_pred ccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC
Q 011706 314 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT 380 (479)
Q Consensus 314 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~ 380 (479)
. .......++.++|+|++++.++..+......++....+
T Consensus 191 ---------------------------~-~~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~ 229 (235)
T 3l77_A 191 ---------------------------P-GKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSV 229 (235)
T ss_dssp ---------------------------S-CCCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCT
T ss_pred ---------------------------C-CcccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeec
Confidence 0 01112267899999999999999876533223444433
No 251
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.90 E-value=3.6e-23 Score=191.71 Aligned_cols=230 Identities=13% Similarity=0.069 Sum_probs=167.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.++||++|||||+++||.++++.|+++|++|++.++.... +..+... ..+.++..+.+|++
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~------------------~~~~~~~-~~g~~~~~~~~Dv~ 66 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD------------------ETLDIIA-KDGGNASALLIDFA 66 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH------------------HHHHHHH-HTTCCEEEEECCTT
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH------------------HHHHHHH-HhCCcEEEEEccCC
Confidence 4689999999999999999999999999999999875321 1122222 22467899999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccccccCC
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGEYGTP 237 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v~g~~ 237 (479)
|+++++++++..++|++|||||+..... ...++++|++++++|+.|++.+.+++.. .+...+||++||.....
T Consensus 67 d~~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~-- 144 (247)
T 4hp8_A 67 DPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ-- 144 (247)
T ss_dssp STTTTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--
T ss_pred CHHHHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC--
Confidence 9999999888768999999999865433 3346778999999999999999987633 34324999999954321
Q ss_pred CCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhcc
Q 011706 238 NIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCNR 314 (479)
Q Consensus 238 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~ 314 (479)
+......|+.||+....+.+.++.++ ||+++.|-||.|--|..... ..
T Consensus 145 ----------------------g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~------~~- 195 (247)
T 4hp8_A 145 ----------------------GGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL------RA- 195 (247)
T ss_dssp ----------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH------HT-
T ss_pred ----------------------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc------cc-
Confidence 11236789999999999999999985 89999999999866532110 00
Q ss_pred cCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 315 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
-......+....| ..-+-..+|+|.+++.++......-.++++.+.++
T Consensus 196 ----------~~~~~~~~~~~~P---------lgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 196 ----------DAARNKAILERIP---------AGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp ----------SHHHHHHHHTTCT---------TSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ----------CHHHHHHHHhCCC---------CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 0112222333322 22456789999999998876544322348888765
No 252
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.90 E-value=1.2e-22 Score=194.68 Aligned_cols=226 Identities=17% Similarity=0.120 Sum_probs=165.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+. .+.++.++.+|++
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~----------------~~~~~~----~~~~~~~~~~Dl~ 86 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKG----------------KALADE----LGNRAEFVSTNVT 86 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHH----HCTTEEEEECCTT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHHHHH----hCCceEEEEcCCC
Confidence 45789999999999999999999999999999999864321 111111 1457899999999
Q ss_pred ChHHHHHHhhhc----CCCEEEEc-ccccCccc------ccccccccchhhhhhHHHHHHHHHHHHHc---------CCc
Q 011706 163 DFEFLSESFKSF----EPDAVVHF-GEQRSAPY------SMIDRSRAVFTQHNNVIGTLNVLFAMKEF---------RQE 222 (479)
Q Consensus 163 d~~~~~~~~~~~----~~D~Vih~-A~~~~~~~------~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---------g~~ 222 (479)
|.++++++++.. ++|+|||| |+...... ...+.+++..++++|+.|+.++++++... +..
T Consensus 87 ~~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~ 166 (281)
T 3ppi_A 87 SEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGER 166 (281)
T ss_dssp CHHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCC
T ss_pred CHHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCC
Confidence 999998888643 68999999 44432221 12344567888999999999999988532 122
Q ss_pred ceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeec
Q 011706 223 CHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYG 299 (479)
Q Consensus 223 ~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~G 299 (479)
.+||++||...+. +......|+.||++.+.+++.++.++ |+++++++||.|..
T Consensus 167 g~iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T 222 (281)
T 3ppi_A 167 GALVLTASIAGYE------------------------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKT 222 (281)
T ss_dssp EEEEEECCGGGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred eEEEEEecccccC------------------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCc
Confidence 3899999976552 22346899999999999999999885 89999999999976
Q ss_pred CCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeC
Q 011706 300 VRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQF 379 (479)
Q Consensus 300 p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~ 379 (479)
+.... .............++ ...+.+++|+|++++.++......|+ ++++.
T Consensus 223 ~~~~~-------------------~~~~~~~~~~~~~~~--------~~~~~~pedvA~~v~~l~s~~~~tG~--~i~vd 273 (281)
T 3ppi_A 223 PIMES-------------------VGEEALAKFAANIPF--------PKRLGTPDEFADAAAFLLTNGYINGE--VMRLD 273 (281)
T ss_dssp HHHHT-------------------TCHHHHHHHHHTCCS--------SSSCBCHHHHHHHHHHHHHCSSCCSC--EEEES
T ss_pred hhhhc-------------------ccHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHHcCCCcCCc--EEEEC
Confidence 52110 011222233332221 14578999999999999987666676 99998
Q ss_pred CC
Q 011706 380 TE 381 (479)
Q Consensus 380 ~~ 381 (479)
++
T Consensus 274 GG 275 (281)
T 3ppi_A 274 GA 275 (281)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 253
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.90 E-value=9e-23 Score=194.68 Aligned_cols=206 Identities=15% Similarity=0.072 Sum_probs=155.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dl~ 90 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL----------------EETAAKCKG-LGAKVHTFVVDCS 90 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTT
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHH----------------HHHHHHHHh-cCCeEEEEEeeCC
Confidence 45789999999999999999999999999999999864321 111112211 1357899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++...+++|+.|+.++++++. +.+.+ +||++||..
T Consensus 91 ~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~iv~isS~~ 169 (272)
T 1yb1_A 91 NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG-HIVTVASAA 169 (272)
T ss_dssp CHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCCC
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEechh
Confidence 999998887643 6999999999765332 223445667889999999888887764 34555 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh------CCceEEeecCeeecCCCCchh
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW------GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
.+.. ..+...|+.+|++.+.+++.++.++ |+++++++||.|.++....
T Consensus 170 ~~~~------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-- 223 (272)
T 1yb1_A 170 GHVS------------------------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-- 223 (272)
T ss_dssp -CCC------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--
T ss_pred hcCC------------------------CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--
Confidence 5531 1235789999999999999998875 7999999999998774210
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA 368 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~ 368 (479)
. ......+++++|+|++++.++..+.
T Consensus 224 -----------------------------~-------~~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 224 -----------------------------P-------STSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp -----------------------------T-------HHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred -----------------------------c-------cccccCCCCHHHHHHHHHHHHHcCC
Confidence 0 0012357899999999999998653
No 254
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.90 E-value=1.5e-23 Score=199.49 Aligned_cols=234 Identities=15% Similarity=0.104 Sum_probs=158.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+... .+.++.++.+|++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~~D~~ 68 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG----------------VQCKAALHEQFEPQKTLFIQCDVA 68 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHTTTSCGGGEEEEECCTT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHhhcCCCceEEEecCCC
Confidence 4678999999999999999999999999999999864321 1111111111 1246889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHH----HHcC---CcceEEEeec
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFR---QECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g---~~~~~V~~SS 230 (479)
|+++++++++.. ++|+||||||... ++++...+++|+.|+.++.+++ ++.+ .+ +||++||
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g-~iv~isS 140 (267)
T 2gdz_A 69 DQQQLRDTFRKVVDHFGRLDILVNNAGVNN-------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGG-IIINMSS 140 (267)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE-EEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCC-EEEEeCC
Confidence 999998888753 6899999999642 3446778999999877666554 3332 34 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHH--HH---hCCceEEeecCeeecCCCCch
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTC--KA---WGIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~---~gl~~~ivRp~~v~Gp~~~~~ 305 (479)
...+.. ..+...|+.||++.+.+++.++ .+ .|+++++++||.|.++....
T Consensus 141 ~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~- 195 (267)
T 2gdz_A 141 LAGLMP------------------------VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES- 195 (267)
T ss_dssp GGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-
T ss_pred ccccCC------------------------CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-
Confidence 766532 1235789999999999998753 33 48999999999997763110
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC-CCcC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT-EQFS 384 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~-~~~s 384 (479)
+.... ..+.+.. +...+.. + .....+++++|+|++++.++..+...|+ ++++.+ +.++
T Consensus 196 -----~~~~~-~~~~~~~----~~~~~~~--~-------~~~~~~~~~~dvA~~v~~l~s~~~~~G~--~~~v~gg~~~~ 254 (267)
T 2gdz_A 196 -----IEKEE-NMGQYIE----YKDHIKD--M-------IKYYGILDPPLIANGLITLIEDDALNGA--IMKITTSKGIH 254 (267)
T ss_dssp -----GGCHH-HHGGGGG----GHHHHHH--H-------HHHHCCBCHHHHHHHHHHHHHCTTCSSC--EEEEETTTEEE
T ss_pred -----ccccc-ccchhhh----HHHHHHH--H-------hccccCCCHHHHHHHHHHHhcCcCCCCc--EEEecCCCccc
Confidence 00000 0000000 0000000 0 0123478999999999999987665666 999987 4455
Q ss_pred HHH
Q 011706 385 VNQ 387 (479)
Q Consensus 385 ~~e 387 (479)
+.|
T Consensus 255 ~~~ 257 (267)
T 2gdz_A 255 FQD 257 (267)
T ss_dssp ECC
T ss_pred ccC
Confidence 544
No 255
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.90 E-value=4.1e-22 Score=189.00 Aligned_cols=175 Identities=19% Similarity=0.187 Sum_probs=135.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~D~~~ 67 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREAL----------------EKAEASVRE-KGVEARSYVCDVTS 67 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHT-TTSCEEEEECCTTC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHh-cCCcEEEEEecCCC
Confidence 5689999999999999999999999999999998864321 111112211 13468899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEccccc-Cc-ccccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeeccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQR-SA-PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTMG 232 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~-~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~~ 232 (479)
+++++++++.. ++|+||||||.. .. +....+.+++..++++|+.|+.++++++... +.+ +||++||..
T Consensus 68 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~ 146 (262)
T 1zem_A 68 EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG-RIVNTASMA 146 (262)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcchh
Confidence 99888877643 799999999975 22 2223355677889999999999999887543 445 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecC
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGV 300 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp 300 (479)
.+.. ......|+.||++.+.+++.++.++ |+++++++||.|..+
T Consensus 147 ~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 147 GVKG------------------------PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp HHSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred hccC------------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 5421 1236789999999999999998874 899999999998665
No 256
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.90 E-value=2.9e-23 Score=194.16 Aligned_cols=233 Identities=10% Similarity=0.083 Sum_probs=167.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.++||++|||||+++||.++++.|+++|++|++.+|.... +.+..+.+... +.++..+.+|++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~----------------~~~~~~~l~~~-g~~~~~~~~Dv~ 68 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL----------------LAESVDTLTRK-GYDAHGVAFDVT 68 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH----------------HHHHHHHHHHT-TCCEEECCCCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----------------HHHHHHHHHhc-CCcEEEEEeeCC
Confidence 4689999999999999999999999999999999886432 22223333222 457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|+++++++++.. ++|++|||||...... ...++++|++++++|+.|++.+.+++.. .+.+.+||++||..
T Consensus 69 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~ 148 (255)
T 4g81_D 69 DELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT 148 (255)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence 999988877654 6999999999865443 3447788999999999999999887732 22223999999964
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
... +......|+.||++...+.+.++.++ ||+++.|-||.|.-|.....
T Consensus 149 ~~~------------------------~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~---- 200 (255)
T 4g81_D 149 SQA------------------------ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTAL---- 200 (255)
T ss_dssp GTS------------------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHH----
T ss_pred hcC------------------------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcc----
Confidence 331 12236789999999999999999985 89999999999976532110
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQ 382 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~ 382 (479)
.. . ..+...+....|+ .-+...+|+|.+++.++......-.++++.+.|+.
T Consensus 201 --~~--------~---~~~~~~~~~~~Pl---------~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~ 251 (255)
T 4g81_D 201 --IE--------D---KQFDSWVKSSTPS---------QRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGW 251 (255)
T ss_dssp --HT--------C---HHHHHHHHHHSTT---------CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --cC--------C---HHHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence 00 0 1112222222221 23567889999999988654442222389887763
No 257
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.90 E-value=4.4e-22 Score=185.27 Aligned_cols=216 Identities=13% Similarity=0.102 Sum_probs=161.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+++||++++++|+++|++|+++|+.... .+...+ ...++.++.+|++|++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--------------------~~~~~~-~~~~~~~~~~Dv~~~~ 60 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKR--------------------SADFAK-ERPNLFYFHGDVADPL 60 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHT-TCTTEEEEECCTTSHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--------------------HHHHHH-hcCCEEEEEecCCCHH
Confidence 5899999999999999999999999999999986432 111111 1357889999999999
Q ss_pred HHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccccccC
Q 011706 166 FLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMGEYGT 236 (479)
Q Consensus 166 ~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~v~g~ 236 (479)
+++++++.. ++|++|||||...... ...+.++|++++++|+.|++.+.+++... +.+ +||++||...+.
T Consensus 61 ~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G-~IInisS~~~~~- 138 (247)
T 3ged_A 61 TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG-RIINIASTRAFQ- 138 (247)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-EEEEECCGGGTS-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC-cEEEEeeccccc-
Confidence 888877643 7999999999765433 33466789999999999999998887542 234 999999954331
Q ss_pred CCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh--CCceEEeecCeeecCCCCchhhhHhhhcc
Q 011706 237 PNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETAMHEELCNR 314 (479)
Q Consensus 237 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~ 314 (479)
+......|+.||++...+.+.++.++ |++++.|.||.|--+...
T Consensus 139 -----------------------~~~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~----------- 184 (247)
T 3ged_A 139 -----------------------SEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ----------- 184 (247)
T ss_dssp -----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-------------
T ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-----------
Confidence 12236789999999999999999986 699999999998655321
Q ss_pred cCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 315 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
.+........| ..-+...+|+|.+++.++...-..|+ ++.+.|+
T Consensus 185 ------------~~~~~~~~~~P---------l~R~g~pediA~~v~fL~s~~~iTG~--~i~VDGG 228 (247)
T 3ged_A 185 ------------EFTQEDCAAIP---------AGKVGTPKDISNMVLFLCQQDFITGE--TIIVDGG 228 (247)
T ss_dssp -------------CCHHHHHTST---------TSSCBCHHHHHHHHHHHHHCSSCCSC--EEEESTT
T ss_pred ------------HHHHHHHhcCC---------CCCCcCHHHHHHHHHHHHhCCCCCCC--eEEECcC
Confidence 11122222222 22456789999999999986544566 8988765
No 258
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.90 E-value=4.3e-22 Score=187.23 Aligned_cols=219 Identities=17% Similarity=0.148 Sum_probs=154.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+ ..++.++.+|++|+++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~Dv~~~~~ 60 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL----------------QELKDEL----GDNLYIAQLDVRNRAA 60 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHH----CTTEEEEECCTTCHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHh----cCceEEEEcCCCCHHH
Confidence 5899999999999999999999999999998854311 1111111 2468899999999999
Q ss_pred HHHHhhhc-----CCCEEEEcccccC--cccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccccc
Q 011706 167 LSESFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGEYG 235 (479)
Q Consensus 167 ~~~~~~~~-----~~D~Vih~A~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v~g 235 (479)
++++++.. ++|+||||||... .+....+.+++..++++|+.|+.++++++. +.+.+ +||++||...+.
T Consensus 61 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~~~ 139 (248)
T 3asu_A 61 IEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG-HIINIGSTAGSW 139 (248)
T ss_dssp HHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTS
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-eEEEEccchhcc
Confidence 99988754 6999999999753 122334556788899999999999998885 34555 999999975442
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeec-CCCCchhhhHhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYG-VRTDETAMHEEL 311 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~G-p~~~~~~~~~~~ 311 (479)
+..+...|+.||++.+.+++.++.++ |+++++++||.|.| +.....
T Consensus 140 ------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~------ 189 (248)
T 3asu_A 140 ------------------------PYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR------ 189 (248)
T ss_dssp ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------
T ss_pred ------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc------
Confidence 22336799999999999999999885 89999999999985 421100
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC-CCCceEEEeCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ-PGEFRVFNQFT 380 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~-~g~~~~~ni~~ 380 (479)
...- ..... ..+ ....+++.+|+|++++.++..+.. .++ .+.+.+
T Consensus 190 -------------~~~~-~~~~~----~~~----~~~~~~~p~dvA~~v~~l~s~~~~~~g~--~i~v~~ 235 (248)
T 3asu_A 190 -------------FKGD-DGKAE----KTY----QNTVALTPEDVSEAVWWVSTLPAHVNIN--TLEMMP 235 (248)
T ss_dssp -------------------------------------CCBCHHHHHHHHHHHHHSCTTCCCC--EEEECC
T ss_pred -------------ccCc-hHHHH----HHH----hccCCCCHHHHHHHHHHHhcCCccceee--EEEEcc
Confidence 0000 00000 000 012346899999999999986433 333 666655
No 259
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.90 E-value=3.2e-22 Score=195.88 Aligned_cols=225 Identities=12% Similarity=0.043 Sum_probs=163.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEe-cccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVD-SLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~d-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++ |..... .+..+.+....+.++.++.+|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dl~ 107 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEA----------------NALSATLNARRPNSAITVQADLS 107 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------------HHHHHHHHHHSTTCEEEEECCCS
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH----------------HHHHHHHHhhcCCeEEEEEeeCC
Confidence 5689999999999999999999999999999998 653211 11111221112357899999999
Q ss_pred ChH-----------------HHHHHhhhc-----CCCEEEEcccccCcccc-ccc--------------ccccchhhhhh
Q 011706 163 DFE-----------------FLSESFKSF-----EPDAVVHFGEQRSAPYS-MID--------------RSRAVFTQHNN 205 (479)
Q Consensus 163 d~~-----------------~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~--------------~~~~~~~~~~N 205 (479)
|.+ +++++++.. ++|+||||||....... ..+ .+++..++++|
T Consensus 108 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN 187 (328)
T 2qhx_A 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSN 187 (328)
T ss_dssp SSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHH
T ss_pred CchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHH
Confidence 998 888887654 79999999997643221 123 55677889999
Q ss_pred HHHHHHHHHHHHH----cC------CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHH
Q 011706 206 VIGTLNVLFAMKE----FR------QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDS 275 (479)
Q Consensus 206 v~g~~~ll~~a~~----~g------~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 275 (479)
+.|+.++++++.. .+ .+ +||++||...+. +..+...|+.+|++.+
T Consensus 188 ~~g~~~l~~~~~~~m~~~~~~~~~~~g-~IV~isS~~~~~------------------------~~~~~~~Y~asKaal~ 242 (328)
T 2qhx_A 188 AIAPYFLIKAFAHRVAGTPAKHRGTNY-SIINMVDAMTNQ------------------------PLLGYTIYTMAKGALE 242 (328)
T ss_dssp THHHHHHHHHHHHHHHHSCGGGSCSCE-EEEEECCTTTTS------------------------CCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcCCCCCc-EEEEECchhhcc------------------------CCCCcHHHHHHHHHHH
Confidence 9999999998854 23 34 999999975442 2234689999999999
Q ss_pred HHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCcee-ccc
Q 011706 276 HNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTR-GYL 351 (479)
Q Consensus 276 ~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 351 (479)
.+++.++.++ |+++++|+||.|..+. .. +......+....+ .. .+.
T Consensus 243 ~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~--------------------~~~~~~~~~~~~p---------~~~r~~ 292 (328)
T 2qhx_A 243 GLTRSAALELAPLQIRVNGVGPGLSVLVD-DM--------------------PPAVWEGHRSKVP---------LYQRDS 292 (328)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS--------------------CHHHHHHHHTTCT---------TTTSCB
T ss_pred HHHHHHHHHHhhcCcEEEEEecCcccCCc-cc--------------------cHHHHHHHHhhCC---------CCCCCC
Confidence 9999999885 8999999999998875 21 0122222222211 11 467
Q ss_pred cHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 352 DIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 352 ~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.++|+|++++.++..... .|+ ++++.++
T Consensus 293 ~pedvA~~v~~l~s~~~~~itG~--~i~vdGG 322 (328)
T 2qhx_A 293 SAAEVSDVVIFLCSSKAKYITGT--CVKVDGG 322 (328)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred CHHHHHHHHHHHhCccccCccCc--EEEECCC
Confidence 899999999999975333 455 9998875
No 260
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.90 E-value=1.3e-22 Score=194.32 Aligned_cols=220 Identities=19% Similarity=0.156 Sum_probs=153.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~ 162 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+... ...++.++.+|++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI----------------EELAAECKSAGYPGTLIPYRCDLS 93 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHTTCSSEEEEEECCTT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHH----------------HHHHHHHHhcCCCceEEEEEecCC
Confidence 5689999999999999999999999999999999854311 1111111111 1246888999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHH----HHHHHHHHHHcCC-cceEEEeecc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIG----TLNVLFAMKEFRQ-ECHLVKLGTM 231 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g----~~~ll~~a~~~g~-~~~~V~~SS~ 231 (479)
|+++++++++.. ++|+||||||...... ...+.+++..++++|+.| ++.+++.+++.+. ..+||++||.
T Consensus 94 ~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~ 173 (279)
T 1xg5_A 94 NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSM 173 (279)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCG
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcCh
Confidence 999998887643 6999999999754322 223455678889999999 5666666777664 2399999997
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-----CCceEEeecCeeecCCCCchh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-----GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
..+... +..+...|+.+|++.+.+++.++.++ ++++++++||.|.++....
T Consensus 174 ~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~-- 229 (279)
T 1xg5_A 174 SGHRVL----------------------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK-- 229 (279)
T ss_dssp GGTSCC----------------------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH--
T ss_pred hhcccC----------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh--
Confidence 765321 22346789999999999999888763 6999999999998763100
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
.. ......+. .. .....+++++|+|++++.++..+..
T Consensus 230 ----~~---------~~~~~~~~-~~------------~~~~~~~~~~dvA~~i~~l~~~~~~ 266 (279)
T 1xg5_A 230 ----LH---------DKDPEKAA-AT------------YEQMKCLKPEDVAEAVIYVLSTPAH 266 (279)
T ss_dssp ----HT---------TTCHHHHH-HH------------HC---CBCHHHHHHHHHHHHHSCTT
T ss_pred ----hc---------ccChhHHh-hh------------cccccCCCHHHHHHHHHHHhcCCcc
Confidence 00 00000000 00 0112468999999999999987543
No 261
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.89 E-value=5.4e-23 Score=195.64 Aligned_cols=233 Identities=14% Similarity=0.015 Sum_probs=168.9
Q ss_pred CCCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 83 PSKAKRVMIIGGD--GYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGat--G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
.+++|+||||||+ |+||.+++++|+++|++|+++++..... ..+..+.+....+.++.++.+|
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~---------------~~~~~~~l~~~~~~~~~~~~~D 81 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG---------------AEENVKELEKTYGIKAKAYKCQ 81 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSH---------------HHHHHHHHHHHHCCCEECCBCC
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchh---------------HHHHHHHHHHhcCCceeEEecC
Confidence 4678999999999 9999999999999999999988764321 0122222322234678999999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeec
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGT 230 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS 230 (479)
++|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++ ++.+.+ +||++||
T Consensus 82 l~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS 160 (267)
T 3gdg_A 82 VDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTG-SLVITAS 160 (267)
T ss_dssp TTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCc-eEEEEcc
Confidence 99999998888754 7899999999765432 23355677889999999999999988 444555 9999999
Q ss_pred cccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC--CceEEeecCeeecCCCCchhhh
Q 011706 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 231 ~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
...+... ...+...|+.||++.+.+++.++.+++ ++++.+.||.|..+....
T Consensus 161 ~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~---- 214 (267)
T 3gdg_A 161 MSGHIAN----------------------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF---- 214 (267)
T ss_dssp GGGTSCC----------------------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG----
T ss_pred ccccccC----------------------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh----
Confidence 6543211 112468899999999999999999864 899999999997664211
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
............ .....+.+++|+|++++.++......-.++++++.++
T Consensus 215 ---------------~~~~~~~~~~~~---------~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG 263 (267)
T 3gdg_A 215 ---------------VPKETQQLWHSM---------IPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGG 263 (267)
T ss_dssp ---------------SCHHHHHHHHTT---------STTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred ---------------CCHHHHHHHHhc---------CCCCCCcCHHHHHhHhheeecCccccccCCEEEECCc
Confidence 011122222221 2335678899999999999976544322239999875
No 262
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.89 E-value=4.1e-22 Score=190.88 Aligned_cols=227 Identities=15% Similarity=0.141 Sum_probs=166.3
Q ss_pred CCCCcEEEEEcCCch--hhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 83 PSKAKRVMIIGGDGY--CGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGatG~--iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
.+++|+||||||+|+ ||.+++++|+++|++|++++|... .+.++.+.... .++.++.+|
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~------------------~~~~~~l~~~~-~~~~~~~~D 83 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF------------------KDRVEKLCAEF-NPAAVLPCD 83 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC------------------HHHHHHHHGGG-CCSEEEECC
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH------------------HHHHHHHHHhc-CCceEEEee
Confidence 357899999999966 999999999999999999988541 11222222211 358899999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCcc-----ccc-ccccccchhhhhhHHHHHHHHHHHHHc---CCcceEE
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSAP-----YSM-IDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLV 226 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~-----~~~-~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V 226 (479)
++|.++++++++.. ++|+||||||..... ... .+.+++..++++|+.++.++++++... +. .+||
T Consensus 84 l~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv 162 (280)
T 3nrc_A 84 VISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRN-ASMV 162 (280)
T ss_dssp TTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEE
Confidence 99999998888754 689999999976431 111 455567888999999999999998654 23 3999
Q ss_pred EeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCC
Q 011706 227 KLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTD 303 (479)
Q Consensus 227 ~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~ 303 (479)
++||...+. +......|+.||++.+.+++.++.+ .|+++++++||.|..+...
T Consensus 163 ~isS~~~~~------------------------~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~ 218 (280)
T 3nrc_A 163 ALTYIGAEK------------------------AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAAS 218 (280)
T ss_dssp EEECGGGTS------------------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGG
T ss_pred EEecccccc------------------------CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhh
Confidence 999965542 2234689999999999999999987 4899999999999887532
Q ss_pred chhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 304 ETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
... ....+........ ....+..++|+|++++.++..... .|+ ++++.++
T Consensus 219 ~~~-----------------~~~~~~~~~~~~~---------p~~~~~~pedvA~~v~~l~s~~~~~~tG~--~i~vdgG 270 (280)
T 3nrc_A 219 GIS-----------------NFKKMLDYNAMVS---------PLKKNVDIMEVGNTVAFLCSDMATGITGE--VVHVDAG 270 (280)
T ss_dssp GCT-----------------THHHHHHHHHHHS---------TTCSCCCHHHHHHHHHHTTSGGGTTCCSC--EEEESTT
T ss_pred cCc-----------------chHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCcccCCcCCc--EEEECCC
Confidence 110 1122222222222 123568899999999999876443 455 9999875
No 263
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.89 E-value=1.3e-22 Score=189.16 Aligned_cols=203 Identities=15% Similarity=0.149 Sum_probs=149.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+ +.++.++.+|++|.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~----~~~~~~~~~D~~~~ 61 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRL----------------QQQELLL----GNAVIGIVADLAHH 61 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHH----GGGEEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHh----cCCceEEECCCCCH
Confidence 478999999999999999999999999999999864321 1111111 23688999999999
Q ss_pred HHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeecccccc
Q 011706 165 EFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMGEYG 235 (479)
Q Consensus 165 ~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~v~g 235 (479)
++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++... ..+ +||++||...+.
T Consensus 62 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~ 140 (235)
T 3l6e_A 62 EDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGG-VLANVLSSAAQV 140 (235)
T ss_dssp HHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEECCEECCS
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-EEEEEeCHHhcC
Confidence 9998887754 6999999999854322 23356678889999999999999988542 223 899999964332
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+......|+.||++.+.+++.++.++ |+++++++||.|..+....
T Consensus 141 ------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------- 188 (235)
T 3l6e_A 141 ------------------------GKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN-------- 188 (235)
T ss_dssp ------------------------SCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------
T ss_pred ------------------------CCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc--------
Confidence 22236789999999999999999875 7999999999997663210
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 369 (479)
.. . .....++.++|+|++++.++..+..
T Consensus 189 ---------------~~-----~---------~~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 189 ---------------TD-----H---------VDPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp -------------------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred ---------------cC-----C---------CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence 00 0 0112578999999999999986543
No 264
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.89 E-value=7e-22 Score=189.75 Aligned_cols=228 Identities=15% Similarity=0.079 Sum_probs=161.8
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+.+++|++|||||+|+||.+++++|+++|++|++++|........ . ..+.+..+.+.. .+.++.++.+|+
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~--~~~~~~~~~~~~-~~~~~~~~~~Dv 74 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKL-------P--GTIYTAAKEIEE-AGGQALPIVGDI 74 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSS-------C--CCHHHHHHHHHH-HTSEEEEEECCT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhh-------h--HHHHHHHHHHHh-cCCcEEEEECCC
Confidence 346789999999999999999999999999999999865421110 0 011111222221 245799999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS~ 231 (479)
+|.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++... +.+ +||++||.
T Consensus 75 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS~ 153 (285)
T 3sc4_A 75 RDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNP-HILTLSPP 153 (285)
T ss_dssp TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSC-EEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECCh
Confidence 9999998888754 7999999999865432 23356677889999999999999988654 444 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
..+... ..+...|+.||++.+.+++.++.+ .|+++++++||.+...
T Consensus 154 ~~~~~~-----------------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-------- 202 (285)
T 3sc4_A 154 IRLEPK-----------------------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-------- 202 (285)
T ss_dssp CCCSGG-----------------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC--------
T ss_pred hhccCC-----------------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc--------
Confidence 433210 023588999999999999999988 4899999999843221
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC-CCCCceEEEeC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA-QPGEFRVFNQF 379 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~~~ni~ 379 (479)
.+........ .....+...+|+|++++.++..+. ..|+ ++.+.
T Consensus 203 ------------------~~~~~~~~~~--------~~~~r~~~pedvA~~~~~l~s~~~~~tG~--~i~~d 246 (285)
T 3sc4_A 203 ------------------AAVQNLLGGD--------EAMARSRKPEVYADAAYVVLNKPSSYTGN--TLLCE 246 (285)
T ss_dssp ------------------HHHHHHHTSC--------CCCTTCBCTHHHHHHHHHHHTSCTTCCSC--EEEHH
T ss_pred ------------------HHHHhhcccc--------ccccCCCCHHHHHHHHHHHhCCcccccce--EEEEc
Confidence 1122222211 123356789999999999998765 2333 55543
No 265
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.89 E-value=8.6e-22 Score=185.12 Aligned_cols=215 Identities=17% Similarity=0.141 Sum_probs=155.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+.. .+.++.++.+|++|
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~l~~-~~~~~~~~~~Dv~~ 67 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL----------------RALGDELTA-AGAKVHVLELDVAD 67 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHH-TTCCEEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHh-cCCcEEEEECCCCC
Confidence 5689999999999999999999999999999998864311 111112211 13578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v 233 (479)
+++++++++.. ++|+||||||...... ...+++++.+++++|+.|+.++++++.. .+ + +||++||...
T Consensus 68 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g-~iv~isS~~~ 145 (247)
T 2jah_A 68 RQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-G-TVVQMSSIAG 145 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C-EEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C-EEEEEccHHh
Confidence 99998887643 7999999999754322 2335567788999999999999988753 34 4 9999999654
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. +......|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 146 ~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----- 196 (247)
T 2jah_A 146 RV------------------------NVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI----- 196 (247)
T ss_dssp TC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC-----
T ss_pred cC------------------------CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc-----
Confidence 42 12336789999999999999998874 89999999999987742110
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA 368 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~ 368 (479)
............ + + ...+++.+|+|++++.++..+.
T Consensus 197 ----------~~~~~~~~~~~~----~----~----~~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 197 ----------THTATKEMYEQR----I----S----QIRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp ----------CCHHHHHHHHHH----T----T----TSCCBCHHHHHHHHHHHHHSCT
T ss_pred ----------cchhhHHHHHhc----c----c----ccCCCCHHHHHHHHHHHhCCCc
Confidence 000011111111 0 0 1125899999999999998653
No 266
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.89 E-value=1.1e-22 Score=189.92 Aligned_cols=207 Identities=13% Similarity=0.036 Sum_probs=154.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|+||||||+|+||.+++++|+++|++|++++|..... .....++.+|++|+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---------------------------~~~~~~~~~D~~~~ 54 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---------------------------ADSNILVDGNKNWT 54 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT---------------------------SSEEEECCTTSCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc---------------------------ccccEEEeCCCCCH
Confidence 478999999999999999999999999999999864310 01356778999999
Q ss_pred HHHHHHhhh-------cCCCEEEEcccccCccc--ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccccc
Q 011706 165 EFLSESFKS-------FEPDAVVHFGEQRSAPY--SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEY 234 (479)
Q Consensus 165 ~~~~~~~~~-------~~~D~Vih~A~~~~~~~--~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~ 234 (479)
++++++++. .++|+||||||...... ...+.+++...+++|+.|+.++++++...- ...+||++||...+
T Consensus 55 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 134 (236)
T 1ooe_A 55 EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM 134 (236)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc
Confidence 988877763 27999999999754322 223445678889999999999999987642 12399999997655
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC-----CceEEeecCeeecCCCCchhhhH
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-----IRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-----l~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
. +..+...|+.+|++.+.+++.++.+++ +++++++||.|.++.
T Consensus 135 ~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-------- 182 (236)
T 1ooe_A 135 G------------------------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------- 182 (236)
T ss_dssp S------------------------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH--------
T ss_pred c------------------------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc--------
Confidence 2 223468999999999999999988754 999999999997762
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC---CCCCceEEEeCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA---QPGEFRVFNQFT 380 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~~~~ni~~ 380 (479)
....... .....+++.+|+|++++.++..+. ..|+ ++++.+
T Consensus 183 -------------------~~~~~~~---------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~--~~~v~g 226 (236)
T 1ooe_A 183 -------------------NRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSRPSSGA--LLKITT 226 (236)
T ss_dssp -------------------HHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTC--EEEEEE
T ss_pred -------------------hhhcCCC---------ccccccCCHHHHHHHHHHHHcCCCccccccc--EEEEec
Confidence 1111111 112346788999999997774322 2355 787765
No 267
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.89 E-value=4.7e-22 Score=189.09 Aligned_cols=216 Identities=13% Similarity=0.066 Sum_probs=159.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKG---YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIG 159 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G---~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 159 (479)
.+++|+||||||+|+||.+++++|+++| ++|++++|..... +.+..+... +.++.++.+
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~-----------------~~~~~l~~~-~~~~~~~~~ 79 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-----------------KELEDLAKN-HSNIHILEI 79 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC-----------------HHHHHHHHH-CTTEEEEEC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh-----------------HHHHHhhcc-CCceEEEEe
Confidence 4578999999999999999999999999 9999999864321 011111111 357899999
Q ss_pred ccCChHHHHHHhhhc-------CCCEEEEcccccC-c-ccccccccccchhhhhhHHHHHHHHHHHHHc----------C
Q 011706 160 DICDFEFLSESFKSF-------EPDAVVHFGEQRS-A-PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----------R 220 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~-------~~D~Vih~A~~~~-~-~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----------g 220 (479)
|++|.++++++++.. ++|+||||||... . .....+.+++..++++|+.|+.++++++... +
T Consensus 80 Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~ 159 (267)
T 1sny_A 80 DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQ 159 (267)
T ss_dssp CTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred cCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccc
Confidence 999999998888743 5999999999764 2 1222344567788999999999999988553 2
Q ss_pred -----CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEe
Q 011706 221 -----QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDL 292 (479)
Q Consensus 221 -----~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~iv 292 (479)
.+ +||++||...+.... +..+...|+.+|++.+.+++.++.+ .|++++++
T Consensus 160 ~~~~~~~-~iv~isS~~~~~~~~---------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v 217 (267)
T 1sny_A 160 PMGVGRA-AIINMSSILGSIQGN---------------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSL 217 (267)
T ss_dssp CSSTTTC-EEEEECCGGGCSTTC---------------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred cccCCCc-eEEEEecccccccCC---------------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEe
Confidence 23 899999976654221 1124678999999999999999888 58999999
Q ss_pred ecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--C
Q 011706 293 NQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--P 370 (479)
Q Consensus 293 Rp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~ 370 (479)
|||.|..+... . ..++..+|+++.++.++..... .
T Consensus 218 ~Pg~v~t~~~~--------------------------------~-----------~~~~~~~~~a~~~~~~~~~~~~~~~ 254 (267)
T 1sny_A 218 HPGWVKTDMGG--------------------------------S-----------SAPLDVPTSTGQIVQTISKLGEKQN 254 (267)
T ss_dssp CCCSBCSTTTC--------------------------------T-----------TCSBCHHHHHHHHHHHHHHCCGGGT
T ss_pred CCcceecCCCC--------------------------------C-----------CCCCCHHHHHHHHHHHHHhcCcCCC
Confidence 99999765310 0 1347889999999999986433 3
Q ss_pred CCceEEEeCCCCc
Q 011706 371 GEFRVFNQFTEQF 383 (479)
Q Consensus 371 g~~~~~ni~~~~~ 383 (479)
|. .+++.++.+
T Consensus 255 G~--~~~~~g~~~ 265 (267)
T 1sny_A 255 GG--FVNYDGTPL 265 (267)
T ss_dssp TC--EECTTSCBC
T ss_pred Cc--EEccCCcCc
Confidence 44 666555443
No 268
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.89 E-value=4.6e-22 Score=191.17 Aligned_cols=207 Identities=14% Similarity=0.074 Sum_probs=152.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+........++.++.+|++|
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL----------------QKVVSHCLELGAASAHYIAGTMED 89 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHHTCSEEEEEECCTTC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHHHHhCCCceEEEeCCCCC
Confidence 5689999999999999999999999999999999864321 111111111222368899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEc-ccccCcccccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHF-GEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMGEY 234 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~-A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~v~ 234 (479)
.++++++++.. ++|+|||| ||.........+.+++..++++|+.|+.++++++... +.+ +||++||...+
T Consensus 90 ~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g-~iv~isS~~~~ 168 (286)
T 1xu9_A 90 MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNG-SIVVVSSLAGK 168 (286)
T ss_dssp HHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGT
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCC-EEEEECCcccc
Confidence 99888887643 79999999 5654333223355567788999999999999888542 234 99999997654
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-----CCceEEeecCeeecCCCCchhhhH
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-----GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
. +..+...|+.||++.+.+++.++.++ ++++++++||.|..+.
