Your job contains 1 sequence.
>011707
MAHLLSTSCSLNIPSCRKPSFQQLNQGLIGLPTSFTVKTSKSPIQTVILSAQRSQRCHTV
YATATPFTPTQSRSGLHQSSNDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI
RRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVV
HFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNID
IEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV
RTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV
ELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHYY
NAKHTKLIELGLQPHILSDSLLDSLLNFAIQFKDRVDSKQIMPSVSWRKIGTKPKTVAA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011707
(479 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123797 - symbol:SQD1 "sulfoquinovosyldiacylgl... 1828 1.4e-188 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 99 2.3e-07 3
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 99 3.3e-07 3
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 99 4.2e-07 3
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 99 4.2e-07 3
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 99 4.2e-07 3
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 99 4.2e-07 3
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 99 4.3e-07 3
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 99 5.3e-07 3
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 94 1.4e-06 3
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 105 3.2e-06 3
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 86 1.1e-05 3
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 105 1.8e-05 2
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 114 3.0e-05 2
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 115 3.8e-05 2
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 109 4.2e-05 2
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 111 4.7e-05 2
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 80 4.9e-05 3
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 99 5.9e-05 2
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 107 0.00010 2
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 110 0.00010 2
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 106 0.00019 2
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 87 0.00021 3
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 120 0.00024 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 107 0.00024 2
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 110 0.00027 2
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 90 0.00027 2
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 95 0.00031 2
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 112 0.00032 2
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 89 0.00033 2
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 106 0.00048 2
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 113 0.00052 2
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 84 0.00056 4
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 86 0.00058 2
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 106 0.00059 2
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 109 0.00088 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 109 0.00090 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 105 0.00095 2
>TAIR|locus:2123797 [details] [associations]
symbol:SQD1 "sulfoquinovosyldiacylglycerol 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0008146 "sulfotransferase
activity" evidence=IDA] [GO:0009247 "glycolipid biosynthetic
process" evidence=IDA] [GO:0046506 "sulfolipid biosynthetic
process" evidence=IDA] [GO:0046507 "UDPsulfoquinovose synthase
activity" evidence=IDA] [GO:0016036 "cellular response to phosphate
starvation" evidence=IEP;IMP;RCA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0008270 GO:GO:0009247 GO:GO:0016036 EMBL:AL031804
EMBL:AL161582 GO:GO:0008146 EMBL:AF022082 EMBL:AF380641
EMBL:AY113071 IPI:IPI00524549 PIR:T05311 RefSeq:NP_195029.1
UniGene:At.2479 PDB:1I24 PDB:1I2B PDB:1I2C PDB:1QRR PDBsum:1I24
PDBsum:1I2B PDBsum:1I2C PDBsum:1QRR ProteinModelPortal:O48917
SMR:O48917 IntAct:O48917 STRING:O48917 PaxDb:O48917 PRIDE:O48917
ProMEX:O48917 EnsemblPlants:AT4G33030.1 GeneID:829440
KEGG:ath:AT4G33030 TAIR:At4g33030 HOGENOM:HOG000014371
InParanoid:O48917 KO:K06118 OMA:QMTETHR PhylomeDB:O48917
ProtClustDB:PLN02572 BioCyc:MetaCyc:MONOMER-1201
EvolutionaryTrace:O48917 Genevestigator:O48917 GermOnline:AT4G33030
GO:GO:0046507 Uniprot:O48917
Length = 477
Score = 1828 (648.5 bits), Expect = 1.4e-188, P = 1.4e-188
Identities = 350/478 (73%), Positives = 393/478 (82%)
Query: 1 MAHLLSTSCSLNIPSCRKPSFQQLNQGLIGLPTSFTVKT-SKSPIQTVILSAQRSQRCHT 59
MAHLLS SC ++ S S + + + T F + S+S ++ ++ ++ ++
Sbjct: 1 MAHLLSASCP-SVISLSSSSSKNSVKPFVSGQTFFNAQLLSRSSLKGLLFQEKKPRKSCV 59
Query: 60 VYATATPFTPTQSRSGLHQSSNDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSL 119
ATA P T Q ++N SK KRVM+IGGDGYCGWATALHLS K YEV IVD+L
