BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011707
(479 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84KI6|SQD1_SPIOL UDP-sulfoquinovose synthase, chloroplastic OS=Spinacia oleracea
GN=SQD1 PE=1 SV=1
Length = 482
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/482 (77%), Positives = 419/482 (86%), Gaps = 3/482 (0%)
Query: 1 MAHLLSTSCSLNIPSCRKPSFQQLNQGLIGLPTSFTVKTSKSPIQTVILSAQRSQRCHTV 60
MAHLLSTSCS+ + K S + N G P SFT +TSKS ++++ +Q+ V
Sbjct: 1 MAHLLSTSCSMKVSPSEKLSSKCWNIGSTKYPMSFTQQTSKSAFKSLVHQRNNTQKLTVV 60
Query: 61 YATATPF---TPTQSRSGLHQSSNDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVD 117
AT P T +S + +++ + S KRVM+IGGDGYCGWATALHLS K Y+V IVD
Sbjct: 61 RATTVPLNQETKAESGTSSFENNGNTSGRKRVMVIGGDGYCGWATALHLSKKNYDVCIVD 120
Query: 118 SLIRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEFLSESFKSFEPD 177
+L+RRLFDHQLGLDSLTPIASI +R+R W+ LTGK I+L++GDICDFEFL+E+FKSFEPD
Sbjct: 121 NLVRRLFDHQLGLDSLTPIASIQNRIRRWQGLTGKTIDLHVGDICDFEFLAETFKSFEPD 180
Query: 178 AVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTP 237
VVHFGEQRSAPYSMIDRSRAV+TQ NNVIGT+NVLFA+KEF +ECHLVKLGTMGEYGTP
Sbjct: 181 TVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTINVLFAIKEFSEECHLVKLGTMGEYGTP 240
Query: 238 NIDIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVV 297
NIDIEEG+ITI HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVV
Sbjct: 241 NIDIEEGFITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVV 300
Query: 298 YGVRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTV 357
YGV T+ETAMHEELCNR DYD VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTV
Sbjct: 301 YGVMTEETAMHEELCNRFDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTV 360
Query: 358 QCVELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEE 417
QCVELAIANPA+ GEFRVFNQFTEQ+SV LAALVTKAGEKLGL+V+TISVPNPRVEAEE
Sbjct: 361 QCVELAIANPAKLGEFRVFNQFTEQYSVRDLAALVTKAGEKLGLNVETISVPNPRVEAEE 420
Query: 418 HYYNAKHTKLIELGLQPHILSDSLLDSLLNFAIQFKDRVDSKQIMPSVSWRKIGTKPKTV 477
HYYNAKHTKL ELGL+PH+LSDSLLDS+LNFA+Q+KDRVD+KQIMPSVSW+KIG KP+T+
Sbjct: 421 HYYNAKHTKLAELGLKPHLLSDSLLDSVLNFAVQYKDRVDTKQIMPSVSWKKIGVKPQTL 480
Query: 478 AA 479
A
Sbjct: 481 RA 482
>sp|O48917|SQD1_ARATH UDP-sulfoquinovose synthase, chloroplastic OS=Arabidopsis thaliana
GN=SQD1 PE=1 SV=1
Length = 477
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/478 (77%), Positives = 413/478 (86%), Gaps = 4/478 (0%)
Query: 1 MAHLLSTSCSLNIPSCRKPSFQQLNQGLIGLPTSFTVKT-SKSPIQTVILSAQRSQRCHT 59
MAHLLS SC I S + + G T F + S+S ++ ++ ++ ++
Sbjct: 1 MAHLLSASCPSVISLSSSSSKNSVKPFVSG-QTFFNAQLLSRSSLKGLLFQEKKPRKSCV 59
Query: 60 VYATATPFTPTQSRSGLHQSSNDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSL 119
ATA P T Q ++N SK KRVM+IGGDGYCGWATALHLS K YEV IVD+L
Sbjct: 60 FRATAVPIT--QQAPPETSTNNSSSKPKRVMVIGGDGYCGWATALHLSKKNYEVCIVDNL 117
Query: 120 IRRLFDHQLGLDSLTPIASIHDRLRCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAV 179
+RRLFDHQLGL+SLTPIASIHDR+ WK+LTGK+IELY+GDICDFEFL+ESFKSFEPD+V
Sbjct: 118 VRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSV 177
Query: 180 VHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNI 239
VHFGEQRSAPYSMIDRSRAV+TQHNNVIGTLNVLFA+KEF +ECHLVKLGTMGEYGTPNI
Sbjct: 178 VHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI 237
Query: 240 DIEEGYITINHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 299
DIEEGYITI HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG
Sbjct: 238 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 297
Query: 300 VRTDETAMHEELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQC 359
V+TDET MHEEL NRLDYD VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQC
Sbjct: 298 VKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQC 357
Query: 360 VELAIANPAQPGEFRVFNQFTEQFSVNQLAALVTKAGEKLGLDVKTISVPNPRVEAEEHY 419
VE+AIANPA+ GEFRVFNQFTEQFSVN+LA+LVTKAG KLGLDVK ++VPNPRVEAEEHY
Sbjct: 358 VEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHY 417
Query: 420 YNAKHTKLIELGLQPHILSDSLLDSLLNFAIQFKDRVDSKQIMPSVSWRKIGTKPKTV 477