T Consensus 169 ~------------------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-------- 216 (286)
T 1xu9_A 169 V------------------------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------- 216 (286)
T ss_dssp S------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH--------
T ss_pred c------------------------CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh--------
Confidence 2 22346899999999999999988775 8999999999986541
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP 367 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 367 (479)
......+ .....+++++|+|++++.++...
T Consensus 217 -------------------~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 217 -------------------AMKAVSG---------IVHMQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp -------------------HHHHSCG---------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred -------------------HHHhccc---------cccCCCCCHHHHHHHHHHHHhcC
Confidence 1111111 11235689999999999999864
No 269
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.89 E-value=6e-22 Score=187.02 Aligned_cols=230 Identities=12% Similarity=0.054 Sum_probs=165.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++..... ..+....+.. .+.++.++.+|++
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---------------~~~~~~~~~~-~~~~~~~~~~D~~ 67 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE---------------AEETVYEIQS-NGGSAFSIGANLE 67 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHH---------------HHHHHHHHHH-TTCEEEEEECCTT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHH---------------HHHHHHHHHh-cCCceEEEecCcC
Confidence 35789999999999999999999999999999875543211 1111222221 2457889999999
Q ss_pred ChHHHHHHhhhc-----------CCCEEEEcccccCcccc-cccccccchhhhhhHHHHHHHHHHHHHc--CCcceEEEe
Q 011706 163 DFEFLSESFKSF-----------EPDAVVHFGEQRSAPYS-MIDRSRAVFTQHNNVIGTLNVLFAMKEF--RQECHLVKL 228 (479)
Q Consensus 163 d~~~~~~~~~~~-----------~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--g~~~~~V~~ 228 (479)
|.++++++++.. ++|+||||||....... ..+.+++..++++|+.|+.++++++... +. .+||++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~i 146 (255)
T 3icc_A 68 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINI 146 (255)
T ss_dssp SHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEE
T ss_pred CHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC-CEEEEe
Confidence 998888877642 29999999997643322 2355567888999999999999999764 23 389999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCch
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~ 305 (479)
||...+. +......|+.||++.+.+++.++.++ |+++++++||.|..+.....
T Consensus 147 sS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 202 (255)
T 3icc_A 147 SSAATRI------------------------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL 202 (255)
T ss_dssp CCGGGTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT
T ss_pred CChhhcc------------------------CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh
Confidence 9965542 22336899999999999999999885 89999999999988754321
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. .. ..+....... .....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 203 ~---------------~~--~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~~tG~--~i~vdgG 252 (255)
T 3icc_A 203 L---------------SD--PMMKQYATTI---------SAFNRLGEVEDIADTAAFLASPDSRWVTGQ--LIDVSGG 252 (255)
T ss_dssp T---------------TS--HHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSC--EEEESSS
T ss_pred c---------------cc--HHHHHhhhcc---------CCcCCCCCHHHHHHHHHHHhCcccCCccCC--EEEecCC
Confidence 0 00 0111111111 1234578899999999999865433 455 9999875
No 270
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5.7e-22 Score=187.13 Aligned_cols=229 Identities=13% Similarity=-0.002 Sum_probs=160.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+|++|||||+|+||.+++++|+++| +.|++++|.... ++...+..+.++.++.+|++|
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~--------------------~~~~~~~~~~~~~~~~~Dv~~ 61 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP--------------------LKKLKEKYGDRFFYVVGDITE 61 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHH--------------------HHHHHHHHGGGEEEEESCTTS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHH--------------------HHHHHHHhCCceEEEECCCCC
Confidence 6899999999999999999999985 688888775431 111111113578999999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeeccc
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMG 232 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~ 232 (479)
.++++++++.. ++|+||||||.... +....+++++.+++++|+.|+.++++++ ++.+ + +||++||..
T Consensus 62 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g-~iv~isS~~ 139 (254)
T 3kzv_A 62 DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-G-NVVFVSSDA 139 (254)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C-EEEEECCSC
T ss_pred HHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C-eEEEEcCch
Confidence 99998888754 79999999997543 2233456678889999999999999988 4444 4 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-CCceEEeecCeeecCCCCchhhhHhh
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
.+. +..+...|+.||++.+.+++.++.++ |+++++++||.|..+......
T Consensus 140 ~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~----- 190 (254)
T 3kzv_A 140 CNM------------------------YFSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIR----- 190 (254)
T ss_dssp CCC------------------------SSCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCC-----
T ss_pred hcc------------------------CCCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhh-----
Confidence 442 22346899999999999999999886 899999999999887643210
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC---CCCCceEEEeCCC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA---QPGEFRVFNQFTE 381 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~~~~ni~~~ 381 (479)
....+... -.......... .....+.+++|+|++++.++.... ..|+ ++++.++
T Consensus 191 -~~~~~~~~----~~~~~~~~~~~---------~~~~r~~~p~dva~~v~~L~s~~~~~~itG~--~i~vdg~ 247 (254)
T 3kzv_A 191 -ENVGPSSM----SAEQLKMFRGL---------KENNQLLDSSVPATVYAKLALHGIPDGVNGQ--YLSYNDP 247 (254)
T ss_dssp -CCCCTTTS----CHHHHHHHHHH---------HTTC----CHHHHHHHHHHHHHCCCGGGTTC--EEETTCG
T ss_pred -cccCcccc----CHHHHHHHHHH---------HhcCCcCCcccHHHHHHHHHhhcccCCCCcc--EEEecCc
Confidence 00000000 01111212111 112357889999999999988663 3455 8988774
No 271
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.89 E-value=4.9e-22 Score=186.65 Aligned_cols=234 Identities=13% Similarity=0.016 Sum_probs=166.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+++||.++++.|+++|++|++++|..... +.++...+ .+.++.++.+|++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~-----------------~~~~~~~~-~~~~~~~~~~Dv~ 65 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG-----------------AFLDALAQ-RQPRATYLPVELQ 65 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH-----------------HHHHHHHH-HCTTCEEEECCTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH-----------------HHHHHHHh-cCCCEEEEEeecC
Confidence 57899999999999999999999999999999999864321 11111111 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEeeccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKLGTMGEY 234 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~SS~~v~ 234 (479)
|++++++++++. ++|++|||||+......+.+.++|.+++++|+.|++++.+++..+ +.+ +||++||..-.
T Consensus 66 ~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G-~IVnisS~~~~ 144 (258)
T 4gkb_A 66 DDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRG-AIVNISSKTAV 144 (258)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCTHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-eEEEEeehhhc
Confidence 999888777643 799999999986544444566789999999999999998887432 224 99999995433
Q ss_pred -cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHh
Q 011706 235 -GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 235 -g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+. .....|+.||++.+.+.+.++.++ ||+++.|.||.|--|......
T Consensus 145 ~~~-------------------------~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~---- 195 (258)
T 4gkb_A 145 TGQ-------------------------GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWI---- 195 (258)
T ss_dssp HCC-------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--------
T ss_pred cCC-------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhh----
Confidence 22 236789999999999999999885 899999999998766432100
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
.. ..........+....|+ -+-+...+|+|.+++.++......-.++++++.|+
T Consensus 196 --~~-------~~~~~~~~~~~~~~~pl--------g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG 249 (258)
T 4gkb_A 196 --AT-------FEDPEAKLAEIAAKVPL--------GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG 249 (258)
T ss_dssp ----------------CHHHHHHTTCTT--------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --hc-------ccChHHHHHHHHhcCCC--------CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence 00 00001112222222221 02467789999999999876544322349998775
No 272
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.89 E-value=2.8e-22 Score=192.15 Aligned_cols=232 Identities=13% Similarity=0.096 Sum_probs=161.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|.... ++......+.++.++.+|++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--------------------~~~~~~~~~~~~~~~~~Dv~ 61 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAER--------------------LRELEVAHGGNAVGVVGDVR 61 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHHTBTTEEEEECCTT
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHH--------------------HHHHHHHcCCcEEEEEcCCC
Confidence 3578999999999999999999999999999999885432 11111122457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCcccccc------cccccchhhhhhHHHHHHHHHHHHHc---CCcceEEEe
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPYSMI------DRSRAVFTQHNNVIGTLNVLFAMKEF---RQECHLVKL 228 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~~---g~~~~~V~~ 228 (479)
|.++++++++.. ++|+||||||......... ..+++.+++++|+.|+.++++++... +.+ +||++
T Consensus 62 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g-~iv~i 140 (281)
T 3zv4_A 62 SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRG-SVVFT 140 (281)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-eEEEE
Confidence 999988887654 7999999999754322211 12346778999999999999988542 223 89999
Q ss_pred eccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhC--CceEEeecCeeecCCCCchh
Q 011706 229 GTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 229 SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ivRp~~v~Gp~~~~~~ 306 (479)
||...+. +......|+.||++.+.+++.++.+++ ++++++.||.|..+......
T Consensus 141 sS~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~ 196 (281)
T 3zv4_A 141 ISNAGFY------------------------PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSS 196 (281)
T ss_dssp CCGGGTS------------------------SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTT
T ss_pred ecchhcc------------------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccc
Confidence 9965442 223467899999999999999999864 99999999999876432110
Q ss_pred hhHhhhcccCCCCcccchHH--HHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhC-CCC--CCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALN--RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIAN-PAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~-~~~--~g~~~~~ni~~~ 381 (479)
. +.....+. .+...+... .....+...+|+|++++.++.. ... .|+ ++++.++
T Consensus 197 ~-----------~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~fL~s~~~~~~itG~--~i~vdGG 254 (281)
T 3zv4_A 197 L-----------GLSEQSISSVPLADMLKSV---------LPIGRMPALEEYTGAYVFFATRGDSLPATGA--LLNYDGG 254 (281)
T ss_dssp C-----------C--------CCHHHHHHHT---------CTTSSCCCGGGGSHHHHHHHSTTTSTTCSSC--EEEESSS
T ss_pred c-----------ccccccccchhHHHHHHhc---------CCCCCCCCHHHHHHHHHHhhcccccccccCc--EEEECCC
Confidence 0 00000000 011111111 1234578899999999999983 332 455 9999875
No 273
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.89 E-value=6.1e-22 Score=186.93 Aligned_cols=234 Identities=16% Similarity=0.031 Sum_probs=165.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.++||++|||||+++||.++++.|+++|++|++.+|.... +.+..++ .+.++..+.+|++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~----------------l~~~~~~----~g~~~~~~~~Dv~ 85 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV----------------LDAAIAE----IGGGAVGIQADSA 85 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----------------HHHHHHH----HCTTCEEEECCTT
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH----------------HHHHHHH----cCCCeEEEEecCC
Confidence 4789999999999999999999999999999999986431 1112222 2457889999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYG 235 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g 235 (479)
|+++++++++.. ++|++|||||...... ...++++|++++++|+.|++++.+++...- ...+||++||.....
T Consensus 86 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~ 165 (273)
T 4fgs_A 86 NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST 165 (273)
T ss_dssp CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc
Confidence 999988887653 6999999999865433 344777899999999999999999886531 123899999854331
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhh
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+......|+.||++...+.+.++.++ ||+++.|.||.|.-|......
T Consensus 166 ------------------------~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~------ 215 (273)
T 4fgs_A 166 ------------------------GTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELA------ 215 (273)
T ss_dssp ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-------------
T ss_pred ------------------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhh------
Confidence 22236789999999999999999985 799999999998766422100
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
+.....-..+...+....| ..-+...+|+|.+++.++......-.++++.+.|+
T Consensus 216 ------~~~~~~~~~~~~~~~~~~P---------lgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG 269 (273)
T 4fgs_A 216 ------GKDPVQQQGLLNALAAQVP---------MGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGG 269 (273)
T ss_dssp --------CHHHHHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ------ccCchhhHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence 0000001122333332222 12356789999999999976544322338888765
No 274
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.89 E-value=1.4e-22 Score=191.69 Aligned_cols=232 Identities=10% Similarity=-0.006 Sum_probs=149.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+|+||.+++++|+++|++|++++|..... . . . +.+|++|.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-----------------------~----~--~-~~~Dl~~~~ 50 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------------I----A--D-LSTAEGRKQ 50 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------------------E----C--C-TTSHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhh-----------------------c----c--c-cccCCCCHH
Confidence 46899999999999999999999999999998854310 0 0 1 578999999
Q ss_pred HHHHHhhhc--CCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccccccCCCC
Q 011706 166 FLSESFKSF--EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGEYGTPNI 239 (479)
Q Consensus 166 ~~~~~~~~~--~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v~g~~~~ 239 (479)
+++++++.. ++|+||||||..... ..+..++++|+.|+.++++++.. .+.+ +||++||...+..+..
T Consensus 51 ~v~~~~~~~~~~id~lv~~Ag~~~~~------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~~~ 123 (257)
T 1fjh_A 51 AIADVLAKCSKGMDGLVLCAGLGPQT------KVLGNVVSVNYFGATELMDAFLPALKKGHQP-AAVVISSVASAHLAFD 123 (257)
T ss_dssp HHHHHHTTCTTCCSEEEECCCCCTTC------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC-EEEEECCGGGGSSCGG
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCCc------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCc-EEEEECChhhhccccc
Confidence 999999754 679999999975411 12567899999999999998863 3445 9999999877632211
Q ss_pred -CCcCCceeecCCCCC---CCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhhh
Q 011706 240 -DIEEGYITINHNGRT---DTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEELC 312 (479)
Q Consensus 240 -~~~e~~~~~~~~~~~---~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~~ 312 (479)
+..+..+........ .....+..+...|+.||++.+.+++.++.+ .|+++++++||.|.++......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------ 197 (257)
T 1fjh_A 124 KNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL------ 197 (257)
T ss_dssp GCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------
T ss_pred cchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhc------
Confidence 000000000000000 000012224678999999999999998887 4899999999999887532100
Q ss_pred cccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 313 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
........... + ......+.+++|+|++++.++..+.. .|+ ++++.++
T Consensus 198 ------------~~~~~~~~~~~-----~--~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~--~~~vdgG 247 (257)
T 1fjh_A 198 ------------QDPRYGESIAK-----F--VPPMGRRAEPSEMASVIAFLMSPAASYVHGA--QIVIDGG 247 (257)
T ss_dssp ----------------------------C--CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred ------------cchhHHHHHHh-----c--ccccCCCCCHHHHHHHHHHHhCchhcCCcCC--EEEECCC
Confidence 00000000000 0 11223578999999999999876532 455 8998875
No 275
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.88 E-value=7.1e-22 Score=185.64 Aligned_cols=217 Identities=14% Similarity=0.075 Sum_probs=158.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc-
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI- 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl- 161 (479)
.+++|+||||||+|+||.+++++|+++|++|++++|..... .+..+.+......++.++.+|+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~d~d 74 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASL----------------AEVSDQIKSAGQPQPLIIALNLE 74 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHTTSCCCEEEECCTT
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHH----------------HHHHHHHHhcCCCCceEEEeccc
Confidence 46789999999999999999999999999999999865421 1222223223335677788777
Q ss_pred -CChHHHHHHhhhc-----CCCEEEEcccccCcc--cccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEee
Q 011706 162 -CDFEFLSESFKSF-----EPDAVVHFGEQRSAP--YSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLG 229 (479)
Q Consensus 162 -~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~S 229 (479)
+|.+++.++++.. ++|+||||||..... ....+.+++..++++|+.|+.++++++. +.+.+ +||++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~iv~is 153 (247)
T 3i1j_A 75 NATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDA-SIAFTS 153 (247)
T ss_dssp TCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSE-EEEEEC
T ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-eEEEEc
Confidence 8998888877643 799999999975432 2333566788899999999999999884 33444 999999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh----CCceEEeecCeeecCCCCch
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGVRTDET 305 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gl~~~ivRp~~v~Gp~~~~~ 305 (479)
|...+. +..+...|+.+|++.+.+++.++.++ |++++++.||.|..+.
T Consensus 154 S~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~---- 205 (247)
T 3i1j_A 154 SSVGRK------------------------GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM---- 205 (247)
T ss_dssp CGGGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH----
T ss_pred chhhcC------------------------CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc----
Confidence 965432 22346899999999999999999884 6899999998885541
Q ss_pred hhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEe
Q 011706 306 AMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQ 378 (479)
Q Consensus 306 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni 378 (479)
....... .....+...+|++++++.++..... .|+ ++++
T Consensus 206 -----------------------~~~~~~~---------~~~~~~~~p~dva~~~~~l~s~~~~~itG~--~i~~ 246 (247)
T 3i1j_A 206 -----------------------RAQAYPD---------ENPLNNPAPEDIMPVYLYLMGPDSTGINGQ--ALNA 246 (247)
T ss_dssp -----------------------HHHHSTT---------SCGGGSCCGGGGTHHHHHHHSGGGTTCCSC--EEEC
T ss_pred -----------------------chhcccc---------cCccCCCCHHHHHHHHHHHhCchhccccCe--eecC
Confidence 1111111 1123467899999999999975433 344 6664
No 276
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.88 E-value=5.7e-22 Score=184.25 Aligned_cols=203 Identities=16% Similarity=0.135 Sum_probs=148.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
||+||||||+|+||.+++++|+++|++|++++|.... ++......+.++.++.+|++|.+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--------------------~~~~~~~~~~~~~~~~~D~~~~~ 60 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESK--------------------LSTVTNCLSNNVGYRARDLASHQ 60 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH--------------------HHHHHHTCSSCCCEEECCTTCHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH--------------------HHHHHHHHhhccCeEeecCCCHH
Confidence 4789999999999999999999999999999986432 11111112457889999999999
Q ss_pred HHHHHhhhc--CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcC--CcceEEEeeccccccCCCCC
Q 011706 166 FLSESFKSF--EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR--QECHLVKLGTMGEYGTPNID 240 (479)
Q Consensus 166 ~~~~~~~~~--~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g--~~~~~V~~SS~~v~g~~~~~ 240 (479)
+++++++.. .+|+||||||...... ...+++++.+++++|+.|+.++++++.... .+.+||++||...+.
T Consensus 61 ~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----- 135 (230)
T 3guy_A 61 EVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ----- 135 (230)
T ss_dssp HHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS-----
T ss_pred HHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC-----
Confidence 999999853 2599999999765433 233566788899999999999999886542 112899999976552
Q ss_pred CcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhcccCC
Q 011706 241 IEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCNRLDY 317 (479)
Q Consensus 241 ~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~ 317 (479)
+......|+.||++.+.+++.++.++ |++++.++||.|..+...
T Consensus 136 -------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------- 182 (230)
T 3guy_A 136 -------------------PKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE-------------- 182 (230)
T ss_dssp -------------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------
T ss_pred -------------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH--------------
Confidence 22346899999999999999999986 799999999998765321
Q ss_pred CCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC
Q 011706 318 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA 368 (479)
Q Consensus 318 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~ 368 (479)
... . ......+++++|+|++++.++..+.
T Consensus 183 -------------~~~--~-------~~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 183 -------------TSG--K-------SLDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp --------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred -------------hcC--C-------CCCcccCCCHHHHHHHHHHHHhCcC
Confidence 000 0 0123467899999999999987544
No 277
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.88 E-value=3.1e-21 Score=189.80 Aligned_cols=217 Identities=15% Similarity=0.045 Sum_probs=157.5
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|+||||||+|+||.+++++|+++|++|++++|........ .. .+.+..+.+.. .+.++.++.+|+
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l------~~---~l~~~~~~~~~-~g~~~~~~~~Dv 110 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKL------LG---TIYTAAEEIEA-VGGKALPCIVDV 110 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSS------CC---CHHHHHHHHHH-TTCEEEEEECCT
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhh------HH---HHHHHHHHHHh-cCCeEEEEEccC
Confidence 356799999999999999999999999999999999865421110 00 11112222222 245789999999
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~ 231 (479)
+|+++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+.+ +||++||.
T Consensus 111 ~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g-~IV~iSS~ 189 (346)
T 3kvo_A 111 RDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVA-HILNISPP 189 (346)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSC-EEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCC-EEEEECCH
Confidence 9999998888754 7999999999765432 2335567788999999999999999854 3444 99999996
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh--CCceEEeecCeeecCCCCchhhhH
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
..+... +......|+.||++.+.+++.++.++ |++++++.||.+...
T Consensus 190 ~~~~~~----------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T--------- 238 (346)
T 3kvo_A 190 LNLNPV----------------------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT--------- 238 (346)
T ss_dssp CCCCGG----------------------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC---------
T ss_pred HHcCCC----------------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc---------
Confidence 543210 12346899999999999999999985 799999999864332
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhC
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIAN 366 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 366 (479)
.+...+ .+. .....+..++|+|++++.++..
T Consensus 239 -----------------~~~~~~-~~~--------~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 239 -----------------AAMDML-GGP--------GIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp -----------------HHHHHH-CC----------CGGGCBCTHHHHHHHHHHHTS
T ss_pred -----------------HHHHhh-ccc--------cccccCCCHHHHHHHHHHHHhc
Confidence 112221 111 1233567899999999999987
No 278
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.88 E-value=5.2e-22 Score=185.91 Aligned_cols=210 Identities=11% Similarity=0.009 Sum_probs=155.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.++|+||||||+|+||.+++++|+++|++|++++|..... .....++.+|++|
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------------------------~~~~~~~~~D~~~ 57 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------------------------ASASVIVKMTDSF 57 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------------------------SSEEEECCCCSCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc---------------------------cCCcEEEEcCCCC
Confidence 3578999999999999999999999999999999854310 0135677899999
Q ss_pred hHHHHHHhhh-------cCCCEEEEcccccCccc--ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecccc
Q 011706 164 FEFLSESFKS-------FEPDAVVHFGEQRSAPY--SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMGE 233 (479)
Q Consensus 164 ~~~~~~~~~~-------~~~D~Vih~A~~~~~~~--~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v 233 (479)
+++++++++. .++|+||||||...... ...+.+++.+.+++|+.|+.++++++...- .+.+||++||...
T Consensus 58 ~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 137 (241)
T 1dhr_A 58 TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA 137 (241)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH
Confidence 9988887764 27999999999754322 223455678889999999999999997641 1239999999765
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-----CCceEEeecCeeecCCCCchhhh
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-----GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
+. +..+...|+.+|++.+.+++.++.++ |+++++++||.|-.+.
T Consensus 138 ~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~------- 186 (241)
T 1dhr_A 138 LD------------------------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM------- 186 (241)
T ss_dssp GS------------------------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------
T ss_pred cc------------------------CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-------
Confidence 53 22346889999999999999998764 5999999999886541
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFT 380 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~ 380 (479)
....... .....+++.+|+|++++.++......-.++++++.+
T Consensus 187 --------------------~~~~~~~---------~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g 229 (241)
T 1dhr_A 187 --------------------NRKSMPE---------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT 229 (241)
T ss_dssp --------------------HHHHSTT---------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred --------------------ccccCcc---------hhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence 1111111 112346788999999999997654432223888765
No 279
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.88 E-value=1.2e-21 Score=187.14 Aligned_cols=226 Identities=15% Similarity=0.044 Sum_probs=158.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|+||.+++++|+++|++|++++|......... . .+.+..+.... .+.++.++.+|++
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~------~---~~~~~~~~~~~-~~~~~~~~~~Dv~ 72 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLP------G---TIHSAAAAVNA-AGGQGLALKCDIR 72 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSC------C---CHHHHHHHHHH-HTSEEEEEECCTT
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhH------H---HHHHHHHHHHh-cCCeEEEEeCCCC
Confidence 467899999999999999999999999999999998654211100 0 01111111111 2457899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~ 232 (479)
|.++++++++.. ++|+||||||...... ...+.+++..++++|+.|+.++++++.. .+.+ +||++||..
T Consensus 73 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~ 151 (274)
T 3e03_A 73 EEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP-HILTLAPPP 151 (274)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC-EEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc-eEEEECChH
Confidence 999998887754 7999999999865433 2335567888999999999999998854 3444 999999965
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhH
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHE 309 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~ 309 (479)
.+... +......|+.||++.+.+++.++.++ |++++++.||.+....
T Consensus 152 ~~~~~----------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~-------- 201 (274)
T 3e03_A 152 SLNPA----------------------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD-------- 201 (274)
T ss_dssp CCCHH----------------------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------
T ss_pred hcCCC----------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc--------
Confidence 43210 01225789999999999999999885 7999999998543221
Q ss_pred hhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEE
Q 011706 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFN 377 (479)
Q Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~n 377 (479)
+ . ....+ .....+...+|+|++++.++......-.+++++
T Consensus 202 ---------------~---~-~~~~~---------~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~ 241 (274)
T 3e03_A 202 ---------------A---I-NMLPG---------VDAAACRRPEIMADAAHAVLTREAAGFHGQFLI 241 (274)
T ss_dssp -------------------------C---------CCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred ---------------h---h-hhccc---------ccccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence 0 0 01111 112346789999999999998655432223553
No 280
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.88 E-value=1.2e-21 Score=186.93 Aligned_cols=223 Identities=13% Similarity=0.057 Sum_probs=155.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSN-KGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~-~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
++|+||||||+|+||.+++++|++ +|++|++++|..... .+..+.+... +.++.++.+|++|
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~----------------~~~~~~l~~~-~~~~~~~~~Dl~~ 65 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRG----------------QAAVQQLQAE-GLSPRFHQLDIDD 65 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHH----------------HHHHHHHHHT-TCCCEEEECCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHH----------------HHHHHHHHhc-CCeeEEEECCCCC
Confidence 578999999999999999999999 999999999864321 1111122111 3578899999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccCccccccc-ccccchhhhhhHHHHHHHHHHHHHcCC-cceEEEeeccccccC
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRSAPYSMID-RSRAVFTQHNNVIGTLNVLFAMKEFRQ-ECHLVKLGTMGEYGT 236 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~-~~~~~~~~~~Nv~g~~~ll~~a~~~g~-~~~~V~~SS~~v~g~ 236 (479)
.++++++++.. ++|+||||||.......... .+++..++++|+.|+.++++++..... ..+||++||...+..
T Consensus 66 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~ 145 (276)
T 1wma_A 66 LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRA 145 (276)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcc
Confidence 99998888754 79999999997643322212 345678899999999999999987521 239999999655521
Q ss_pred -CC-----------CCCcCCceeecC-----CCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH-------hCCceEEe
Q 011706 237 -PN-----------IDIEEGYITINH-----NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA-------WGIRATDL 292 (479)
Q Consensus 237 -~~-----------~~~~e~~~~~~~-----~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~gl~~~iv 292 (479)
.. .++.|+.+.... .......+.+..|...|+.||++.|.+++.++.+ .|++++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v 225 (276)
T 1wma_A 146 LKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC 225 (276)
T ss_dssp HHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEE
T ss_pred cccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEe
Confidence 10 011221100000 0000000112234589999999999999998877 48999999
Q ss_pred ecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCC
Q 011706 293 NQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANP 367 (479)
Q Consensus 293 Rp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 367 (479)
+||.|.++... . ..+.+++|+|++++.++..+
T Consensus 226 ~PG~v~t~~~~-------------------------------~------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 226 CPGWVRTDMAG-------------------------------P------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp ECCSBCSTTTC-------------------------------T------------TCSBCHHHHTHHHHHHHSCC
T ss_pred cCCccccCcCC-------------------------------c------------cccCChhHhhhhHhhhhcCc
Confidence 99999876311 0 13689999999999999855
No 281
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.88 E-value=2.1e-21 Score=187.04 Aligned_cols=225 Identities=12% Similarity=0.046 Sum_probs=161.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEe-cccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVD-SLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~d-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|++|||||+|+||.+++++|+++|++|++++ |..... .+..+.+....+.++.++.+|++
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~Dl~ 70 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEA----------------NALSATLNARRPNSAITVQADLS 70 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------------HHHHHHHHHHSTTCEEEEECCCS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHH----------------HHHHHHHhhhcCCeeEEEEeecC
Confidence 5689999999999999999999999999999998 654311 11111221112357899999999
Q ss_pred ChH-----------------HHHHHhhhc-----CCCEEEEcccccCccc-cccc--------------ccccchhhhhh
Q 011706 163 DFE-----------------FLSESFKSF-----EPDAVVHFGEQRSAPY-SMID--------------RSRAVFTQHNN 205 (479)
Q Consensus 163 d~~-----------------~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~--------------~~~~~~~~~~N 205 (479)
|.+ +++++++.. ++|+||||||...... ...+ ++++..++++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N 150 (291)
T 1e7w_A 71 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSN 150 (291)
T ss_dssp SSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHH
T ss_pred CcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHH
Confidence 998 888887754 7999999999764322 1223 55678899999
Q ss_pred HHHHHHHHHHHHH----cC------CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHH
Q 011706 206 VIGTLNVLFAMKE----FR------QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDS 275 (479)
Q Consensus 206 v~g~~~ll~~a~~----~g------~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E 275 (479)
+.|+.++++++.. .+ .+ +||++||...+. +......|+.||++.+
T Consensus 151 ~~g~~~l~~~~~~~m~~~~~~~~~~~g-~Iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~ 205 (291)
T 1e7w_A 151 AIAPYFLIKAFAHRVAGTPAKHRGTNY-SIINMVDAMTNQ------------------------PLLGYTIYTMAKGALE 205 (291)
T ss_dssp THHHHHHHHHHHHHHHTSCGGGSCSCE-EEEEECCTTTTS------------------------CCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCc-EEEEEechhhcC------------------------CCCCCchhHHHHHHHH
Confidence 9999999998864 23 34 999999965442 2234689999999999
Q ss_pred HHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCcee-ccc
Q 011706 276 HNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTR-GYL 351 (479)
Q Consensus 276 ~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 351 (479)
.+++.++.++ |+++++++||.|..+. . . . ..+...+....+ .. .+.
T Consensus 206 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~---------------~---~~~~~~~~~~~p---------~~~r~~ 255 (291)
T 1e7w_A 206 GLTRSAALELAPLQIRVNGVGPGLSVLVD-D--M---------------P---PAVWEGHRSKVP---------LYQRDS 255 (291)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--S---------------C---HHHHHHHHTTCT---------TTTSCB
T ss_pred HHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--C---------------C---HHHHHHHHhhCC---------CCCCCC
Confidence 9999999884 8999999999986553 1 0 0 111222222211 11 367
Q ss_pred cHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 352 DIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 352 ~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
..+|+|++++.++..... .|+ ++++.++
T Consensus 256 ~pedvA~~v~~l~s~~~~~itG~--~i~vdGG 285 (291)
T 1e7w_A 256 SAAEVSDVVIFLCSSKAKYITGT--CVKVDGG 285 (291)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred CHHHHHHHHHHHhCCcccCccCc--EEEECCC
Confidence 899999999999975433 454 8888875
No 282
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.88 E-value=1.8e-21 Score=185.37 Aligned_cols=173 Identities=16% Similarity=0.138 Sum_probs=131.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+... .++.++.+|++|.++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~----------------~~~~~~~~~~--~~~~~~~~Dv~d~~~ 83 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERL----------------QALAGELSAK--TRVLPLTLDVRDRAA 83 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHTTT--SCEEEEECCTTCHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHhhcC--CcEEEEEcCCCCHHH
Confidence 8999999999999999999999999999998864311 1111112111 368899999999999
Q ss_pred HHHHhhhc-----CCCEEEEcccccCc--ccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecccccc
Q 011706 167 LSESFKSF-----EPDAVVHFGEQRSA--PYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGEYG 235 (479)
Q Consensus 167 ~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v~g 235 (479)
++++++.. ++|+||||||.... +....+.+++..++++|+.|+.++++++. +.+.+.+||++||...+.
T Consensus 84 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~ 163 (272)
T 2nwq_A 84 MSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW 163 (272)
T ss_dssp HHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc
Confidence 99998753 57999999997542 22334556788899999999988887774 333222899999975542
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCC
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVR 301 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~ 301 (479)
+......|+.+|++.+.+++.++.++ |+++++++||.|..+.
T Consensus 164 ------------------------~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 164 ------------------------PYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp ------------------------CCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred ------------------------CCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 22336789999999999999998764 7999999999998774
No 283
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.88 E-value=6.7e-21 Score=179.81 Aligned_cols=231 Identities=15% Similarity=0.137 Sum_probs=166.2
Q ss_pred CCCCcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 83 PSKAKRVMIIGGDG--YCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 83 ~~~~~~vLVtGatG--~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
.+++|++|||||+| +||.+++++|+++|++|++.+|.... +.+..+...+..+.++.++.+|
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~----------------~~~~~~~~~~~~~~~~~~~~~D 66 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERS----------------RKELEKLLEQLNQPEAHLYQID 66 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGG----------------HHHHHHHHGGGTCSSCEEEECC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHH----------------HHHHHHHHHhcCCCcEEEEEcc
Confidence 46899999999876 99999999999999999999986542 1222333344445678999999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEcccccCccc-----ccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEee
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-----SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLG 229 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-----~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~S 229 (479)
++|+++++++++.. ++|++|||||...... .....+++...+++|+.++..+.+++...- .+.+||++|
T Consensus 67 v~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 67 VQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 99999888877643 6999999999754321 223445567788999999999988886532 224899999
Q ss_pred ccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchh
Q 011706 230 TMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 230 S~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
|..-.. +......|+.||++.+.+.+.++.++ ||+++.|.||.|--+.....
T Consensus 147 S~~~~~------------------------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~- 201 (256)
T 4fs3_A 147 YLGGEF------------------------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV- 201 (256)
T ss_dssp CGGGTS------------------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-
T ss_pred cccccc------------------------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc-
Confidence 954221 22346899999999999999999985 89999999998865532210
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.....+...+....|+ .-+...+|+|.+++.++..... .|+ ++.+.++
T Consensus 202 ----------------~~~~~~~~~~~~~~Pl---------~R~g~peevA~~v~fL~Sd~a~~iTG~--~i~VDGG 251 (256)
T 4fs3_A 202 ----------------GGFNTILKEIKERAPL---------KRNVDQVEVGKTAAYLLSDLSSGVTGE--NIHVDSG 251 (256)
T ss_dssp ----------------TTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSC--EEEESTT
T ss_pred ----------------cCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCccCC--EEEECcC
Confidence 0112333333333221 2356789999999999875443 455 8888765
No 284
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.88 E-value=3.9e-21 Score=181.05 Aligned_cols=234 Identities=14% Similarity=0.071 Sum_probs=161.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.++||++|||||+++||.+++++|+++|++|++.+|..... .....++.+|++
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------------------------~~~~~~~~~Dv~ 60 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---------------------------LPEELFVEADLT 60 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------------------SCTTTEEECCTT
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------------------------CCcEEEEEcCCC
Confidence 57899999999999999999999999999999998853210 123457899999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEcccccCc---ccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeec
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQRSA---PYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~~~---~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS 230 (479)
|+++++++++.. ++|++|||||.... +....++++|.+++++|+.|+.++.+++. +.+.+ +||++||
T Consensus 61 ~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G-~Iv~isS 139 (261)
T 4h15_A 61 TKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSG-VVVHVTS 139 (261)
T ss_dssp SHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCc-eEEEEEe
Confidence 999888877643 69999999997543 22344667889999999999999988774 34555 9999999
Q ss_pred cccc-cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchh
Q 011706 231 MGEY-GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 231 ~~v~-g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
.... +.+ .....|+.||++.+.+.+.++.++ |++++.|.||.|--|.....
T Consensus 140 ~~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~- 194 (261)
T 4h15_A 140 IQRVLPLP------------------------ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRL- 194 (261)
T ss_dssp GGGTSCCT------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-
T ss_pred hhhccCCC------------------------CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhh-
Confidence 5432 111 235789999999999999999984 89999999998865421100
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQ 382 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~ 382 (479)
...+... .+........++.......| ..-+...+|+|++++.++......-.++++++.|+.
T Consensus 195 -~~~~~~~---~~~~~~~~~~~~~~~~~~~P---------lgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 195 -AERLAKQ---AGTDLEGGKKIIMDGLGGIP---------LGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp -HHHHHHH---TTCCHHHHHHHHHHHTTCCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred -hHHHHHh---hccchhhHHHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 0000000 00000001122222222222 234678999999999998654442222399998764
No 285
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.88 E-value=1.6e-21 Score=185.76 Aligned_cols=239 Identities=13% Similarity=0.061 Sum_probs=162.3
Q ss_pred CCCcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGG--DGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGa--tG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
+++|+|||||| +|+||.+++++|+++|++|++++|..... .+...+..+.++.++.+|+
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~Dv 65 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL-------------------IQRITDRLPAKAPLLELDV 65 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH-------------------HHHHHTTSSSCCCEEECCT
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH-------------------HHHHHHhcCCCceEEEccC
Confidence 56899999999 99999999999999999999998854310 1111111134688999999
Q ss_pred CChHHHHHHhhhc--------CCCEEEEcccccCc------ccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEE
Q 011706 162 CDFEFLSESFKSF--------EPDAVVHFGEQRSA------PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLV 226 (479)
Q Consensus 162 ~d~~~~~~~~~~~--------~~D~Vih~A~~~~~------~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V 226 (479)
+|+++++++++.. ++|+||||||.... +....+.+++..++++|+.|+.++++++...- ...+||
T Consensus 66 ~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 145 (269)
T 2h7i_A 66 QNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIV 145 (269)
T ss_dssp TCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEE
Confidence 9999998888753 68999999997541 22333556778899999999999999997541 113999
Q ss_pred EeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCC
Q 011706 227 KLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTD 303 (479)
Q Consensus 227 ~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~ 303 (479)
++||...++. .....|+.||++.+.+++.++.++ |+++++++||.|..+...