Sbjct: 60 FRATAVPIT--QQAPPETSTNNSSSKPKRVMVIGGDGYCGWATALHLSKKNYEVCIVDNL 117
Query: 120 IRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAV 179
+RRLFDHQLGL+SLTPIASIHDR+ WK+LTGK+IELY+GDICD PD+V
Sbjct: 118 VRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSV 177
Query: 180 VHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI 239
VHFGEQRSAPYSMIDRSRAV+TQHNNVIGTLNVLFA+KEF +ECHLVKLGTMGEYGTPNI
Sbjct: 178 VHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI 237
Query: 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 299
DIEEGYITI HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG
Sbjct: 238 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 297
Query: 300 VRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQC 359
V+TDET MHEEL NRLDYD VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQC
Sbjct: 298 VKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQC 357
Query: 360 VELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHY 419
VE+AIANPA+ GEFRVFNQFTEQFSVN+LA+LVTKAG KLGLDVK ++VPNPRVEAEEHY
Sbjct: 358 VEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHY 417
Query: 420 YNAKHTKLIELGLQPHIXXXXXXXXXXNFAIQFKDRVDSKQIMPSVSWRKIGTKPKTV 477
YNAKHTKL+ELGL+PH NFA+QFKDRVD+KQIMPSVSW+KIG K K++
Sbjct: 418 YNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSM 475
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 99 (39.9 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 214 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 269
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ G G +++ +S + + ++ + K KL+ LG +P
Sbjct: 270 EEHTILEFAQLIKNLVGS--GSEIQFLS--EAQDDPQKRKPDIKKAKLM-LGWEP 319
Score = 69 (29.3 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 32 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 87
Score = 62 (26.9 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 97 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 151
Query: 237 PNI 239
P +
Sbjct: 152 PEV 154
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 99 (39.9 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 248 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 303
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ G G +++ +S + + ++ + K KL+ LG +P
Sbjct: 304 EEHTILEFAQLIKNLVGS--GSEIQFLS--EAQDDPQKRKPDIKKAKLM-LGWEP 353
Score = 69 (29.3 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 66 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 121
Score = 62 (26.9 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 131 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 185
Query: 237 PNI 239
P +
Sbjct: 186 PEV 188
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 99 (39.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 271 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 326
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ G G +++ +S + + ++ + K KL+ LG +P
Sbjct: 327 EEHTILEFAQLIKNLVGS--GSEIQFLS--EAQDDPQKRKPDIKKAKLM-LGWEP 376
Score = 69 (29.3 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 144
Score = 62 (26.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 208
Query: 237 PNI 239
P +
Sbjct: 209 PEV 211
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 99 (39.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 271 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 326
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ G G +++ +S + + ++ + K KL+ LG +P
Sbjct: 327 EEHTILEFAQLIKNLVGS--GSEIQFLS--EAQDDPQKRKPDIKKAKLM-LGWEP 376
Score = 69 (29.3 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 144
Score = 62 (26.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 208
Query: 237 PNI 239
P +
Sbjct: 209 PEV 211
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 99 (39.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 271 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 326
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ G G +++ +S + + ++ + K KL+ LG +P
Sbjct: 327 EEHTILEFAQLIKNLVGS--GSEIQFLS--EAQDDPQKRKPDIKKAKLM-LGWEP 376
Score = 69 (29.3 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 144
Score = 62 (26.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 208
Query: 237 PNI 239
P +
Sbjct: 209 PEV 211
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 99 (39.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 271 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 326
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ G G +++ +S + + ++ + K KL+ LG +P
Sbjct: 327 EEHTILEFAQLIKNLVGS--GSEIQFLS--EAQDDPQKRKPDIKKAKLM-LGWEP 376
Score = 69 (29.3 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 144
Score = 62 (26.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 208
Query: 237 PNI 239
P +
Sbjct: 209 PEV 211
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 99 (39.9 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 272 GRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 327