YNAKHTKL+ELGL+PH LSDSLLDSLLNFA+QFKDRVD+KQIMPSVSW+KIG K K++
Sbjct: 418 YNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSM 475
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1
Length = 338
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 138/353 (39%), Gaps = 59/353 (16%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
V++ GG GY G T + L GY+ I+D+L + +A IH S
Sbjct: 3 VLVTGGSGYIGSHTCVQLIEAGYKPVILDNLCN---------SKSSVLARIH-------S 46
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
LTG ELY GDI D L F + AV+HF ++ S+ +R + +NNV G
Sbjct: 47 LTGYTPELYAGDIRDRTLLDSIFAAHPIHAVIHFAGLKAVGESV---NRPLEYYNNNVFG 103
Query: 209 TLNVLFAMKEFRQECHLVKLGTMGEYG-TPNIDIEEGYITINHNGRTDTLPYPKQASSFY 267
TL +L AM+ Q +L+ + YG P I E + T SS Y
Sbjct: 104 TLVLLEAMRA-AQVKNLIFSSSATVYGDQPQIPYVESFPT-------------GSPSSPY 149
Query: 268 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNR 327
SK+ + ++ D + + H D G+ L
Sbjct: 150 GRSKLMVEQILQ------DVQLADPQWNMTILRYFNPVGAHPSGLMGEDPQGIPNN-LMP 202
Query: 328 FCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPA-------QPGEFRVFNQ 378
F Q AVG L ++G G T +RD + V+LA + A +PG +FN
Sbjct: 203 FIAQVAVGRRESLAIFGNGYPTPDGTGVRDYIHVVDLADGHVAAMKTLHGKPG-VHIFNL 261
Query: 379 FTE-QFSVNQLAALVTKA-GEKLGLDVKTISVPNPRVEAEEHYYNAKHTKLIE 429
SV Q+ A +KA G+ L PR E + Y A TK E
Sbjct: 262 GAGVGHSVLQVVAAFSKACGKPLAYHFA------PRREGDLPAYWADATKAAE 308
>sp|P55462|RFBB_RHISN Probable dTDP-glucose 4,6-dehydratase OS=Rhizobium sp. (strain
NGR234) GN=NGR_a03580 PE=3 SV=1
Length = 350
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 48/288 (16%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147
R+++ GG G+ G A +L + EV VD L + L SL P+ +
Sbjct: 2 RILVTGGAGFIGSALVRYLVSINAEVLNVDKLT-----YAGNLASLKPVEGL-------- 48
Query: 148 SLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVI 207
+N DICD ++E+F++F+PD V+H + S +DRS T ++ +
Sbjct: 49 ----RNYRFLRADICDRVAINEAFETFQPDYVIHLAAE-----SHVDRS---ITGADDFV 96
Query: 208 GT-LNVLFAMKE-FRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASS 265
T +N F M E RQ + + ++ +E Y ++ G+ + + P SS
Sbjct: 97 QTNVNGTFTMLETARQYWSNLSQNRKAFFKMLHVSTDEVYGSLGDRGQFEEVS-PYDPSS 155
Query: 266 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG-VRTDETAMHEELCNRLDYDGVFGTA 324
Y SK H + +G+ N YG E + + N LD
Sbjct: 156 PYSASKAASDHFATAWQRTYGLPVVISNCSNNYGPFHFPEKLIPLMILNALDR------- 208
Query: 325 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGE 372
PL VYG G R +L + D + + L I +PGE
Sbjct: 209 -----------KPLPVYGTGSNIRDWLYVDDHARALWL-IVREGRPGE 244
>sp|P44914|RMLB_HAEIN dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rffG PE=3 SV=1
Length = 338
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
+++ GG G+ G A++ +I D + +D LT A+ LR
Sbjct: 4 ILVTGGSGFIG-------------SALIRYIINHTQDFVINIDKLT-YAANQSALR---- 45
Query: 149 LTGKNIELYIG---DICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRS---RAVFTQ 202
+N Y+ DICD + F+ ++PDAV+H + S +DRS A F Q
Sbjct: 46 -EVENNPRYVFEKVDICDLNVIENIFEKYQPDAVMHLAAE-----SHVDRSISGAADFVQ 99
Query: 203 HNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQ 262
N++GT +L K + K T + + D G ++++ T+ PY
Sbjct: 100 -TNIVGTYTLLEVAKNYWHTLDEAKKTTF-RFHHISTDEVYGDLSLSEPAFTEQSPY--H 155
Query: 263 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322
SS Y SK +H + + +G+ N YG H E L
Sbjct: 156 PSSPYSASKAASNHLVQAWHRTYGLPVIITNSSNNYGAY-----QHAEKLIPL------- 203
Query: 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAI 364
A +G PL +YG G Q R +L + D VQ L +
Sbjct: 204 -----MISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYLVL 240
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 131/325 (40%), Gaps = 48/325 (14%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ H ++ S+ + LR
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF------H----NAFRGGGSLPESLRR 51
Query: 146 WKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSM---IDRSRAVFTQ 202
+ LTG+++E DI D L FK + AV+HF ++ S+ +D R