T Consensus 146 ~iss~~~~~~-------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 200 (269)
T 2h7i_A 146 GMDFDPSRAM-------------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200 (269)
T ss_dssp EEECCCSSCC-------------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHH
T ss_pred EEcCcccccc-------------------------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhh
Confidence 9998654322 236789999999999999999885 899999999988654210
Q ss_pred chhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 304 ETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
...... ...........+...+....++ .+.+...+|+|++++.++......-.++++++.++
T Consensus 201 ------~~~~~~-~~~~~~~~~~~~~~~~~~~~p~--------~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 263 (269)
T 2h7i_A 201 ------AIVGGA-LGEEAGAQIQLLEEGWDQRAPI--------GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263 (269)
T ss_dssp ------HHHTTT-TCHHHHHHHHHHHHHHHHHCTT--------CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred ------cccccc-chhhHHHHHHHHHHhhhccCCc--------ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence 000000 0000000000111111111110 01367889999999999976544333358888775
No 286
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.87 E-value=6.7e-22 Score=185.62 Aligned_cols=212 Identities=16% Similarity=0.112 Sum_probs=137.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|+||||||+|+||.+++++|++ |+.|++++|.... .+...+ ..++.++.+|+++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~--------------------~~~~~~--~~~~~~~~~D~~~ 59 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEH--------------------LAALAE--IEGVEPIESDIVK 59 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHH--------------------HHHHHT--STTEEEEECCHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHH--------------------HHHHHh--hcCCcceecccch
Confidence 5689999999999999999999988 9999999875432 111111 1468899999988
Q ss_pred hHHH---HHHhhhc-CCCEEEEcccccCcccc-cccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeeccccc
Q 011706 164 FEFL---SESFKSF-EPDAVVHFGEQRSAPYS-MIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTMGEY 234 (479)
Q Consensus 164 ~~~~---~~~~~~~-~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~~v~ 234 (479)
.+.. .+.++.. ++|+||||||....... ..+++++..++++|+.|+.++++++.. .+ + +||++||...+
T Consensus 60 ~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g-~iv~isS~~~~ 137 (245)
T 3e9n_A 60 EVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-G-CVIYINSGAGN 137 (245)
T ss_dssp HHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C-EEEEEC-----
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C-eEEEEcCcccc
Confidence 7542 2233322 69999999997654322 225556788899999999988887743 33 4 89999997655
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCCCCchhhhHhh
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETAMHEEL 311 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~~~~~~~~~~~ 311 (479)
. +......|+.||++.+.+++.++.+ .|+++++++||.|.++....
T Consensus 138 ~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------- 186 (245)
T 3e9n_A 138 G------------------------PHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG------- 186 (245)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------
T ss_pred c------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-------
Confidence 3 2234689999999999999999987 48999999999998874221
Q ss_pred hcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeC
Q 011706 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQF 379 (479)
Q Consensus 312 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~ 379 (479)
+.... ........+++++|+|++++.+++.+.. + .++|+.
T Consensus 187 ----------------~~~~~---------~~~~~~~~~~~p~dvA~~i~~l~~~~~~-~--~~~~i~ 226 (245)
T 3e9n_A 187 ----------------LMDSQ---------GTNFRPEIYIEPKEIANAIRFVIDAGET-T--QITNVD 226 (245)
T ss_dssp ----------------------------------CCGGGSCHHHHHHHHHHHHTSCTT-E--EEEEEE
T ss_pred ----------------hhhhh---------hcccccccCCCHHHHHHHHHHHHcCCCc-c--ceeeeE
Confidence 11000 0111224578999999999999987654 3 378764
No 287
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.87 E-value=2.1e-21 Score=183.31 Aligned_cols=229 Identities=12% Similarity=0.084 Sum_probs=151.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+||||||+|+||.+++++|+++|++|++++|..... .+ ...+... +.++..+ |..+.+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~-~~~l~~~-~~~~~~~--d~~~v~ 60 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK----------------DE-LEAFAET-YPQLKPM--SEQEPA 60 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH----------------HH-HHHHHHH-CTTSEEC--CCCSHH
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HH-HHHHHhc-CCcEEEE--CHHHHH
Confidence 47899999999999999999999999999998754311 01 1111111 2233333 444432
Q ss_pred HH-HHHhhhc-CCCEEEEccccc-Ccc-cccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccccccCC
Q 011706 166 FL-SESFKSF-EPDAVVHFGEQR-SAP-YSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMGEYGTP 237 (479)
Q Consensus 166 ~~-~~~~~~~-~~D~Vih~A~~~-~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~v~g~~ 237 (479)
.+ +++.+.+ ++|+||||||.. ... ....+.+++.+++++|+.|+.++++++. +.+.+ +||++||...+.
T Consensus 61 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~-- 137 (254)
T 1zmt_A 61 ELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG-HIIFITSATPFG-- 137 (254)
T ss_dssp HHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCSTTTS--
T ss_pred HHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECCccccc--
Confidence 22 2222222 799999999976 322 2333556778899999999999998874 34445 999999965442
Q ss_pred CCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhhHhhhcc
Q 011706 238 NIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMHEELCNR 314 (479)
Q Consensus 238 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~ 314 (479)
+..+...|+.||++.+.+++.++.++ |+++++++||.|+||.......++-.
T Consensus 138 ----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~--- 192 (254)
T 1zmt_A 138 ----------------------PWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPW--- 192 (254)
T ss_dssp ----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHH---
T ss_pred ----------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccc---
Confidence 22336799999999999999999885 89999999999999865321110000
Q ss_pred cCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 315 LDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
.. ............ ....+.+++|+|++++.++..... .|+ ++++.++
T Consensus 193 -------~~-~~~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~~~tG~--~~~vdgG 242 (254)
T 1zmt_A 193 -------KT-NPEHVAHVKKVT---------ALQRLGTQKELGELVAFLASGSCDYLTGQ--VFWLAGG 242 (254)
T ss_dssp -------TT-CHHHHHHHHHHS---------SSSSCBCHHHHHHHHHHHHTTSCGGGTTC--EEEESTT
T ss_pred -------cc-ChHHHHHHhccC---------CCCCCcCHHHHHHHHHHHhCcccCCccCC--EEEECCC
Confidence 00 011111111111 112468899999999999986543 455 8999875
No 288
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.87 E-value=5.2e-21 Score=181.20 Aligned_cols=175 Identities=16% Similarity=0.086 Sum_probs=133.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+++|++|||||+|+||.+++++|+++|++|++++|..... .+..+.+... +.++.++.+|++|
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~~~-~~~~~~~~~Dv~~ 65 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTL----------------RVVAQEAQSL-GGQCVPVVCDSSQ 65 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----------------HHHHHHHHHH-SSEEEEEECCTTS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HHHHHHHHHc-CCceEEEECCCCC
Confidence 4689999999999999999999999999999998854321 1111111111 3478899999999
Q ss_pred hHHHHHHhhhc------CCCEEEEccc--cc------CcccccccccccchhhhhhHHHHHHHHHHHH----HcCCcceE
Q 011706 164 FEFLSESFKSF------EPDAVVHFGE--QR------SAPYSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHL 225 (479)
Q Consensus 164 ~~~~~~~~~~~------~~D~Vih~A~--~~------~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~ 225 (479)
+++++++++.. ++|+|||||| .. ..+....+.+++..++++|+.++.++.+++. +.+.+ +|
T Consensus 66 ~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~i 144 (260)
T 2qq5_A 66 ESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG-LI 144 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCC-EE
T ss_pred HHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCc-EE
Confidence 99888877542 5899999994 32 1122233556678899999999988887764 34445 99
Q ss_pred EEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCC
Q 011706 226 VKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVR 301 (479)
Q Consensus 226 V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~ 301 (479)
|++||...+.. .+...|+.||++.+.+++.++.++ |+++++++||.|..+.
T Consensus 145 v~isS~~~~~~-------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 145 VVISSPGSLQY-------------------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp EEECCGGGTSC-------------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred EEEcChhhcCC-------------------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 99999765421 125789999999999999998874 8999999999998774
No 289
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.87 E-value=8.1e-22 Score=186.67 Aligned_cols=178 Identities=10% Similarity=0.018 Sum_probs=135.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHh---CCCeEEEEecccccccccccCCCCCCccchhhhhhhhhccc-CCCceeEEE
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSN---KGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL-TGKNIELYI 158 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~---~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~ 158 (479)
.+++|++|||||+|+||.+++++|++ +|++|++++|..... .+..+.+... .+.++.++.
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~~ 66 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESML----------------RQLKEELGAQQPDLKVVLAA 66 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHH----------------HHHHHHHHHHCTTSEEEEEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHH----------------HHHHHHHHhhCCCCeEEEEe
Confidence 35689999999999999999999999 899999999864321 1111122111 135788999
Q ss_pred cccCChHHHHHHhhhc-------CCC--EEEEcccccCc---cccc-ccccccchhhhhhHHHHHHHHHHHHHcC-----
Q 011706 159 GDICDFEFLSESFKSF-------EPD--AVVHFGEQRSA---PYSM-IDRSRAVFTQHNNVIGTLNVLFAMKEFR----- 220 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~-------~~D--~Vih~A~~~~~---~~~~-~~~~~~~~~~~~Nv~g~~~ll~~a~~~g----- 220 (479)
+|++|+++++++++.. ++| +||||||.... +... .+.+++..++++|+.|+.++++++...-
T Consensus 67 ~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 146 (259)
T 1oaa_A 67 ADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG 146 (259)
T ss_dssp CCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT
T ss_pred cCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999988887643 468 99999997532 1222 3456788899999999999999997532
Q ss_pred CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh-CCceEEeecCeeec
Q 011706 221 QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYG 299 (479)
Q Consensus 221 ~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ivRp~~v~G 299 (479)
...+||++||...+. +..+...|+.||++.+.+++.++.++ +++++++.||.|-.
T Consensus 147 ~~g~iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T 202 (259)
T 1oaa_A 147 LSKTVVNISSLCALQ------------------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp CEEEEEEECCGGGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred CCceEEEEcCchhcC------------------------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCc
Confidence 123899999976552 22346899999999999999999986 48999999988754
Q ss_pred C
Q 011706 300 V 300 (479)
Q Consensus 300 p 300 (479)
+
T Consensus 203 ~ 203 (259)
T 1oaa_A 203 D 203 (259)
T ss_dssp H
T ss_pred c
Confidence 3
No 290
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.86 E-value=6.6e-21 Score=193.96 Aligned_cols=226 Identities=11% Similarity=0.015 Sum_probs=160.3
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|++|||||+|+||.+++++|+++|++|+++++..... .+.+..+. .++.++.+|+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~--------------~l~~~~~~------~~~~~~~~Dv 268 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAE--------------DLKRVADK------VGGTALTLDV 268 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHH--------------HHHHHHHH------HTCEEEECCT
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHH--------------HHHHHHHH------cCCeEEEEec
Confidence 345789999999999999999999999999999998753210 01111111 1467899999
Q ss_pred CChHHHHHHhhhc------CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc----CCcceEEEeec
Q 011706 162 CDFEFLSESFKSF------EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF----RQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~------~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----g~~~~~V~~SS 230 (479)
+|.++++++++.. .+|+||||||+..... ...+++++..++++|+.|+.++.+++... +.+ +||++||
T Consensus 269 td~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g-~iV~iSS 347 (454)
T 3u0b_A 269 TADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG-RVIGLSS 347 (454)
T ss_dssp TSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC-EEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-EEEEEeC
Confidence 9999988887643 3999999999865432 33466678899999999999999999875 444 9999999
Q ss_pred cc-cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchh
Q 011706 231 MG-EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETA 306 (479)
Q Consensus 231 ~~-v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~ 306 (479)
.. ..+.+ ....|+.+|+..+.+++.++.++ |++++++.||.|..+....
T Consensus 348 ~a~~~g~~-------------------------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-- 400 (454)
T 3u0b_A 348 MAGIAGNR-------------------------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA-- 400 (454)
T ss_dssp HHHHHCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------
T ss_pred hHhCCCCC-------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh--
Confidence 54 34332 36899999999999999988774 8999999999998764321
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~ 381 (479)
+.......... ......+...+|++++++.++......-.++++++.++
T Consensus 401 ------------------~~~~~~~~~~~--------~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG 449 (454)
T 3u0b_A 401 ------------------IPLATREVGRR--------LNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ 449 (454)
T ss_dssp -----------------------CHHHHH--------SBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred ------------------cchhhHHHHHh--------hccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence 00000000000 01122356889999999999875443222349998875
No 291
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.85 E-value=1.9e-20 Score=181.82 Aligned_cols=200 Identities=14% Similarity=0.060 Sum_probs=135.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..++|+||||||+|+||.+++++|+++|++|++++|.... ..+..+.+....+.++.++.+|++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~----------------~~~~~~~l~~~~~~~~~~~~~Dl~ 72 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTK----------------GHEAVEKLKNSNHENVVFHQLDVT 72 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH----------------HHHHHHHHHTTTCCSEEEEECCTT
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH----------------HHHHHHHHHhcCCCceEEEEccCC
Confidence 3468999999999999999999999999999999986542 112233333333457999999999
Q ss_pred Ch-HHHHHHhhhc-----CCCEEEEcccccCcc-------------------------------cccccccccchhhhhh
Q 011706 163 DF-EFLSESFKSF-----EPDAVVHFGEQRSAP-------------------------------YSMIDRSRAVFTQHNN 205 (479)
Q Consensus 163 d~-~~~~~~~~~~-----~~D~Vih~A~~~~~~-------------------------------~~~~~~~~~~~~~~~N 205 (479)
|. ++++++++.. ++|+||||||..... ....+.+++..++++|
T Consensus 73 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N 152 (311)
T 3o26_A 73 DPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKIN 152 (311)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeee
Confidence 98 8777776533 799999999976421 0112334566779999
Q ss_pred HHHHHHHHHHHHH----cCCcceEEEeeccccc-cCCCCC-C-----cCCceee-------------cCCCCCCCCCCCC
Q 011706 206 VIGTLNVLFAMKE----FRQECHLVKLGTMGEY-GTPNID-I-----EEGYITI-------------NHNGRTDTLPYPK 261 (479)
Q Consensus 206 v~g~~~ll~~a~~----~g~~~~~V~~SS~~v~-g~~~~~-~-----~e~~~~~-------------~~~~~~~~~~~~~ 261 (479)
+.|+.++++++.. .+.+ +||++||...+ +..... . .+..++. ......+. ....
T Consensus 153 ~~g~~~l~~~~~~~l~~~~~~-~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 230 (311)
T 3o26_A 153 YNGVKSVTEVLIPLLQLSDSP-RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIET-NGWP 230 (311)
T ss_dssp THHHHHHHHHHHHHHTTSSSC-EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTT-TTCC
T ss_pred eehHHHHHHHhhHhhccCCCC-eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhcccccc-ccCc
Confidence 9999999988854 3344 99999995433 211100 0 0000000 00000000 0011
Q ss_pred CCCchhhhhhHHHHHHHHHHHHHh-CCceEEeecCeeecC
Q 011706 262 QASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGV 300 (479)
Q Consensus 262 ~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ivRp~~v~Gp 300 (479)
.+...|+.||++.+.+++.+++++ +++++++.||.|..+
T Consensus 231 ~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 231 SFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred ccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence 345789999999999999999986 699999999998765
No 292
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.85 E-value=1.6e-20 Score=183.61 Aligned_cols=178 Identities=16% Similarity=0.105 Sum_probs=134.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhc--ccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK--SLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d 163 (479)
+|+||||||+|+||.+++++|+++|++|+++++....... ..+..+... ...+.++.++.+|++|
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~Dv~d 68 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKT-------------QGRLWEAARALACPPGSLETLQLDVRD 68 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGG-------------THHHHHHHHHTTCCTTSEEEEECCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHH-------------HHHHHHHhhhccCCCCceEEEEecCCC
Confidence 6899999999999999999999999999888775432110 111111111 0113578899999999
Q ss_pred hHHHHHHhhhc---CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecccccc
Q 011706 164 FEFLSESFKSF---EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTMGEYG 235 (479)
Q Consensus 164 ~~~~~~~~~~~---~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~~v~g 235 (479)
.++++++++.. ++|+||||||...... ...+.+++.+++++|+.|+.++++++ ++.+.+ +||++||...+.
T Consensus 69 ~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g-~IV~isS~~~~~ 147 (327)
T 1jtv_A 69 SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG-RVLVTGSVGGLM 147 (327)
T ss_dssp HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEEEEGGGTS
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEECCccccc
Confidence 99999998853 5999999999754322 23355667889999999999999986 344555 999999965442
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH---hCCceEEeecCeeecCC
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVR 301 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ivRp~~v~Gp~ 301 (479)
+......|+.||++.+.+++.++.+ +|+++++|+||.|..+.
T Consensus 148 ------------------------~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 148 ------------------------GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp ------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred ------------------------CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 1123578999999999999999887 58999999999998765
No 293
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.83 E-value=1.9e-19 Score=173.85 Aligned_cols=240 Identities=13% Similarity=0.077 Sum_probs=151.6
Q ss_pred CCCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEeccccccc-ccccCCCCCCccchhhhhhhhhcccC-CCceeEEE
Q 011706 83 PSKAKRVMIIGGD--GYCGWATALHLSNKGYEVAIVDSLIRRLF-DHQLGLDSLTPIASIHDRLRCWKSLT-GKNIELYI 158 (479)
Q Consensus 83 ~~~~~~vLVtGat--G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~ 158 (479)
.+++|++|||||+ |+||.+++++|+++|++|++++|...... ........+. ..+.+.... ......+.
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 77 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFD-------QSRVLPDGSLMEIKKVYP 77 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTT-------GGGBCTTSSBCCEEEEEE
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhh-------hhhhhccccccccccccc
Confidence 3578999999999 99999999999999999999986421000 0000000000 000000000 00012222
Q ss_pred c------------ccCC--------hHHHHHHhhhc-----CCCEEEEcccccC---cccccccccccchhhhhhHHHHH
Q 011706 159 G------------DICD--------FEFLSESFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTL 210 (479)
Q Consensus 159 ~------------Dl~d--------~~~~~~~~~~~-----~~D~Vih~A~~~~---~~~~~~~~~~~~~~~~~Nv~g~~ 210 (479)
+ |++| +++++++++.. ++|+||||||... .+....+.+++..++++|+.|+.
T Consensus 78 ~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~ 157 (297)
T 1d7o_A 78 LDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV 157 (297)
T ss_dssp ECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred cceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHH
Confidence 2 3332 44555555432 6999999999642 12233456678889999999999
Q ss_pred HHHHHHHHcC-CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCC-chhhhhhHHHHHHHHHHHHH----
Q 011706 211 NVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAFTCKA---- 284 (479)
Q Consensus 211 ~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~---- 284 (479)
++++++...- .+.+||++||...+.. .... ..|+.||++.+.+++.++.+
T Consensus 158 ~l~~~~~~~m~~~g~iv~isS~~~~~~------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~ 213 (297)
T 1d7o_A 158 SLLSHFLPIMNPGGASISLTYIASERI------------------------IPGYGGGMSSAKAALESDTRVLAFEAGRK 213 (297)
T ss_dssp HHHHHHGGGEEEEEEEEEEECGGGTSC------------------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCceEEEEeccccccC------------------------CCCcchHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999997641 1139999999654321 1123 57999999999999998876
Q ss_pred hCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHH
Q 011706 285 WGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAI 364 (479)
Q Consensus 285 ~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~ 364 (479)
+|+++++++||.|.++..... .....+...+....+ ...+..++|+|++++.++
T Consensus 214 ~gi~vn~v~PG~v~T~~~~~~-----------------~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~l~ 267 (297)
T 1d7o_A 214 QNIRVNTISAGPLGSRAAKAI-----------------GFIDTMIEYSYNNAP---------IQKTLTADEVGNAAAFLV 267 (297)
T ss_dssp HCCEEEEEEECCCBCCCSSCC-----------------SHHHHHHHHHHHHSS---------SCCCBCHHHHHHHHHHHT
T ss_pred cCcEEEEEeccccccchhhhc-----------------cccHHHHHHhhccCC---------CCCCCCHHHHHHHHHHHh
Confidence 589999999999999864321 011222222222222 124578999999999988
Q ss_pred hCCCC--CCCceEEEeCCC
Q 011706 365 ANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 365 ~~~~~--~g~~~~~ni~~~ 381 (479)
..... .|+ ++++.++
T Consensus 268 s~~~~~itG~--~i~vdgG 284 (297)
T 1d7o_A 268 SPLASAITGA--TIYVDNG 284 (297)
T ss_dssp SGGGTTCCSC--EEEESTT
T ss_pred CccccCCCCC--EEEECCC
Confidence 65333 354 8999876
No 294
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.83 E-value=4.7e-20 Score=179.56 Aligned_cols=223 Identities=15% Similarity=0.059 Sum_probs=152.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|+||||||+|+||.+++++|+++|++|+++++...... . -+......+..+.+... . ..+.+|++
T Consensus 6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~-~------~R~~~~~~~~~~~l~~~---~-~~~~~D~~ 74 (319)
T 1gz6_A 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKG-V------GKGSSAADKVVEEIRRR---G-GKAVANYD 74 (319)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTS-C------BCCSHHHHHHHHHHHHT---T-CEEEEECC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCccccc-c------cCCHHHHHHHHHHHHhh---C-CeEEEeCC
Confidence 467899999999999999999999999999999876421000 0 00000111111222111 1 12358999
Q ss_pred ChHHHHHHhhh----c-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecc-
Q 011706 163 DFEFLSESFKS----F-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTM- 231 (479)
Q Consensus 163 d~~~~~~~~~~----~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~- 231 (479)
|.++++++++. + ++|+||||||...... ...+.+++..++++|+.|+.++++++. +.+.+ +||++||.
T Consensus 75 ~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-rIV~vsS~~ 153 (319)
T 1gz6_A 75 SVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG-RIIMTASAS 153 (319)
T ss_dssp CGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEECCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECChh
Confidence 98877666543 2 6999999999765432 233556778899999999999998873 34555 99999995
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhhh
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAMH 308 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~~ 308 (479)
+.++.+ +...|+.||++.+.+++.++.++ |+++++++||.+ .+...
T Consensus 154 ~~~~~~-------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~----- 202 (319)
T 1gz6_A 154 GIYGNF-------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE----- 202 (319)
T ss_dssp HHHCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG-----
T ss_pred hccCCC-------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc-----
Confidence 555432 26789999999999999999884 899999999986 32110
Q ss_pred HhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC-CCCceEEEeCCCC
Q 011706 309 EELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ-PGEFRVFNQFTEQ 382 (479)
Q Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~-~g~~~~~ni~~~~ 382 (479)
..+. .....+++++|+|.+++.++..+.. .|+ +|++.++.
T Consensus 203 --------------~~~~------------------~~~~~~~~p~dvA~~~~~l~s~~~~~tG~--~~~v~GG~ 243 (319)
T 1gz6_A 203 --------------TVMP------------------EDLVEALKPEYVAPLVLWLCHESCEENGG--LFEVGAGW 243 (319)
T ss_dssp --------------GGSC------------------HHHHHHSCGGGTHHHHHHHTSTTCCCCSC--EEEEETTE
T ss_pred --------------ccCC------------------hhhhccCCHHHHHHHHHHHhCchhhcCCC--EEEECCCe
Confidence 0000 0112346889999999998876432 344 89887753
No 295
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.83 E-value=1.5e-20 Score=176.31 Aligned_cols=219 Identities=9% Similarity=-0.033 Sum_probs=146.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-e--cccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIV-D--SLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~-d--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+|++|||||+|+||.+++++|+++|++|+++ + |..... .+..+.+ .+..+. |..
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~----------------~~~~~~~-----~~~~~~--~~~ 57 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAER----------------QRFESEN-----PGTIAL--AEQ 57 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH----------------HHHHHHS-----TTEEEC--CCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHH----------------HHHHHHh-----CCCccc--CHH
Confidence 5799999999999999999999999999998 5 643211 1111111 122221 433
Q ss_pred ChHH-HHHHhhhc-CCCEEEEcccccCc---c-cccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeeccc
Q 011706 163 DFEF-LSESFKSF-EPDAVVHFGEQRSA---P-YSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTMG 232 (479)
Q Consensus 163 d~~~-~~~~~~~~-~~D~Vih~A~~~~~---~-~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~~ 232 (479)
+.+. ++++.+.+ ++|+||||||.... . ....+.+++..++++|+.|+.++++++. +.+.+ +||++||..
T Consensus 58 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~ 136 (244)
T 1zmo_A 58 KPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGA-SVIFITSSV 136 (244)
T ss_dssp CGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCGG
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECChh
Confidence 3332 23333333 68999999997643 2 2233556778899999999999998885 34445 999999976
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCC---Cchh
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRT---DETA 306 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~---~~~~ 306 (479)
.+.. ......|+.||++.+.+++.++.++ |+++++++||.|..+.. ...
T Consensus 137 ~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~- 191 (244)
T 1zmo_A 137 GKKP------------------------LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDW- 191 (244)
T ss_dssp GTSC------------------------CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHH-
T ss_pred hCCC------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccc-
Confidence 5431 2235789999999999999998874 89999999999977642 100
Q ss_pred hhHhhhcccCCCCcccchHHHHHHHHhc-CCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 307 MHEELCNRLDYDGVFGTALNRFCVQAAV-GHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 307 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
. . ......... ..+ ...+...+|+|++++.++..... .|+ ++.+.++
T Consensus 192 -----~---------~---~~~~~~~~~~~~p---------~~r~~~pe~vA~~v~~l~s~~~~~~tG~--~i~vdgG 241 (244)
T 1zmo_A 192 -----E---------N---NPELRERVDRDVP---------LGRLGRPDEMGALITFLASRRAAPIVGQ--FFAFTGG 241 (244)
T ss_dssp -----H---------H---CHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHTTTTGGGTTC--EEEESTT
T ss_pred -----c---------c---hHHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHcCccccCccCC--EEEeCCC
Confidence 0 0 011111111 111 12467899999999999986543 355 8888765
No 296
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.83 E-value=1.4e-19 Score=185.83 Aligned_cols=230 Identities=15% Similarity=0.118 Sum_probs=161.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYE-VAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~-V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..+++||||||+|+||.+++++|+++|++ |++++|...... ...+..+.+.. .+.++.++.+|++
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~-------------~~~~l~~~l~~-~g~~v~~~~~Dv~ 289 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDAD-------------GAGELVAELEA-LGARTTVAACDVT 289 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGST-------------THHHHHHHHHH-TTCEEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcH-------------HHHHHHHHHHh-cCCEEEEEEeCCC
Confidence 35789999999999999999999999995 888888643110 01111112211 2457899999999
Q ss_pred ChHHHHHHhhhc----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecc-ccccC
Q 011706 163 DFEFLSESFKSF----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTM-GEYGT 236 (479)
Q Consensus 163 d~~~~~~~~~~~----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~-~v~g~ 236 (479)
|.+++.++++.. .+|+||||||...... ...+++++..++++|+.|+.++.+++++.+.+ +||++||. +++|.
T Consensus 290 d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~-~~V~~SS~a~~~g~ 368 (486)
T 2fr1_A 290 DRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLT-AFVLFSSFASAFGA 368 (486)
T ss_dssp CHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCS-EEEEEEEHHHHTCC
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC-EEEEEcChHhcCCC
Confidence 999999999854 4699999999765322 23355667888999999999999999887776 99999995 55554
Q ss_pred CCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccC
Q 011706 237 PNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLD 316 (479)
Q Consensus 237 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~ 316 (479)
+. ...|+.+|...+.+...+. ..|+++++++||.+++++...
T Consensus 369 ~g-------------------------~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~------------ 410 (486)
T 2fr1_A 369 PG-------------------------LGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAE------------ 410 (486)
T ss_dssp TT-------------------------CTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC------------------
T ss_pred CC-------------------------CHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccc------------
Confidence 32 5789999999999887654 459999999999988764110
Q ss_pred CCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHH
Q 011706 317 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVT 393 (479)
Q Consensus 317 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~ 393 (479)
.... ..+. ..-..+++.+|+++++..++...... +.+. .+.|..+...+.
T Consensus 411 ----------~~~~--------~~~~--~~g~~~i~~e~~a~~l~~~l~~~~~~-----~~v~--~~d~~~~~~~~~ 460 (486)
T 2fr1_A 411 ----------GPVA--------DRFR--RHGVIEMPPETACRALQNALDRAEVC-----PIVI--DVRWDRFLLAYT 460 (486)
T ss_dssp ------------------------CT--TTTEECBCHHHHHHHHHHHHHTTCSS-----CEEC--EECHHHHHHHHT
T ss_pred ----------hhHH--------HHHH--hcCCCCCCHHHHHHHHHHHHhCCCCe-----EEEE--eCCHHHHhhhhc
Confidence 0000 0011 11246799999999999999865431 2222 255666665443
No 297
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.81 E-value=5.4e-19 Score=182.24 Aligned_cols=230 Identities=14% Similarity=0.134 Sum_probs=163.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.+++||||||+|+||.+++++|+++|+ +|++++|...... ...+..+.+.. .+.++.++.+|++|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~-------------~~~~l~~~l~~-~g~~v~~~~~Dvtd 323 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAP-------------GAAELAEELRG-HGCEVVHAACDVAE 323 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGST-------------THHHHHHHHHT-TTCEEEEEECCSSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccH-------------HHHHHHHHHHh-cCCEEEEEEeCCCC
Confidence 578999999999999999999999999 5888887543110 01111122221 24578999999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHc-CCcceEEEeecc-ccccCCCCC
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEF-RQECHLVKLGTM-GEYGTPNID 240 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-g~~~~~V~~SS~-~v~g~~~~~ 240 (479)
.+++.++++...+|+||||||...... ...+++++..++++|+.|+.++.+++... +.+ +||++||. +++|..
T Consensus 324 ~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~-~~V~~SS~a~~~g~~--- 399 (511)
T 2z5l_A 324 RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLD-AFVLFSSVTGTWGNA--- 399 (511)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCC-CEEEEEEGGGTTCCT---
T ss_pred HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCC-EEEEEeCHHhcCCCC---
Confidence 999999998656999999999865432 23355667788999999999999998776 555 99999995 556543
Q ss_pred CcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHhhhcccCCCCc
Q 011706 241 IEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320 (479)
Q Consensus 241 ~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~ 320 (479)
....|+.+|+..+.+++.+. ..|+++++++||.+.+.+..
T Consensus 400 ----------------------g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~----------------- 439 (511)
T 2z5l_A 400 ----------------------GQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMA----------------- 439 (511)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCC-----------------
T ss_pred ----------------------CCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccc-----------------
Confidence 26899999999999988653 46999999999987432211
Q ss_pred ccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHHHHHH
Q 011706 321 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTK 394 (479)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~~i~~ 394 (479)
..... ..+.. .-..+++.+|+++++..++..+.. .+.+. .+.|..+...+..
T Consensus 440 -~~~~~---~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~-----~v~v~--~~d~~~~~~~~~~ 491 (511)
T 2z5l_A 440 -AGAGE---ESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV-----CVTVV--DVDWERFAPATNA 491 (511)
T ss_dssp -CCHHH---HHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS-----EEEEC--CBCHHHHHHHHHH
T ss_pred -ccccH---HHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC-----EEEEE--eCCHHHHHhhhcc
Confidence 11111 11110 112468999999999999986432 23333 3556667665554
No 298
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.78 E-value=3e-18 Score=175.41 Aligned_cols=176 Identities=14% Similarity=0.124 Sum_probs=136.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.++++|||||+|+||.++++.|+++|+ .|++++|...... ...+..+.+.. .+.++.++.+|++|
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~-------------~~~~l~~~l~~-~g~~v~~~~~Dvtd 303 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAP-------------GAAELRAELEQ-LGVRVTIAACDAAD 303 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGST-------------THHHHHHHHHH-TTCEEEEEECCTTC
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChH-------------HHHHHHHHHHh-cCCeEEEEEccCCC
Confidence 358999999999999999999999998 6777777532210 01111122222 24689999999999
Q ss_pred hHHHHHHhhhc----CCCEEEEccccc-Cc-ccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec-cccccC
Q 011706 164 FEFLSESFKSF----EPDAVVHFGEQR-SA-PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT-MGEYGT 236 (479)
Q Consensus 164 ~~~~~~~~~~~----~~D~Vih~A~~~-~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS-~~v~g~ 236 (479)
.+++.++++.. ++|+||||||+. .. .....+++++..++++|+.|+.++.+++...+.+ +||++|| .+++|.
T Consensus 304 ~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~-~iV~~SS~a~~~g~ 382 (496)
T 3mje_A 304 REALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLD-AFVLFSSGAAVWGS 382 (496)
T ss_dssp HHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCS-EEEEEEEHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCC-EEEEEeChHhcCCC
Confidence 99999998753 589999999986 32 2233466678889999999999999999888776 9999999 455554
Q ss_pred CCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCC
Q 011706 237 PNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR 301 (479)
Q Consensus 237 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~ 301 (479)
+ ....|+.+|+..+.+.+.+. ..|+++++|.||.+.+++
T Consensus 383 ~-------------------------g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 383 G-------------------------GQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVG 421 (496)
T ss_dssp T-------------------------TCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSC
T ss_pred C-------------------------CcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCc
Confidence 3 36899999999999988654 569999999999987765
No 299
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.76 E-value=1.5e-18 Score=183.26 Aligned_cols=223 Identities=10% Similarity=0.005 Sum_probs=145.5
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++|++|||||+|+||.+++++|+++|++|+++++........ .......+..+.+... .. .+.+|+
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~-------~~~~~~~~~~~~i~~~---~~-~~~~D~ 83 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDG-------ASQRAADIVVDEIRKA---GG-EAVADY 83 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC---------------------CHHHHHHHHHHT---TC-CEEECC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCccccccc-------CCHHHHHHHHHHHHHh---CC-eEEEEe
Confidence 456899999999999999999999999999999988732110000 0000111112222111 11 234799
Q ss_pred CChHHHHHHhhhc-----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHH----HHcCCcceEEEeecc
Q 011706 162 CDFEFLSESFKSF-----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAM----KEFRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~~g~~~~~V~~SS~ 231 (479)
+|.++++++++.. ++|+||||||+..... ...+.+++..++++|+.|+.++++++ ++.+.+ +||++||.
T Consensus 84 ~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g-~IV~isS~ 162 (613)
T 3oml_A 84 NSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG-RIIMTSSN 162 (613)
T ss_dssp CCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEECCH
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEECCH
Confidence 9998888877643 6999999999865432 23356678899999999999999988 444545 99999994
Q ss_pred -ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecCeeecCCCCchhh
Q 011706 232 -GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVRTDETAM 307 (479)
Q Consensus 232 -~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~~v~Gp~~~~~~~ 307 (479)
+.++.+ ....|+.||++.+.+++.++.++ |++++++.||.+-....
T Consensus 163 a~~~~~~-------------------------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~----- 212 (613)
T 3oml_A 163 SGIYGNF-------------------------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE----- 212 (613)
T ss_dssp HHHHCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------C-----
T ss_pred HHcCCCC-------------------------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh-----
Confidence 444432 36889999999999999999885 89999999986421100
Q ss_pred hHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC-CCCCceEEEeCCC
Q 011706 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA-QPGEFRVFNQFTE 381 (479)
Q Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~~~ni~~~ 381 (479)
+. . .......+..+|+|.+++.++.... ..|+ ++++.++
T Consensus 213 ---------------------------~~----~--~~~~~~~~~pedvA~~v~~L~s~~~~~tG~--~i~vdGG 252 (613)
T 3oml_A 213 ---------------------------GI----L--PDILFNELKPKLIAPVVAYLCHESCEDNGS--YIESAAG 252 (613)
T ss_dssp ---------------------------CC----C--CHHHHTTCCGGGTHHHHHHTTSTTCCCCSC--EEEEETT
T ss_pred ---------------------------hc----c--chhhhhcCCHHHHHHHHHHhcCCCcCCCce--EEEECCC
Confidence 00 0 0112344578999999998887652 1344 8887654
No 300
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=99.76 E-value=1.1e-17 Score=162.78 Aligned_cols=246 Identities=15% Similarity=0.088 Sum_probs=148.5
Q ss_pred CCCCcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEeccccccccc-ccCCCCCCccchhhhhhhhhccc-CCCceeEEE
Q 011706 83 PSKAKRVMIIGG--DGYCGWATALHLSNKGYEVAIVDSLIRRLFDH-QLGLDSLTPIASIHDRLRCWKSL-TGKNIELYI 158 (479)
Q Consensus 83 ~~~~~~vLVtGa--tG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~ 158 (479)
.+++|++||||| +|+||.+++++|+++|++|++++|........ ...... + +....+... ....+.++.
T Consensus 6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~ 78 (315)
T 2o2s_A 6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGR------L-DEDRKLPDGSLIEFAGVYP 78 (315)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTT------T-HHHHBCTTSCBCCCSCEEE
T ss_pred cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhh------h-hhhhhhhcccccccccccc
Confidence 357899999999 89999999999999999999998642100000 000000 0 000011000 000123333
Q ss_pred ------------cccCC--------hHHHHHHhhhc-----CCCEEEEcccccC---cccccccccccchhhhhhHHHHH
Q 011706 159 ------------GDICD--------FEFLSESFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTL 210 (479)
Q Consensus 159 ------------~Dl~d--------~~~~~~~~~~~-----~~D~Vih~A~~~~---~~~~~~~~~~~~~~~~~Nv~g~~ 210 (479)
+|++| .++++++++.. ++|+||||||... .+....+++++..++++|+.|+.