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ K G G +++ +S + + ++ + + KL+ LG +P
Sbjct: 328 EEHTILEFAQLIKKLVGS--GSEIQFLS--EAQDDPQKRKPDIRKAKLL-LGWEP 377
Score = 69 (29.3 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 90 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 145
Score = 62 (26.9 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 155 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 209
Query: 237 PNI 239
P +
Sbjct: 210 PEV 212
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 99 (39.9 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P + N
Sbjct: 271 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLGNP-- 326
Query: 381 EQFSVNQLAALVTK-AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
E+ ++ + A L+ G G +++ +S + + ++ + K KL+ LG +P
Sbjct: 327 EEHTILEFAQLIKNLVGS--GSEIQFLS--EAQDDPQKRKPDIKKAKLM-LGWEP 376
Score = 68 (29.0 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR+++ GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 89 KRILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 144
Score = 62 (26.9 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 154 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 208
Query: 237 PNI 239
P +
Sbjct: 209 PEV 211
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 94 (38.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
G ++ F +QA G PLTVYG G QTR + + D V V L +N + P
Sbjct: 265 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP 314
Score = 69 (29.3 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 83 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 138
Score = 62 (26.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 148 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 202
Query: 237 PNI 239
P +
Sbjct: 203 PEV 205
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 105 (42.0 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 47/177 (26%), Positives = 76/177 (42%)
Query: 128 LGLDSLTPIASIHDRLRCWKSLTGKNIELYI-GDICDXXXXXXXXXXXXPDAVVHFGEQR 186
+ LD+LT + L SL G +++ GDI D PDAV++F +
Sbjct: 29 VNLDALTYAGN----LNTLASLEGNADHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAE- 83
Query: 187 SAPYSMIDRS---RAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEE 243
S +DRS F Q NV+GTL +L A++++ + + + ++ +E
Sbjct: 84 ----SHVDRSIEGPGAFIQ-TNVVGTLALLEAVRDYWKALPDTRRDA---FRFLHVSTDE 135
Query: 244 GYITINHNGR-TDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 299
Y T+ G+ T+T PY +S Y SK H + +G+ N YG
Sbjct: 136 VYGTLGETGKFTETTPYAP--NSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYG 190
Score = 68 (29.0 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 331 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGE 372
+A G PL VYG G Q R +L + D + + +A + GE
Sbjct: 205 KALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK-GRVGE 245
Score = 44 (20.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 90 MIIGGDGYCGWATALHLSNKGYEVAIVDSL 119
++ GG G+ G L ++G V +D+L
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDAL 34
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 86 (35.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
G ++ F +QA G LTVYG G QTR + + D V V L +N + P
Sbjct: 269 GRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSP 318
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L G+EV +VD+ +R +H +G ++ I HD
Sbjct: 87 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN--HD 142
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P M + + + T N IGTLN+L K R L+ T YG
Sbjct: 152 DQIYHLASPASPPNYMYNPIKTLKT---NTIGTLNMLGLAK--RVGARLLLASTSEVYGD 206
Query: 237 PNI 239
P +
Sbjct: 207 PEV 209
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 105 (42.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 47/177 (26%), Positives = 76/177 (42%)
Query: 128 LGLDSLTPIASIHDRLRCWKSLTGKNIELYI-GDICDXXXXXXXXXXXXPDAVVHFGEQR 186
+ LD+LT + L SL G +++ GDI D PDAV++F +
Sbjct: 29 VNLDALTYAGN----LNTLASLEGNADHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAE- 83
Query: 187 SAPYSMIDRS---RAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEE 243
S +DRS F Q NV+GTL +L A++++ + + + ++ +E
Sbjct: 84 ----SHVDRSIEGPGAFIQ-TNVVGTLALLEAVRDYWKALPDTRRDA---FRFLHVSTDE 135
Query: 244 GYITINHNGR-TDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 299
Y T+ G+ T+T PY +S Y SK H + +G+ N YG
Sbjct: 136 VYGTLGETGKFTETTPYAP--NSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYG 190
Score = 68 (29.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 331 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGE 372
+A G PL VYG G Q R +L + D + + +A + GE
Sbjct: 205 KALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK-GRVGE 245
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 114 (45.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 42/163 (25%), Positives = 75/163 (46%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ H +++ +S+ + LR