Sbjct: 52 VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRV---- 107
Query: 203 HNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQ 262
N+ GT+ +L MK + +LV + YG P Y+ ++ T P
Sbjct: 108 --NLTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQ------YLPLDEAHPTGGCTNPYG 158
Query: 263 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322
S F+ + D C+A D V + T H C D G+
Sbjct: 159 KSKFFIEEMIRD------LCQA------DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPN 206
Query: 323 TALNRFCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF------R 374
L + Q A+G L V+G T +RD + V+LA + A + R
Sbjct: 207 N-LMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCR 265
Query: 375 VFNQFT-EQFSVNQLAALVTKAGEK 398
++N T +SV Q+ + KA K
Sbjct: 266 IYNLGTGTGYSVLQMVQAMEKASGK 290
>sp|Q9S642|RMLB_NEIMA dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=rfbB1 PE=3 SV=1
Length = 341
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 110/282 (39%), Gaps = 55/282 (19%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
+++++ GG G+ G A+V +IR D + LD LT ++
Sbjct: 2 RKILVTGGAGFIG-------------SAVVRHIIRNTQDSVVNLDKLTYAGNL------- 41
Query: 147 KSLT----GKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDR---SRAV 199
+SLT DICD L F PDAV+H + S +DR S
Sbjct: 42 ESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAE-----SHVDRSIGSAGE 96
Query: 200 FTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPY 259
F Q N++GT N+L A + +RQ+ K + + D G ++ + T+T PY
Sbjct: 97 FIQ-TNIVGTFNLLEAARAYRQQMPSEKHEAF-RFHHISTDEVYGDLSGTDDLFTETAPY 154
Query: 260 PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG-VRTDETAMHEELCNRLDYD 318
SS Y SK H + + +G+ N YG E + + N LD
Sbjct: 155 --APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALD-- 210
Query: 319 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 360
G PL VYG G Q R +L + D + +
Sbjct: 211 ----------------GKPLPVYGDGMQIRDWLFVEDHARAL 236
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRL 143
S +K V++ GG GY G T + L GY+ + D+L S +D +
Sbjct: 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSN----------------STYDSV 52
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
+ LT +I Y D+CD + L + FK ++ D+V+HF ++ S R H
Sbjct: 53 ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYY---H 109
Query: 204 NNVIGTLNVLFAMKEF 219
NN++GT+ +L M+++
Sbjct: 110 NNILGTVVLLELMQQY 125
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 114/281 (40%), Gaps = 53/281 (18%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
+ ++GG GY G T L G +V ++D+LI H+ +D R R
Sbjct: 3 IAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLIT---GHRKAVDP---------RAR---- 46
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
Y GDI D+ FLS+ F + D +VHF P SM D + NN G
Sbjct: 47 -------FYQGDIRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYF---DNNTGG 96
Query: 209 TLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYITINHNGRTDTLPYPKQASSFY 267
+ +L AM +F + +V T YG P + I+E TD P+ ++ Y
Sbjct: 97 MITLLEAMNQFGIK-KIVFSSTAATYGEPKQVPIKE----------TD----PQVPTNPY 141
Query: 268 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTALNR 327
SK+ + + A+G++ L V G D + + T +
Sbjct: 142 GESKLAMEKIMHWADVAYGLKFVALRYFNVAGAMPDGSIGEDHHPE---------THIVP 192
Query: 328 FCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIAN 366
+Q A G L +YG T+ ++RD V V+LA A+
Sbjct: 193 IILQVAAGTRTGLQIYGDDYPTKDGTNVRDYVHVVDLADAH 233
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 129/325 (39%), Gaps = 48/325 (14%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A++V++ GG GY G T L L GY ++D+ ++ S+ + LR
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNF----------HNAFRGGGSLPESLRR 51
Query: 146 WKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSM---IDRSRAVFTQ 202
+ LTG+++E DI D L FK AV+HF ++ S+ +D R
Sbjct: 52 VQELTGRSVEFEEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRV---- 107
Query: 203 HNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQ 262
N+ GT+ +L MK + +LV + YG P Y+ ++ T P