T Consensus 79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 158 (315)
T 2o2s_A 79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV 158 (315)
T ss_dssp CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 34443 44555555432 6999999999642 22233456678889999999999
Q ss_pred HHHHHHHHcC-CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCC-chhhhhhHHHHHHHHHHHHH----
Q 011706 211 NVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAFTCKA---- 284 (479)
Q Consensus 211 ~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~---- 284 (479)
++++++...- .+.+||++||...+.. .... ..|+.||++.+.+++.++.+
T Consensus 159 ~l~~~~~~~m~~~g~Iv~isS~~~~~~------------------------~~~~~~~Y~asKaal~~l~~~la~el~~~ 214 (315)
T 2o2s_A 159 SLLQHFGPIMNEGGSAVTLSYLAAERV------------------------VPGYGGGMSSAKAALESDTRTLAWEAGQK 214 (315)
T ss_dssp HHHHHHSTTEEEEEEEEEEEEGGGTSC------------------------CTTCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeccccccc------------------------CCCccHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999996541 1139999999654321 1113 47999999999999988876
Q ss_pred hCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHH
Q 011706 285 WGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAI 364 (479)
Q Consensus 285 ~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~ 364 (479)
+|+++++|+||.|..+... .... ... ......+...+....+ ...+...+|+|++++.++
T Consensus 215 ~gIrvn~v~PG~v~T~~~~------~~~~--~~~---~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~ 274 (315)
T 2o2s_A 215 YGVRVNAISAGPLKSRAAS------AIGK--SGE---KSFIDYAIDYSYNNAP---------LRRDLHSDDVGGAALFLL 274 (315)
T ss_dssp TCCEEEEEEECCCCCHHHH------HTTC--SSS---SCHHHHHHHHHHHHSS---------SCCCCCHHHHHHHHHHHT
T ss_pred cCeEEEEEecccccchhhh------hccc--ccc---chhHHHHHHHHhccCC---------CCCCCCHHHHHHHHHHHh
Confidence 4899999999998654210 0000 000 0011111111111111 123568999999999988
Q ss_pred hCCCC--CCCceEEEeCCC
Q 011706 365 ANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 365 ~~~~~--~g~~~~~ni~~~ 381 (479)
..... .|+ ++.+.++
T Consensus 275 s~~~~~itG~--~i~vdGG 291 (315)
T 2o2s_A 275 SPLARAVSGV--TLYVDNG 291 (315)
T ss_dssp SGGGTTCCSC--EEEESTT
T ss_pred CchhccCcCC--EEEECCC
Confidence 75333 354 8888776
No 301
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=99.76 E-value=8e-18 Score=164.11 Aligned_cols=251 Identities=12% Similarity=0.028 Sum_probs=132.7
Q ss_pred CCCCcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEecccc------cccccccCCCCCCccc--hhhhhhhhhcccCC-
Q 011706 83 PSKAKRVMIIGG--DGYCGWATALHLSNKGYEVAIVDSLIR------RLFDHQLGLDSLTPIA--SIHDRLRCWKSLTG- 151 (479)
Q Consensus 83 ~~~~~~vLVtGa--tG~iG~~l~~~Ll~~G~~V~~~dr~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 151 (479)
.+++|++||||| +|+||.+++++|+++|++|++++|... ..... .......+. ...+..+.+.....
T Consensus 6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (319)
T 2ptg_A 6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESS--RFEQDSFYAQEPSSKVAAEAAEKPVD 83 (319)
T ss_dssp CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC---------------------------------
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhh--hhhhhhhhhcchhhhHHHHhhhcccc
Confidence 356899999999 899999999999999999999986420 00000 000000000 00000111110000
Q ss_pred -CceeEEEc------------ccCC--------hHHHHHHhhhc-----CCCEEEEcccccC---cccccccccccchhh
Q 011706 152 -KNIELYIG------------DICD--------FEFLSESFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQ 202 (479)
Q Consensus 152 -~~v~~v~~------------Dl~d--------~~~~~~~~~~~-----~~D~Vih~A~~~~---~~~~~~~~~~~~~~~ 202 (479)
....++.+ |++| .++++++++.. ++|+||||||... .+....+.+++..++
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T 2ptg_A 84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163 (319)
T ss_dssp -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence 01233333 3333 33555555432 6999999999642 122334566788899
Q ss_pred hhhHHHHHHHHHHHHHcC-CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCC-chhhhhhHHHHHHHHH
Q 011706 203 HNNVIGTLNVLFAMKEFR-QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAF 280 (479)
Q Consensus 203 ~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~ 280 (479)
++|+.|+.++++++...- .+.+||++||...+.. .... ..|+.||++.+.+++.
T Consensus 164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~------------------------~~~~~~~Y~asKaal~~l~~~ 219 (319)
T 2ptg_A 164 SSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKV------------------------IPGYGGGMSSAKAALESDCRT 219 (319)
T ss_dssp HHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------------------THHHHHH
T ss_pred hHhhHHHHHHHHHHHHHHhcCceEEEEeccccccc------------------------cCccchhhHHHHHHHHHHHHH
Confidence 999999999999997641 1139999999653311 1123 5799999999999998
Q ss_pred HHHH----hCCceEEeecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHH
Q 011706 281 TCKA----WGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDT 356 (479)
Q Consensus 281 ~~~~----~gl~~~ivRp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv 356 (479)
++.+ +|+++++|+||.|..+...... ......+..... ..+........+...+|+
T Consensus 220 la~el~~~~gIrvn~v~PG~v~T~~~~~~~---------------~~~~~~~~~~~~-----~~~~~~~p~~r~~~peev 279 (319)
T 2ptg_A 220 LAFEAGRARAVRVNCISAGPLKSRAASAIG---------------KAGDKTFIDLAI-----DYSEANAPLQKELESDDV 279 (319)
T ss_dssp HHHHHHHHHCCEEEEEEECCCC---------------------------------------------------CCCHHHH
T ss_pred HHHHhccccCeeEEEEeeCCccChhhhhcc---------------cccchhhHHHHH-----HHHhccCCCCCCCCHHHH
Confidence 8876 4899999999998766321100 000000000000 000000112246789999
Q ss_pred HHHHHHHHhCCCC--CCCceEEEeCCC
Q 011706 357 VQCVELAIANPAQ--PGEFRVFNQFTE 381 (479)
Q Consensus 357 a~a~~~~~~~~~~--~g~~~~~ni~~~ 381 (479)
|++++.++..... .|+ ++.+.++
T Consensus 280 A~~v~~L~s~~~~~itG~--~i~vdGG 304 (319)
T 2ptg_A 280 GRAALFLLSPLARAVTGA--TLYVDNG 304 (319)
T ss_dssp HHHHHHHTSGGGTTCCSC--EEEESTT
T ss_pred HHHHHHHhCcccCCccCC--EEEECCC
Confidence 9999999875333 454 8888875
No 302
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.75 E-value=2.5e-18 Score=168.13 Aligned_cols=176 Identities=12% Similarity=0.107 Sum_probs=124.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEE
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY-------EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYI 158 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~-------~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 158 (479)
.|+|+||||+||||++++..|+.+|+ +|+++|+...... .......+. ...+.++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~--------------~~g~~~dl~---~~~~~~~- 65 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKA--------------LEGVVMELE---DCAFPLL- 65 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHH--------------HHHHHHHHH---TTTCTTE-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhh--------------ccchhhhhh---ccccccc-
Confidence 46899999999999999999999986 8999987531000 000011111 1122333
Q ss_pred cccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeeccc-cccC
Q 011706 159 GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTMG-EYGT 236 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~~-v~g~ 236 (479)
+|+++.+.+.++++ ++|+|||+||....+. .+ ....+++|+.++.++++++++.+ .+.+|+++|+.. +..
T Consensus 66 ~di~~~~~~~~a~~--~~D~Vih~Ag~~~~~~--~~---~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~- 137 (327)
T 1y7t_A 66 AGLEATDDPKVAFK--DADYALLVGAAPRKAG--ME---RRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA- 137 (327)
T ss_dssp EEEEEESCHHHHTT--TCSEEEECCCCCCCTT--CC---HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-
T ss_pred CCeEeccChHHHhC--CCCEEEECCCcCCCCC--CC---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-
Confidence 68877777888888 8999999999764331 22 24568999999999999999986 655788777632 110
Q ss_pred CCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCC
Q 011706 237 PNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 302 (479)
Q Consensus 237 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~ 302 (479)
+..++ .. ....|.+.|+.+|+.+|++...+++.+|++++++|+++||||..
T Consensus 138 ---~~~~~-----------~~-~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 138 ---LIAYK-----------NA-PGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp ---HHHHH-----------TC-TTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred ---HHHHH-----------Hc-CCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 11110 00 01234677999999999999999999999999999999999975
No 303
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=99.74 E-value=4e-17 Score=159.78 Aligned_cols=183 Identities=9% Similarity=0.001 Sum_probs=125.4
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEeccccc---ccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcc
Q 011706 86 AKRVMIIGGDG--YCGWATALHLSNKGYEVAIVDSLIRR---LFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 86 ~~~vLVtGatG--~iG~~l~~~Ll~~G~~V~~~dr~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
+|++|||||++ +||.+++++|+++|++|++.++.... ..+.. .... . .............+.++.+|
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~-~~~~------~-~~~~~~~~~~~~~~~~~~~D 73 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYK-NGKF------D-NDMIIDKDKKMNILDMLPFD 73 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHH-TTTT------T-GGGBCSSSCBCCEEEEEECC
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchH-HHHH------H-HHHHHhhccccccccccccc
Confidence 68999999975 99999999999999999987754310 00000 0000 0 00000000111346778888
Q ss_pred cCCh--H------------------HHHHHhhhc-----CCCEEEEcccccC---cccccccccccchhhhhhHHHHHHH
Q 011706 161 ICDF--E------------------FLSESFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNV 212 (479)
Q Consensus 161 l~d~--~------------------~~~~~~~~~-----~~D~Vih~A~~~~---~~~~~~~~~~~~~~~~~Nv~g~~~l 212 (479)
+++. + ++.++++.. ++|++|||||+.. .+....+++++..++++|+.|+.++
T Consensus 74 v~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l 153 (329)
T 3lt0_A 74 ASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISL 153 (329)
T ss_dssp TTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence 8776 6 666666543 6999999999642 2333446677889999999999999
Q ss_pred HHHHHHcC-CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCc-hhhhhhHHHHHHHHHHHHH----hC
Q 011706 213 LFAMKEFR-QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKA----WG 286 (479)
Q Consensus 213 l~~a~~~g-~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~----~g 286 (479)
.+++...- .+.+||++||...+. +..... .|+.||++.+.+++.++.+ +|
T Consensus 154 ~~~~~p~m~~~g~Iv~isS~~~~~------------------------~~~~~~~~Y~asKaal~~~~~~la~el~~~~g 209 (329)
T 3lt0_A 154 CKYFVNIMKPQSSIISLTYHASQK------------------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYN 209 (329)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTS------------------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhCCeEEEEeCccccC------------------------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99986531 113899999964331 112243 8999999999999988876 48
Q ss_pred CceEEeecCeeecC
Q 011706 287 IRATDLNQGVVYGV 300 (479)
Q Consensus 287 l~~~ivRp~~v~Gp 300 (479)
++++++.||.|..+
T Consensus 210 I~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 210 IRINTISAGPLKSR 223 (329)
T ss_dssp CEEEEEEECCCCCH
T ss_pred eEEEEEecceeech
Confidence 99999999988644
No 304
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.73 E-value=1.6e-17 Score=172.00 Aligned_cols=241 Identities=13% Similarity=0.065 Sum_probs=157.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeE-EEE-ecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEV-AIV-DSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V-~~~-dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..++++|||||+|+||.++++.|+++|+++ +++ +|............ .......+..+.+.. .+.++.++.+|+
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~---~~~~~~~~~~~~l~~-~g~~v~~~~~Dv 324 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGA---AEDSGLAGLVAELAD-LGATATVVTCDL 324 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC------------------CHHHHHHHHH-HTCEEEEEECCT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCcccccccc---ccCHHHHHHHHHHHh-cCCEEEEEECCC
Confidence 368899999999999999999999999984 444 56432100000000 000011122222222 245799999999
Q ss_pred CChHHHHHHhhhc----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcC-----CcceEEEeecc
Q 011706 162 CDFEFLSESFKSF----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-----QECHLVKLGTM 231 (479)
Q Consensus 162 ~d~~~~~~~~~~~----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-----~~~~~V~~SS~ 231 (479)
+|.+++.++++.. .+|+||||||...... ...+++++..++++|+.|+.++.+++.... .+ +||++||.
T Consensus 325 td~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~-~iV~~SS~ 403 (525)
T 3qp9_A 325 TDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP-VLVLFSSV 403 (525)
T ss_dssp TSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC-EEEEEEEG
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC-EEEEECCH
Confidence 9999999999853 5899999999865432 234666788899999999999999998765 45 89999994
Q ss_pred -ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCCCchhhhHh
Q 011706 232 -GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEE 310 (479)
Q Consensus 232 -~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~~~~~~~~~ 310 (479)
+++|.+ ....|+.+|+..+.+...+. ..|+++++|.||.+-.+...
T Consensus 404 a~~~g~~-------------------------g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm~~------- 450 (525)
T 3qp9_A 404 AAIWGGA-------------------------GQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSRVT------- 450 (525)
T ss_dssp GGTTCCT-------------------------TCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSGGG-------
T ss_pred HHcCCCC-------------------------CCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcccccccc-------
Confidence 444432 36899999999998865443 34899999999998222100
Q ss_pred hhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCCCCCceEEEeCCCCcCHHHHHH
Q 011706 311 LCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTEQFSVNQLAA 390 (479)
Q Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~ni~~~~~s~~el~~ 390 (479)
...... .+... -...+..+++++++..++..+... +. + ..+.|..+..
T Consensus 451 -----------~~~~~~---~~~~~-----------g~~~l~pee~a~~l~~~l~~~~~~----v~-v--~~~dw~~~~~ 498 (525)
T 3qp9_A 451 -----------EGATGE---RLRRL-----------GLRPLAPATALTALDTALGHGDTA----VT-I--ADVDWSSFAP 498 (525)
T ss_dssp -----------SSHHHH---HHHHT-----------TBCCBCHHHHHHHHHHHHHHTCSE----EE-E--CCBCHHHHHH
T ss_pred -----------chhhHH---HHHhc-----------CCCCCCHHHHHHHHHHHHhCCCCe----EE-E--EeCCHHHHHh
Confidence 000111 11111 013478999999999999865321 22 2 2355666665
Q ss_pred HHHH
Q 011706 391 LVTK 394 (479)
Q Consensus 391 ~i~~ 394 (479)
.+..
T Consensus 499 ~~~~ 502 (525)
T 3qp9_A 499 GFTT 502 (525)
T ss_dssp HHHS
T ss_pred hccc
Confidence 5543
No 305
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.71 E-value=2.3e-16 Score=165.99 Aligned_cols=168 Identities=17% Similarity=0.107 Sum_probs=124.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc-
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI- 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl- 161 (479)
.+++|++|||||+++||.+++++|+++|++|++.++... .+..+.+.. .+.++..+.+|+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~------------------~~~~~~i~~-~g~~~~~~~~Dv~ 379 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA------------------TKTVDEIKA-AGGEAWPDQHDVA 379 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC------------------HHHHHHHHH-TTCEEEEECCCHH
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH------------------HHHHHHHHh-cCCeEEEEEcChH
Confidence 467899999999999999999999999999999875210 111122211 134567778888
Q ss_pred CChHH-HHHHhhhc-CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHH----cCCcceEEEeecc-cc
Q 011706 162 CDFEF-LSESFKSF-EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKE----FRQECHLVKLGTM-GE 233 (479)
Q Consensus 162 ~d~~~-~~~~~~~~-~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~g~~~~~V~~SS~-~v 233 (479)
.+.+. ++++.+.+ ++|++|||||+..... ...+++++.+++++|+.|+.++.+++.. .+.+ +||++||. +.
T Consensus 380 ~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G-~IVnisS~ag~ 458 (604)
T 2et6_A 380 KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG-RIINITSTSGI 458 (604)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECChhhc
Confidence 55443 33444433 6999999999764332 2346678899999999999999888743 3444 99999994 33
Q ss_pred ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecC
Q 011706 234 YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG 295 (479)
Q Consensus 234 ~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~ 295 (479)
++.+ ....|+.||++...+.+.++.++ |++++.|.||
T Consensus 459 ~~~~-------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 459 YGNF-------------------------GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp SCCT-------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred cCCC-------------------------CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 4322 26789999999999999999884 8999999997
No 306
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=99.66 E-value=1.4e-15 Score=148.99 Aligned_cols=188 Identities=13% Similarity=-0.025 Sum_probs=128.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSN-KGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~-~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.+|++|||||+++||.++++.|++ +|++|+++++........ ....... ..+.........+..+..+.+|++|
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~---~~~~gwy--n~~~~~~~~~~~G~~a~~i~~Dvtd 120 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGK---PGTSGWY--NSAAFHKFAAQKGLYAKSINGDAFS 120 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTB---CCCHHHH--HHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhh---cccccch--hHHHHHHHHHhcCCceEEEECCCCC
Confidence 479999999999999999999999 999999988754321000 0000000 0001111111124578889999999
Q ss_pred hHHHHHHhhhc-----CCCEEEEcccccC-------------c-cc---------------------ccccccccchhhh
Q 011706 164 FEFLSESFKSF-----EPDAVVHFGEQRS-------------A-PY---------------------SMIDRSRAVFTQH 203 (479)
Q Consensus 164 ~~~~~~~~~~~-----~~D~Vih~A~~~~-------------~-~~---------------------~~~~~~~~~~~~~ 203 (479)
+++++++++.. ++|++|||||... . +. ...+++++.++++
T Consensus 121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~ 200 (405)
T 3zu3_A 121 DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVA 200 (405)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHH
Confidence 99888877643 6999999999741 1 11 2235667889999
Q ss_pred hhHHHHH-HHHHHHHHcC---CcceEEEeeccccc-cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHH
Q 011706 204 NNVIGTL-NVLFAMKEFR---QECHLVKLGTMGEY-GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNI 278 (479)
Q Consensus 204 ~Nv~g~~-~ll~~a~~~g---~~~~~V~~SS~~v~-g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 278 (479)
+|..+.. .+++++...+ .+.++|++||.+.. +. +......|+.+|.+.+.+.
T Consensus 201 Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~-----------------------p~~~~~aY~AaKaal~~lt 257 (405)
T 3zu3_A 201 VMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH-----------------------DIYWNGSIGAAKKDLDQKV 257 (405)
T ss_dssp HHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT-----------------------TTTTTSHHHHHHHHHHHHH
T ss_pred hhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC-----------------------CCccchHHHHHHHHHHHHH
Confidence 9998887 6666654322 12489999995422 11 1112378999999999999
Q ss_pred HHHHHHh----CCceEEeecCeeecC
Q 011706 279 AFTCKAW----GIRATDLNQGVVYGV 300 (479)
Q Consensus 279 ~~~~~~~----gl~~~ivRp~~v~Gp 300 (479)
+.++.++ |++++++-||.|--+
T Consensus 258 rsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 258 LAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp HHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred HHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 9999884 899999999987544
No 307
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.64 E-value=1.2e-15 Score=160.62 Aligned_cols=176 Identities=15% Similarity=0.057 Sum_probs=120.5
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+++||++++++|+++|++|++.|+....... . .....+.+..+.+... +..+ .+|++
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~-g------r~~~~~~~~~~~i~~~-g~~~---~~d~~ 73 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQ-G------GNSKAADVVVDEIVKN-GGVA---VADYN 73 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC------------------CHHHHHHHHHHHT-TCEE---EEECC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcccccc-c------cchHHHHHHHHHHHhc-CCeE---EEEcC
Confidence 3578999999999999999999999999999998875310000 0 0000111112222111 1222 35766
Q ss_pred ChHHHHHHh----hhc-CCCEEEEcccccCcc-cccccccccchhhhhhHHHHHHHHHHHH----HcCCcceEEEeecc-
Q 011706 163 DFEFLSESF----KSF-EPDAVVHFGEQRSAP-YSMIDRSRAVFTQHNNVIGTLNVLFAMK----EFRQECHLVKLGTM- 231 (479)
Q Consensus 163 d~~~~~~~~----~~~-~~D~Vih~A~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~g~~~~~V~~SS~- 231 (479)
|.+++++++ +.+ ++|++|||||+.... ....+.+++++++++|+.|+.++.+++. +.+.+ +||++||.
T Consensus 74 d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G-~IVnisS~a 152 (604)
T 2et6_A 74 NVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYG-RIVNTSSPA 152 (604)
T ss_dssp CTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECCHH
Confidence 664444433 333 699999999976432 2334667889999999999999988774 33445 99999994
Q ss_pred ccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHh---CCceEEeecC
Q 011706 232 GEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG 295 (479)
Q Consensus 232 ~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ivRp~ 295 (479)
+.++.+ ....|+.||++...+.+.++.++ |++++.|.|+
T Consensus 153 g~~~~~-------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 153 GLYGNF-------------------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp HHHCCT-------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HcCCCC-------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 444432 25789999999999999999884 8999999996
No 308
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.63 E-value=7.7e-15 Score=166.49 Aligned_cols=236 Identities=12% Similarity=0.037 Sum_probs=155.5
Q ss_pred CCCCcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhh-ccc--CCCceeEEE
Q 011706 83 PSKAKRVMIIGGDGY-CGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW-KSL--TGKNIELYI 158 (479)
Q Consensus 83 ~~~~~~vLVtGatG~-iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~v~~v~ 158 (479)
.+++|+||||||+|+ ||.+++++|+++|++|+++++..... +.+....+ ..+ .+.++.++.
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~---------------l~~~a~eL~~el~~~G~~v~~v~ 713 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQ---------------VTEYYQGIYARCGARGSQLVVVP 713 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHH---------------HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHH---------------HHHHHHHHHHHhhccCCeEEEEE
Confidence 467899999999999 99999999999999999986432211 11111111 111 135788999
Q ss_pred cccCChHHHHHHhhh-------c--CCCEEEEcccccCcc-c-cccc--ccccchhhhhhHHHHHHHHHHHHHc-----C
Q 011706 159 GDICDFEFLSESFKS-------F--EPDAVVHFGEQRSAP-Y-SMID--RSRAVFTQHNNVIGTLNVLFAMKEF-----R 220 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~-------~--~~D~Vih~A~~~~~~-~-~~~~--~~~~~~~~~~Nv~g~~~ll~~a~~~-----g 220 (479)
+|++|.++++++++. + ++|+||||||+.... . ...+ ++++.+++++|+.|+.+++++++.. .
T Consensus 714 ~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~ 793 (1878)
T 2uv9_A 714 FNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR 793 (1878)
T ss_dssp CCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC
T ss_pred cCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 999999999888763 3 489999999976443 2 2223 4678899999999999998774321 1
Q ss_pred CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH-h--CCceEEeecCee
Q 011706 221 QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA-W--GIRATDLNQGVV 297 (479)
Q Consensus 221 ~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~--gl~~~ivRp~~v 297 (479)
...+||++||...+. + ....|+.+|++.+.+++.+..+ + +++++.|.||.+
T Consensus 794 ~~G~IVnISS~ag~~------------------------g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V 847 (1878)
T 2uv9_A 794 PAQVILPLSPNHGTF------------------------G--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWT 847 (1878)
T ss_dssp CEEECCEECSCSSSS------------------------S--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCB
T ss_pred CCCEEEEEcchhhcc------------------------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecce
Confidence 113899999953221 1 1467999999999998766544 2 399999999998
Q ss_pred e-cCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCC---CCCCc
Q 011706 298 Y-GVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA---QPGEF 373 (479)
Q Consensus 298 ~-Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~ 373 (479)
- .+.... ...........++ .+...+|+|.+++.++.... ..|+
T Consensus 848 ~gT~m~~~---------------------~~~~~~~~~~~pl----------r~~sPeEVA~avlfLaSd~a~s~iTGq- 895 (1878)
T 2uv9_A 848 RGTGLMSA---------------------NNLVAEGVEKLGV----------RTFSQQEMAFNLLGLMAPAIVNLCQSD- 895 (1878)
T ss_dssp CCTTSCSH---------------------HHHTHHHHHTTTC----------CCBCHHHHHHHHHHHHSHHHHHHHTTS-
T ss_pred ecCccccc---------------------chhhHHHHHhcCC----------CCCCHHHHHHHHHHHhCCcccccccCc-
Confidence 7 332110 0111111111111 23488999999998886432 1344
Q ss_pred eEEEe--CCC---CcCHHHHHHHH
Q 011706 374 RVFNQ--FTE---QFSVNQLAALV 392 (479)
Q Consensus 374 ~~~ni--~~~---~~s~~el~~~i 392 (479)
++++ .++ ...+.++...+
T Consensus 896 -~I~VDVDGG~~~~~~l~el~~~l 918 (1878)
T 2uv9_A 896 -PVFADLNGGLQFIPDLKGLMTKL 918 (1878)
T ss_dssp -CEEEEESCSGGGCTTHHHHHHHH
T ss_pred -EEEEEcCCCccccCCHHHHHHHH
Confidence 5555 333 35666665544
No 309
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=99.62 E-value=2.9e-15 Score=148.22 Aligned_cols=190 Identities=13% Similarity=-0.059 Sum_probs=126.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSN-KGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~-~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.+|++|||||+++||.++++.|++ +|++|+++++........ ...... .............+..+..+.+|++|
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~---~~~ag~--~n~~a~~~~~~~~G~~a~~i~~Dvtd 134 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASK---AGTAGW--YNSAAFDKHAKAAGLYSKSINGDAFS 134 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSS---CCCHHH--HHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhh---hccccc--chhHHHHHHHHhcCCcEEEEEecCCC
Confidence 378999999999999999999999 999999998754321000 000000 00000101111224578889999999
Q ss_pred hHHHHHHhhh----c--CCCEEEEccccc-------------Cccc----------------------ccccccccchhh
Q 011706 164 FEFLSESFKS----F--EPDAVVHFGEQR-------------SAPY----------------------SMIDRSRAVFTQ 202 (479)
Q Consensus 164 ~~~~~~~~~~----~--~~D~Vih~A~~~-------------~~~~----------------------~~~~~~~~~~~~ 202 (479)
+++++++++. + ++|++|||||.. .... ...+++++.+++
T Consensus 135 ~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v 214 (422)
T 3s8m_A 135 DAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTI 214 (422)
T ss_dssp HHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHH
Confidence 9887776652 2 589999999862 1111 023556777888
Q ss_pred hhhHHHHH-HHHHHHHHcC---CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHH
Q 011706 203 HNNVIGTL-NVLFAMKEFR---QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNI 278 (479)
Q Consensus 203 ~~Nv~g~~-~ll~~a~~~g---~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 278 (479)
++|..+.. .+++++...+ .+.+||++||.+-.-. .+......|+.||++.+.+.
T Consensus 215 ~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~----------------------~p~~~~~aY~ASKaAl~~lT 272 (422)
T 3s8m_A 215 TVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEIT----------------------WPIYWHGALGKAKVDLDRTA 272 (422)
T ss_dssp HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG----------------------HHHHTSHHHHHHHHHHHHHH
T ss_pred HhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc----------------------CCCccchHHHHHHHHHHHHH
Confidence 88888775 6666664432 1238999999542210 01111378999999999999
Q ss_pred HHHHHHh---CCceEEeecCeeecCC
Q 011706 279 AFTCKAW---GIRATDLNQGVVYGVR 301 (479)
Q Consensus 279 ~~~~~~~---gl~~~ivRp~~v~Gp~ 301 (479)
+.++.++ |++++++.||.|--+.
T Consensus 273 rsLA~Ela~~GIRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 273 QRLNARLAKHGGGANVAVLKSVVTQA 298 (422)
T ss_dssp HHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred HHHHHHhCccCEEEEEEEcCCCcChh
Confidence 9999885 8999999999986654
No 310
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.59 E-value=6.2e-15 Score=159.73 Aligned_cols=175 Identities=20% Similarity=0.185 Sum_probs=132.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHH-hCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLS-NKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll-~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..++++|||||+|+||..+++.|+ ++|+ +|++++|...... ...+..+.+.. .+.++.++.+|+
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~-------------~~~~~~~~l~~-~G~~v~~~~~Dv 593 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAAS-------------GAAELVAQLTA-YGAEVSLQACDV 593 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGST-------------THHHHHHHHHH-TTCEEEEEECCT
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchH-------------HHHHHHHHHHh-cCCcEEEEEeec
Confidence 358899999999999999999999 7898 4888887633110 11122222222 246799999999
Q ss_pred CChHHHHHHhhhc----CCCEEEEcccccCccc-ccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecc-cccc
Q 011706 162 CDFEFLSESFKSF----EPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTM-GEYG 235 (479)
Q Consensus 162 ~d~~~~~~~~~~~----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~-~v~g 235 (479)
+|.++++++++.. .+|+||||||+..... ...+.+++..++++|+.|+.++.+++... - +||++||. ++.|
T Consensus 594 sd~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~--l-~iV~~SS~ag~~g 670 (795)
T 3slk_A 594 ADRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD--V-ALVLFSSVSGVLG 670 (795)
T ss_dssp TCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT--S-EEEEEEETHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC--C-EEEEEccHHhcCC
Confidence 9999999998754 5899999999865432 33466788999999999999999988332 2 89999994 4555
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCC
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR 301 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~ 301 (479)
.+. +..|+.+|...+.+.+.+. ..|++++.+-||.+-.++
T Consensus 671 ~~g-------------------------~~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 671 SGG-------------------------QGNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHG 710 (795)
T ss_dssp CSS-------------------------CHHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCC
T ss_pred CCC-------------------------CHHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcch
Confidence 432 7899999998888877654 459999999999886553
No 311
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=99.59 E-value=2.4e-14 Score=142.83 Aligned_cols=189 Identities=12% Similarity=-0.034 Sum_probs=127.1
Q ss_pred CCCcEEEEEcCCchhhHH--HHHHHHhCCCeEEEEecccccccccccCCCCCCc-cchhhhhhhhhcccCCCceeEEEcc
Q 011706 84 SKAKRVMIIGGDGYCGWA--TALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTP-IASIHDRLRCWKSLTGKNIELYIGD 160 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~--l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D 160 (479)
..+|++|||||+++||.+ +++.|+++|++|+++++....... .... .-...+.+.......+..+..+.+|
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D 131 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDR------RIGTAGWYNNIFFKEFAKKKGLVAKNFIED 131 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSS------CCCCHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhh------cccccccchHHHHHHHHHHcCCcEEEEEee
Confidence 468999999999999999 999999999999999875432100 0000 0000111222222234578899999
Q ss_pred cCChHHHHHHhhhc-----CCCEEEEccccc-------------Cccc----------------------ccccccccch
Q 011706 161 ICDFEFLSESFKSF-----EPDAVVHFGEQR-------------SAPY----------------------SMIDRSRAVF 200 (479)
Q Consensus 161 l~d~~~~~~~~~~~-----~~D~Vih~A~~~-------------~~~~----------------------~~~~~~~~~~ 200 (479)
++|.++++++++.. ++|++|||||.. .... ...+++++..
T Consensus 132 vtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~ 211 (418)
T 4eue_A 132 AFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEE 211 (418)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHH
Confidence 99999888877643 689999999973 1100 1124556677
Q ss_pred hhhhhHHHHH-HHHHHHHHcCC---cceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHH
Q 011706 201 TQHNNVIGTL-NVLFAMKEFRQ---ECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSH 276 (479)
Q Consensus 201 ~~~~Nv~g~~-~ll~~a~~~g~---~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 276 (479)
++++|..+.. .+++++...+. +.++|++||.+-... .|......|+.||++.+.
T Consensus 212 ~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~----------------------~p~~~~~aY~ASKaAL~~ 269 (418)
T 4eue_A 212 TRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT----------------------YKIYREGTIGIAKKDLED 269 (418)
T ss_dssp HHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG----------------------TTTTTTSHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC----------------------CCccccHHHHHHHHHHHH
Confidence 7888877766 56666554321 248999998542210 121223889999999999
Q ss_pred HHHHHHHH----hCCceEEeecCeeecC
Q 011706 277 NIAFTCKA----WGIRATDLNQGVVYGV 300 (479)
Q Consensus 277 ~~~~~~~~----~gl~~~ivRp~~v~Gp 300 (479)
+.+.++.+ .|++++++.||.|--+
T Consensus 270 ltrsLA~ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 270 KAKLINEKLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp HHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred HHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence 99998876 5899999999987543
No 312
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.59 E-value=1.3e-14 Score=164.96 Aligned_cols=176 Identities=15% Similarity=0.137 Sum_probs=129.0
Q ss_pred CCCCcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhh-ccc--CCCceeEEE
Q 011706 83 PSKAKRVMIIGGDGY-CGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW-KSL--TGKNIELYI 158 (479)
Q Consensus 83 ~~~~~~vLVtGatG~-iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~v~~v~ 158 (479)
.+++|++|||||+|+ ||.++++.|+++|++|+++++..... ..+..+.+ ... .+.++.++.
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~---------------l~~~~~eL~~~~~~~g~~v~~v~ 736 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQ---------------VTDYYQSIYAKYGAKGSTLIVVP 736 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHH---------------HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHH---------------HHHHHHHHHHHhhcCCCeEEEEE
Confidence 467899999999998 99999999999999999985432211 11111111 111 135788999
Q ss_pred cccCChHHHHHHhhh---------c--CCCEEEEcccccCcc-c-cccc--ccccchhhhhhHHHHHHHHHHHHHcC---
Q 011706 159 GDICDFEFLSESFKS---------F--EPDAVVHFGEQRSAP-Y-SMID--RSRAVFTQHNNVIGTLNVLFAMKEFR--- 220 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~---------~--~~D~Vih~A~~~~~~-~-~~~~--~~~~~~~~~~Nv~g~~~ll~~a~~~g--- 220 (479)
+|++|.++++++++. + ++|+||||||+.... . ...+ .+++.+++++|+.|+.+++++++...
T Consensus 737 ~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~ 816 (1887)
T 2uv8_A 737 FNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIE 816 (1887)
T ss_dssp CCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCC
T ss_pred ecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999888763 2 499999999976543 2 2223 56788999999999999999884322
Q ss_pred --CcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHH-HHHHHHHhC--CceEEeecC
Q 011706 221 --QECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHN-IAFTCKAWG--IRATDLNQG 295 (479)
Q Consensus 221 --~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~g--l~~~ivRp~ 295 (479)
...+||++||...+. + ....|+.||++.+.+ .+.++.+++ ++++++.||
T Consensus 817 ~~~~G~IVnISS~ag~~------------------------g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG 870 (1887)
T 2uv8_A 817 TRPAQVILPMSPNHGTF------------------------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIG 870 (1887)
T ss_dssp SCCEEEEEEECSCTTCS------------------------S--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEEC
T ss_pred hCCCCEEEEEcChHhcc------------------------C--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEec
Confidence 113899999953221 1 246899999999998 666666554 999999999
Q ss_pred eeec
Q 011706 296 VVYG 299 (479)
Q Consensus 296 ~v~G 299 (479)
.|.|
T Consensus 871 ~V~t 874 (1887)
T 2uv8_A 871 WTRG 874 (1887)
T ss_dssp CEEC
T ss_pred cccc
Confidence 9985
No 313
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.8e-15 Score=165.05 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=126.7
Q ss_pred CCCCCcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhc-cc--CCCceeEE
Q 011706 82 DPSKAKRVMIIGGDGY-CGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK-SL--TGKNIELY 157 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~-iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~v~~v 157 (479)
..+++|++|||||+|+ ||.++++.|+++|++|+++++..... +.+..+.+. .. .+.++.++
T Consensus 472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~---------------lee~a~eL~ael~a~Ga~V~vV 536 (1688)
T 2pff_A 472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQ---------------VTDYYQSIYAKYGAKGSTLIVV 536 (1688)
T ss_dssp CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTT---------------TTTHHHHTTTTTCCTTCEEEEE
T ss_pred cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHH---------------HHHHHHHHHHHhhcCCCeEEEE
Confidence 3467899999999998 99999999999999999885332210 001111111 11 13478899
Q ss_pred EcccCChHHHHHHhhh---------c--CCCEEEEcccccCcc-c-cccc--ccccchhhhhhHHHHHHHHHHHHHc---
Q 011706 158 IGDICDFEFLSESFKS---------F--EPDAVVHFGEQRSAP-Y-SMID--RSRAVFTQHNNVIGTLNVLFAMKEF--- 219 (479)
Q Consensus 158 ~~Dl~d~~~~~~~~~~---------~--~~D~Vih~A~~~~~~-~-~~~~--~~~~~~~~~~Nv~g~~~ll~~a~~~--- 219 (479)
.+|++|.++++++++. + ++|+||||||+.... . ...+ ++++.+++++|+.|+.+++++++..
T Consensus 537 ~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M 616 (1688)
T 2pff_A 537 PFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGI 616 (1688)
T ss_dssp ECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTC
T ss_pred EeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 9999999998888753 2 489999999975433 1 2223 5678889999999999999988331
Q ss_pred --CCcceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHH-HHHHHHHhC--CceEEeec
Q 011706 220 --RQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHN-IAFTCKAWG--IRATDLNQ 294 (479)
Q Consensus 220 --g~~~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~g--l~~~ivRp 294 (479)
....+||++||..... + ....|+.||++.+.+ .+.++++++ ++++.+.|
T Consensus 617 ~krggGrIVnISSiAG~~------------------------G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaP 670 (1688)
T 2pff_A 617 ETRPAQVILPMSPNHGTF------------------------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAII 670 (1688)
T ss_dssp TTSCEEECCCCCSCTTTS------------------------S--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCC
T ss_pred HhCCCCEEEEEEChHhcc------------------------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 1113899999953221 1 246899999999998 454454443 89999999
Q ss_pred CeeecC
Q 011706 295 GVVYGV 300 (479)
Q Consensus 295 ~~v~Gp 300 (479)
|.|.|.
T Consensus 671 G~V~TT 676 (1688)
T 2pff_A 671 GWTRGT 676 (1688)
T ss_dssp CCCCCC
T ss_pred CcCcCC
Confidence 998753
No 314
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.39 E-value=2e-12 Score=154.84 Aligned_cols=177 Identities=14% Similarity=0.108 Sum_probs=121.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYE-VAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~-V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..+|++|||||+|+||..+++.|+++|++ |++++|..... ....+.++.+.. .+.++.++.+|++
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~-------------~~~~~~~~~l~~-~g~~v~~~~~Dvs 1947 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRT-------------GYQARQVREWRR-QGVQVLVSTSNAS 1947 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCS-------------HHHHHHHHHHHH-TTCEEEEECCCSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcch-------------HHHHHHHHHHHh-CCCEEEEEecCCC
Confidence 36899999999999999999999999997 66666643211 001111222221 2457888999999
Q ss_pred ChHHHHHHhhhc----CCCEEEEcccccCcc-cccccccccchhhhhhHHHHHHHHHHHHHcC--CcceEEEeecc-ccc
Q 011706 163 DFEFLSESFKSF----EPDAVVHFGEQRSAP-YSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR--QECHLVKLGTM-GEY 234 (479)
Q Consensus 163 d~~~~~~~~~~~----~~D~Vih~A~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g--~~~~~V~~SS~-~v~ 234 (479)
|.++++++++.. .+|+||||||..... ....+.+++.+++++|+.|+.++.+++.... -+ +||++||. +..