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNF------H----NAIRGGSSMPESLRR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQELTGRSVEFEEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
+ GT+ +L MK + +LV + YG P + ++E + T
Sbjct: 109 LTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT 150
Score = 56 (24.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 28/102 (27%), Positives = 44/102 (43%)
Query: 308 HEELCNRLDYDGVFGTALNRFCVQAAVGH--PLTVYGKGGQTRGYLDIRDTVQCVELAIA 365
H C D G+ L + Q A+G L V+G T +RD + V+LA
Sbjct: 192 HASGCIGEDPQGIPNN-LMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKG 250
Query: 366 NPAQPGEF------RVFNQFTEQ-FSVNQLAALVTKA-GEKL 399
+ A + R++N T +SV Q+ + KA G+K+
Sbjct: 251 HIAALRKLKEQCGCRIYNLGTGTGYSVLQMVRAMEKASGKKI 292
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 115 (45.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 46/162 (28%), Positives = 64/162 (39%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
V++ GG GY G T L + N GY V VD+L + G A + + L +
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNA---YSSG-------AKLPEALSRVQE 55
Query: 149 LTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
+TGK + Y DI D D V HF ++ S R + HNN+ G
Sbjct: 56 ITGKKVNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESC--RIPLQY-YHNNMTG 112
Query: 209 TLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYITIN 249
T NVL V + YG P + + E + T N
Sbjct: 113 T-NVLLEAMADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGN 153
Score = 54 (24.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 328 FCVQAAVGH-P-LTVYGKGGQTRGYLDIRDTVQCVELA 363
+ Q AVG P L+VYG T +RD + V+LA
Sbjct: 212 YIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLA 249
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 109 (43.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 42/163 (25%), Positives = 73/163 (44%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ H ++ S+ + LR
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF------H----NAFRGGGSLPESLRR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
+ GT+ +L MK + +LV + YG P + ++E + T
Sbjct: 109 LTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT 150
Score = 60 (26.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 29/105 (27%), Positives = 45/105 (42%)
Query: 305 TAMHEELCNRLDYDGVFGTALNRFCVQAAVGH--PLTVYGKGGQTRGYLDIRDTVQCVEL 362
T H C D G+ L + Q A+G L V+G T +RD + V+L
Sbjct: 189 TGAHASGCIGEDPQGIPNN-LMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL 247
Query: 363 AIANPAQPGEF------RVFNQFTEQ-FSVNQLAALVTKA-GEKL 399
A + A + R++N T +SV Q+ + KA G+K+
Sbjct: 248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 111 (44.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 50/188 (26%), Positives = 75/188 (39%)
Query: 114 AIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDXXXXXXXXXX 173
A+V +IR D + LD LT ++ + L E DICD
Sbjct: 16 AVVRHIIRNTQDSVVNLDKLTYAGNL-ESLTDIADNPRYAFEQV--DICDRAELDRVFAQ 72
Query: 174 XXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGE 233
PDAV+H + S+ S F Q N++GT N+L A + +RQ+ K
Sbjct: 73 HRPDAVMHLAAESHVDRSI--GSAGEFIQ-TNIVGTFNLLEAARAYRQQMPSEKHEAFRF 129
Query: 234 YGTPNIDIEEGYITINHNGR--TDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATD 291
+ +I +E Y ++ T+T PY SS Y SK H + + +G+
Sbjct: 130 H---HISTDEVYGDLSGTDDLFTETAPYAP--SSPYSASKASSDHLVRAWLRTYGLPTIV 184
Query: 292 LNQGVVYG 299
N YG
Sbjct: 185 TNCSNNYG 192
Score = 57 (25.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 30/113 (26%), Positives = 47/113 (41%)
Query: 330 VQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRV--FNQFTEQFSVNQ 387
+ A G PL VYG G Q R +L + D + + + + + N+ V
Sbjct: 206 LNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKT 265
Query: 388 LAALVTK-AGEK-LGL----DVKTISVPNPRVEAEEHYYNAKHTKLIELGLQP 434
+ AL+ + A EK G+ D+ T P +A AK + +LG QP
Sbjct: 266 ICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRR--DLGWQP 316
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 80 (33.2 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA +TVYG G QTR + + D V + L +N QP + N
Sbjct: 298 GRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQP--VNLGNP-V 354
Query: 381 EQFSVNQLAALVTK 394
EQ ++ + A ++ K
Sbjct: 355 EQ-TIGEFAEIIKK 367
Score = 71 (30.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHD 141
KR++I GG G+ G L +G+EV +VD+ +R +H LG ++ I HD
Sbjct: 116 KRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIH--HD 171
Score = 61 (26.5 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P+ M + + + T N +GT+NVL K R ++ T YG
Sbjct: 181 DEIYHLASPASPPHYMYNPVKTIKT---NTMGTINVLGLAK--RVMAKVLIASTSEVYGD 235
Query: 237 PNI 239
P +
Sbjct: 236 PTV 238
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 99 (39.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 48/189 (25%), Positives = 75/189 (39%)
Query: 114 AIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDXXXXXXXXXX 173
A++ +I D + +D LT A+ LR ++ E DICD
Sbjct: 16 ALIRYIINHTQDFVINIDKLTYAAN-QSALREVENNPRYVFEKV--DICDLNVIENIFEK 72