Sbjct: 108 --NLTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQ------YLPLDEAHPTGGCTNPYG 158
Query: 263 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322
S F+ + D C+A D V + T H C D G+
Sbjct: 159 KSKFFIEEMIRD------LCQA------DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPN 206
Query: 323 TALNRFCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF------R 374
L + Q A+G L V+G T +RD + V+LA + A + R
Sbjct: 207 N-LMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCR 265
Query: 375 VFNQFT-EQFSVNQLAALVTKAGEK 398
++N T +SV Q+ + KA K
Sbjct: 266 IYNLGTGTGYSVLQMVQAMEKASGK 290
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
+++ GG GY G T + L N GY+V IVD+L +D +A + +R
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYD---------AVARVEFIVR---- 54
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
K+I+ + D+ D E L++ F +F+ V+HF ++ SM + NN+ G
Sbjct: 55 ---KSIKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESM---KLPLEYYDNNICG 108
Query: 209 TLNVLFAMKEFR 220
T+ +L M+E R
Sbjct: 109 TITLLNVMREHR 120
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 19/122 (15%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
V+I GG G+ G TA+ L GY+ I+D+L A++ RLR
Sbjct: 3 VLITGGTGFIGSHTAVSLVQSGYDAVILDNL-------------CNSSAAVLPRLR---Q 46
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
+TG+NI Y GDI D + L + F E ++V+HF ++ S+ + ++ NNV G
Sbjct: 47 ITGRNIPFYQGDIRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTK---YYGNNVYG 103
Query: 209 TL 210
+L
Sbjct: 104 SL 105
>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE
PE=3 SV=1
Length = 339
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
+++ GG GY G T + L N GYE+ ++D+L S + L K
Sbjct: 3 ILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSN----------------SSAEALNRVKE 46
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQ--HNNV 206
+TGK++ Y D+ D E + F E +AV+HF A + S A+ + HNN+
Sbjct: 47 ITGKDLTFYEADLLDREAVDSVFAENEIEAVIHF-----AGLKAVGESVAIPLKYYHNNL 101
Query: 207 IGTLNVLFAMKEF 219
GT + AM+++
Sbjct: 102 TGTFILCEAMEKY 114
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 109/294 (37%), Gaps = 72/294 (24%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHDRL 143
KR++I GG G+ G L G+EV +VD+ +R +H +G +
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE------------ 136
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
N EL D+ + ++ E D + H S P M + + T
Sbjct: 137 ---------NFELINHDVVEPLYI-------EVDQIYHLASPASPPNYMYN---PIKTLK 177
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N IGTLN+L K R L+ T YG P + +P+
Sbjct: 178 TNTIGTLNMLGLAK--RVGARLLLASTSEVYGDPEV-------------------HPQSE 216
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATD------LNQGVVYGVRTDETAMHEELCNRLDY 317
+ H++ + C G R + + Q GV + R+
Sbjct: 217 DYWGHVNPIGPR-----ACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHM 268
Query: 318 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
+ G ++ F +QA G PLTVYG G QTR + + D V V L +N + P
Sbjct: 269 ND--GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP 320
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 110/294 (37%), Gaps = 72/294 (24%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHDRL 143
KR++I GG G+ G L G+EV +VD+ +R +H +G H+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----------HE-- 136
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
N EL D+ + ++ E D + H S P M + + T
Sbjct: 137 ---------NFELINHDVVEPLYI-------EVDQIYHLASPASPPNYMYN---PIKTLK 177
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N IGTLN+L K R L+ T YG P + +P+
Sbjct: 178 TNTIGTLNMLGLAK--RVGARLLLASTSEVYGDPEV-------------------HPQSE 216
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATD------LNQGVVYGVRTDETAMHEELCNRLDY 317
+ H++ + C G R + + Q GV + R+
Sbjct: 217 DYWGHVNPIGPR-----ACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHM 268
Query: 318 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
+ G ++ F +QA G PLTVYG G QTR + + D V V L +N + P