T Consensus 1948 d~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g-~iV~iSS~ag~~ 2026 (2512)
T 2vz8_A 1948 SLDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELD-YFVIFSSVSCGR 2026 (2512)
T ss_dssp SHHHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCC-EEEEECCHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-EEEEecchhhcC
Confidence 999988877643 689999999975432 2334667788999999999999988876542 23 89999994 444
Q ss_pred cCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCC
Q 011706 235 GTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR 301 (479)
Q Consensus 235 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~ 301 (479)
|.+ ....|+.+|+..+.+++.... .|++...+..+.+-+.+
T Consensus 2027 g~~-------------------------g~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~~G 2067 (2512)
T 2vz8_A 2027 GNA-------------------------GQANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGDVG 2067 (2512)
T ss_dssp TCT-------------------------TCHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCTTS
T ss_pred CCC-------------------------CcHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCCcc
Confidence 433 267899999999999986544 49999999887765443
No 315
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.26 E-value=5.9e-11 Score=141.89 Aligned_cols=245 Identities=10% Similarity=0.011 Sum_probs=150.0
Q ss_pred CCCCcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGY-CGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~-iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+++|++|||||+++ ||.++++.|+++|++|++.++....... ..+.+..+.+. ..+.++..+.+|+
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~-----------~~~~~l~~~l~-~~G~~~~~v~~Dv 2200 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRL-----------AFYKQLYRDHA-RFDATLWVVPANM 2200 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHH-----------HHHHHHHHHHC-CTTCEEEEEECCT
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhh-----------HHHHHHHHHHh-hcCCeEEEEEecC
Confidence 368999999999999 9999999999999999999875432000 00111111121 1234678899999
Q ss_pred CChHHHHHHhhh--------c-CCCEEEEccccc----Cc--ccccccccccchh----hhhhHHHHHHHHHHHHHc---
Q 011706 162 CDFEFLSESFKS--------F-EPDAVVHFGEQR----SA--PYSMIDRSRAVFT----QHNNVIGTLNVLFAMKEF--- 219 (479)
Q Consensus 162 ~d~~~~~~~~~~--------~-~~D~Vih~A~~~----~~--~~~~~~~~~~~~~----~~~Nv~g~~~ll~~a~~~--- 219 (479)
+|.++++++++. + ++|++|||||.. .. .....+.+++... +++|+.+++.+++++...
T Consensus 2201 td~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~ 2280 (3089)
T 3zen_D 2201 ASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAE 2280 (3089)
T ss_dssp TCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887642 1 589999999972 11 1111133345445 789999999888877542
Q ss_pred -CCc--ceEEEeeccccccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHH--h--CCceEEe
Q 011706 220 -RQE--CHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA--W--GIRATDL 292 (479)
Q Consensus 220 -g~~--~~~V~~SS~~v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~--gl~~~iv 292 (479)
+.. ..+|..+|. ..+.. .....|+.||++.+.+++.++.+ + +++++.+
T Consensus 2281 ~~~g~~~~ii~~~ss-~~g~~------------------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v 2335 (3089)
T 3zen_D 2281 RDIASRLHVVLPGSP-NRGMF------------------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHA 2335 (3089)
T ss_dssp TTCCCCEEEEEEECS-STTSC------------------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEE
T ss_pred cCCCceeEEEEECCc-ccccC------------------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEE
Confidence 221 122222221 11110 12357999999999999999998 4 5889999
Q ss_pred ecCeeecCCCCchhhhHhhhcccCCCCcccchHHHHHHHHhcCCCeEEecCCCceeccccHHHHHHHHHHHHhCCCC---
Q 011706 293 NQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ--- 369 (479)
Q Consensus 293 Rp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--- 369 (479)
.||.|-+...... . ..... .....+ . .....+|+|.+++.++.....
T Consensus 2336 ~PG~v~tT~l~~~------------~----~~~~~----~~~~~~---------~-r~~~PeEIA~avlfLaS~~a~~~~ 2385 (3089)
T 3zen_D 2336 LIGWTKGTGLMGQ------------N----DAIVS----AVEEAG---------V-TTYTTDEMAAMLLDLCTVETKVAA 2385 (3089)
T ss_dssp ECCCEECSTTTTT------------T----TTTHH----HHGGGS---------C-BCEEHHHHHHHHHHTTSHHHHHHH
T ss_pred eecccCCCccccc------------c----hhHHH----HHHhcC---------C-CCCCHHHHHHHHHHHhChhhhhHh
Confidence 9998875432100 0 00011 111101 1 112789999999987753211
Q ss_pred CCCceEEEeCC--C--CcCHHHHHHHHHH
Q 011706 370 PGEFRVFNQFT--E--QFSVNQLAALVTK 394 (479)
Q Consensus 370 ~g~~~~~ni~~--~--~~s~~el~~~i~~ 394 (479)
.++.-..++.| . .+.+.++...+.+
T Consensus 2386 ~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2386 AGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp HHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred cCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 12212344444 2 3788888886643
No 316
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=99.10 E-value=4.1e-10 Score=92.00 Aligned_cols=95 Identities=19% Similarity=0.100 Sum_probs=74.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.+++|+|+|+ |++|..+++.|++.| ++|++++|.... .+.+. ..++..+.+|+++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~--------------------~~~~~---~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAA--------------------LAVLN---RMGVATKQVDAKD 59 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHH--------------------HHHHH---TTTCEEEECCTTC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHH--------------------HHHHH---hCCCcEEEecCCC
Confidence 4689999999 999999999999999 999999985431 11111 2467889999999
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEE
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVK 227 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~ 227 (479)
.+.+.++++ ++|+|||+++.. ...++++++.+.|+. +|..
T Consensus 60 ~~~~~~~~~--~~d~vi~~~~~~---------------------~~~~~~~~~~~~g~~-~~~~ 99 (118)
T 3ic5_A 60 EAGLAKALG--GFDAVISAAPFF---------------------LTPIIAKAAKAAGAH-YFDL 99 (118)
T ss_dssp HHHHHHHTT--TCSEEEECSCGG---------------------GHHHHHHHHHHTTCE-EECC
T ss_pred HHHHHHHHc--CCCEEEECCCch---------------------hhHHHHHHHHHhCCC-EEEe
Confidence 999999998 899999998520 135788899998865 4443
No 317
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=99.10 E-value=1.9e-10 Score=111.97 Aligned_cols=170 Identities=14% Similarity=0.194 Sum_probs=113.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEecc----cccccccccCCCCCCccchhhhhhhhhcccCCCce
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY-------EVAIVDSL----IRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNI 154 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~-------~V~~~dr~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 154 (479)
.++|+||||+||||.+++..|+..|. +|+++|+. .... ......+.+.. .
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~----------------~g~~~dl~~~~---~ 65 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKAL----------------QGVMMEIDDCA---F 65 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHH----------------HHHHHHHHTTT---C
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccc----------------hhhHHHHhhhc---c
Confidence 57899999999999999999999885 79998875 2100 00111121110 1
Q ss_pred eEEEcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeec-cc
Q 011706 155 ELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGT-MG 232 (479)
Q Consensus 155 ~~v~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS-~~ 232 (479)
.+ ..|+...+++.++++ +.|+|||+||....+.. +. ..++..|+.+++++++.+.+.+ .+.+||++|. ..
T Consensus 66 ~~-~~~i~~~~~~~~al~--~aD~Vi~~ag~~~~~g~--~r---~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~ 137 (329)
T 1b8p_A 66 PL-LAGMTAHADPMTAFK--DADVALLVGARPRGPGM--ER---KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPAN 137 (329)
T ss_dssp TT-EEEEEEESSHHHHTT--TCSEEEECCCCCCCTTC--CH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred cc-cCcEEEecCcHHHhC--CCCEEEEeCCCCCCCCC--CH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchH
Confidence 11 245555566788888 89999999996432211 11 2357899999999999999985 7778999986 11
Q ss_pred c--ccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecC
Q 011706 233 E--YGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV 300 (479)
Q Consensus 233 v--~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp 300 (479)
+ |-... ..+. +| +...|+.+++...++...+++..|++...++..+|+|.
T Consensus 138 ~~t~~~~~--~~~~--------------~p--~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~ 189 (329)
T 1b8p_A 138 TNAYIAMK--SAPS--------------LP--AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGN 189 (329)
T ss_dssp HHHHHHHH--TCTT--------------SC--GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred HHHHHHHH--HcCC--------------CC--HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEec
Confidence 1 00000 0000 11 22458888888888888888888988888887778884
No 318
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=98.92 E-value=2.1e-10 Score=109.65 Aligned_cols=114 Identities=17% Similarity=0.180 Sum_probs=80.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|++|||||+|++|++++..|+++|++|++++|..... .+..+.+... .++.++.+|++
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~----------------~~l~~~~~~~--~~~~~~~~D~~ 177 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA----------------QAAADSVNKR--FKVNVTAAETA 177 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH----------------HHHHHHHHHH--HTCCCEEEECC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHH----------------HHHHHHHHhc--CCcEEEEecCC
Confidence 35789999999999999999999999999999998854311 1111111111 14667889999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCc--ccccccc-cccchhhhhhHHHHH-----HHHHHH
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSA--PYSMIDR-SRAVFTQHNNVIGTL-----NVLFAM 216 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~--~~~~~~~-~~~~~~~~~Nv~g~~-----~ll~~a 216 (479)
+.+++.++++ .+|+|||||+.... +....+. .++..++++|+.++. .+++.+
T Consensus 178 ~~~~~~~~~~--~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~~i~~t~ll~~a 237 (287)
T 1lu9_A 178 DDASRAEAVK--GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKG 237 (287)
T ss_dssp SHHHHHHHTT--TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSCSBTTSCTTCEE
T ss_pred CHHHHHHHHH--hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhHHhhcchHHhhc
Confidence 9999999998 78999999975321 1111222 445567888888876 556555
No 319
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.86 E-value=1.2e-08 Score=99.03 Aligned_cols=116 Identities=12% Similarity=0.016 Sum_probs=80.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCC-ceeEEEccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGK-NIELYIGDI 161 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~~Dl 161 (479)
++++|+||||+||+|..++..|+.+| ++|+++|+.... . ...++...... .+ .+ +
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~--~----------------~~~dL~~~~~~~~v---~~-~ 64 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP--G----------------VTADISHMDTGAVV---RG-F 64 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH--H----------------HHHHHHTSCSSCEE---EE-E
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH--h----------------HHHHhhcccccceE---EE-E
Confidence 35789999999999999999999998 789999864320 0 01111111111 22 22 3
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
.+.+++.++++ +.|+|||+||......... ..++..|+.+++++++.+.+.+.+ .+|+++|
T Consensus 65 ~~t~d~~~al~--gaDvVi~~ag~~~~~g~~r-----~dl~~~N~~~~~~i~~~i~~~~p~-~~viv~S 125 (326)
T 1smk_A 65 LGQQQLEAALT--GMDLIIVPAGVPRKPGMTR-----DDLFKINAGIVKTLCEGIAKCCPR-AIVNLIS 125 (326)
T ss_dssp ESHHHHHHHHT--TCSEEEECCCCCCCSSCCC-----SHHHHHHHHHHHHHHHHHHHHCTT-SEEEECC
T ss_pred eCCCCHHHHcC--CCCEEEEcCCcCCCCCCCH-----HHHHHHHHHHHHHHHHHHHhhCCC-eEEEEEC
Confidence 34566788888 8999999999643221111 235789999999999999999877 6666666
No 320
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=98.81 E-value=3.5e-08 Score=95.79 Aligned_cols=96 Identities=14% Similarity=-0.030 Sum_probs=67.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHH-hCCCeEEEEecccccccccccCCCCCCc-cchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLS-NKGYEVAIVDSLIRRLFDHQLGLDSLTP-IASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll-~~G~~V~~~dr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+|++|||||+++||.+.+..|+ +.|..|+++.+...+... +... -........+..+..+.....+.+|++
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~------~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~ 122 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSET------KYGTPGWYNNLAFDEAAKREGLYSVTIDGDAF 122 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSS------SCCCHHHHHHHHHHHHHHHHTCCEEEEESCTT
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCccccc------ccccccchhHHHHHHHHHHcCCCceeEeCCCC
Confidence 47999999999999999999998 679999988775432111 0000 000111122222334568899999999
Q ss_pred ChHHHHHHhhhc-----CCCEEEEccccc
Q 011706 163 DFEFLSESFKSF-----EPDAVVHFGEQR 186 (479)
Q Consensus 163 d~~~~~~~~~~~-----~~D~Vih~A~~~ 186 (479)
+.+.++++++.. ++|+|||++|..
T Consensus 123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 123 SDEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 999888887754 699999999964
No 321
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=98.81 E-value=8.8e-09 Score=99.37 Aligned_cols=171 Identities=15% Similarity=0.148 Sum_probs=101.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEec--ccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY--EVAIVDS--LIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
++|+||||+||+|.+++..|+..|. ++.++|+ ....... ....+.......+..+.+...|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~-------------~~~dl~~~~~~~~~~~~i~~~~-- 65 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEG-------------LREDIYDALAGTRSDANIYVES-- 65 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHH-------------HHHHHHHHHTTSCCCCEEEEEE--
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHH-------------HHHHHHHhHHhcCCCeEEEeCC--
Confidence 4899999999999999999999874 6888886 3210000 0000111111111222222211
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCCCCCCc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIE 242 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~~~~~~ 242 (479)
+++.++++ ++|+|||+||....+.. + -..++..|+.+++++++++++.+ + .+|+++|--+.-....-..
T Consensus 66 --d~l~~al~--gaD~Vi~~Ag~~~~~g~--~---r~dl~~~N~~i~~~i~~~i~~~~-~-~~vlv~SNPv~~~t~~~~k 134 (313)
T 1hye_A 66 --DENLRIID--ESDVVIITSGVPRKEGM--S---RMDLAKTNAKIVGKYAKKIAEIC-D-TKIFVITNPVDVMTYKALV 134 (313)
T ss_dssp --TTCGGGGT--TCSEEEECCSCCCCTTC--C---HHHHHHHHHHHHHHHHHHHHHHC-C-CEEEECSSSHHHHHHHHHH
T ss_pred --cchHHHhC--CCCEEEECCCCCCCCCC--c---HHHHHHHHHHHHHHHHHHHHHhC-C-eEEEEecCcHHHHHHHHHH
Confidence 22455677 89999999996432211 1 12357899999999999999998 7 6666666211100000000
Q ss_pred CCceeecCCCCCCCCCCCCCCCchhhh-hhHHHHHHHHHHHHHhCCceEEeecCeeec
Q 011706 243 EGYITINHNGRTDTLPYPKQASSFYHL-SKVHDSHNIAFTCKAWGIRATDLNQGVVYG 299 (479)
Q Consensus 243 e~~~~~~~~~~~~~~~~~~~~~~~Y~~-sK~~~E~~~~~~~~~~gl~~~ivRp~~v~G 299 (479)
.. ...+...++. +.+...++...+++..|++..-++. .|+|
T Consensus 135 ~~---------------~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G 176 (313)
T 1hye_A 135 DS---------------KFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIG 176 (313)
T ss_dssp HH---------------CCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEE
T ss_pred hh---------------CcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEee
Confidence 00 1123456777 6766778877788888887666665 4555
No 322
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.69 E-value=9.3e-08 Score=80.70 Aligned_cols=101 Identities=17% Similarity=0.138 Sum_probs=71.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++++|+|+|+ |.+|..+++.|.+.|++|+++++.... .+.+ ...+...+.+|.++.
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~--------------------~~~~---~~~~~~~~~~d~~~~ 60 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK--------------------VNAY---ASYATHAVIANATEE 60 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH--------------------HHTT---TTTCSEEEECCTTCH
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH--------------------HHHH---HHhCCEEEEeCCCCH
Confidence 4678999998 999999999999999999999875321 1111 112456788999998
Q ss_pred HHHHHH-hhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecc
Q 011706 165 EFLSES-FKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTM 231 (479)
Q Consensus 165 ~~~~~~-~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~ 231 (479)
+.+.++ +. ++|+||++++.. .+.|. .+.+.+++.++. ++|..++.
T Consensus 61 ~~l~~~~~~--~~d~vi~~~~~~---------------~~~~~----~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 61 NELLSLGIR--NFEYVIVAIGAN---------------IQAST----LTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp HHHHTTTGG--GCSEEEECCCSC---------------HHHHH----HHHHHHHHTTCS-EEEEECCS
T ss_pred HHHHhcCCC--CCCEEEECCCCc---------------hHHHH----HHHHHHHHcCCC-eEEEEeCC
Confidence 877765 55 799999998620 02233 466777888876 77766653
No 323
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.66 E-value=1.2e-08 Score=97.98 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=74.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEec--ccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY--EVAIVDS--LIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
++|+||||+|++|..++..|+..|. ++.++|+ ....... ....+..... ....+.+...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~-------------~~~dl~~~~~-~~~~~~v~~~--- 63 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVG-------------QAADTNHGIA-YDSNTRVRQG--- 63 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHH-------------HHHHHHHHHT-TTCCCEEEEC---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHH-------------HHHHHHHHHh-hCCCcEEEeC---
Confidence 5899999999999999999999875 6888887 3211000 0000111111 1123333332
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
+ .++++ +.|+|||+||....+.... ..++..|+.+++++++++++.+.+ .+|+++|
T Consensus 64 ~----~~a~~--~aDvVi~~ag~~~~~g~~r-----~dl~~~N~~i~~~i~~~i~~~~p~-~~viv~S 119 (303)
T 1o6z_A 64 G----YEDTA--GSDVVVITAGIPRQPGQTR-----IDLAGDNAPIMEDIQSSLDEHNDD-YISLTTS 119 (303)
T ss_dssp C----GGGGT--TCSEEEECCCCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHTTCSC-CEEEECC
T ss_pred C----HHHhC--CCCEEEEcCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHHCCC-cEEEEeC
Confidence 2 33466 8999999999643222111 235789999999999999999887 6666666
No 324
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.55 E-value=3.8e-07 Score=76.91 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=57.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++++|+|+|+ |.+|.++++.|.+.|++|+++|+... ..+.+.. .++.++.+|.+++
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~--------------------~~~~~~~---~~~~~~~gd~~~~ 60 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKE--------------------KIELLED---EGFDAVIADPTDE 60 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHH--------------------HHHHHHH---TTCEEEECCTTCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHH--------------------HHHHHHH---CCCcEEECCCCCH
Confidence 3678999998 99999999999999999999998543 1222211 3577899999999
Q ss_pred HHHHHHhhhcCCCEEEEccc
Q 011706 165 EFLSESFKSFEPDAVVHFGE 184 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~ 184 (479)
+.++++--. ++|+||.+.+
T Consensus 61 ~~l~~~~~~-~~d~vi~~~~ 79 (141)
T 3llv_A 61 SFYRSLDLE-GVSAVLITGS 79 (141)
T ss_dssp HHHHHSCCT-TCSEEEECCS
T ss_pred HHHHhCCcc-cCCEEEEecC
Confidence 988876221 7899998764
No 325
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.55 E-value=4.5e-07 Score=90.66 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=62.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKG---YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G---~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+++|+|+|| |+||+.+++.|++.| .+|++++|..... .+..+.+....+.++..+.+|++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~----------------~~la~~l~~~~~~~~~~~~~D~~ 63 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKC----------------QEIAQSIKAKGYGEIDITTVDAD 63 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHH----------------HHHHHHHHHTTCCCCEEEECCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHH----------------HHHHHHhhhhcCCceEEEEecCC
Confidence 468999999 999999999999998 3899988864321 11112222111236888999999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~ 185 (479)
|.++++++++..++|+||||++.
T Consensus 64 d~~~l~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 64 SIEELVALINEVKPQIVLNIALP 86 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECSCG
T ss_pred CHHHHHHHHHhhCCCEEEECCCc
Confidence 99999999996569999999973
No 326
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.51 E-value=2.2e-07 Score=93.99 Aligned_cols=114 Identities=14% Similarity=0.091 Sum_probs=75.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++++|+|+| +|++|+++++.|++.|++|++++|.... .+.+... ..++..+.+|++|.
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~--------------------a~~la~~-~~~~~~~~~Dv~d~ 59 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLES--------------------AKKLSAG-VQHSTPISLDVNDD 59 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHH--------------------HHHTTTT-CTTEEEEECCTTCH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHH--------------------HHHHHHh-cCCceEEEeecCCH
Confidence 468999998 7999999999999999999999885431 1111111 12467888999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCccccccccccc-chhhh--hhHHHHHHHHHHHHHcCCc
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRA-VFTQH--NNVIGTLNVLFAMKEFRQE 222 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~-~~~~~--~Nv~g~~~ll~~a~~~g~~ 222 (479)
+++.++++ ++|+||||++......-....... ..++. ....++.+++++|++.|+.
T Consensus 60 ~~l~~~l~--~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~ 118 (450)
T 1ff9_A 60 AALDAEVA--KHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT 118 (450)
T ss_dssp HHHHHHHT--TSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred HHHHHHHc--CCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence 99999998 899999999853211000000000 00111 1134678999999998843
No 327
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=98.41 E-value=8e-07 Score=80.49 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=55.6
Q ss_pred CCCcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhc
Q 011706 84 SKAKRVMIIGG----------------DGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147 (479)
Q Consensus 84 ~~~~~vLVtGa----------------tG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (479)
+++|+|||||| +|.+|.++++.|+++|++|+++++...- .
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l------~------------------ 61 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL------P------------------ 61 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC------C------------------
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc------c------------------
Confidence 57899999999 7999999999999999999998764310 0
Q ss_pred ccCCCceeEEEcccCChHHHHHHh-hhc-CCCEEEEcccccC
Q 011706 148 SLTGKNIELYIGDICDFEFLSESF-KSF-EPDAVVHFGEQRS 187 (479)
Q Consensus 148 ~~~~~~v~~v~~Dl~d~~~~~~~~-~~~-~~D~Vih~A~~~~ 187 (479)
...++. ..|+++.+++.+.+ +.+ ++|++|||||+..
T Consensus 62 --~~~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 62 --TPPFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp --CCTTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred --cCCCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCcccC
Confidence 001222 46888876554443 222 6999999999764
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.40 E-value=1.9e-06 Score=72.12 Aligned_cols=98 Identities=16% Similarity=0.213 Sum_probs=68.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+|+|+|+|+ |++|..+++.|.+.|++|+++++.... .+.+... .++.++.+|.++.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~--------------------~~~~~~~--~~~~~~~~d~~~~~ 60 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI--------------------CKKASAE--IDALVINGDCTKIK 60 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHH--CSSEEEESCTTSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH--------------------HHHHHHh--cCcEEEEcCCCCHH
Confidence 578999987 999999999999999999999875331 1111110 14567889999888
Q ss_pred HHHHH-hhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 166 FLSES-FKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 166 ~~~~~-~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
.+.+. ++ ++|+||++... ...|. .+.+.++..+.+ ++|..+
T Consensus 61 ~l~~~~~~--~~d~vi~~~~~----------------~~~~~----~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 61 TLEDAGIE--DADMYIAVTGK----------------EEVNL----MSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp HHHHTTTT--TCSEEEECCSC----------------HHHHH----HHHHHHHHTTCC-CEEEEC
T ss_pred HHHHcCcc--cCCEEEEeeCC----------------chHHH----HHHHHHHHcCCC-EEEEEe
Confidence 77655 44 79999999641 01232 456677777776 776544
No 329
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.40 E-value=2.5e-06 Score=72.95 Aligned_cols=77 Identities=18% Similarity=0.343 Sum_probs=58.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
.++|+|+|+ |.+|.++++.|.+.|++|+++++.... +.+.+......++.++.+|.++++
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~-------------------~~~~~~~~~~~~~~~i~gd~~~~~ 62 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED-------------------DIKQLEQRLGDNADVIPGDSNDSS 62 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH-------------------HHHHHHHHHCTTCEEEESCTTSHH
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChH-------------------HHHHHHHhhcCCCeEEEcCCCCHH
Confidence 568999997 999999999999999999999975311 111111111246889999999999
Q ss_pred HHHHH-hhhcCCCEEEEccc
Q 011706 166 FLSES-FKSFEPDAVVHFGE 184 (479)
Q Consensus 166 ~~~~~-~~~~~~D~Vih~A~ 184 (479)
.+.++ ++ +.|+||-+.+
T Consensus 63 ~l~~a~i~--~ad~vi~~~~ 80 (153)
T 1id1_A 63 VLKKAGID--RCRAILALSD 80 (153)
T ss_dssp HHHHHTTT--TCSEEEECSS
T ss_pred HHHHcChh--hCCEEEEecC
Confidence 98887 66 7999997764
No 330
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=98.35 E-value=1.1e-06 Score=79.71 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=53.4
Q ss_pred CCcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcc
Q 011706 85 KAKRVMIIGG----------------DGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148 (479)
Q Consensus 85 ~~~~vLVtGa----------------tG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (479)
+||+|||||| +|.+|.++++.|+++|++|+++++..... +
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-----------~------------- 57 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-----------P------------- 57 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-----------C-------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------c-------------
Confidence 4899999999 99999999999999999999998753210 0
Q ss_pred cCCCceeEEEcccCChHHHHHHhh-hc-CCCEEEEcccccCc
Q 011706 149 LTGKNIELYIGDICDFEFLSESFK-SF-EPDAVVHFGEQRSA 188 (479)
Q Consensus 149 ~~~~~v~~v~~Dl~d~~~~~~~~~-~~-~~D~Vih~A~~~~~ 188 (479)
....++..+ |+...+++.+.+. .. ++|++||+||....
T Consensus 58 ~~~~~~~~~--~v~s~~em~~~v~~~~~~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 58 EPHPNLSIR--EITNTKDLLIEMQERVQDYQVLIHSMAVSDY 97 (232)
T ss_dssp CCCTTEEEE--ECCSHHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred cCCCCeEEE--EHhHHHHHHHHHHHhcCCCCEEEEcCccccc
Confidence 001234443 4545544433322 22 69999999997654
No 331
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.35 E-value=8e-06 Score=69.92 Aligned_cols=76 Identities=29% Similarity=0.332 Sum_probs=57.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
..+++|+|+|+ |.+|..+++.|.+.|++|+++++.... .+.+.. ..++..+.+|.++
T Consensus 17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~--------------------~~~~~~--~~g~~~~~~d~~~ 73 (155)
T 2g1u_A 17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYA--------------------FHRLNS--EFSGFTVVGDAAE 73 (155)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG--------------------GGGSCT--TCCSEEEESCTTS
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH--------------------HHHHHh--cCCCcEEEecCCC
Confidence 35789999997 999999999999999999999875431 111110 1356677899888
Q ss_pred hHHHHHH-hhhcCCCEEEEccc
Q 011706 164 FEFLSES-FKSFEPDAVVHFGE 184 (479)
Q Consensus 164 ~~~~~~~-~~~~~~D~Vih~A~ 184 (479)
.+.+.++ +. ++|+||.+.+
T Consensus 74 ~~~l~~~~~~--~ad~Vi~~~~ 93 (155)
T 2g1u_A 74 FETLKECGME--KADMVFAFTN 93 (155)
T ss_dssp HHHHHTTTGG--GCSEEEECSS
T ss_pred HHHHHHcCcc--cCCEEEEEeC
Confidence 8777665 55 7899998865
No 332
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.31 E-value=8.6e-07 Score=89.89 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=74.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+++++|+|+|+ |++|+.++..|++. |++|++++|.... ++.+... .++..+.+|+
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~k--------------------a~~la~~--~~~~~~~~D~ 76 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLAN--------------------AQALAKP--SGSKAISLDV 76 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHH--------------------HHHHHGG--GTCEEEECCT
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHH--------------------HHHHHHh--cCCcEEEEec
Confidence 456889999998 99999999999998 7899999885431 1111111 2466778999
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCccc-ccccccccchhhhhhH--HHHHHHHHHHHHcCC
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPY-SMIDRSRAVFTQHNNV--IGTLNVLFAMKEFRQ 221 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv--~g~~~ll~~a~~~g~ 221 (479)
.|.+++.++++ ++|+|||+++...... .......-..+++++. ..+..++++|++.|+
T Consensus 77 ~d~~~l~~~l~--~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv 137 (467)
T 2axq_A 77 TDDSALDKVLA--DNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI 137 (467)
T ss_dssp TCHHHHHHHHH--TSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHc--CCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence 99999999988 8999999998532110 0000000011223332 345778888888874
No 333
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.31 E-value=4.7e-06 Score=80.13 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=78.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCC-ceeEEEcccCC
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGK-NIELYIGDICD 163 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~~Dl~d 163 (479)
|+|.|+||+|++|..++..|+..| .+|+++|+.... ....++.+.... ++....+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~------------------~~a~dL~~~~~~~~l~~~~~---- 58 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP------------------GVAADLSHIETRATVKGYLG---- 58 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH------------------HHHHHHTTSSSSCEEEEEES----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH------------------HHHHHHhccCcCceEEEecC----
Confidence 489999999999999999999888 789999985410 011122111111 1222111
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
.++++++++ +.|+||++||....+.... ...+..|+..++.+++.+.+.+...+||++|-
T Consensus 59 t~d~~~a~~--~aDvVvi~ag~~~~~g~~r-----~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 59 PEQLPDCLK--GCDVVVIPAGVPRKPGMTR-----DDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp GGGHHHHHT--TCSEEEECCSCCCCTTCCG-----GGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCHHHHhC--CCCEEEECCCcCCCCCCcH-----HHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 234777788 8999999999643222111 23468899999999999999887768888654
No 334
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=98.25 E-value=1.1e-06 Score=84.95 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=76.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--e-----EEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEE
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY--E-----VAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYI 158 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~--~-----V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 158 (479)
.++|+||||+|+||.+++..|+..|. + ++++|+..... .......++.+....-+.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~--------------~~~g~a~DL~~~~~~~~~--- 65 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMG--------------VLDGVLMELQDCALPLLK--- 65 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHH--------------HHHHHHHHHHHTCCTTEE---
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccc--------------cchhhHhhhHhhhhcccC---
Confidence 36899999999999999999998874 5 88888753100 000111122221111111
Q ss_pred cccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcc-eEEEeec
Q 011706 159 GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQEC-HLVKLGT 230 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~-~~V~~SS 230 (479)
++...+...+.++ +.|+|||+||....+...+ ...++.|+..++++++++++.+.+. +++.+|-
T Consensus 66 -~~~~~~~~~~~~~--daDvVvitAg~prkpG~tR-----~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 66 -DVIATDKEEIAFK--DLDVAILVGSMPRRDGMER-----KDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp -EEEEESCHHHHTT--TCSEEEECCSCCCCTTCCT-----TTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred -CEEEcCCcHHHhC--CCCEEEEeCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 2222233566677 8999999998643222111 3357889999999999999998764 4666664
No 335
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.24 E-value=5.1e-06 Score=81.89 Aligned_cols=96 Identities=22% Similarity=0.239 Sum_probs=70.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..+.|+|+|.|| |++|+.+++.|.+ .++|.+.|+..+. ++.. ...+..+..|+.
T Consensus 13 ~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~--------------------~~~~----~~~~~~~~~d~~ 66 (365)
T 3abi_A 13 EGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNEN--------------------LEKV----KEFATPLKVDAS 66 (365)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHH--------------------HHHH----TTTSEEEECCTT
T ss_pred cCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHH--------------------HHHH----hccCCcEEEecC
Confidence 345678999998 9999999998865 5899998875432 1111 135677889999
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
|.+++.++++ +.|+||++++.. . ...++++|.+.| +++|=+|
T Consensus 67 d~~~l~~~~~--~~DvVi~~~p~~-----~----------------~~~v~~~~~~~g--~~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMK--EFELVIGALPGF-----L----------------GFKSIKAAIKSK--VDMVDVS 108 (365)
T ss_dssp CHHHHHHHHT--TCSEEEECCCGG-----G----------------HHHHHHHHHHHT--CEEEECC
T ss_pred CHHHHHHHHh--CCCEEEEecCCc-----c----------------cchHHHHHHhcC--cceEeee
Confidence 9999999998 789999998631 0 126888999988 4666655
No 336
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.10 E-value=1e-05 Score=71.29 Aligned_cols=74 Identities=16% Similarity=0.126 Sum_probs=57.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.+++|+|+|+ |.+|..+++.|.+. |++|+++|+.... .+.+. ..++..+.+|.++
T Consensus 38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~--------------------~~~~~---~~g~~~~~gd~~~ 93 (183)
T 3c85_A 38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEA--------------------AQQHR---SEGRNVISGDATD 93 (183)
T ss_dssp TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHH--------------------HHHHH---HTTCCEEECCTTC
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHH--------------------HHHHH---HCCCCEEEcCCCC
Confidence 4678999985 99999999999999 9999999985431 11221 1357788899999
Q ss_pred hHHHHHH--hhhcCCCEEEEccc
Q 011706 164 FEFLSES--FKSFEPDAVVHFGE 184 (479)
Q Consensus 164 ~~~~~~~--~~~~~~D~Vih~A~ 184 (479)
.+.+.++ ++ ++|+||.+.+
T Consensus 94 ~~~l~~~~~~~--~ad~vi~~~~ 114 (183)
T 3c85_A 94 PDFWERILDTG--HVKLVLLAMP 114 (183)
T ss_dssp HHHHHTBCSCC--CCCEEEECCS
T ss_pred HHHHHhccCCC--CCCEEEEeCC
Confidence 8877776 55 7899998764
No 337
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.99 E-value=3.4e-05 Score=64.72 Aligned_cols=73 Identities=10% Similarity=0.202 Sum_probs=57.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
.++|+|+|+ |.+|..+++.|.+.|++|+++|+... +.+.+.. .++.++.+|.++++
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~--------------------~~~~~~~---~g~~~i~gd~~~~~ 62 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRT--------------------RVDELRE---RGVRAVLGNAANEE 62 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHH--------------------HHHHHHH---TTCEEEESCTTSHH
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHH--------------------HHHHHHH---cCCCEEECCCCCHH
Confidence 457999997 99999999999999999999998643 2222221 46788999999999
Q ss_pred HHHHH-hhhcCCCEEEEccc
Q 011706 166 FLSES-FKSFEPDAVVHFGE 184 (479)
Q Consensus 166 ~~~~~-~~~~~~D~Vih~A~ 184 (479)
.++++ ++ +.|+||-+.+
T Consensus 63 ~l~~a~i~--~ad~vi~~~~ 80 (140)
T 3fwz_A 63 IMQLAHLE--CAKWLILTIP 80 (140)
T ss_dssp HHHHTTGG--GCSEEEECCS
T ss_pred HHHhcCcc--cCCEEEEECC
Confidence 88775 34 6899997754
No 338
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.97 E-value=2.2e-05 Score=76.03 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=75.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhccc--CCCceeEEE
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL--TGKNIELYI 158 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~ 158 (479)
.+.+++|.|+|++|++|..++..|+..| .+|+++|........ ...++.+. ...++.+
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g----------------~a~DL~~~~~~~~~i~~-- 66 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEG----------------VAEEIRHCGFEGLNLTF-- 66 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHH----------------HHHHHHHHCCTTCCCEE--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHH----------------HHHhhhhCcCCCCceEE--
Confidence 4567899999999999999999999998 489999975431111 11111111 1112221
Q ss_pred cccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcce-EEEeec
Q 011706 159 GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECH-LVKLGT 230 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~-~V~~SS 230 (479)
..+..++++ +.|+||.+||....+...+ ...+..|+...+.+.+.+.+.+.+.. ++.+|-
T Consensus 67 -----t~d~~~al~--dADvVvitaG~p~kpG~~R-----~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 67 -----TSDIKEALT--DAKYIVSSGGAPRKEGMTR-----EDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127 (343)
T ss_dssp -----ESCHHHHHT--TEEEEEECCC-------CH-----HHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred -----cCCHHHHhC--CCCEEEEccCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence 123566777 8999999999643222111 23578899999999999999887754 555553
No 339
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.83 E-value=9.2e-05 Score=67.09 Aligned_cols=73 Identities=22% Similarity=0.287 Sum_probs=56.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
|+|+|+|+ |.+|.++++.|.+.|++|+++|+... ..+.+... .++.++.+|.++++.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~--------------------~~~~l~~~--~~~~~i~gd~~~~~~ 57 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRE--------------------LCEEFAKK--LKATIIHGDGSHKEI 57 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHH--------------------HHHHHHHH--SSSEEEESCTTSHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH--------------------HHHHHHHH--cCCeEEEcCCCCHHH
Confidence 57999997 99999999999999999999997543 12222111 257789999999998
Q ss_pred HHHH-hhhcCCCEEEEccc
Q 011706 167 LSES-FKSFEPDAVVHFGE 184 (479)
Q Consensus 167 ~~~~-~~~~~~D~Vih~A~ 184 (479)
++++ ++ +.|+||-+.+
T Consensus 58 l~~a~i~--~ad~vi~~~~ 74 (218)
T 3l4b_C 58 LRDAEVS--KNDVVVILTP 74 (218)
T ss_dssp HHHHTCC--TTCEEEECCS
T ss_pred HHhcCcc--cCCEEEEecC
Confidence 8877 45 7899996653
No 340
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.83 E-value=2e-05 Score=70.29 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+++|||+||+|.||..+++.+...|++|+++++.... .+..... +... ..|+.+.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~--------------------~~~~~~~---g~~~-~~d~~~~ 93 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK--------------------REMLSRL---GVEY-VGDSRSV 93 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH--------------------HHHHHTT---CCSE-EEETTCS
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHH--------------------HHHHHHc---CCCE-EeeCCcH
Confidence 47899999999999999999999999999999875321 1111111 1222 2466665
Q ss_pred HHHHHHhh---hcCCCEEEEccc
Q 011706 165 EFLSESFK---SFEPDAVVHFGE 184 (479)
Q Consensus 165 ~~~~~~~~---~~~~D~Vih~A~ 184 (479)
+..+.+.+ ..++|+||+|+|
T Consensus 94 ~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 94 DFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp THHHHHHHHTTTCCEEEEEECCC
T ss_pred HHHHHHHHHhCCCCCeEEEECCc
Confidence 44444332 226999999987
No 341
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.76 E-value=6.8e-05 Score=68.76 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=55.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
.++|+|+|+ |.+|..+++.|.+.|+ |+++++... ..+.+. .++.++.+|.++++
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~--------------------~~~~~~----~~~~~i~gd~~~~~ 62 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENV--------------------RKKVLR----SGANFVHGDPTRVS 62 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGG--------------------HHHHHH----TTCEEEESCTTCHH
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHH--------------------HHHHHh----cCCeEEEcCCCCHH
Confidence 468999998 9999999999999999 999887533 111221 35889999999999
Q ss_pred HHHHH-hhhcCCCEEEEccc
Q 011706 166 FLSES-FKSFEPDAVVHFGE 184 (479)
Q Consensus 166 ~~~~~-~~~~~~D~Vih~A~ 184 (479)
.++++ ++ +.|.||.+.+
T Consensus 63 ~l~~a~i~--~ad~vi~~~~ 80 (234)
T 2aef_A 63 DLEKANVR--GARAVIVDLE 80 (234)
T ss_dssp HHHHTTCT--TCSEEEECCS
T ss_pred HHHhcCcc--hhcEEEEcCC
Confidence 88877 66 7899997653
No 342
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.67 E-value=3.1e-05 Score=75.68 Aligned_cols=37 Identities=24% Similarity=0.185 Sum_probs=33.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~ 204 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE 204 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH
Confidence 3578999999999999999999999999999998753
No 343
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.65 E-value=0.00021 Score=70.00 Aligned_cols=71 Identities=28% Similarity=0.314 Sum_probs=56.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++++|+|.|+ |++|+.+++.|++. ++|++.+|.... ++.+. .....+..|+.|.