Query: 174 XXPDAVVHFGEQRSAPYSMIDRS---RAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGT 230
PDAV+H + S +DRS A F Q N++GT +L K + K T
Sbjct: 73 YQPDAVMHLAAE-----SHVDRSISGAADFVQ-TNIVGTYTLLEVAKNYWHTLDEAKKTT 126
Query: 231 MGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRAT 290
+ + D G ++++ T+ PY SS Y SK +H + + +G+
Sbjct: 127 F-RFHHISTDEVYGDLSLSEPAFTEQSPY--HPSSPYSASKAASNHLVQAWHRTYGLPVI 183
Query: 291 DLNQGVVYG 299
N YG
Sbjct: 184 ITNSSNNYG 192
Score = 69 (29.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 332 AAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGE 372
A +G PL +YG G Q R +L + D VQ L + + GE
Sbjct: 208 AVMGKPLPIYGDGQQIRDWLFVEDHVQASYLVLTK-GRVGE 247
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 107 (42.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 130 LDSLTPIASIH--DRLRCWKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRS 187
LD+L+ +SI DR+ + +TGK++ Y GDI + DAV+HF ++
Sbjct: 30 LDNLSN-SSIEALDRV---ERITGKSVTFYQGDILNKALLQKVFSDHSIDAVIHFAGLKA 85
Query: 188 APYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTP-NIDIEEGYI 246
S+ ++ + NNV GTL + M EF+ + +LV + YG P ++ I E +
Sbjct: 86 VGESV---AKPLKYYENNVTGTLILCQVMAEFKVK-NLVFSSSATVYGDPASLPITEDFP 141
Query: 247 TINHNGRTDTLPYPKQASSFYH-LSKVHDS 275
T G T+ PY + H L+ +H S
Sbjct: 142 T----GATN--PYGQSKLMVEHILADLHHS 165
Score = 58 (25.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 29/109 (26%), Positives = 43/109 (39%)
Query: 328 FCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIAN-------PAQPGEFRVFNQ 378
F Q AVG L+V+G T +RD + V+LAI + +PG +N
Sbjct: 202 FIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVDLAIGHLKALEKLATKPG-LVTYNL 260
Query: 379 FTEQ-FSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHYYNAKHTK 426
T Q +SV + KA G + + P + Y + H K
Sbjct: 261 GTGQGYSVLDMVKAFEKA---CGKSIAYLIAPRRPGDIAACYADPDHAK 306
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 110 (43.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ H +++ S+ + LR
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYSPMVIDNF------H----NAIRGGGSMPESLRR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQDLTGRSVEFEEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
+ GT+ +L M+ + +LV + YG P + ++E + T
Sbjct: 109 LTGTIQLLEIMRAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT 150
Score = 55 (24.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/102 (27%), Positives = 44/102 (43%)
Query: 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHP--LTVYGKGGQTRGYLDIRDTVQCVELAIA 365
H C D G+ L + Q A+G L V+G T +RD + V+LA
Sbjct: 192 HASGCIGEDPQGIPNN-LMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIHVVDLAKG 250
Query: 366 NPAQPGEF------RVFNQFTEQ-FSVNQLAALVTKA-GEKL 399
+ A + R++N T +SV Q+ + KA G+K+
Sbjct: 251 HIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/133 (25%), Positives = 59/133 (44%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A+ V++ GG GY G T L L GY V +VD+L + L + +A+ H
Sbjct: 3 ARNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDN---SSAVSLQRVKKLAAEH----- 54
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
G+ + + D+ D DAV+HF ++ S+ + + +NN
Sbjct: 55 -----GERLSFHQVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESV---EKPLLYYNNN 106
Query: 206 VIGTLNVLFAMKE 218
++GT+ +L M +
Sbjct: 107 LVGTITLLEVMAQ 119
Score = 57 (25.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 328 FCVQAAVGH-P-LTVYGKGGQTRGYLDIRDTVQCVELA 363
F Q AVG P LTV+G T+ +RD + ++LA
Sbjct: 208 FVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVIDLA 245
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 87 (35.7 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQPGEFRVFNQFT 380
G ++ F +QA P+T+YG G QTR + + D V ++L +N + P + N
Sbjct: 319 GRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYSLP--VNIGNP-- 374
Query: 381 EQFSVNQLAALV 392
E+ ++ Q A ++
Sbjct: 375 EEHTIGQFATII 386
Score = 62 (26.9 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 177 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGT 236
D + H S P+ M + + + T N +GT+N+L K R + ++ T YG
Sbjct: 202 DQIYHLASPASPPHYMYNPVKTIKT---NTLGTINMLGLAK--RVKATVLLASTSEVYGD 256
Query: 237 PNI 239
P +
Sbjct: 257 PEV 259
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 66 PFTPTQSRSGLHQSSNDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RR 122
P T+S + N+ ++ KR++I GG G+ G L G+EV +D+ ++
Sbjct: 118 PLPTTKSFPSVRYR-NEETR-KRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKK 175
Query: 123 LFDHQLG 129
+H +G
Sbjct: 176 NVEHWIG 182
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 46/176 (26%), Positives = 85/176 (48%)
Query: 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRL 143
S + +++ GG G+ G T + L N+G++V I+D+L D+ + + ++H R+
Sbjct: 4 SVEQNILVTGGAGFIGTHTVVQLLNQGFKVTIIDNL-----DNSV-------VEAVH-RV 50
Query: 144 R--CWKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFT 201
R L+ K +E +GD+ + DAV+HF ++ S + R F