T Consensus 15 ~~~~v~IiGa-G~iG~~ia~~L~~~-~~V~V~~R~~~~--------------------a~~la----~~~~~~~~d~~~~ 68 (365)
T 2z2v_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNEN--------------------LEKVK----EFATPLKVDASNF 68 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHH--------------------HHHHT----TTSEEEECCTTCH
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHcC-CeEEEEECCHHH--------------------HHHHH----hhCCeEEEecCCH
Confidence 5789999997 99999999999998 999999885431 22221 1234567899999
Q ss_pred HHHHHHhhhcCCCEEEEcc
Q 011706 165 EFLSESFKSFEPDAVVHFG 183 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A 183 (479)
+++.++++ ++|+||++.
T Consensus 69 ~~l~~ll~--~~DvVIn~~ 85 (365)
T 2z2v_A 69 DKLVEVMK--EFELVIGAL 85 (365)
T ss_dssp HHHHHHHT--TCSCEEECC
T ss_pred HHHHHHHh--CCCEEEECC
Confidence 99999998 799999985
No 344
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.64 E-value=0.00034 Score=67.24 Aligned_cols=118 Identities=17% Similarity=0.207 Sum_probs=75.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
..++|.|+|+ |++|..++..|+..|. +|+++|+........ ...+.........++.....|.
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~-------------a~DL~~~~~~~~~~v~i~~~~~- 68 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGD-------------VMDLNHGKAFAPQPVKTSYGTY- 68 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHH-------------HHHHHHTGGGSSSCCEEEEECG-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHH-------------HHHHHhccccccCCeEEEeCcH-
Confidence 4678999996 9999999999999986 899999754311110 0001111111112344443331
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
++++ +.|+||.+||....+...+ ...+..|+...+.+.+.+.+.+.+..++.+|-
T Consensus 69 ------~a~~--~aDvVvi~ag~p~kpG~~R-----~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 69 ------EDCK--DADIVCICAGANQKPGETR-----LELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp ------GGGT--TCSEEEECCSCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred ------HHhC--CCCEEEEecccCCCCCccH-----HHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 3455 8999999998643222111 23568899999999999999887766666653
No 345
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.61 E-value=0.00012 Score=72.12 Aligned_cols=76 Identities=22% Similarity=0.239 Sum_probs=57.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.++++|+|+|+ |.||..+++.|...|++|+++|+.... .+......+.. +.+|+.+
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~--------------------~~~~~~~~g~~---~~~~~~~ 219 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKR--------------------LQYLDDVFGGR---VITLTAT 219 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHHTTTS---EEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH--------------------HHHHHHhcCce---EEEecCC
Confidence 56789999999 999999999999999999999985431 11111111112 4567778
Q ss_pred hHHHHHHhhhcCCCEEEEcccc
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~ 185 (479)
.+.+.+++. ++|+||++++.
T Consensus 220 ~~~l~~~~~--~~DvVi~~~g~ 239 (369)
T 2eez_A 220 EANIKKSVQ--HADLLIGAVLV 239 (369)
T ss_dssp HHHHHHHHH--HCSEEEECCC-
T ss_pred HHHHHHHHh--CCCEEEECCCC
Confidence 888988888 79999999985
No 346
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.55 E-value=0.00032 Score=67.37 Aligned_cols=117 Identities=16% Similarity=0.161 Sum_probs=67.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+++|.|+|+ |.+|..++..|+..|. +|+++|+........ ...+....... ..+.....|
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~-------------a~DL~~~~~~~-~~~~i~~~~-- 70 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGD-------------AIDLEDALPFT-SPKKIYSAE-- 70 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHH-------------HHHHHTTGGGS-CCCEEEECC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHH-------------HhhHhhhhhhc-CCcEEEECc--
Confidence 4679999997 9999999999999886 899999754311110 00011111111 234433333
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
.+.++ +.|+||++||....+...+ ...++.|+.-.+.+.+.+.+.+.+..++.+|-
T Consensus 71 -----~~a~~--~aDiVvi~ag~~~kpG~tR-----~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 71 -----YSDAK--DADLVVITAGAPQKPGETR-----LDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp -----GGGGT--TCSEEEECCCCC---------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred -----HHHhc--CCCEEEECCCCCCCCCchH-----HHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 23455 8999999999643222111 23567899999999999999887766666653
No 347
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.55 E-value=0.00021 Score=71.20 Aligned_cols=73 Identities=18% Similarity=0.323 Sum_probs=57.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
+++|+|+|+ |-+|..+++.|.+.|++|+++|+... +++.+. ..++.++.||.++++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~--------------------~v~~~~---~~g~~vi~GDat~~~ 59 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPD--------------------HIETLR---KFGMKVFYGDATRMD 59 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHH--------------------HHHHHH---HTTCCCEESCTTCHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHH--------------------HHHHHH---hCCCeEEEcCCCCHH
Confidence 467999997 99999999999999999999998643 222221 136788999999999
Q ss_pred HHHHH-hhhcCCCEEEEccc
Q 011706 166 FLSES-FKSFEPDAVVHFGE 184 (479)
Q Consensus 166 ~~~~~-~~~~~~D~Vih~A~ 184 (479)
.++++ ++ +.|+||-+..
T Consensus 60 ~L~~agi~--~A~~viv~~~ 77 (413)
T 3l9w_A 60 LLESAGAA--KAEVLINAID 77 (413)
T ss_dssp HHHHTTTT--TCSEEEECCS
T ss_pred HHHhcCCC--ccCEEEECCC
Confidence 88887 55 7899987653
No 348
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.54 E-value=0.00045 Score=63.89 Aligned_cols=124 Identities=19% Similarity=0.134 Sum_probs=72.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCcc-----chhhhhhhhhcccC-CCceeE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPI-----ASIHDRLRCWKSLT-GKNIEL 156 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~v~~ 156 (479)
+++++|+|+|+ |.+|.++++.|++.|. +|+++|+..-...+.. .+.+... .......+.+.... .-.+..
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~--Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~ 105 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQ--RQTLHSDATVGQPKVESARDALTRINPHIAITP 105 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGG--TCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCC--cccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence 34679999997 9999999999999996 8888887541111110 0000000 11111122222221 124556
Q ss_pred EEcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecccccc
Q 011706 157 YIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYG 235 (479)
Q Consensus 157 v~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g 235 (479)
+..+++ .+.+.++++ ++|+||.+.. |...-..+.++|++.+ +.+|+.+..+.+|
T Consensus 106 ~~~~~~-~~~~~~~~~--~~DvVi~~~d--------------------~~~~~~~l~~~~~~~~--~p~i~~~~~g~~g 159 (249)
T 1jw9_B 106 VNALLD-DAELAALIA--EHDLVLDCTD--------------------NVAVRNQLNAGCFAAK--VPLVSGAAIRMEG 159 (249)
T ss_dssp ECSCCC-HHHHHHHHH--TSSEEEECCS--------------------SHHHHHHHHHHHHHHT--CCEEEEEEEBTEE
T ss_pred EeccCC-HhHHHHHHh--CCCEEEEeCC--------------------CHHHHHHHHHHHHHcC--CCEEEeeeccceE
Confidence 666665 355677777 7999998753 2233345667788877 3577766554433
No 349
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.48 E-value=0.00017 Score=69.86 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=33.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 180 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD 180 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3588999999999999999999999999999998753
No 350
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=97.48 E-value=0.00011 Score=71.25 Aligned_cols=37 Identities=19% Similarity=0.056 Sum_probs=33.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~ 180 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE 180 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3578999999999999999999999999999998754
No 351
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.43 E-value=0.0002 Score=70.16 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=32.7
Q ss_pred CC--cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 85 KA--KRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 85 ~~--~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+ ++|||+||+|.||..+++.+...|+ +|+++++..
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~ 196 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH 196 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH
Confidence 46 8999999999999999999999999 999988753
No 352
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.36 E-value=0.00071 Score=64.57 Aligned_cols=84 Identities=19% Similarity=0.151 Sum_probs=56.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+++|++||+|+ |++|+.++..|++.|. +|++++|..+... ...+..+.+.... .+.+...++
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~-------------~a~~la~~~~~~~--~~~~~~~~~ 214 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYA-------------NAEKTVEKINSKT--DCKAQLFDI 214 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHH-------------HHHHHHHHHHHHS--SCEEEEEET
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHH-------------HHHHHHHHhhhhc--CCceEEecc
Confidence 457899999997 8999999999999998 8999988621000 0111111221111 233344566
Q ss_pred CChHHHHHHhhhcCCCEEEEccc
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGE 184 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~ 184 (479)
.+.+.+.+.+. .+|+|||+..
T Consensus 215 ~~~~~l~~~l~--~aDiIINaTp 235 (315)
T 3tnl_A 215 EDHEQLRKEIA--ESVIFTNATG 235 (315)
T ss_dssp TCHHHHHHHHH--TCSEEEECSS
T ss_pred chHHHHHhhhc--CCCEEEECcc
Confidence 67777888887 7999999864
No 353
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.35 E-value=0.0015 Score=62.82 Aligned_cols=117 Identities=16% Similarity=0.195 Sum_probs=75.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccC--CCceeEEEc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLT--GKNIELYIG 159 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~ 159 (479)
...++|.|+|+ |.+|..++..|+..|. +|+++|........ ...++.+.. ......+..
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g----------------~a~DL~~~~~~~~~~~i~~~ 79 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKG----------------EMMDLQHGSLFLKTPKIVSS 79 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHH----------------HHHHHHHTGGGCSCCEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHH----------------HHHhhhhhhhccCCCeEEEc
Confidence 34689999998 9999999999999987 89999875421111 111121110 111122222
Q ss_pred ccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 160 DICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
.|.+ .++ +.|+||.+||...-+...+ ...++.|..-.+.+.+.+.+.+.+..++.+|-
T Consensus 80 --~d~~----~~~--~aDiVvi~aG~~~kpG~tR-----~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 80 --KDYS----VTA--NSKLVIITAGARQQEGESR-----LNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp --SSGG----GGT--TEEEEEECCSCCCCTTCCG-----GGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred --CCHH----HhC--CCCEEEEccCCCCCCCccH-----HHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 1222 355 8999999999654222222 23678899999999999999887767776664
No 354
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.25 E-value=0.0018 Score=62.03 Aligned_cols=119 Identities=14% Similarity=0.106 Sum_probs=74.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEE-Eccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELY-IGDI 161 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~Dl 161 (479)
+++++|.|+|+ |.+|..++..|+..|+ +|+++|+........ ...+............+. ..|
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~-------------~~dl~~~~~~~~~~~~v~~t~d- 69 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGK-------------GLDIAESSPVDGFDAKFTGAND- 69 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHH-------------HHHHHHHHHHHTCCCCEEEESS-
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHH-------------HHHHhchhhhcCCCCEEEEeCC-
Confidence 35679999998 9999999999999998 999999864321110 000111100111122222 123
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
. ++++ +.|+||.+||...-+...+ ...+..|+.-.+.+.+.+.+.+.+..++.+|-
T Consensus 70 --~----~a~~--~aDiVIiaag~p~k~G~~R-----~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 70 --Y----AAIE--GADVVIVTAGVPRKPGMSR-----DDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp --G----GGGT--TCSEEEECCSCCCC----------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred --H----HHHC--CCCEEEEccCcCCCCCCCH-----HHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 2 3566 8999999998643222111 23567899999999999998887767776664
No 355
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.24 E-value=0.0019 Score=61.74 Aligned_cols=121 Identities=19% Similarity=0.193 Sum_probs=76.0
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc--ccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI--RRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIG 159 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 159 (479)
.++.++|.|+|+ |.+|..++..|+..|+ +|+++|+.. ....... .++.+. .............
T Consensus 5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a---------~dl~~~----~~~~~~~~~i~~t 70 (315)
T 3tl2_A 5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKA---------LDMLEA----SPVQGFDANIIGT 70 (315)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHH---------HHHHHH----HHHHTCCCCEEEE
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhh---------hhHHHh----hhhccCCCEEEEc
Confidence 345679999997 9999999999999999 999999862 1111100 001111 0111111222211
Q ss_pred ccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 160 DICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
+ |. +.++ +.|+||-+||....+...+ ...+..|+.-.+.+.+.+.+.+.+..++.+|-
T Consensus 71 ~--d~----~a~~--~aDvVIiaag~p~kpg~~R-----~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 71 S--DY----ADTA--DSDVVVITAGIARKPGMSR-----DDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp S--CG----GGGT--TCSEEEECCSCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred C--CH----HHhC--CCCEEEEeCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 1 22 3455 8999999998643222211 23568899999999999998887767776663
No 356
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.23 E-value=0.0019 Score=61.88 Aligned_cols=115 Identities=14% Similarity=0.063 Sum_probs=74.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhccc---CCCceeEEEcc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL---TGKNIELYIGD 160 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~~D 160 (479)
++++|.|+|+ |.+|..++..|+..|. +|+++|+....... ...++.+. ......+...
T Consensus 4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g----------------~a~dL~~~~~~~~~~~~v~~t- 65 (321)
T 3p7m_A 4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNG----------------KALDLLQTCPIEGVDFKVRGT- 65 (321)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHH----------------HHHHHHTTHHHHTCCCCEEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHH----------------HHHHHHhhhhhcCCCcEEEEc-
Confidence 4678999996 9999999999999987 99999886432111 01111111 1112222211
Q ss_pred cCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 161 ICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 161 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
.|. ++++ +.|+||.+||...-+...+ ...+..|+.-.+.+.+.+.+.+.+..++.+|
T Consensus 66 -~d~----~a~~--~aDvVIi~ag~p~k~G~~R-----~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 66 -NDY----KDLE--NSDVVIVTAGVPRKPGMSR-----DDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp -SCG----GGGT--TCSEEEECCSCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred -CCH----HHHC--CCCEEEEcCCcCCCCCCCH-----HHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 122 3566 8999999998643222111 2356789999999999999988776777665
No 357
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.23 E-value=0.00034 Score=67.50 Aligned_cols=76 Identities=7% Similarity=-0.024 Sum_probs=51.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+++|||+||+|.||..+++.+...|++|+++++.... .+....+ + .. ...|..+.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~--------------------~~~~~~~-g--~~-~~~~~~~~ 195 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK--------------------AQSALKA-G--AW-QVINYREE 195 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHH--------------------HHHHHHH-T--CS-EEEETTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--------------------HHHHHHc-C--CC-EEEECCCc
Confidence 58899999999999999999999999999999875321 1111111 1 11 12466555
Q ss_pred HHHHHHhh---hcCCCEEEEccc
Q 011706 165 EFLSESFK---SFEPDAVVHFGE 184 (479)
Q Consensus 165 ~~~~~~~~---~~~~D~Vih~A~ 184 (479)
+..+++.+ ..++|+||+|+|
T Consensus 196 ~~~~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 196 DLVERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp CHHHHHHHHTTTCCEEEEEECSC
T ss_pred cHHHHHHHHhCCCCceEEEECCc
Confidence 44444332 236999999997
No 358
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.23 E-value=0.00046 Score=66.82 Aligned_cols=37 Identities=24% Similarity=0.221 Sum_probs=33.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||...++.+...|++|+++++..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 183 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3588999999999999999999999999999998753
No 359
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=97.23 E-value=0.0006 Score=66.53 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=33.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~ 205 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTE 205 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3578999999999999999999999999999998754
No 360
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=97.23 E-value=0.0026 Score=59.85 Aligned_cols=125 Identities=17% Similarity=0.126 Sum_probs=73.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccC---CCCCCccchhhhhhhhhcccCC-CceeEE
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLG---LDSLTPIASIHDRLRCWKSLTG-KNIELY 157 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~v~~v 157 (479)
.++..+|+|.|+ |.+|..+++.|++.|. +++++|...=...+.... ...+ .........+.+..+.. -.++.+
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~di-G~~Ka~aa~~~L~~iNP~v~v~~~ 110 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQA-GLSKVQAAEHTLRNINPDVLFEVH 110 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCT-TSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhc-CchHHHHHHHHHHhhCCCcEEEEe
Confidence 456789999998 9999999999999995 788887643111111000 0000 01111122223333322 356677
Q ss_pred EcccCChHHHHHHhhh---------cCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEe
Q 011706 158 IGDICDFEFLSESFKS---------FEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKL 228 (479)
Q Consensus 158 ~~Dl~d~~~~~~~~~~---------~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~ 228 (479)
..++++.+.+++.+.. .++|+||.+.- |...-..+.++|.+.+. .+|+.
T Consensus 111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D--------------------n~~~R~~in~~c~~~~~--Pli~~ 168 (292)
T 3h8v_A 111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD--------------------NFEARMTINTACNELGQ--TWMES 168 (292)
T ss_dssp CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS--------------------SHHHHHHHHHHHHHHTC--CEEEE
T ss_pred cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc--------------------chhhhhHHHHHHHHhCC--CEEEe
Confidence 7788776666666521 27999998742 44444567788888874 57776
Q ss_pred ecc
Q 011706 229 GTM 231 (479)
Q Consensus 229 SS~ 231 (479)
+..
T Consensus 169 gv~ 171 (292)
T 3h8v_A 169 GVS 171 (292)
T ss_dssp EEC
T ss_pred eee
Confidence 543
No 361
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.22 E-value=0.00014 Score=65.48 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=31.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
|+|+|+||+|++|..+++.|++.|++|++++|..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4799999999999999999999999999998854
No 362
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=97.19 E-value=0.00021 Score=73.65 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=59.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
++++++||||| |++|+.++..|++.|++|++++|..... .+..+.+ +..+ + ++.|
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a----------------~~la~~~----~~~~--~--~~~d 416 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERA----------------LELAEAI----GGKA--L--SLTD 416 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHH----------------HHHHHHT----TC-C--E--ETTT
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH----------------HHHHHHc----CCce--e--eHHH
Confidence 46789999999 7999999999999999999988754311 0111111 1111 1 1212
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCc------ccccccccccchhhhhhHHHH-HHHHHHHHHcC
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSA------PYSMIDRSRAVFTQHNNVIGT-LNVLFAMKEFR 220 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~------~~~~~~~~~~~~~~~~Nv~g~-~~ll~~a~~~g 220 (479)
+++ +....+|+||||+|.... +.......++..++++|+.+. -.+++.+++.|
T Consensus 417 ---l~~-~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G 476 (523)
T 2o7s_A 417 ---LDN-YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESG 476 (523)
T ss_dssp ---TTT-C--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTT
T ss_pred ---hhh-ccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCC
Confidence 111 011148999999986321 111122334566788888653 24566666555
No 363
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.16 E-value=0.0057 Score=58.57 Aligned_cols=117 Identities=15% Similarity=0.111 Sum_probs=74.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEE-Eccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELY-IGDI 161 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~Dl 161 (479)
..++|.|+|+ |.+|..++..|+..|. +|+++|.......... .++.+. .... ...... ..|+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a---------~DL~~~----~~~~-~~~~i~~t~d~ 84 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEM---------MDLEHG----SLFL-HTAKIVSGKDY 84 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHH---------HHHHHH----GGGS-CCSEEEEESSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHH---------HHhhhh----hhcc-cCCeEEEcCCH
Confidence 3678999999 9999999999999986 8999998543211100 001111 0111 111222 2343
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
.+ ++ +.|+||-+||....+...+ ...+..|+.-.+.+.+.+.+.+....++.+|-
T Consensus 85 ~~-------~~--daDiVIitaG~p~kpG~tR-----~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 85 SV-------SA--GSKLVVITAGARQQEGESR-----LNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp CS-------CS--SCSEEEECCSCCCCSSCCT-----TGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred HH-------hC--CCCEEEEeCCCCCCCCCCH-----HHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 22 45 8999999999754322222 23567899999999999998887756776663
No 364
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.16 E-value=0.004 Score=57.50 Aligned_cols=125 Identities=18% Similarity=0.188 Sum_probs=71.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCC----CCCCccchhhhhhhhhcccC-CCceeEE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGL----DSLTPIASIHDRLRCWKSLT-GKNIELY 157 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~v~~v 157 (479)
+++++|+|.|+ |.+|.++++.|++.|. +++++|...-...+..... ..+. ........+.+..+. .-.++.+
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG-~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDID-RPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTT-SBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCC-CHHHHHHHHHHHHHCCCCEEEEE
Confidence 35679999998 8899999999999996 7788876431111110000 0000 011111222222222 1245555
Q ss_pred EcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecccccc
Q 011706 158 IGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYG 235 (479)
Q Consensus 158 ~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g 235 (479)
..+++ .+.+.++++ ++|+||.+.. |...-..+.++|.+.+ +.+|+.+..+.+|
T Consensus 104 ~~~~~-~~~~~~~~~--~~DvVi~~~d--------------------~~~~r~~l~~~~~~~~--~p~i~~~~~g~~G 156 (251)
T 1zud_1 104 QQRLT-GEALKDAVA--RADVVLDCTD--------------------NMATRQEINAACVALN--TPLITASAVGFGG 156 (251)
T ss_dssp CSCCC-HHHHHHHHH--HCSEEEECCS--------------------SHHHHHHHHHHHHHTT--CCEEEEEEEBTEE
T ss_pred eccCC-HHHHHHHHh--cCCEEEECCC--------------------CHHHHHHHHHHHHHhC--CCEEEEeccccce
Confidence 55554 356777787 6899998742 3333345667777776 3688877655444
No 365
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.15 E-value=0.0025 Score=60.80 Aligned_cols=116 Identities=14% Similarity=0.008 Sum_probs=73.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-C--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK-G--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~-G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
|+|.|+||+|.+|..++..|..+ + .+++++|.... .. ....++.+.. ........ .+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~-~~----------------G~a~Dl~~~~-~~~~v~~~-~~- 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TP----------------GVAVDLSHIP-TAVKIKGF-SG- 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT-HH----------------HHHHHHHTSC-SSEEEEEE-CS-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC-ch----------------hHHHHhhCCC-CCceEEEe-cC-
Confidence 58999999999999999999875 5 58899887541 10 1111222211 11222110 01
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
+...+.++ +.|+||.+||...-+...+ ...++.|..-.+.+.+.+.+.+.+..++.+|-
T Consensus 61 -~~~~~~~~--~aDivii~ag~~rkpG~~R-----~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN 119 (312)
T 3hhp_A 61 -EDATPALE--GADVVLISAGVARKPGMDR-----SDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (312)
T ss_dssp -SCCHHHHT--TCSEEEECCSCSCCTTCCH-----HHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred -CCcHHHhC--CCCEEEEeCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 11244566 8999999999643222211 33578899999999999998887756776653
No 366
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=97.14 E-value=0.00049 Score=66.92 Aligned_cols=37 Identities=14% Similarity=0.052 Sum_probs=33.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~ 190 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK 190 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3588999999999999999999999999999988753
No 367
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.10 E-value=0.00076 Score=65.29 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=33.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 184 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA 184 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3588999999999999999999999999999998754
No 368
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=97.09 E-value=0.00066 Score=66.32 Aligned_cols=37 Identities=16% Similarity=0.022 Sum_probs=33.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~ 197 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ 197 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3578999999999999999999999999999998753
No 369
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.09 E-value=0.00084 Score=62.93 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=33.1
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+++++++|+|+ |.+|+.++..|++.|++|++++|..
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH
Confidence 356899999998 8899999999999999999998754
No 370
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.08 E-value=0.0048 Score=59.56 Aligned_cols=175 Identities=10% Similarity=0.071 Sum_probs=101.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCc-eeE
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-------EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKN-IEL 156 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-------~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~ 156 (479)
..-+|.|+||+|.||..|+-.|+.... ++..+|....-. .+.....++....... ...
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~--------------~~~Gva~DL~~~~~~~~~~~ 88 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALK--------------ALAGVEAELEDCAFPLLDKV 88 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH--------------HHHHHHHHHHHTTCTTEEEE
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccc--------------cchhhhhhhhhcCccCCCcE
Confidence 456999999999999999998887532 678888643210 0011111222222121 222
Q ss_pred EEcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcC-CcceEEEeecc---c
Q 011706 157 YIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFR-QECHLVKLGTM---G 232 (479)
Q Consensus 157 v~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g-~~~~~V~~SS~---~ 232 (479)
+.++ ...++++ +.|+||-+||...-+...+ ...++.|..-.+.+.+...+.. ....++.+|-- .
T Consensus 89 ~~~~-----~~~~a~~--~advVvi~aG~prkpGmtR-----~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~ 156 (345)
T 4h7p_A 89 VVTA-----DPRVAFD--GVAIAIMCGAFPRKAGMER-----KDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTN 156 (345)
T ss_dssp EEES-----CHHHHTT--TCSEEEECCCCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH
T ss_pred EEcC-----ChHHHhC--CCCEEEECCCCCCCCCCCH-----HHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchH
Confidence 2221 2456777 8999999999754332222 2467899999999999988864 44355555531 1
Q ss_pred cccCCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCCC
Q 011706 233 EYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 302 (479)
Q Consensus 233 v~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~~ 302 (479)
+|-. .+. .+--..+....+.+-+-.-++-...+++.|++..-++-..|.|...
T Consensus 157 ~~i~-----~~~------------~~g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG 209 (345)
T 4h7p_A 157 ALIL-----LKS------------AQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHS 209 (345)
T ss_dssp HHHH-----HHH------------TTTCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSS
T ss_pred HHHH-----HHH------------ccCCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCC
Confidence 1100 000 0001122344555666666666667777788777776556777643
No 371
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.08 E-value=0.0034 Score=59.19 Aligned_cols=114 Identities=16% Similarity=0.096 Sum_probs=74.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcc---cCCCceeEEEccc
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS---LTGKNIELYIGDI 161 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~Dl 161 (479)
|+|.|+|| |+||..++..|+.++. ++.++|........ ...++.+ ...........+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G----------------~a~DL~h~~~~~~~~~~i~~~~- 62 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG----------------EAMDLAHAAAGIDKYPKIVGGA- 62 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHH----------------HHHHHHHHHGGGTCCCEEEEES-
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchh----------------hhhhhhcccccCCCCCeEecCC-
Confidence 57999996 9999999999988873 79999875431111 1111211 111122222221
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
|.+ .++ +.|+||-.||...-+...+ ...++.|..-.+.+.+.+.+.+.+..++.+|-
T Consensus 63 -d~~----~~~--~aDvVvitAG~prkpGmtR-----~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 63 -DYS----LLK--GSEIIVVTAGLARKPGMTR-----LDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp -CGG----GGT--TCSEEEECCCCCCCSSSCH-----HHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred -CHH----HhC--CCCEEEEecCCCCCCCCch-----HHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 222 355 8999999999754333222 34678999999999999999988756666664
No 372
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.07 E-value=0.00095 Score=63.15 Aligned_cols=117 Identities=17% Similarity=0.102 Sum_probs=74.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
|+|.|+|+ |.+|..++..|+..|+ +|+++|+........ ..+ +............+... +|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~------------~~d-l~~~~~~~~~~~~i~~t--~d- 63 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGE------------AMD-LAHAAAGIDKYPKIVGG--AD- 63 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHH------------HHH-HHHHHHTTTCCCEEEEE--SC-
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHH------------HHH-HHhhhhhcCCCCEEEEe--CC-
Confidence 58999999 9999999999999987 899999865321100 000 01111001112222221 12
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
.++++ +.|+||.+||....+...+ ...+..|..-.+.+.+.+.+.+.+..|+.+|-
T Consensus 64 ---~~a~~--~aDiVViaag~~~kpG~~R-----~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 64 ---YSLLK--GSEIIVVTAGLARKPGMTR-----LDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp ---GGGGT--TCSEEEECCCCCCCSSCCH-----HHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred ---HHHhC--CCCEEEECCCCCCCCCCcH-----HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 34566 8999999998643222111 23567899999999999999887767777664
No 373
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.06 E-value=0.0035 Score=59.83 Aligned_cols=112 Identities=15% Similarity=0.125 Sum_probs=67.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhccc---CCCceeEEE-ccc
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL---TGKNIELYI-GDI 161 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~-~Dl 161 (479)
++|.|+|| |++|..++..|+..|+ +|+++|+....... ...++.+. ......+.. .|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g----------------~~~dl~~~~~~~~~~~~i~~t~d- 64 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQG----------------KALDLYEASPIEGFDVRVTGTNN- 64 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHH----------------HHHHHHTTHHHHTCCCCEEEESC-
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHH----------------HHHhHHHhHhhcCCCeEEEECCC-
Confidence 68999999 9999999999999996 98888875421110 01111110 011222222 33
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
. +.++ +.|+||.++|....+.... ......|+...+.+.+.+.+.+.+ .+|.+.|
T Consensus 65 -----~-~a~~--~aD~Vi~a~g~p~~~g~~r-----~dl~~~n~~i~~~i~~~i~~~~p~-a~vi~~t 119 (309)
T 1ur5_A 65 -----Y-ADTA--NSDVIVVTSGAPRKPGMSR-----EDLIKVNADITRACISQAAPLSPN-AVIIMVN 119 (309)
T ss_dssp -----G-GGGT--TCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHGGGCTT-CEEEECC
T ss_pred -----H-HHHC--CCCEEEEcCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHhhCCC-eEEEEcC
Confidence 2 3456 8999999998643221111 124567888888999999888766 4444444
No 374
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.02 E-value=0.011 Score=56.89 Aligned_cols=123 Identities=11% Similarity=0.044 Sum_probs=71.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
+.++|.|+|| |.+|..++..|+..|+ +|+++|+........ ...+.+..... ....++.. .
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~---------~~~l~~~~~~~--~~~~~i~~-t----- 69 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGK---------ALDLSHVTSVV--DTNVSVRA-E----- 69 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH---------HHHHHHHHHHT--TCCCCEEE-E-----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHH---------HHHHHhhhhcc--CCCCEEEE-e-----
Confidence 3578999998 9999999999999998 999998864311110 00011111100 01112221 1
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEe
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKL 228 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~ 228 (479)
.+++++++ +.|+||-++|..........-..-......|+.-.+.+.+.+.+...+..++.+
T Consensus 70 -~d~~ea~~--~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~ 131 (331)
T 1pzg_A 70 -YSYEAALT--GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV 131 (331)
T ss_dssp -CSHHHHHT--TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -CCHHHHhC--CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence 22455677 899999999854321110000001223567888888999888887766455544
No 375
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.02 E-value=0.0015 Score=63.88 Aligned_cols=37 Identities=19% Similarity=0.072 Sum_probs=33.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||..+++.+...|++|+++++..
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~ 198 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD 198 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3578999999999999999999999999999988753
No 376
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.02 E-value=0.001 Score=64.35 Aligned_cols=70 Identities=14% Similarity=0.086 Sum_probs=55.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
.++++|.|+ |.+|..+++.|.++|+ |+++|+... +.+ +. ..++.++.||.+|++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~--------------------~~~-~~---~~~~~~i~gd~~~~~ 168 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENV--------------------RKK-VL---RSGANFVHGDPTRVS 168 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGG--------------------HHH-HH---HTTCEEEESCTTSHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChh--------------------hhh-HH---hCCcEEEEeCCCCHH
Confidence 458999997 9999999999999999 999886543 111 11 147889999999999
Q ss_pred HHHHH-hhhcCCCEEEEcc
Q 011706 166 FLSES-FKSFEPDAVVHFG 183 (479)
Q Consensus 166 ~~~~~-~~~~~~D~Vih~A 183 (479)
.++++ ++ +.|.||-+.
T Consensus 169 ~L~~a~i~--~a~~vi~~~ 185 (336)
T 1lnq_A 169 DLEKANVR--GARAVIVDL 185 (336)
T ss_dssp HHHHTCST--TEEEEEECC
T ss_pred HHHhcChh--hccEEEEcC
Confidence 99887 55 788888664
No 377
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.00 E-value=0.0033 Score=60.28 Aligned_cols=113 Identities=17% Similarity=0.232 Sum_probs=69.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccC--CCceeEEEccc
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLT--GKNIELYIGDI 161 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl 161 (479)
.++|.|+|+ |++|..++..|+..|. +|+++|........ ....+.+.. ...+.+. .
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g----------------~~~dl~~~~~~~~~~~i~-~-- 66 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIG----------------EAMDINHGLPFMGQMSLY-A-- 66 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCH----------------HHHHHTTSCCCTTCEEEC----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHH----------------HHHHHHHhHHhcCCeEEE-E--
Confidence 468999998 9999999999999987 89999975421110 011111110 1123222 1
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
.+ .++++ +.|+||.+++...-+.... ...+..|+.....+.+.+.+.+.+..++.+|
T Consensus 67 ~~----~~a~~--~aDvVii~~g~p~k~g~~r-----~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (318)
T 1y6j_A 67 GD----YSDVK--DCDVIVVTAGANRKPGETR-----LDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 123 (318)
T ss_dssp -C----GGGGT--TCSEEEECCCC------CH-----HHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred CC----HHHhC--CCCEEEEcCCCCCCCCcCH-----HHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 12 23466 8999999998633111111 2346789999999999999887765566543
No 378
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.97 E-value=0.0012 Score=64.14 Aligned_cols=36 Identities=11% Similarity=0.004 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+++|||+||+|.+|..+++.+...|++|+++++..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~ 201 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE 201 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 578999999999999999999999999999998753
No 379
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=96.97 E-value=0.00093 Score=57.04 Aligned_cols=76 Identities=17% Similarity=-0.010 Sum_probs=50.3
Q ss_pred chhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh--HHHHHHhhh
Q 011706 96 GYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF--EFLSESFKS 173 (479)
Q Consensus 96 G~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~--~~~~~~~~~ 173 (479)
|.++..+++.|++.|++|++.++....... .++..+... ..+.....+.+|++++ ++++++++.
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~-------------~~~~~~~~~-~~G~~~~~i~~Dv~~~~~~~v~~~~~~ 91 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDA-------------HPDEGKLVT-QAGMDYVYIPVDWQNPKVEDVEAFFAA 91 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTS-------------CTTHHHHHH-HTTCEEEECCCCTTSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccc-------------cccHHHHHH-HcCCeEEEecCCCCCCCHHHHHHHHHH
Confidence 679999999999999999887664321100 000111111 1245677788999999 888776653
Q ss_pred ----cCCCEEEEcccc
Q 011706 174 ----FEPDAVVHFGEQ 185 (479)
Q Consensus 174 ----~~~D~Vih~A~~ 185 (479)
.+-|++|||||.
T Consensus 92 i~~~~G~dVLVnnAgg 107 (157)
T 3gxh_A 92 MDQHKGKDVLVHCLAN 107 (157)
T ss_dssp HHHTTTSCEEEECSBS
T ss_pred HHhcCCCCEEEECCCC
Confidence 234999999985
No 380
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=96.94 E-value=0.0019 Score=61.16 Aligned_cols=35 Identities=29% Similarity=0.490 Sum_probs=30.2
Q ss_pred CCcE-EEEE-cCC-----------------chhhHHHHHHHHhCCCeEEEEecc
Q 011706 85 KAKR-VMII-GGD-----------------GYCGWATALHLSNKGYEVAIVDSL 119 (479)
Q Consensus 85 ~~~~-vLVt-Gat-----------------G~iG~~l~~~Ll~~G~~V~~~dr~ 119 (479)
.|++ |||| |+| |-.|.++++.++++|++|+.+.+.
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 4666 8888 566 889999999999999999998764
No 381
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.93 E-value=0.0035 Score=59.78 Aligned_cols=114 Identities=15% Similarity=0.079 Sum_probs=71.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcc---cCCCceeEEEccc
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS---LTGKNIELYIGDI 161 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~Dl 161 (479)
|+|.|+|+ |.+|..++..|+..|. +|+++|+....... ...++.+ .......+...|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g----------------~a~DL~~~~~~~~~~~~v~~~~- 62 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQG----------------KALDMRESSPIHGFDTRVTGTN- 62 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHH----------------HHHHHHHHHHHHTCCCEEEEES-
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHH----------------HHHHHhccccccCCCcEEEECC-
Confidence 58999997 9999999999999886 89999985431111 0111111 111223332222
Q ss_pred CChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
+ .+.++ +.|+||.+||....+...+ ...+..|+.-.+.+.+.+.+.+.+..++.+|-
T Consensus 63 -~----~~a~~--~aDvVii~ag~~~kpG~~R-----~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 63 -D----YGPTE--DSDVCIITAGLPRSPGMSR-----DDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp -S----SGGGT--TCSEEEECCCC-------C-----HHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred -C----HHHhC--CCCEEEECCCCCCCCCCCH-----HHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 2 23455 8999999998643222111 23568899999999999999887766776663
No 382
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.89 E-value=0.00067 Score=63.56 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC-CCeEEE-Eec
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNK-GYEVAI-VDS 118 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~-~dr 118 (479)
++++|.|+|++|.+|+.+++.+++. |+++++ +|+
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 4579999999999999999998855 788774 454
No 383
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.88 E-value=0.0019 Score=61.34 Aligned_cols=77 Identities=10% Similarity=0.145 Sum_probs=51.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.+.+++|+|+|+ |.+|+.++..|++.|. +|++++|.... ++.+.+..+.... ++
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k--------------------a~~la~~~~~~~~----~~ 192 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK--------------------AERLVREGDERRS----AY 192 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH--------------------HHHHHHHSCSSSC----CE
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH--------------------HHHHHHHhhhccC----ce
Confidence 356899999998 8899999999999998 89998875431 1111111111100 12
Q ss_pred CChHHHHHHhhhcCCCEEEEccccc
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQR 186 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~~ 186 (479)
.+.+++.+.+. ++|+||++.+..