Sbjct: 51 RELVGPDLSTK-LEFNLGDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGES-VGNPRRYFD 108
Query: 202 QHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNID--IEEGYI-TINHNGRT 254
NN++GT+N+ M ++ + +V + YG P I +E+ + +N GRT
Sbjct: 109 --NNLVGTINLYETMAKYNCKM-MVFSSSATVYGQPEIVPCVEDFELQAMNPYGRT 161
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 53/215 (24%), Positives = 89/215 (41%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
+++++ GG G+ G A H+ + A+V+ + +L + L+SLT +A D R
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVN--VDKL-TYAGNLESLTEVA---DNPR-- 52
Query: 147 KSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNV 206
+ + DICD PDAV+H + S+ S F Q N+
Sbjct: 53 --YAFEQV-----DICDRAELDRVFAQYRPDAVMHLAAESHVDRSI--GSAGEFIQ-TNI 102
Query: 207 IGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGR--TDTLPYPKQAS 264
+GT N+L A + + Q+ + + +I +E Y + T+T PY S
Sbjct: 103 VGTFNLLEAARAYWQQ---MPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAP--S 157
Query: 265 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 299
S Y SK H + + +G+ N YG
Sbjct: 158 SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYG 192
Score = 55 (24.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 330 VQAAVGHPLTVYGKGGQTRGYLDIRD 355
+ A G PL VYG G Q R +L + D
Sbjct: 206 LNALDGKPLPVYGDGMQIRDWLFVED 231
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 110 (43.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 43/163 (26%), Positives = 74/163 (45%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQL-GLDSLTPIASIHDRLRC 145
++V++ GG GY G T L L GY ++D+ F + + G DS+ P + LR
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDN-----FHNSIRGEDSM-P-----ESLRR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQELTGRSVEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
+ GT+ +L M+ + LV + YG P + ++E + T
Sbjct: 109 LTGTIQLLEIMRAHGVKS-LVFSSSATVYGNPQYLPLDEAHPT 150
Score = 51 (23.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 331 QAAVGH--PLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF------RVFNQFTEQ 382
Q A+G L V+G T +RD + V+LA + A + R++N T
Sbjct: 214 QVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGT 273
Query: 383 -FSVNQLAALVTKA-GEKL 399
+SV Q+ + KA G+K+
Sbjct: 274 GYSVLQMVQAMEKASGKKI 292
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 90 (36.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 45/153 (29%), Positives = 66/153 (43%)
Query: 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRL 143
S AKRV++ GG G+ A H+ V++V+ + + LD L AS L
Sbjct: 15 SFAKRVLVTGGAGFI----ASHVI-----VSLVEDYPNYMI---VNLDKLDYCAS----L 58
Query: 144 RCWKSLTGK-NIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQ 202
+ ++++ K N + GDICD D V+HF Q S + RA
Sbjct: 59 KNLETISDKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFV---RAFEFT 115
Query: 203 HNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYG 235
+ NV GT +L A E R E + + T YG
Sbjct: 116 YVNVYGTHVLLSAAHEARVE-KFIYVSTDEVYG 147
Score = 73 (30.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 340 VYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE-QFSVNQLAA-LVTKAGE 397
++G G QTR +L D V+ L + +PGE ++N T + SV QLA L+ E
Sbjct: 222 IHGSGLQTRNFLYATDVVEAF-LTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKE 278
Query: 398 -KLGLDVKT-ISVPNPRVEAEEHYYNAKHTKLIELGLQPHI 436
K +++ + N R + Y K K+ LG +P +
Sbjct: 279 TKSESEMENWVDYVNDR-PTNDMRYPMKSEKIHGLGWRPKV 318
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 95 (38.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 72 SRSGLHQSSNDP-SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGL 130
S +G +S P S AKRV++ GG G+ A H+ V++V+ + + L
Sbjct: 2 SVAGRAESLGPPDSFAKRVLVTGGAGFI----ASHMI-----VSLVEDYPNYMI---INL 49
Query: 131 DSLTPIASIHDRLRCWKSLTGK-NIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAP 189
D L AS L+ ++++ K N + GDICD D V+HF Q
Sbjct: 50 DKLDYCAS----LKNLETISNKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVD 105
Query: 190 YSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYG 235
S + RA + NV GT ++ A E R E + + T YG
Sbjct: 106 LSFV---RAFEFTYVNVYGTHVLVSAAHEARVE-KFIYVSTDEVYG 147
Score = 67 (28.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 340 VYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE-QFSVNQLAA----LVTK 394
++G G QTR +L D V+ L + +PGE ++N T + SV QLA L+ +
Sbjct: 222 IHGTGLQTRNFLYATDVVEAF-LTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKE 278
Query: 395 AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHI 436
+ ++ + + R + Y K K+ LG +P +
Sbjct: 279 TNSESEME-NWVDYVDDR-PTNDMRYPMKSEKIHGLGWRPKV 318
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 112 (44.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
++V++ GG GY G T L L GY ++D+ + G DS+ P + LR
Sbjct: 2 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAI----RGEDSM-P-----ESLRRV 51
Query: 147 KSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNV 206