T Consensus 193 ~~~~~~~~~~~--~aDivIn~t~~~ 215 (297)
T 2egg_A 193 FSLAEAETRLA--EYDIIINTTSVG 215 (297)
T ss_dssp ECHHHHHHTGG--GCSEEEECSCTT
T ss_pred eeHHHHHhhhc--cCCEEEECCCCC
Confidence 23345666676 799999998753
No 384
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.86 E-value=0.0078 Score=58.30 Aligned_cols=126 Identities=17% Similarity=0.058 Sum_probs=75.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccC----CCCCCccchhhhhhhhhcccC-CCceeEE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLG----LDSLTPIASIHDRLRCWKSLT-GKNIELY 157 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~v~~v 157 (479)
++..+|+|.|+ |++|..+++.|++.|. +++++|...=...+.... ...+. ........+.+.++. .-.+..+
T Consensus 34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG-~~Ka~~~~~~l~~lnp~v~v~~~ 111 (346)
T 1y8q_A 34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVG-RNRAEASLERAQNLNPMVDVKVD 111 (346)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTT-SBHHHHHHHHHHHTCTTSEEEEE
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCc-CCHHHHHHHHHHhHCCCeEEEEE
Confidence 34679999997 9999999999999997 788887532111110000 00010 111222223333332 2246666
Q ss_pred EcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccCC
Q 011706 158 IGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTP 237 (479)
Q Consensus 158 ~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~~ 237 (479)
..++.+ ...+.++ ++|+||.+.. |...-..+.++|.+.+ ..||..++.+.+|.-
T Consensus 112 ~~~~~~--~~~~~~~--~~dvVv~~~d--------------------~~~~r~~ln~~~~~~~--ip~i~~~~~G~~G~v 165 (346)
T 1y8q_A 112 TEDIEK--KPESFFT--QFDAVCLTCC--------------------SRDVIVKVDQICHKNS--IKFFTGDVFGYHGYT 165 (346)
T ss_dssp CSCGGG--CCHHHHT--TCSEEEEESC--------------------CHHHHHHHHHHHHHTT--CEEEEEEEEBTEEEE
T ss_pred ecccCc--chHHHhc--CCCEEEEcCC--------------------CHHHHHHHHHHHHHcC--CCEEEEeecccEEEE
Confidence 666643 2355666 7899997642 3444456778888887 468888887777754
No 385
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.82 E-value=0.0083 Score=57.44 Aligned_cols=117 Identities=16% Similarity=0.187 Sum_probs=72.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
+.++|.|+|| |.+|..++..|+..| .+|.++|........ ...+ +.......+..+.+.. |
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g------------~~~d-l~~~~~~~~~~~~v~~-~-- 67 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRG------------DVMD-LKHATPYSPTTVRVKA-G-- 67 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHH------------HHHH-HHHHGGGSSSCCEEEE-C--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhh------------hhhh-HHhhhhhcCCCeEEEe-C--
Confidence 4579999999 999999999999888 489999875321110 0000 0111112112333332 2
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ .++++ +.|+||.+++....+.... ...+..|+.-...+.+.+.+.+.+..++.+|
T Consensus 68 ~----~~a~~--~aDvVvi~ag~~~~~g~~r-----~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 68 E----YSDCH--DADLVVICAGAAQKPGETR-----LDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp C----GGGGT--TCSEEEECCCCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred C----HHHhC--CCCEEEECCCCCCCCCCcH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 2 33466 8999999998643222111 2345778888899999998887775666644
No 386
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.82 E-value=0.00042 Score=65.62 Aligned_cols=36 Identities=25% Similarity=0.434 Sum_probs=31.9
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+++|+++|||+ |.+|+.++..|++.| +|++++|..
T Consensus 125 ~l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 125 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCH
Confidence 356899999998 599999999999999 999988754
No 387
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.81 E-value=0.00064 Score=57.04 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=30.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
+++|+|+|+ |.+|..+++.|.+.|++|++++|..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 789999996 9999999999999999988888754
No 388
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.81 E-value=0.0016 Score=63.28 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=33.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||...++.+...|++|+++++..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~ 194 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT 194 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3588999999999999999999999999999998754
No 389
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=96.81 E-value=0.01 Score=61.78 Aligned_cols=126 Identities=17% Similarity=0.165 Sum_probs=75.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccC----CCCCCccchhhhhhhhhcccC-CCceeEEE
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLG----LDSLTPIASIHDRLRCWKSLT-GKNIELYI 158 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~ 158 (479)
...+|||.|+ |++|..+++.|++.|. +++++|...=...+.... ...+. ........+.+..+. .-.++.+.
T Consensus 16 ~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVG-k~KAeaaa~~L~~iNP~v~V~a~~ 93 (640)
T 1y8q_B 16 AGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVG-RSKAQVAKESVLQFYPKANIVAYH 93 (640)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTT-SBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcC-hHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4579999998 9999999999999996 788887643111111000 00011 011111222333332 23667777
Q ss_pred cccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccC
Q 011706 159 GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~ 236 (479)
.++++.....+.+. ++|+||.+.. |+..-..+.++|.+.++ .+|+.++.+.+|.
T Consensus 94 ~~i~~~~~~~~~~~--~~DlVvda~D--------------------n~~aR~~ln~~c~~~~i--PlI~~g~~G~~G~ 147 (640)
T 1y8q_B 94 DSIMNPDYNVEFFR--QFILVMNALD--------------------NRAARNHVNRMCLAADV--PLIESGTAGYLGQ 147 (640)
T ss_dssp SCTTSTTSCHHHHT--TCSEEEECCS--------------------CHHHHHHHHHHHHHHTC--CEEEEEEETTEEE
T ss_pred cccchhhhhHhhhc--CCCEEEECCC--------------------CHHHHHHHHHHHHHcCC--CEEEEEEecccce
Confidence 88765432345666 7999998742 45555567788888873 5777776655443
No 390
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=96.80 E-value=0.0028 Score=61.63 Aligned_cols=35 Identities=9% Similarity=0.005 Sum_probs=31.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
+++|||+||+|.||...++.+...|++|+++++..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~ 199 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRD 199 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 37999999999999999999988999999998654
No 391
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.80 E-value=0.0081 Score=57.48 Aligned_cols=115 Identities=17% Similarity=0.194 Sum_probs=70.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.++|.|+|| |.+|..++..|+..+. +|+++|+........ . ..+....... ..+.+.. | +
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~------------~-~dl~~~~~~~-~~~~v~~-~--~ 66 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGD------------A-LDLEDAQAFT-APKKIYS-G--E 66 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHH------------H-HHHHGGGGGS-CCCEEEE-C--C
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHH------------H-HHHHHHHHhc-CCeEEEE-C--C
Confidence 368999999 9999999999998875 899999854211110 0 0011111111 2333332 2 2
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
.++++ +.|+||..++...-+.... ...+..|+.....+.+.+.+.+....++.+|
T Consensus 67 ----~~a~~--~aDvVii~ag~~~~~g~~R-----~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 67 ----YSDCK--DADLVVITAGAPQKPGESR-----LDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp ----GGGGT--TCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred ----HHHhC--CCCEEEECCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 23466 8999999998643222111 1245779999999999999988776777664
No 392
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.79 E-value=0.0024 Score=61.82 Aligned_cols=35 Identities=26% Similarity=0.164 Sum_probs=31.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+++|||+|| |.+|..+++.+...|++|+++++..
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~ 198 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD 198 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 5789999999 7799999999999999999988753
No 393
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.79 E-value=0.0093 Score=56.73 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=66.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccC--CCceeEEEcccC
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLT--GKNIELYIGDIC 162 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~ 162 (479)
|+|.|+|| |.+|..++..|+..|+ +|+++|+....... ....+.+.. .....+...
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~----------------~~~~l~~~~~~~~~~~i~~~--- 60 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQA----------------EAEDIAHAAPVSHGTRVWHG--- 60 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHH----------------HHHHHTTSCCTTSCCEEEEE---
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHH----------------HHHhhhhhhhhcCCeEEEEC---
Confidence 57999998 9999999999999998 99999986431110 011111100 012222222
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+. +.++ +.|+||.+++....+.... ...+..|+...+.+++.+.+.+.+..++.+|
T Consensus 61 ~~----~a~~--~aDvVIi~~~~~~~~g~~r-----~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 61 GH----SELA--DAQVVILTAGANQKPGESR-----LDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp CG----GGGT--TCSEEEECC-----------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred CH----HHhC--CCCEEEEcCCCCCCCCCcH-----HHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 22 2456 8999999997533221111 1245679999999999888876664555544
No 394
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.78 E-value=0.0088 Score=58.12 Aligned_cols=121 Identities=17% Similarity=0.088 Sum_probs=71.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccC----CCCCCccchhhhhhhhhcccC-CCceeEE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLG----LDSLTPIASIHDRLRCWKSLT-GKNIELY 157 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~v~~v 157 (479)
+++++|+|.|+ |.+|..+++.|++.|. +++++|...-...+.... ...+. ........+.+..+. .-.++.+
T Consensus 116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG-~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVG-KNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTT-SBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCC-ChHHHHHHHHHHHHCCCCeEEEe
Confidence 45789999998 9999999999999996 788888643211111100 00000 011111222233322 2356777
Q ss_pred EcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHH-HHHHHHHHHHHcCCcceEEEeecc
Q 011706 158 IGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVI-GTLNVLFAMKEFRQECHLVKLGTM 231 (479)
Q Consensus 158 ~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~-g~~~ll~~a~~~g~~~~~V~~SS~ 231 (479)
..++++...+.+ ++ ++|+||.+.. |.. .-..+.++|.+.++ .+|+.+..
T Consensus 194 ~~~i~~~~~~~~-~~--~~DlVvd~~D--------------------n~~~~r~~ln~~c~~~~~--p~i~~~~~ 243 (353)
T 3h5n_A 194 ALNINDYTDLHK-VP--EADIWVVSAD--------------------HPFNLINWVNKYCVRANQ--PYINAGYV 243 (353)
T ss_dssp ECCCCSGGGGGG-SC--CCSEEEECCC--------------------CSTTHHHHHHHHHHHTTC--CEEEEEEE
T ss_pred ecccCchhhhhH-hc--cCCEEEEecC--------------------ChHHHHHHHHHHHHHhCC--CEEEEEEe
Confidence 777776654555 66 7999998752 222 22345578888873 57776553
No 395
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.77 E-value=0.0025 Score=62.36 Aligned_cols=76 Identities=26% Similarity=0.332 Sum_probs=52.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.++++|+|+|+ |.+|..+++.|...|.+|+++|+.... ++.........+.. +..+
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r--------------------~~~~~~~~~~~~~~---~~~~ 220 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVER--------------------LSYLETLFGSRVEL---LYSN 220 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHHHGGGSEE---EECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHH--------------------HHHHHHhhCceeEe---eeCC
Confidence 45689999999 999999999999999999999986431 11111111112212 2234
Q ss_pred hHHHHHHhhhcCCCEEEEcccc
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~ 185 (479)
.+.+.+.+. ++|+||++++.
T Consensus 221 ~~~~~~~~~--~~DvVI~~~~~ 240 (361)
T 1pjc_A 221 SAEIETAVA--EADLLIGAVLV 240 (361)
T ss_dssp HHHHHHHHH--TCSEEEECCCC
T ss_pred HHHHHHHHc--CCCEEEECCCc
Confidence 556777777 79999999875
No 396
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.77 E-value=0.0015 Score=62.99 Aligned_cols=37 Identities=11% Similarity=0.010 Sum_probs=33.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||...++.+...|++|+++++..
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 175 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSP 175 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3588999999999999999999998999999998753
No 397
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.75 E-value=0.0082 Score=57.64 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=71.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhccc--CCCceeEEEcc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL--TGKNIELYIGD 160 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D 160 (479)
+.++|.|+|| |.+|..++..|+..+. +|+++|+....... ...++.+. ....+.+.. |
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g----------------~~~dl~~~~~~~~~~~i~~-~ 69 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKG----------------DAIDLSNALPFTSPKKIYS-A 69 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHH----------------HHHHHHTTGGGSCCCEEEE-C
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHH----------------HHHHHHHHHHhcCCeEEEE-C
Confidence 3578999999 9999999999988875 89999875421111 01111111 012333332 2
Q ss_pred cCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 161 ICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 161 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ .++++ +.|+||..++...-+.... ...+..|+.-...+.+.+.+.+....++.+|
T Consensus 70 --~----~~a~~--~aDvVii~ag~~~k~g~~R-----~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 70 --E----YSDAK--DADLVVITAGAPQKPGETR-----LDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp --C----GGGGG--GCSEEEECCCCC-----CH-----HHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred --C----HHHhC--CCCEEEEcCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 2 23466 8999999998643222111 2346779999999999998888776777664
No 398
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.75 E-value=0.0015 Score=64.01 Aligned_cols=74 Identities=14% Similarity=0.090 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhc-ccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK-SLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d 163 (479)
.+.+|||+|+ |.||...++.+...|++|+++++.... .+... .+ +... ..|..+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--------------------~~~~~~~l---Ga~~-v~~~~~ 241 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSK--------------------KEEALKNF---GADS-FLVSRD 241 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG--------------------HHHHHHTS---CCSE-EEETTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH--------------------HHHHHHhc---CCce-EEeccC
Confidence 5789999996 999999999999999999998875431 11111 11 1211 246666
Q ss_pred hHHHHHHhhhcCCCEEEEcccc
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~ 185 (479)
.+.+.++.. ++|+||+++|.
T Consensus 242 ~~~~~~~~~--~~D~vid~~g~ 261 (366)
T 1yqd_A 242 QEQMQAAAG--TLDGIIDTVSA 261 (366)
T ss_dssp HHHHHHTTT--CEEEEEECCSS
T ss_pred HHHHHHhhC--CCCEEEECCCc
Confidence 666666654 79999999874
No 399
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.74 E-value=0.0061 Score=59.57 Aligned_cols=78 Identities=21% Similarity=0.171 Sum_probs=50.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYE-VAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~-V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.+.+|||+|+ |.+|...++.+...|.+ |+++++... +.+...++ ...+..+..|-.+
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~--------------------~~~~a~~l-~~~~~~~~~~~~~ 236 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEG--------------------RLKFAKEI-CPEVVTHKVERLS 236 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHH--------------------HHHHHHHH-CTTCEEEECCSCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH--------------------HHHHHHHh-chhcccccccccc
Confidence 4789999998 99999999988888997 888876432 22222223 2333333444334
Q ss_pred hHHHHHHh----hhcCCCEEEEccc
Q 011706 164 FEFLSESF----KSFEPDAVVHFGE 184 (479)
Q Consensus 164 ~~~~~~~~----~~~~~D~Vih~A~ 184 (479)
.+++.+.+ ...++|+||+++|
T Consensus 237 ~~~~~~~v~~~t~g~g~Dvvid~~g 261 (363)
T 3m6i_A 237 AEESAKKIVESFGGIEPAVALECTG 261 (363)
T ss_dssp HHHHHHHHHHHTSSCCCSEEEECSC
T ss_pred hHHHHHHHHHHhCCCCCCEEEECCC
Confidence 44443333 2237999999987
No 400
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.72 E-value=0.0031 Score=61.98 Aligned_cols=76 Identities=22% Similarity=0.219 Sum_probs=54.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
..+++|+|+|+ |.||..+++.|...|.+|+++|+.... ++......+..+ ..+..+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~--------------------l~~~~~~~g~~~---~~~~~~ 221 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDK--------------------LRQLDAEFCGRI---HTRYSS 221 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH--------------------HHHHHHHTTTSS---EEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHH--------------------HHHHHHhcCCee---EeccCC
Confidence 56899999998 999999999999999999999985431 111111111222 223445
Q ss_pred hHHHHHHhhhcCCCEEEEcccc
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~ 185 (479)
.+.+.+++. ++|+||.+++.
T Consensus 222 ~~~l~~~l~--~aDvVi~~~~~ 241 (377)
T 2vhw_A 222 AYELEGAVK--RADLVIGAVLV 241 (377)
T ss_dssp HHHHHHHHH--HCSEEEECCCC
T ss_pred HHHHHHHHc--CCCEEEECCCc
Confidence 667778887 78999998874
No 401
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.72 E-value=0.0036 Score=63.12 Aligned_cols=36 Identities=25% Similarity=0.179 Sum_probs=32.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSL 119 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~ 119 (479)
..+++|||+||+|.||...++.+...|.+|+++++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~ 254 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS 254 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 468899999999999999999999999999988864
No 402
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.72 E-value=0.0042 Score=57.92 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEE-ecc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNK-GYEVAIV-DSL 119 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~-dr~ 119 (479)
+++++|.|+||+|.+|+.+++.+.+. +++++++ |+.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~ 42 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRT 42 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEec
Confidence 34689999999999999999999876 6777764 543
No 403
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.71 E-value=0.00067 Score=63.91 Aligned_cols=38 Identities=26% Similarity=0.342 Sum_probs=33.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIR 121 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~ 121 (479)
..+++++||+|+ |++|+.++..|++.|. +|++++|...
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~ 162 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTS 162 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHH
Confidence 457899999998 9999999999999998 7999887543
No 404
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.70 E-value=0.0031 Score=61.28 Aligned_cols=36 Identities=25% Similarity=0.269 Sum_probs=32.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+.+|||+||+|.+|...++.+...|++|+++++..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~ 185 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRN 185 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578999999999999999999999999999988743
No 405
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.69 E-value=0.0053 Score=62.00 Aligned_cols=73 Identities=25% Similarity=0.345 Sum_probs=57.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
.|+|+|.|+ |-+|.+|++.|.++|++|+++|.... +++.+... .++..+.||-++++
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~--------------------~~~~~~~~--~~~~~i~Gd~~~~~ 59 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGD--------------------RLRELQDK--YDLRVVNGHASHPD 59 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHH--------------------HHHHHHHH--SSCEEEESCTTCHH
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHH--------------------HHHHHHHh--cCcEEEEEcCCCHH
Confidence 588999998 99999999999999999999997543 22222211 25788999999999
Q ss_pred HHHHHhhhcCCCEEEEc
Q 011706 166 FLSESFKSFEPDAVVHF 182 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~ 182 (479)
.++++=-+ ..|.+|-+
T Consensus 60 ~L~~Agi~-~ad~~ia~ 75 (461)
T 4g65_A 60 VLHEAGAQ-DADMLVAV 75 (461)
T ss_dssp HHHHHTTT-TCSEEEEC
T ss_pred HHHhcCCC-cCCEEEEE
Confidence 99887432 68998844
No 406
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.66 E-value=0.002 Score=62.45 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=33.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||...++.+...|++|+++++..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 179 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN 179 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3588999999999999999998888899999998754
No 407
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.65 E-value=0.0059 Score=58.13 Aligned_cols=85 Identities=13% Similarity=0.149 Sum_probs=53.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
..+++++||+|+ |++|+.++..|++.|. +|+++.|...... ...+..+.+.... +......++
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~-------------~a~~la~~~~~~~--~~~v~~~~~ 208 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFE-------------KAVAFAKRVNENT--DCVVTVTDL 208 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHH-------------HHHHHHHHHHHHS--SCEEEEEET
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHH-------------HHHHHHHHhhhcc--CcceEEech
Confidence 457899999997 9999999999999998 8999888622100 0011111121111 222333455
Q ss_pred CChHHHHHHhhhcCCCEEEEcccc
Q 011706 162 CDFEFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 162 ~d~~~~~~~~~~~~~D~Vih~A~~ 185 (479)
.+.+.+.+.+. .+|+|||+...
T Consensus 209 ~~l~~~~~~l~--~~DiIINaTp~ 230 (312)
T 3t4e_A 209 ADQHAFTEALA--SADILTNGTKV 230 (312)
T ss_dssp TCHHHHHHHHH--HCSEEEECSST
T ss_pred HhhhhhHhhcc--CceEEEECCcC
Confidence 55444556666 68999998643
No 408
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.65 E-value=0.011 Score=56.61 Aligned_cols=35 Identities=26% Similarity=0.400 Sum_probs=30.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSL 119 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~ 119 (479)
+++++|+|.|+ |++|.++++.|++.|. +++++|..
T Consensus 32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence 45789999998 9999999999999996 78888764
No 409
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.65 E-value=0.0028 Score=61.59 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~ 120 (479)
.+++|||+||+|.||..+++.+... |++|+++++..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~ 206 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE 206 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 5789999999999999999999999 99999988753
No 410
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.64 E-value=0.0024 Score=62.27 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=33.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+++|||+||+|.||...++.+...|++|+++++..
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 202 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST 202 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3578999999999999999999999999999998754
No 411
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.59 E-value=0.0031 Score=61.34 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=31.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+.+|||+|| |.+|...++.+...|+ +|+++++..
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~ 202 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSD 202 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 5789999999 9999999999999999 999988753
No 412
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.57 E-value=0.02 Score=55.62 Aligned_cols=176 Identities=13% Similarity=0.072 Sum_probs=94.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-----eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-----EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIG 159 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-----~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 159 (479)
+..+|.|+||+|.||.+++-.|+..+. .|.+.+.......+ .+.....++.+....-..-+.
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~------------~~~G~amDL~h~~~p~~~~v~- 97 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQ------------ALEGVAMELEDSLYPLLREVS- 97 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH------------HHHHHHHHHHTTTCTTEEEEE-
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhh------------hhHHHHHhHHhhhhhhcCCcE-
Confidence 356899999999999999999998753 26654432211000 011111222222211111111
Q ss_pred ccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc-CCcceEEEeecc---cccc
Q 011706 160 DICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF-RQECHLVKLGTM---GEYG 235 (479)
Q Consensus 160 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-g~~~~~V~~SS~---~v~g 235 (479)
+.+ ...+.++ +.|+||-+||...-+...+ ...++.|..-.+.+.+.+.+. +.+..++.+|-- .+|-
T Consensus 98 -i~~--~~y~~~~--daDvVVitag~prkpG~tR-----~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~i 167 (375)
T 7mdh_A 98 -IGI--DPYEVFE--DVDWALLIGAKPRGPGMER-----AALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALI 167 (375)
T ss_dssp -EES--CHHHHTT--TCSEEEECCCCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH
T ss_pred -Eec--CCHHHhC--CCCEEEEcCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHH
Confidence 111 1355666 8999999998643222222 236788999999999999885 666567766641 1110
Q ss_pred CCCCCCcCCceeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHHhCCceEEeecCeeecCC
Q 011706 236 TPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVR 301 (479)
Q Consensus 236 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ivRp~~v~Gp~ 301 (479)
. .... +.+ .+...-+.+-+-.-++-...++..|++..-++-..|.|..
T Consensus 168 a----~k~s-------------g~~-~~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeH 215 (375)
T 7mdh_A 168 C----LKNA-------------PDI-PAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNH 215 (375)
T ss_dssp H----HHTC-------------TTS-CGGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCS
T ss_pred H----HHHc-------------CCC-CccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecC
Confidence 0 0000 000 1122333445555566656677778765555543566754
No 413
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.57 E-value=0.013 Score=55.82 Aligned_cols=112 Identities=21% Similarity=0.126 Sum_probs=72.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccC--CCceeEEEcccC
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLT--GKNIELYIGDIC 162 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~ 162 (479)
++|.|+|| |.+|..++..|+..+ .+|+++|+....... ...++.+.. ...+.+.. |
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g----------------~a~dl~~~~~~~~~~~v~~-~-- 60 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQA----------------HAEDILHATPFAHPVWVWA-G-- 60 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHH----------------HHHHHHTTGGGSCCCEEEE-C--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHH----------------HHHHHHHhHhhcCCeEEEE-C--
Confidence 58999998 999999999999987 589999985421111 111111110 12333332 2
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ .++++ +.|+||..++...-+.... ...+..|+.-...+.+.+.+.+.+..++.+|
T Consensus 61 ~----~~a~~--~aD~Vii~ag~~~~~g~~r-----~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 61 S----YGDLE--GARAVVLAAGVAQRPGETR-----LQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp C----GGGGT--TEEEEEECCCCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred C----HHHhC--CCCEEEECCCCCCCCCcCH-----HHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 2 23466 8999999998643222211 2346778999999999999888776777664
No 414
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.54 E-value=0.0051 Score=59.64 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC-----C-eEEEEec
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG-----Y-EVAIVDS 118 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G-----~-~V~~~dr 118 (479)
++++|.|.||||++|+.|++.|++++ . +|+.+.+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s 47 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA 47 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEEC
Confidence 45799999999999999999999987 3 6776643
No 415
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.52 E-value=0.023 Score=54.29 Aligned_cols=116 Identities=17% Similarity=0.268 Sum_probs=70.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.++|.|+|+ |.+|..++..|+..|. +|+++|+........ ..+.... .......+.+.. | +
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~------------~~dl~~~-~~~~~~~~~i~~-~--~ 68 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGD------------AMDFNHG-KVFAPKPVDIWH-G--D 68 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHH------------HHHHHHH-TTSSSSCCEEEE-C--C
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHH------------HhhHHHH-hhhcCCCeEEEc-C--c
Confidence 579999999 9999999999988874 899999864311100 0000111 111111333332 2 2
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
. ++++ +.|+||-+++....+.... ...+..|..-...+.+.+.+......++.+|
T Consensus 69 ~----~al~--~aDvViia~~~~~~~g~~r-----~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t 123 (316)
T 1ldn_A 69 Y----DDCR--DADLVVICAGANQKPGETR-----LDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp G----GGTT--TCSEEEECCSCCCCTTTCS-----GGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred H----HHhC--CCCEEEEcCCCCCCCCCCH-----HHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence 2 3466 8999999998654332211 2245678888888898888877664555543
No 416
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.49 E-value=0.0054 Score=61.96 Aligned_cols=36 Identities=22% Similarity=0.170 Sum_probs=32.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSL 119 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~ 119 (479)
..+.+|||+||+|.||...++.+...|.+|+++++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC
Confidence 358899999999999999999999999999988864
No 417
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.42 E-value=0.0082 Score=58.94 Aligned_cols=35 Identities=29% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS 118 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr 118 (479)
..+.+|||+||+|.||...++.+...|.+|+++++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~ 216 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS 216 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 35789999999999999999999889999988763
No 418
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.42 E-value=0.0043 Score=58.92 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=32.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+++|||+||+|.+|...++.+...|++|+++++..
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~ 160 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP 160 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 578999999999999999999999999999998754
No 419
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.41 E-value=0.026 Score=54.07 Aligned_cols=120 Identities=12% Similarity=0.064 Sum_probs=69.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEE-cccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYI-GDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~Dl~d 163 (479)
.++|.|+|| |.+|..++..|+..|+ +|+++|+......... ..+.+... .. .....+.. .|
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~---------~~l~~~~~---~~-~~~~~i~~t~d--- 66 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKA---------LDTSHTNV---MA-YSNCKVSGSNT--- 66 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHH---------HHHHTHHH---HH-TCCCCEEEECC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH---------HHHHhhhh---hc-CCCcEEEECCC---
Confidence 468999998 9999999999999998 9988887543211100 00011100 01 11222222 23
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccc-cccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMI-DRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~-~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ ++++ +.|+||.+++...-..... ... -......|+.-.+.+.+.+.+...+..++.+|
T Consensus 67 ---~-~al~--~aD~Vi~a~g~p~k~g~~~qe~~-r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 126 (322)
T 1t2d_A 67 ---Y-DDLA--GADVVIVTAGFTKAPGKSDKEWN-RDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 126 (322)
T ss_dssp ---G-GGGT--TCSEEEECCSCSSCTTCCSTTCC-GGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred ---H-HHhC--CCCEEEEeCCCCCCCCCCccccc-HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 2 3466 8999999998532111100 000 01235568888888888888776665666554
No 420
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.40 E-value=0.0053 Score=55.23 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+++|.|+| +|.+|..+++.|++.|++|++++|..
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 467899999 69999999999999999999998754
No 421
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.39 E-value=0.017 Score=56.06 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+.+|||+|+ |.+|...++.+...|++|+++++..
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~ 202 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSP 202 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 4789999997 9999999998888899998888643
No 422
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.37 E-value=0.011 Score=58.18 Aligned_cols=70 Identities=21% Similarity=0.201 Sum_probs=53.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
..+++|+|+|+ |.+|+.+++.+.+.|++|+++|........ .. .-.++.+|+.|
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~----------------------~~---ad~~~~~~~~d 63 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR----------------------YV---AHEFIQAKYDD 63 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG----------------------GG---SSEEEECCTTC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh----------------------hh---CCEEEECCCCC
Confidence 46889999997 999999999999999999999864321100 00 12356789999
Q ss_pred hHHHHHHhhhcCCCEEEE
Q 011706 164 FEFLSESFKSFEPDAVVH 181 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih 181 (479)
.+.+.++.+ .+|+|..
T Consensus 64 ~~~l~~~~~--~~dvi~~ 79 (377)
T 3orq_A 64 EKALNQLGQ--KCDVITY 79 (377)
T ss_dssp HHHHHHHHH--HCSEEEE
T ss_pred HHHHHHHHH--hCCccee
Confidence 999999988 6888743
No 423
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.37 E-value=0.019 Score=59.06 Aligned_cols=35 Identities=26% Similarity=0.400 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSL 119 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~ 119 (479)
+++.+|+|+|+ |++|..+++.|++.|. +++++|..
T Consensus 325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35689999998 9999999999999996 78888754
No 424
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.32 E-value=0.019 Score=54.48 Aligned_cols=111 Identities=19% Similarity=0.195 Sum_probs=69.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
++++|.|+|| |.+|..++..|+..|. +|+++|.... ..+. ..++......++.. ..|
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~----------------a~dl~~~~~~~i~~-t~d-- 71 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGA----------------TMDLEIFNLPNVEI-SKD-- 71 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------C----------------HHHHHHHTCTTEEE-ESC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHH----------------HHHHhhhcCCCeEE-eCC--
Confidence 4578999997 9999999999999998 9999998542 1110 01111122234433 233
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ +.++ +.|+||-.+|... +.. +. ...+..|+.-.+.+.+.+.+......|+.+|
T Consensus 72 ----~-~~l~--~aD~Vi~aag~~~--pG~-tR---~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s 125 (303)
T 2i6t_A 72 ----L-SASA--HSKVVIFTVNSLG--SSQ-SY---LDVVQSNVDMFRALVPALGHYSQHSVLLVAS 125 (303)
T ss_dssp ----G-GGGT--TCSEEEECCCC------C-CH---HHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred ----H-HHHC--CCCEEEEcCCCCC--CCC-CH---HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence 2 3356 8999999998732 111 11 2345678888888998888877665666655
No 425
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.30 E-value=0.0062 Score=59.02 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+.+|||+|| |.+|...++.+...|+ +|+++++..
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 5789999999 9999999999888999 999988753
No 426
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.28 E-value=0.0037 Score=58.47 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=33.2
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..++++|+|+|+ |.+|+.++..|++.|++|++++|..
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence 356899999998 8899999999999999999998864
No 427
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.24 E-value=0.024 Score=58.32 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
+++.+|+|.|+ |++|..+++.|++.|. +++++|...
T Consensus 324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 35789999998 9999999999999996 788887643
No 428
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.23 E-value=0.032 Score=53.06 Aligned_cols=115 Identities=17% Similarity=0.102 Sum_probs=67.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKG--YEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G--~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
++|.|+| +|.+|..++..|++.| ++|+++|+....... +..............+.....| .
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~-------------~~~~l~~~~~~~~~~~~~~~~d---~ 64 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKA-------------DQIDFQDAMANLEAHGNIVIND---W 64 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH-------------HHHHHHHHGGGSSSCCEEEESC---G
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHH-------------HHHHHHhhhhhcCCCeEEEeCC---H
Confidence 6899999 5999999999999999 799999986432111 0000000000111223332233 2
Q ss_pred HHHHHHhhhcCCCEEEEcccccCc----ccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSA----PYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~----~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+.++ +.|+||-+++.... +.... ...+..|+.-...+++.+.+...+..++.+|
T Consensus 65 ----~~~~--~aDvViiav~~~~~~~~~~g~~r-----~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t 122 (309)
T 1hyh_A 65 ----AALA--DADVVISTLGNIKLQQDNPTGDR-----FAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp ----GGGT--TCSEEEECCSCGGGTC------------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred ----HHhC--CCCEEEEecCCcccCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 2455 79999999875331 11111 1245678888888888888766554555543
No 429
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.17 E-value=0.0087 Score=59.71 Aligned_cols=71 Identities=20% Similarity=0.109 Sum_probs=53.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+.+++|+|.|+ |.+|+.+++.+.+.|++|+++|....... ... .-..+..|+.
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~-------------------~~~------ad~~~~~~~~ 85 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPA-------------------GAV------ADRHLRAAYD 85 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHH-------------------HHH------SSEEECCCTT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCch-------------------hhh------CCEEEECCcC
Confidence 456899999997 89999999999999999999875432110 000 1134568999
Q ss_pred ChHHHHHHhhhcCCCEEEE
Q 011706 163 DFEFLSESFKSFEPDAVVH 181 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih 181 (479)
|.+.+.++.+ ++|+|+.
T Consensus 86 d~~~l~~~a~--~~D~V~~ 102 (419)
T 4e4t_A 86 DEAALAELAG--LCEAVST 102 (419)
T ss_dssp CHHHHHHHHH--HCSEEEE
T ss_pred CHHHHHHHHh--cCCEEEE
Confidence 9999999886 7999883
No 430
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.17 E-value=0.0049 Score=60.33 Aligned_cols=36 Identities=22% Similarity=0.354 Sum_probs=32.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
+++++|||+|| |.||..+++.+...|++|+++++..
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34899999999 9999999999988999999998754
No 431
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=96.15 E-value=0.03 Score=53.30 Aligned_cols=116 Identities=15% Similarity=0.102 Sum_probs=68.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC--CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
|+|.|+|+ |.+|..++..|+.. |++|+++|+.......... ++.+.. ... .....+... +|.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~---------~l~~~~---~~~-~~~~~i~~t--~d~ 64 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKAL---------DMYESG---PVG-LFDTKVTGS--NDY 64 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHH---------HHHTTH---HHH-TCCCEEEEE--SCG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHH---------hHHhhh---hcc-cCCcEEEEC--CCH
Confidence 47999998 99999999999985 7999999986432111000 000000 000 011111110 222
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ + ++ +.|+||-+++....+... ....+..|+.-...+.+.+.+.+.+..++.+|
T Consensus 65 ~---~-l~--~aDvViiav~~p~~~g~~-----r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 65 A---D-TA--NSDIVIITAGLPRKPGMT-----REDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp G---G-GT--TCSEEEECCSCCCCTTCC-----HHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred H---H-HC--CCCEEEEeCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 2 2 55 799999998743211111 12345678888889998888877665666664
No 432
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.14 E-value=0.0086 Score=57.85 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=25.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEE
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY---EVAIV 116 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~---~V~~~ 116 (479)
+++|+|.||||++|+.+++.|+++++ +++.+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i 39 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLL 39 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEE
Confidence 36899999999999999999997765 44544
No 433
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.14 E-value=0.0058 Score=59.24 Aligned_cols=35 Identities=14% Similarity=-0.005 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNK--GYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~--G~~V~~~dr~~ 120 (479)
.+.+|||+|| |.+|...++.+... |.+|+++++..
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~ 206 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSK 206 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCH
Confidence 5789999999 99999999988888 99999988643
No 434
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.14 E-value=0.041 Score=52.78 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=69.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.++|.|+|| |.+|..++..|+..|+ +|+++|+......... ..+.+..... ....++... .|
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~---------~~l~~~~~~~--~~~~~i~~t-~d---- 76 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKA---------LDLNHCMALI--GSPAKIFGE-NN---- 76 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHH---------HHHHHHHHHH--TCCCCEEEE-SC----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHH---------HHHHhHhhcc--CCCCEEEEC-CC----
Confidence 368999998 9999999999999998 9999988643211100 0011111100 011122211 23
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ ++++ +.|+||-+++...-+ .. +. ......|+.-.+.+.+.+.+...+..++.+|
T Consensus 77 --~-~al~--~aD~VI~avg~p~k~-g~-tr---~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 131 (328)
T 2hjr_A 77 --Y-EYLQ--NSDVVIITAGVPRKP-NM-TR---SDLLTVNAKIVGSVAENVGKYCPNAFVICIT 131 (328)
T ss_dssp --G-GGGT--TCSEEEECCSCCCCT-TC-CS---GGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred --H-HHHC--CCCEEEEcCCCCCCC-CC-ch---hhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence 2 3456 899999999753211 11 11 1234568888888888888776664555554
No 435
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.12 E-value=0.009 Score=57.85 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=30.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIV 116 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~ 116 (479)
..+.+|||+||+|.||...++.+...|++|+++
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~ 181 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT 181 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence 358899999999999999999999999999987
No 436
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.08 E-value=0.031 Score=46.68 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=28.4
Q ss_pred CcEEEEEcCC---chhhHHHHHHHHhCCCeEEEEe
Q 011706 86 AKRVMIIGGD---GYCGWATALHLSNKGYEVAIVD 117 (479)
Q Consensus 86 ~~~vLVtGat---G~iG~~l~~~Ll~~G~~V~~~d 117 (479)
.++|.|+|++ |.+|..+++.|.+.|++|+.++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn 56 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN 56 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC
Confidence 5789999998 8999999999999999976654
No 437
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.07 E-value=0.0066 Score=56.80 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=32.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIR 121 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~ 121 (479)
.++++++|+|+ |.+|+.++..|++.|+ +|++++|...
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 46889999997 9999999999999998 8999887543
No 438
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.05 E-value=0.0095 Score=59.52 Aligned_cols=95 Identities=15% Similarity=0.243 Sum_probs=60.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-C---eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEccc
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKG-Y---EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDI 161 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G-~---~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 161 (479)
.++|+|.| .|.||+.++..|++++ + +|+++|...... + + .+. .++.+...++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~-------------~---~~~------~g~~~~~~~V 68 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-D-------------V---AQQ------YGVSFKLQQI 68 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-C-------------H---HHH------HTCEEEECCC
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-h-------------H---Hhh------cCCceeEEec
Confidence 35799999 5999999999999974 4 688887533210 0 0 001 1345555565
Q ss_pred CC--h-HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeecc
Q 011706 162 CD--F-EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTM 231 (479)
Q Consensus 162 ~d--~-~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~ 231 (479)
++ . +.+.+++++ .|+|||.+-. . ....++++|.+.|+. |++|+
T Consensus 69 dadnv~~~l~aLl~~--~DvVIN~s~~----~-----------------~~l~Im~acleaGv~----YlDTa 114 (480)
T 2ph5_A 69 TPQNYLEVIGSTLEE--NDFLIDVSIG----I-----------------SSLALIILCNQKGAL----YINAA 114 (480)
T ss_dssp CTTTHHHHTGGGCCT--TCEEEECCSS----S-----------------CHHHHHHHHHHHTCE----EEESS
T ss_pred cchhHHHHHHHHhcC--CCEEEECCcc----c-----------------cCHHHHHHHHHcCCC----EEECC
Confidence 44 3 335667774 4999986521 0 123689999999854 66665
No 439
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.02 E-value=0.019 Score=53.28 Aligned_cols=37 Identities=27% Similarity=0.320 Sum_probs=33.5
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS 118 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr 118 (479)
..+.|++++|+|+++.+|+.++..|++.|..|+++++
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~ 192 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHI 192 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 3568999999999999999999999999999998764
No 440
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.00 E-value=0.028 Score=55.38 Aligned_cols=70 Identities=23% Similarity=0.262 Sum_probs=52.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+.+|+|+|+|+ |.+|..+++.+.+.|++|+++|........ . ..-..+..|+.