+ LTG+++E DI D AV+HF ++ S+ + + N+
Sbjct: 52 QELTGRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESV---QKPLDYYRVNL 108
Query: 207 IGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
GT+ +L M+ + +LV + YG P + ++E + T
Sbjct: 109 TGTIQLLEIMRAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT 149
Score = 48 (22.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 331 QAAVGH--PLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF------RVFNQFTEQ 382
Q A+G L V+G T +RD + V+LA + A + R +N T
Sbjct: 213 QVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGT 272
Query: 383 -FSVNQLAALVTKA-GEKL 399
+SV Q+ + KA G+K+
Sbjct: 273 GYSVLQMVQAMEKASGKKI 291
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 89 (36.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 43/151 (28%), Positives = 65/151 (43%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
AKRV++ GG G+ A H+ V++V+ + + LD L AS L+
Sbjct: 17 AKRVLVTGGAGFI----ASHMI-----VSLVEDYPNYMI---INLDKLDYCAS----LKN 60
Query: 146 WKSLTGK-NIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHN 204
++++ K N + GDICD D V+HF Q S + RA +
Sbjct: 61 LETISNKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFV---RAFEFTYV 117
Query: 205 NVIGTLNVLFAMKEFRQECHLVKLGTMGEYG 235
NV GT ++ A E R E + + T YG
Sbjct: 118 NVYGTHVLVSAAHEARVE-KFIYVSTDEVYG 147
Score = 73 (30.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 340 VYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE-QFSVNQLAA----LVTK 394
++G G QTR +L D V+ L + +PGE ++N T + SV QLA L+ +
Sbjct: 222 IHGSGLQTRNFLYATDVVEAF-LTVLKKGKPGE--IYNIGTNFEMSVVQLAKELIQLIKE 278
Query: 395 AGEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIELGLQPHI 436
+ ++ + N R + Y K K+ LG +P +
Sbjct: 279 TNSESEME-NWVDYVNDR-PTNDMRYPMKSEKIHGLGWRPKV 318
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 106 (42.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 34/134 (25%), Positives = 60/134 (44%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
AK V++ GG GY G T L L GY +VD+ +D+ + AS+ R++
Sbjct: 2 AKSVLVTGGAGYIGSHTVLQLLEGGYSAVVVDN-----YDN-------SSAASLQ-RVKK 48
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
G + + D+ D DAV+HF ++ S+ + + +NN
Sbjct: 49 LAGENGNRLSFHQVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESV---EKPLLYYNNN 105
Query: 206 VIGTLNVLFAMKEF 219
++GT+ +L M ++
Sbjct: 106 IVGTVTLLEVMAQY 119
Score = 53 (23.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 331 QAAVGH-P-LTVYGKGGQTRGYLDIRDTVQCVELA---IANPAQPGEFR----VFNQFTE 381
Q AVG P LTV+G +T+ +RD + ++LA IA + + + V+N T
Sbjct: 210 QVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTG 269
Query: 382 Q-FSVNQLAALVTKA-GEKLGL 401
SV ++ A KA G+K+ L
Sbjct: 270 NGTSVLEMVAAFEKASGKKIPL 291
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 113 (44.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 46/178 (25%), Positives = 83/178 (46%)
Query: 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRL 143
S + +++ GG G+ G T + L G++V+I+D+ FD+ + I ++ DR+
Sbjct: 4 SVEQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDN-----FDNSV-------IEAV-DRV 50
Query: 144 RCWKSLTG----KNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAV 199
R L G K ++ +GD+ + DAV+HF ++ S ++ R
Sbjct: 51 R---ELVGPDLSKKLDFNLGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGES-VENPRRY 106
Query: 200 FTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYI--TINHNGRT 254
F NN++GT+N+ M ++ + +V + YG P I E + +N GRT
Sbjct: 107 FD--NNLVGTINLYETMAKYNCKM-MVFSSSATVYGQPEKIPCMEDFELKAMNPYGRT 161
Score = 45 (20.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 331 QAAVGH-P-LTVYGKGGQTRGYLDIRDTVQCVELA 363
Q AVG P L VYG T +RD + ++LA
Sbjct: 215 QVAVGRLPELNVYGHDYPTEDGSAVRDYIHVMDLA 249
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 84 (34.6 bits), Expect = 0.00056, Sum P(4) = 0.00056
Identities = 42/174 (24%), Positives = 75/174 (43%)
Query: 130 LDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAP 189
LD L ++I++ L C L N + Y G+I D D V+H A
Sbjct: 41 LDKLDYCSNINN-LGC--VLKELNFKFYKGNILDSELLENIFEKEKIDIVIHL-----AA 92
Query: 190 YSMIDRS--RAV-FTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI-DIEEGY 245
Y+ +D S +++ FT+ NN++GT +L K ++ + + + T YG+ I D ++
Sbjct: 93 YTHVDNSFKQSIKFTE-NNILGTHYLLETCKNYKLK-KFIYVSTDEVYGSGLIEDNDDNN 150
Query: 246 ITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 299
+IN + ++ P Y SK H + K++ + +YG
Sbjct: 151 NSINQSSNEKSILNPTNP---YSASKAGAEHLVQSYYKSFKLPVIITRANNIYG 201
Score = 58 (25.5 bits), Expect = 0.00056, Sum P(4) = 0.00056
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 339 TVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF-RVFNQFTEQFSVNQL 388
T++G G TR YL I D V ++ + + GE V+N T+ F ++ L
Sbjct: 224 TIHGTGKNTRNYLYIDDIVSAFDIIL----RKGEIGNVYNIGTD-FEISNL 269
Score = 52 (23.4 bits), Expect = 0.00056, Sum P(4) = 0.00056
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 79 SSNDPSKAKRVMIIGGDGYCGWATALHLSNK--GYEVAIVDSL 119