T Consensus 11 ~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~----------------------~---~ad~~~~~~~~ 64 (389)
T 3q2o_A 11 ILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCA----------------------Q---VADIEIVASYD 64 (389)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTT----------------------T---TCSEEEECCTT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchH----------------------H---hCCceEecCcC
Confidence 346899999997 889999999999999999999864321100 0 01134568889
Q ss_pred ChHHHHHHhhhcCCCEEE
Q 011706 163 DFEFLSESFKSFEPDAVV 180 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vi 180 (479)
|.+.+.++++ .+|+|.
T Consensus 65 d~~~l~~~~~--~~dvI~ 80 (389)
T 3q2o_A 65 DLKAIQHLAE--ISDVVT 80 (389)
T ss_dssp CHHHHHHHHH--TCSEEE
T ss_pred CHHHHHHHHH--hCCEee
Confidence 9999999988 689874
No 441
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=96.00 E-value=0.056 Score=53.82 Aligned_cols=126 Identities=15% Similarity=0.166 Sum_probs=71.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccC----CCCCCccchhhhhhhhhcccC-CCceeEEE
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLG----LDSLTPIASIHDRLRCWKSLT-GKNIELYI 158 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~ 158 (479)
+..+|+|.|+ |++|..+++.|++.|. +++++|...=...+.... ...+. ........+.+..+. .-.++.+.
T Consensus 39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG-~~Ka~~a~~~l~~lnp~v~v~~~~ 116 (434)
T 1tt5_B 39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIG-RPKAEVAAEFLNDRVPNCNVVPHF 116 (434)
T ss_dssp HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTT-SBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcC-cHHHHHHHHHHHhhCCCCEEEEEe
Confidence 4678999998 9999999999999996 788887543111111000 00000 011112222333322 23567777
Q ss_pred cccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHc----------CCcceEEEe
Q 011706 159 GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF----------RQECHLVKL 228 (479)
Q Consensus 159 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----------g~~~~~V~~ 228 (479)
.++.+.. .+.++ ++|+||.+.. |...-..+-++|.+. ..++.+|+.
T Consensus 117 ~~i~~~~--~~~~~--~~DlVi~~~D--------------------n~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~ 172 (434)
T 1tt5_B 117 NKIQDFN--DTFYR--QFHIIVCGLD--------------------SIIARRWINGMLISLLNYEDGVLDPSSIVPLIDG 172 (434)
T ss_dssp SCGGGBC--HHHHT--TCSEEEECCS--------------------CHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEE
T ss_pred cccchhh--HHHhc--CCCEEEECCC--------------------CHHHHHHHHHHHHHhhhccccccccccCCcEEEe
Confidence 7775533 35666 7899998742 333334455566553 012468888
Q ss_pred eccccccC
Q 011706 229 GTMGEYGT 236 (479)
Q Consensus 229 SS~~v~g~ 236 (479)
++.+.+|.
T Consensus 173 ~~~g~~G~ 180 (434)
T 1tt5_B 173 GTEGFKGN 180 (434)
T ss_dssp EEETTEEE
T ss_pred ccccceeE
Confidence 87665553
No 442
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.99 E-value=0.034 Score=53.55 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=26.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEe
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKG---YEVAIVD 117 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G---~~V~~~d 117 (479)
+++|.|.||||++|+.+++.|++++ .+++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 5789999999999999999999984 3566554
No 443
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.99 E-value=0.031 Score=53.11 Aligned_cols=112 Identities=17% Similarity=0.202 Sum_probs=70.9
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhccc---CCCceeEEE-cccC
Q 011706 88 RVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL---TGKNIELYI-GDIC 162 (479)
Q Consensus 88 ~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~-~Dl~ 162 (479)
+|.|+|| |.+|..++..|+..|. +|+++|+....... ...++.+. ......+.. .|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g----------------~~~dl~~~~~~~~~~~~i~~t~d-- 61 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQG----------------EALDLAHAAAELGVDIRISGSNS-- 61 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHH----------------HHHHHHHHHHHHTCCCCEEEESC--
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHH----------------HHHHHHHhhhhcCCCeEEEECCC--
Confidence 4889998 9999999999998887 69999975431111 01111110 112223332 33
Q ss_pred ChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
. ++++ +.|+||-.++...-+.... ...+..|+.-.+.+.+.+.+......++.+|-
T Consensus 62 -~----~a~~--~aD~Vi~~ag~~~k~G~~r-----~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 62 -Y----EDMR--GSDIVLVTAGIGRKPGMTR-----EQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp -G----GGGT--TCSEEEECCSCCCCSSCCT-----HHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred -H----HHhC--CCCEEEEeCCCCCCCCCcH-----HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 2 2466 8999999998643222211 23456788889999999988776656776653
No 444
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.97 E-value=0.015 Score=56.23 Aligned_cols=33 Identities=33% Similarity=0.429 Sum_probs=28.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEec
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDS 118 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr 118 (479)
+++|.|.||||++|+.+++.|+++.. +++.+..
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s 37 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTS 37 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 47899999999999999999998754 7776654
No 445
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.97 E-value=0.047 Score=52.11 Aligned_cols=118 Identities=13% Similarity=0.093 Sum_probs=68.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.++|.|+|+ |.+|..++..|+..|+ +|+++|+........ ..++..... .. ....++.. ..|
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~---------~~~l~~~~~-~~-~~~~~i~~-t~d---- 66 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK---------ALDITHSMV-MF-GSTSKVIG-TDD---- 66 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH---------HHHHHHHHH-HH-TCCCCEEE-ESC----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH---------HHHHHhhhh-hc-CCCcEEEE-CCC----
Confidence 468999998 9999999999999998 999998864321110 000000000 00 00112221 122
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeec
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS 230 (479)
+ ++++ +.|+||-+++....+.... ...+.-|....+.+++...+...+..++.+|.
T Consensus 67 --~-~a~~--~aDiVi~avg~p~~~g~~r-----~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 67 --Y-ADIS--GSDVVIITASIPGRPKDDR-----SELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp --G-GGGT--TCSEEEECCCCSSCCSSCG-----GGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred --H-HHhC--CCCEEEEeCCCCCCCCCcH-----HHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 2 2455 7999999998643222211 12345577777888888877765545665554
No 446
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.92 E-value=0.047 Score=52.17 Aligned_cols=114 Identities=18% Similarity=0.225 Sum_probs=68.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
|+|.|+|+ |.+|..++..|+..|+ +|+++|+....... +...+....... ....+.. +|.
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~-------------~~~~l~~~~~~~-~~~~i~~---~d~ 62 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEG-------------DALDLIHGTPFT-RRANIYA---GDY 62 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH-------------HHHHHHHHGGGS-CCCEEEE---CCG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHH-------------HHHHHHhhhhhc-CCcEEEe---CCH
Confidence 57999998 9999999999999999 99999986431111 000000000010 1122221 232
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEee
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLG 229 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~S 229 (479)
+ .++ +.|+||-+++....+.... ......|+.....+++.+.+......+|.+|
T Consensus 63 ~----~~~--~aDvViiav~~~~~~g~~r-----~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t 116 (319)
T 1a5z_A 63 A----DLK--GSDVVIVAAGVPQKPGETR-----LQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp G----GGT--TCSEEEECCCCCCCSSCCH-----HHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred H----HhC--CCCEEEEccCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 2 355 7999999987533211111 1235668888888888888776554565554
No 447
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.91 E-value=0.03 Score=46.38 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=29.6
Q ss_pred CCCCcEEEEEcCC---chhhHHHHHHHHhCCCeEEEEec
Q 011706 83 PSKAKRVMIIGGD---GYCGWATALHLSNKGYEVAIVDS 118 (479)
Q Consensus 83 ~~~~~~vLVtGat---G~iG~~l~~~Ll~~G~~V~~~dr 118 (479)
.++.++|.|+|++ |-+|..+++.|++.|++|+.++.
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp 49 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP 49 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCC
Confidence 4567899999997 89999999999999999877654
No 448
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.91 E-value=0.12 Score=48.41 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEE
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVA 114 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~ 114 (479)
+.++|+|.|++|-.|+.+++.|.+.|++++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v 35 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIV 35 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEE
Confidence 457899999999999999999999999855
No 449
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.90 E-value=0.014 Score=58.53 Aligned_cols=34 Identities=41% Similarity=0.432 Sum_probs=30.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccc
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIR 121 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~ 121 (479)
|+|.|+| +|++|..++..|++.|++|+++|+...
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4799998 599999999999999999999998654
No 450
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.87 E-value=0.0092 Score=58.01 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=24.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCe
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYE 112 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~ 112 (479)
+++|.|.||||++|..|++.|.++++.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p 28 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLP 28 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCC
Confidence 468999999999999999999987663
No 451
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.83 E-value=0.033 Score=53.31 Aligned_cols=36 Identities=22% Similarity=0.430 Sum_probs=31.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIR 121 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~ 121 (479)
.+|+|.|+|. |.+|..+++.|++.|++|++.|+...
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4679999976 99999999999999999999988643
No 452
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.82 E-value=0.035 Score=54.27 Aligned_cols=34 Identities=26% Similarity=0.224 Sum_probs=30.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEe
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVD 117 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~d 117 (479)
..+.+|||+||+|.+|...++.+...|++|+++.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3578999999999999999999999999998775
No 453
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=95.80 E-value=0.036 Score=54.51 Aligned_cols=72 Identities=24% Similarity=0.221 Sum_probs=53.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+|+|||+|+ |.+|..+++.+.+.|++|++++........ . . .-..+..|..|.
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-------------------~---~---~d~~~~~~~~d~ 63 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-------------------H---V---AHRSHVINMLDG 63 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-------------------G---G---SSEEEECCTTCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-------------------h---h---ccceEECCCCCH
Confidence 4689999987 789999999999999999999864321000 0 0 113456788888
Q ss_pred HHHHHHhhhcCCCEEEEc
Q 011706 165 EFLSESFKSFEPDAVVHF 182 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~ 182 (479)
+.+.++++..++|+|+..
T Consensus 64 ~~l~~~~~~~~~d~v~~~ 81 (391)
T 1kjq_A 64 DALRRVVELEKPHYIVPE 81 (391)
T ss_dssp HHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 888888876689999864
No 454
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.79 E-value=0.015 Score=54.18 Aligned_cols=37 Identities=24% Similarity=0.443 Sum_probs=32.6
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
..++++++|+|+ |.+|+.++..|++.|. +|++++|..
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 457899999998 8999999999999996 899988754
No 455
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.78 E-value=0.02 Score=55.74 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=28.5
Q ss_pred CcEEEEEcCCchhhHHH-HHHH-HhCCCe-EEEEeccc
Q 011706 86 AKRVMIIGGDGYCGWAT-ALHL-SNKGYE-VAIVDSLI 120 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l-~~~L-l~~G~~-V~~~dr~~ 120 (479)
+.+|||+|| |.+|... ++.+ ...|.+ |+++++..
T Consensus 173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~ 209 (357)
T 2b5w_A 173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRD 209 (357)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCc
Confidence 389999999 9999999 7777 667987 99988743
No 456
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.77 E-value=0.024 Score=58.11 Aligned_cols=126 Identities=14% Similarity=0.040 Sum_probs=71.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccccccccc--cc--CCCCCCccchhhhhhhhhcccCC-CceeEEE
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDH--QL--GLDSLTPIASIHDRLRCWKSLTG-KNIELYI 158 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~-~~v~~v~ 158 (479)
+..+|||.|+ |++|..+++.|++.|. +++++|...=...+. +. ....+. ........+.+.++.. -.+..+.
T Consensus 31 ~~~~VlvvG~-GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG-~~Ka~~a~~~l~~lNp~v~v~~~~ 108 (531)
T 1tt5_A 31 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIG-KNRAEAAMEFLQELNSDVSGSFVE 108 (531)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBT-SBHHHHHHHHHHTTCTTSBCCEES
T ss_pred hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcC-cHHHHHHHHHHHHhCCCCeEEEeC
Confidence 4569999997 9999999999999996 788887542111110 00 000011 0111112223333321 2445555
Q ss_pred cccCCh-HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccC
Q 011706 159 GDICDF-EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236 (479)
Q Consensus 159 ~Dl~d~-~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~ 236 (479)
.++++. +...+.+. ++|+||.+.. |...-..+.++|.+.+ +.+|..++.+.+|.
T Consensus 109 ~~~~~~~~~~~~~~~--~~DvVi~~~d--------------------~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~ 163 (531)
T 1tt5_A 109 ESPENLLDNDPSFFC--RFTVVVATQL--------------------PESTSLRLADVLWNSQ--IPLLICRTYGLVGY 163 (531)
T ss_dssp SCHHHHHHSCGGGGG--GCSEEEEESC--------------------CHHHHHHHHHHHHHTT--CCEEEEEEETTEEE
T ss_pred CCcchhhhhhHHHhc--CCCEEEEeCC--------------------CHHHHHHHHHHHHHcC--CCEEEEEecCCeEE
Confidence 544321 11223455 7899997742 4444456778888887 46888888777665
No 457
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.77 E-value=0.021 Score=56.89 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIR 121 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~ 121 (479)
++.+|.|+|. ||+|.-++..|++.|++|+++|....
T Consensus 20 ~m~~IaViGl-GYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 20 HMASLSVLGL-GYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 4679999975 99999999999999999999998654
No 458
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.75 E-value=0.038 Score=52.41 Aligned_cols=82 Identities=17% Similarity=0.073 Sum_probs=54.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+.+++++|+|++.-+|..+++.|+..|.+|++++|........ ...+ ............+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~r----------------a~~l---a~~~~~~t~~~~t 234 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTR----------------GESL---KLNKHHVEDLGEY 234 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEES----------------CCCS---SCCCCEEEEEEEC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhH----------------HHHH---hhhcccccccccc
Confidence 56799999999988899999999999999999998753321111 0001 0000111111113
Q ss_pred ChHHHHHHhhhcCCCEEEEcccc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~~ 185 (479)
+++.+.+.+. ..|+||...+.
T Consensus 235 ~~~~L~e~l~--~ADIVIsAtg~ 255 (320)
T 1edz_A 235 SEDLLKKCSL--DSDVVITGVPS 255 (320)
T ss_dssp CHHHHHHHHH--HCSEEEECCCC
T ss_pred cHhHHHHHhc--cCCEEEECCCC
Confidence 4577888888 78999998875
No 459
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.74 E-value=0.03 Score=51.97 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=33.4
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS 118 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr 118 (479)
..+.|++++|.|++|.+|+.++..|++.|.+|+++.+
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs 193 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHR 193 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence 3568999999999999999999999999999998753
No 460
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.74 E-value=0.042 Score=53.33 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+.+|||+|+ |.+|...++.+...|. +|+++++..
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~ 206 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA 206 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 4789999996 9999999998888898 899988653
No 461
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.73 E-value=0.031 Score=54.68 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
..+.+|||+|+ |.+|...++.+...|. +|+++++..
T Consensus 191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~ 227 (374)
T 1cdo_A 191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP 227 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence 35789999996 9999999998888998 799887643
No 462
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=95.72 E-value=0.024 Score=47.07 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=28.3
Q ss_pred CcEEEEEcCC---chhhHHHHHHHHhCCCeEEEEe
Q 011706 86 AKRVMIIGGD---GYCGWATALHLSNKGYEVAIVD 117 (479)
Q Consensus 86 ~~~vLVtGat---G~iG~~l~~~Ll~~G~~V~~~d 117 (479)
.++|.|.|++ |-+|..+++.|.+.|++|+.++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vn 47 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVN 47 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeC
Confidence 5789999998 8899999999999999977654
No 463
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.70 E-value=0.047 Score=49.94 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=48.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
++|.|+|++|-+|+.+++.+.+. |++|+++...... +.+... .... +..|.+.++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d----------------l~~~~~-------~~~D-vvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP----------------LSLLTD-------GNTE-VVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC----------------THHHHH-------TTCC-EEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC----------------HHHHhc-------cCCc-EEEEccChH
Confidence 47999999999999999999876 8998865432110 001010 1122 567888887
Q ss_pred HHHHHhh---hcCCCEEEEccc
Q 011706 166 FLSESFK---SFEPDAVVHFGE 184 (479)
Q Consensus 166 ~~~~~~~---~~~~D~Vih~A~ 184 (479)
...+.+. +.+.++|+-..|
T Consensus 57 a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 57 VVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp THHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCEEEcCCC
Confidence 6665442 347888885554
No 464
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.69 E-value=0.027 Score=55.32 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr~~ 120 (479)
.+.+|||+| +|.+|...++.+...| .+|+++++..
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~ 230 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSP 230 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCH
Confidence 478999999 8999999999888899 6999998653
No 465
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.67 E-value=0.037 Score=54.11 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+.+|||+|+ |.+|...++.+...|. +|+++++..
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~ 226 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK 226 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 5789999995 9999999998888898 799887653
No 466
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.66 E-value=0.034 Score=51.66 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=32.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS 118 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr 118 (479)
.+.|++++|+|+++.+|+.++..|++.|.+|+++.+
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs 193 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR 193 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence 568999999999999999999999999999988753
No 467
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.65 E-value=0.033 Score=52.14 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=33.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS 118 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr 118 (479)
.+.|++++|+|++|.+|+.++..|++.|++|+++++
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~ 197 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHS 197 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 568999999999999999999999999999998865
No 468
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.65 E-value=0.02 Score=56.83 Aligned_cols=36 Identities=25% Similarity=0.430 Sum_probs=32.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
..+++|+|+|+ |.+|..+++.|...|. +|++++|..
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46899999998 9999999999999998 899988754
No 469
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=95.64 E-value=0.036 Score=54.31 Aligned_cols=69 Identities=25% Similarity=0.284 Sum_probs=51.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChH
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFE 165 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 165 (479)
||+|+|+|+ |.+|..+++.|.+.|++|++++....... .. . .-..+..|+.|.+
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~-------------------~~---~---~~~~~~~~~~d~~ 54 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPA-------------------GQ---V---ADEQIVAGFFDSE 54 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTT-------------------GG---G---SSEEEECCTTCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCch-------------------hh---h---CceEEECCCCCHH
Confidence 478999997 89999999999999999999886432100 00 0 1124567889999
Q ss_pred HHHHHhhhcCCCEEEEc
Q 011706 166 FLSESFKSFEPDAVVHF 182 (479)
Q Consensus 166 ~~~~~~~~~~~D~Vih~ 182 (479)
.+.++.+ ++|.|+..
T Consensus 55 ~l~~~~~--~~d~v~~~ 69 (380)
T 3ax6_A 55 RIEDLVK--GSDVTTYD 69 (380)
T ss_dssp HHHHHHH--TCSEEEES
T ss_pred HHHHHHh--cCCEEEec
Confidence 8988885 89998853
No 470
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.64 E-value=0.012 Score=55.30 Aligned_cols=37 Identities=14% Similarity=0.243 Sum_probs=32.8
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+++++++|+|+ |.+|+.++..|++.|. +|++++|..
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 457899999998 8999999999999996 899998854
No 471
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.63 E-value=0.14 Score=48.06 Aligned_cols=31 Identities=19% Similarity=0.110 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEE
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAI 115 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~ 115 (479)
+.++|.|.|+||.+|+.+++.|.+.|++++.
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~ 36 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVG 36 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEE
Confidence 4578999999999999999999998998653
No 472
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.63 E-value=0.014 Score=56.89 Aligned_cols=34 Identities=26% Similarity=0.538 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEec
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKG-YEVAIVDS 118 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G-~~V~~~dr 118 (479)
++++|.|.||+|++|+.+++.|.++. .+++.+..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~ 49 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTA 49 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBC
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeC
Confidence 34689999999999999999999885 47777654
No 473
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.61 E-value=0.037 Score=54.21 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+.+|||+|+ |.+|...++.+...|. +|+++++..
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~ 230 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDING 230 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 5789999996 9999999998888898 799887643
No 474
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.056 Score=51.97 Aligned_cols=37 Identities=27% Similarity=0.287 Sum_probs=33.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+.+|+|.|+|. |-||+.+++.|...|++|++.++..
T Consensus 168 ~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~ 204 (340)
T 4dgs_A 168 SPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRST 204 (340)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred cccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 567999999987 9999999999999999999988753
No 475
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.58 E-value=0.025 Score=55.17 Aligned_cols=26 Identities=19% Similarity=0.333 Sum_probs=21.2
Q ss_pred CcEEEEEcCCchhhHHHHHH-HHhCCC
Q 011706 86 AKRVMIIGGDGYCGWATALH-LSNKGY 111 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~-Ll~~G~ 111 (479)
|++|.|.||+|++|+.|++. |.++++
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~ 27 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDF 27 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGG
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCC
Confidence 36899999999999999995 544554
No 476
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.58 E-value=0.076 Score=50.98 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=29.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEecc
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSL 119 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~ 119 (479)
|++|.|+||||++|..|++.|.++ ++++..+...
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~ 38 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVS 38 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEec
Confidence 579999999999999999999985 5688877543
No 477
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.58 E-value=0.024 Score=55.27 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSN-KGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~-~G~~V~~~dr~~ 120 (479)
.+.+|||+||+|.+|...++.+.. .|.+|+++++..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~ 207 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRP 207 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 578999999999999988877765 589999988753
No 478
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.57 E-value=0.078 Score=50.50 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=66.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 86 AKRVMIIGGDGYCGWATALHLSNKGY--EVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 86 ~~~vLVtGatG~iG~~l~~~Ll~~G~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
.|+|.|+|+ |.+|..++..|+..|+ +|+++|+........ ..+..... ... ....+... ++
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~------------~~~~~~~~-~~~-~~~~v~~~--~~ 69 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAE------------VLDMQHGS-SFY-PTVSIDGS--DD 69 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHH------------HHHHHHTG-GGS-TTCEEEEE--SC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHH------------HHHHHhhh-hhc-CCeEEEeC--CC
Confidence 478999998 9999999999999998 999999864211100 00000000 011 11222211 12
Q ss_pred hHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEe
Q 011706 164 FEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKL 228 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~ 228 (479)
.+ .++ ++|+||-+++....+.... ...+..|+.....+++...+.+.+..++.+
T Consensus 70 ~~----~~~--~aD~Vii~v~~~~~~g~~r-----~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~ 123 (319)
T 1lld_A 70 PE----ICR--DADMVVITAGPRQKPGQSR-----LELVGATVNILKAIMPNLVKVAPNAIYMLI 123 (319)
T ss_dssp GG----GGT--TCSEEEECCCCCCCTTCCH-----HHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred HH----HhC--CCCEEEECCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 22 345 7999999987533221111 224566888888888887776555344443
No 479
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.56 E-value=0.026 Score=56.78 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=31.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccc
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIR 121 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~ 121 (479)
|+|.|+|+ |++|..++..|++.|++|+++|+...
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 68999986 99999999999999999999998654
No 480
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.53 E-value=0.068 Score=55.44 Aligned_cols=69 Identities=19% Similarity=0.165 Sum_probs=54.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCChHH
Q 011706 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEF 166 (479)
Q Consensus 87 ~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 166 (479)
++++|.|+ |-+|.++++.|.+.|++|+++|...... +. . ..++.||-+|.+.
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~--------------------~~---~----~~~i~gD~t~~~~ 400 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPV--------------------CN---D----HVVVYGDATVGQT 400 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSS--------------------CC---S----SCEEESCSSSSTH
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHH--------------------hh---c----CCEEEeCCCCHHH
Confidence 78999998 9999999999999999999999764321 11 1 1789999999998
Q ss_pred HHHHhhhcCCCEEEEccc
Q 011706 167 LSESFKSFEPDAVVHFGE 184 (479)
Q Consensus 167 ~~~~~~~~~~D~Vih~A~ 184 (479)
++++=-+ +.|.||-+.+
T Consensus 401 L~~agi~-~ad~vi~~~~ 417 (565)
T 4gx0_A 401 LRQAGID-RASGIIVTTN 417 (565)
T ss_dssp HHHHTTT-SCSEEEECCS
T ss_pred HHhcCcc-ccCEEEEECC
Confidence 8876433 7899986654
No 481
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.53 E-value=0.033 Score=55.17 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=52.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+++|+|+|+ |.+|..+++.+.+.|++|+++| ....... . +. .....+.+|..|.
T Consensus 23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~-------------------~---~a-d~~~~~~~~~~d~ 77 (403)
T 3k5i_A 23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAK-------------------Q---IS-AHDGHVTGSFKER 77 (403)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTG-------------------G---GC-CSSCCEESCTTCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHH-------------------H---hc-cccceeecCCCCH
Confidence 4789999998 8999999999999999999998 4321100 0 00 1124567899999
Q ss_pred HHHHHHhhhcCCCEEEE
Q 011706 165 EFLSESFKSFEPDAVVH 181 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih 181 (479)
+.+.++.+ .+|+|+-
T Consensus 78 ~~l~~~a~--~~d~i~~ 92 (403)
T 3k5i_A 78 EAVRQLAK--TCDVVTA 92 (403)
T ss_dssp HHHHHHHT--TCSEEEE
T ss_pred HHHHHHHH--hCCEEEE
Confidence 99999998 6888764
No 482
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.49 E-value=0.026 Score=55.20 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
.+.+|||+|+ |.+|...++.+...|+ +|+++++..
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~ 217 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQA 217 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 4789999998 9999999998888998 888887643
No 483
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.49 E-value=0.032 Score=51.54 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=32.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEec
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDS 118 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr 118 (479)
+.|++++|.|+++.+|+.++..|++.|++|+++++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 68999999999999999999999999999998754
No 484
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=95.48 E-value=0.078 Score=50.63 Aligned_cols=37 Identities=24% Similarity=0.197 Sum_probs=33.4
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+.+++|.|+|- |-||+.+++.|...|++|+++++..
T Consensus 137 ~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~ 173 (324)
T 3hg7_A 137 GLKGRTLLILGT-GSIGQHIAHTGKHFGMKVLGVSRSG 173 (324)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccccceEEEEEE-CHHHHHHHHHHHhCCCEEEEEcCCh
Confidence 567999999986 9999999999999999999998754
No 485
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.47 E-value=0.032 Score=54.57 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
..+.+|||+|+ |.+|...++.+...|. +|+++++..
T Consensus 189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~ 225 (373)
T 2fzw_A 189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINK 225 (373)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 35789999996 9999999998888898 799887643
No 486
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.46 E-value=0.019 Score=56.38 Aligned_cols=36 Identities=25% Similarity=0.219 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
..+.+|||+|+ |.+|...++.+...|+ +|+++++..
T Consensus 192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDS 228 (378)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 35789999998 9999999988888898 799988654
No 487
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.44 E-value=0.019 Score=54.90 Aligned_cols=74 Identities=23% Similarity=0.191 Sum_probs=50.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCC
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICD 163 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d 163 (479)
..+.+|||+||+|.+|...++.+...|.+|+++++..+ .+...++ +... ..|..+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~---------------------~~~~~~l---Ga~~-~i~~~~ 205 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN---------------------HAFLKAL---GAEQ-CINYHE 205 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH---------------------HHHHHHH---TCSE-EEETTT
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch---------------------HHHHHHc---CCCE-EEeCCC
Confidence 35789999999999999999999999999988764221 1111111 1211 235545
Q ss_pred hHHHHHHhhhcCCCEEEEccc
Q 011706 164 FEFLSESFKSFEPDAVVHFGE 184 (479)
Q Consensus 164 ~~~~~~~~~~~~~D~Vih~A~ 184 (479)
.+.+.+.+. ++|+||++.|
T Consensus 206 ~~~~~~~~~--g~D~v~d~~g 224 (321)
T 3tqh_A 206 EDFLLAIST--PVDAVIDLVG 224 (321)
T ss_dssp SCHHHHCCS--CEEEEEESSC
T ss_pred cchhhhhcc--CCCEEEECCC
Confidence 443555555 8999999987
No 488
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.44 E-value=0.026 Score=55.07 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=31.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+.+|||+| +|.+|...++.+...|++|+++++..
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~ 223 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSR 223 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCc
Confidence 3578999999 89999999999988999999988653
No 489
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.41 E-value=0.047 Score=54.06 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=30.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEeccc
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLI 120 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~ 120 (479)
..+.+|||+|+ |.+|...++.+...|+ +|+++++..
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~ 248 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSE 248 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 35789999998 9999999998888899 899887643
No 490
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.41 E-value=0.028 Score=53.03 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=33.3
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+.+++|+|+|+ |.||+.+++.|...|.+|+++++..
T Consensus 152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence 467899999996 9999999999999999999998754
No 491
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.38 E-value=0.066 Score=50.04 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEE-ec
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNK-GYEVAIV-DS 118 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~-dr 118 (479)
++.+|.|.|++|-+|+.+++.+.+. +.+++++ |+
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~ 55 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVR 55 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 3568999999999999999998876 6787765 44
No 492
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=95.38 E-value=0.029 Score=54.56 Aligned_cols=35 Identities=23% Similarity=0.128 Sum_probs=30.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNK-GYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~-G~~V~~~dr~~ 120 (479)
.+.+|||+|| |.+|...++.+... |++|+++++..
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~ 221 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKE 221 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence 5789999999 99999999988888 99999998643
No 493
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.37 E-value=0.029 Score=53.18 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccC
Q 011706 83 PSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDIC 162 (479)
Q Consensus 83 ~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 162 (479)
.+.+++|+|+|+ |.+|+.+++.|...|.+|+++++.... .+...+ .++..+
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~--------------------~~~~~~---~g~~~~----- 204 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAH--------------------LARITE---MGLVPF----- 204 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHH--------------------HHHHHH---TTCEEE-----
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHH--------------------HHHHHH---CCCeEE-----
Confidence 467899999997 999999999999999999999975431 111111 122222
Q ss_pred ChHHHHHHhhhcCCCEEEEccc
Q 011706 163 DFEFLSESFKSFEPDAVVHFGE 184 (479)
Q Consensus 163 d~~~~~~~~~~~~~D~Vih~A~ 184 (479)
+.++++++++ +.|+|+.+..
T Consensus 205 ~~~~l~~~l~--~aDvVi~~~p 224 (300)
T 2rir_A 205 HTDELKEHVK--DIDICINTIP 224 (300)
T ss_dssp EGGGHHHHST--TCSEEEECCS
T ss_pred chhhHHHHhh--CCCEEEECCC
Confidence 1245777777 7999998875
No 494
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=95.35 E-value=0.013 Score=56.16 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 88 ~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
+|||+||+|.+|...++.+...|++|+++++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~ 184 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA 184 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 799999999999999999988999999988753
No 495
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.35 E-value=0.03 Score=54.71 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=49.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.+.+|||+|+ |.+|...++.+...|.+|+++++.... .+...++ +... ..|..+.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~--------------------~~~a~~l---Ga~~-vi~~~~~ 248 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAK--------------------REAAKAL---GADE-VVNSRNA 248 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGG--------------------HHHHHHH---TCSE-EEETTCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH--------------------HHHHHHc---CCcE-EeccccH
Confidence 5789999998 889999999888889999998865431 1111111 1111 2355555
Q ss_pred HHHHHHhhhcCCCEEEEcccc
Q 011706 165 EFLSESFKSFEPDAVVHFGEQ 185 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~ 185 (479)
+.++++.. ++|+||+++|.
T Consensus 249 ~~~~~~~~--g~Dvvid~~g~ 267 (369)
T 1uuf_A 249 DEMAAHLK--SFDFILNTVAA 267 (369)
T ss_dssp HHHHTTTT--CEEEEEECCSS
T ss_pred HHHHHhhc--CCCEEEECCCC
Confidence 54544443 79999999874
No 496
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.33 E-value=0.073 Score=53.61 Aligned_cols=98 Identities=23% Similarity=0.423 Sum_probs=67.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
.-++|+|.|| |-+|.++++.| +++++|.++.+... +.+.+.+.. ++..++.||-+|+
T Consensus 234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~--------------------r~~~la~~l-~~~~Vi~GD~td~ 290 (461)
T 4g65_A 234 PYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQ--------------------RAEKLSEEL-ENTIVFCGDAADQ 290 (461)
T ss_dssp CCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHH--------------------HHHHHHHHC-TTSEEEESCTTCH
T ss_pred cccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHH--------------------HHHHHHHHC-CCceEEeccccch
Confidence 3578999998 99999999987 55799999876543 222322221 4788999999999
Q ss_pred HHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEE
Q 011706 165 EFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVK 227 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~ 227 (479)
+-++++=-. ..|++|-.-+. | +.|+. +...|++.|++ +.|-
T Consensus 291 ~~L~ee~i~-~~D~~ia~T~~--------D--------e~Ni~----~~llAk~~gv~-kvIa 331 (461)
T 4g65_A 291 ELLTEENID-QVDVFIALTNE--------D--------ETNIM----SAMLAKRMGAK-KVMV 331 (461)
T ss_dssp HHHHHTTGG-GCSEEEECCSC--------H--------HHHHH----HHHHHHHTTCS-EEEE
T ss_pred hhHhhcCch-hhcEEEEcccC--------c--------HHHHH----HHHHHHHcCCc-cccc
Confidence 988766322 68999965431 1 35664 34567888988 5443
No 497
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=95.33 E-value=0.077 Score=58.42 Aligned_cols=123 Identities=12% Similarity=0.039 Sum_probs=71.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEecccccccccccC----CCCCCccchhhhhhhhhcccCC-CceeEE
Q 011706 84 SKAKRVMIIGGDGYCGWATALHLSNKGY-EVAIVDSLIRRLFDHQLG----LDSLTPIASIHDRLRCWKSLTG-KNIELY 157 (479)
Q Consensus 84 ~~~~~vLVtGatG~iG~~l~~~Ll~~G~-~V~~~dr~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~v~~v 157 (479)
+...+|||.|+ |++|..+++.|++.|. +++++|...=...+.... ...+. ........+.+.++.. -.+..+
T Consensus 25 L~~s~VlIvG~-GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG-~~Ka~a~~~~L~~lNP~v~v~~~ 102 (1015)
T 3cmm_A 25 MQTSNVLILGL-KGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIG-QKRGDVTRAKLAELNAYVPVNVL 102 (1015)
T ss_dssp HTTCEEEEECC-SHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTT-SBHHHHHHHHHTTSCTTSCEEEC
T ss_pred HhcCEEEEECC-ChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcC-hHHHHHHHHHHHHHCCCCeEEEe
Confidence 45679999997 9999999999999996 788887642111111000 00011 0111122223333322 245555
Q ss_pred EcccCChHHHHHHhhhcCCCEEEEcccccCcccccccccccchhhhhhHHHHHHHHHHHHHcCCcceEEEeeccccccC
Q 011706 158 IGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236 (479)
Q Consensus 158 ~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~g~~~~~V~~SS~~v~g~ 236 (479)
..+++. +.+. ++|+||.+.. .|...-..+.++|.+.+ ..||+.++.+.+|.
T Consensus 103 ~~~l~~-----~~l~--~~DvVv~~~d-------------------~~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~ 153 (1015)
T 3cmm_A 103 DSLDDV-----TQLS--QFQVVVATDT-------------------VSLEDKVKINEFCHSSG--IRFISSETRGLFGN 153 (1015)
T ss_dssp CCCCCS-----TTGG--GCSEEEECTT-------------------SCHHHHHHHHHHHHHHT--CEEEEEEEETTEEE
T ss_pred cCCCCH-----HHHh--cCCEEEEcCC-------------------CCHHHHHHHHHHHHHcC--CCEEEEEecccEEE
Confidence 555633 2455 6899996531 14445557778888887 36888777665553
No 498
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.25 E-value=0.02 Score=55.84 Aligned_cols=35 Identities=26% Similarity=0.241 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
.+.+|||+|+ |.+|...++.+...|++|+++++..
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~ 213 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS 213 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5789999999 9999999998888899999998654
No 499
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.24 E-value=0.03 Score=53.59 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=33.9
Q ss_pred CCCCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEeccc
Q 011706 82 DPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI 120 (479)
Q Consensus 82 ~~~~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~ 120 (479)
..+.+|+|.|+|- |-||+.+++.|...|++|+++++..
T Consensus 133 ~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~ 170 (324)
T 3evt_A 133 STLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTG 170 (324)
T ss_dssp CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCc
Confidence 3467999999986 9999999999999999999998754
No 500
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=95.24 E-value=0.046 Score=54.64 Aligned_cols=73 Identities=25% Similarity=0.386 Sum_probs=54.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEecccccccccccCCCCCCccchhhhhhhhhcccCCCceeEEEcccCCh
Q 011706 85 KAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDF 164 (479)
Q Consensus 85 ~~~~vLVtGatG~iG~~l~~~Ll~~G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 164 (479)
..|+|||+|+ |.+|..+++.|.+.|++|++++...... .. .+ .-..+..|..|.
T Consensus 18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~------------------~~-~~------ad~~~~~~~~d~ 71 (433)
T 2dwc_A 18 SAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAP------------------AM-QV------AHRSYVGNMMDK 71 (433)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCH------------------HH-HH------SSEEEESCTTCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh------------------hh-hh------cceEEECCCCCH
Confidence 3579999988 8899999999999999999998643210 00 00 113456788899
Q ss_pred HHHHHHhhhcCCCEEEEcc
Q 011706 165 EFLSESFKSFEPDAVVHFG 183 (479)
Q Consensus 165 ~~~~~~~~~~~~D~Vih~A 183 (479)
+.+.++.+..++|+|+...
T Consensus 72 ~~l~~~~~~~~~d~V~~~~ 90 (433)
T 2dwc_A 72 DFLWSVVEREKPDAIIPEI 90 (433)
T ss_dssp HHHHHHHHHHCCSEEEECS
T ss_pred HHHHHHHHHcCCCEEEECc
Confidence 8888888766899998754
Done!