++ D ++++I GG G+ G A++L+ K ++ ++D L
Sbjct: 2 NNKDDLFIQKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKL 44
Score = 41 (19.5 bits), Expect = 0.00056, Sum P(4) = 0.00056
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 417 EHYYNAKHTKLIELGLQPHI 436
+H YN ++KL LG + I
Sbjct: 330 DHRYNINYSKLSNLGWKKSI 349
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 86 (35.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 45/166 (27%), Positives = 71/166 (42%)
Query: 72 SRSGLHQSSNDPSK-AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGL 130
S +G + PS AKR+++ GG G+ A H+ V++V+ + + L
Sbjct: 2 SSAGRAEPLGPPSSFAKRLLVTGGAGFI----ASHVI-----VSLVEDYPNYMI---INL 49
Query: 131 DSLTPIASIHDRLRCWKSLTGK-NIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAP 189
D L AS L+ ++++ K N + GDIC+ D V+HF Q
Sbjct: 50 DKLDYCAS----LKNLETISNKQNYKFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVD 105
Query: 190 YSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYG 235
S + RA + NV GT ++ A E R E + + T YG
Sbjct: 106 LSFV---RAFEFTYVNVYGTHVLVSAAHEARVE-KFIYVSTDEVYG 147
Score = 74 (31.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 340 VYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVFNQFTE-QFSVNQLAA-LVTKAGE 397
++G G QTR +L D V+ L + +PGE ++N T + SV QLA L+ E
Sbjct: 222 IHGSGLQTRNFLYATDVVEAF-LTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKE 278
Query: 398 KLG-LDVKT-ISVPNPRVEAEEHYYNAKHTKLIELGLQPHI 436
+++T + N R + Y K K+ LG +P +
Sbjct: 279 TSSESEMETWVDYVNDR-PTNDMRYPMKSEKIQGLGWRPKV 318
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 106 (42.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 39/163 (23%), Positives = 74/163 (45%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ H +++ S+ + L+
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNF------H----NAIRGKGSMPESLQR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQELTGRSVEFEEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
+ G++ +L M+ + +LV + YG P + ++E + T
Sbjct: 109 LTGSIQLLEIMRAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT 150
Score = 52 (23.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 27/102 (26%), Positives = 44/102 (43%)
Query: 308 HEELCNRLDYDGVFGTALNRFCVQAAVGHP--LTVYGKGGQTRGYLDIRDTVQCVELAIA 365
H C D G+ L + Q A+G L V+G T +RD + V+LA
Sbjct: 192 HASGCIGEDPQGIPNN-LMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIHVVDLAKG 250
Query: 366 NPAQPGEF------RVFNQFTEQ-FSVNQLAALVTKA-GEKL 399
+ A + R++N T +SV Q+ + KA G+++
Sbjct: 251 HIAALRKLKEQCGCRIYNLGTGTGYSVLQMVEAMKKASGQEI 292
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 109 (43.4 bits), Expect = 0.00089, P = 0.00088
Identities = 42/163 (25%), Positives = 73/163 (44%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ H ++ S+ + LR
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF------H----NAFRGGGSLPESLRR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
+ GT+ +L MK + +LV + YG P + ++E + T
Sbjct: 109 LTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT 150
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 109 (43.4 bits), Expect = 0.00090, P = 0.00090
Identities = 42/163 (25%), Positives = 73/163 (44%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ H ++ S+ + LR
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF------H----NAFRGGGSLPESLRR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYIT 247
+ GT+ +L MK + +LV + YG P + ++E + T
Sbjct: 109 LTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT 150
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 105 (42.0 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 41/152 (26%), Positives = 68/152 (44%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQL-GLDSLTPIASIHDRLRC 145
++V++ GG GY G T L L GY ++D+ F + + G DS+ P + LR
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDN-----FHNSIRGEDSM-P-----ESLRR 51
Query: 146 WKSLTGKNIELYIGDICDXXXXXXXXXXXXPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
+ LTG+++E DI D AV+HF ++ S+ + + N
Sbjct: 52 VQELTGRSVEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESV---QKPLDYYRVN 108
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTP 237
+ GT+ +L M+ + LV + YG P
Sbjct: 109 LTGTIQLLEIMRAMGVKS-LVFSSSATVYGKP 139
Score = 51 (23.0 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 331 QAAVGH--PLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF------RVFNQFTEQ 382
Q A+G L V+G T +RD + V+LA + A + R++N T
Sbjct: 213 QVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGT 272
Query: 383 -FSVNQLAALVTKA-GEKL 399
+SV Q+ + KA G+K+
Sbjct: 273 GYSVLQMVQAMEKASGKKI 291
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 479 457 0.00094 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 618 (66 KB)
Total size of DFA: 286 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.75u 0.16s 33.91t Elapsed: 00:00:01
Total cpu time: 33.76u 0.16s 33.92t Elapsed: 00:00:02
Start: Sat May 11 08:28:10 2013 End: Sat May 11 08:28:12 2013