Sbjct: 269 ND--GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP 320
>sp|B0RVL0|RMLB_XANCB dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=rfbB PE=3 SV=1
Length = 351
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 51/281 (18%)
Query: 90 MIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL 149
++ GG G+ G L ++G V + LD+LT + L SL
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRV--------------VNLDALTYAGN----LNTLASL 46
Query: 150 TGKNIELYI-GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRS---RAVFTQHNN 205
G +++ GDI D ++ + +PDAV++F + S +DRS F Q N
Sbjct: 47 EGNADHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAE-----SHVDRSIEGPGAFIQ-TN 100
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGR-TDTLPYPKQAS 264
V+GTL +L A++++ + + + ++ +E Y T+ G+ T+T PY +
Sbjct: 101 VVGTLALLEAVRDYWKALPDTR---RDAFRFLHVSTDEVYGTLGETGKFTETTPY--APN 155
Query: 265 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324
S Y SK H + +G+ N YG E+L
Sbjct: 156 SPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYG----PYHFPEKL------------- 198
Query: 325 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIA 365
+ +A G PL VYG G Q R +L + D + + +A
Sbjct: 199 IPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLA 239
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 110/294 (37%), Gaps = 72/294 (24%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHDRL 143
KR++I GG G+ G L G+EV +VD+ +R +H +G H+
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----------HE-- 136
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
N EL D+ + ++ E D + H S P M + + T
Sbjct: 137 ---------NFELINHDVVEPLYI-------EVDQIYHLASPASPPNYMYN---PIKTLK 177
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N IGTLN+L K R L+ T YG P + +P+
Sbjct: 178 TNTIGTLNMLGLAK--RVGARLLLASTSEVYGDPEV-------------------HPQSE 216
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATD------LNQGVVYGVRTDETAMHEELCNRLDY 317
+ H++ + C G R + + Q GV + R+
Sbjct: 217 DYWGHVNPIGPR-----ACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHM 268
Query: 318 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
+ G ++ F +QA G PLTVYG G QTR + + D V V L +N + P
Sbjct: 269 ND--GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP 320
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 109/294 (37%), Gaps = 72/294 (24%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHDRL 143
KR++I GG G+ G L G+EV +VD+ +R +H +G +
Sbjct: 89 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE------------ 136
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
N EL D+ + ++ E D + H S P M + + T
Sbjct: 137 ---------NFELINHDVVEPLYI-------EVDQIYHLASPASPPNYMYN---PIKTLK 177
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N IGTLN+L K R L+ T YG P + +P+
Sbjct: 178 TNTIGTLNMLGLAK--RVGARLLLASTSEVYGDPEV-------------------HPQSE 216
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATD------LNQGVVYGVRTDETAMHEELCNRLDY 317
+ H++ + C G R + + Q GV + R+
Sbjct: 217 DYWGHVNPIGPR-----ACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHM 268
Query: 318 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
+ G ++ F +QA G PLTVYG G QTR + + D V V L +N + P
Sbjct: 269 ND--GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP 320
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 21/135 (15%)
Query: 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRL 143
S+ K ++ GG GY G T + L GY+ +VD+L S ++ +
Sbjct: 2 SEDKYCLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSN----------------SSYESV 45
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
+ LTG+ I+ D+C+ E L++ F ++ D+V+HF ++ S ++ T +
Sbjct: 46 ARMELLTGQEIKFAKIDLCELEPLNKLFDDYKIDSVLHFAGLKAVGES----TQIPLTYY 101
Query: 204 -NNVIGTLNVLFAMK 217
NN++GT+N+L MK
Sbjct: 102 FNNIVGTINLLECMK 116
>sp|P55294|RMLB_NEIMB dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=rfbB1 PE=3 SV=2
Length = 355
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 105/279 (37%), Gaps = 49/279 (17%)
Query: 87 KRVMIIGGDGYCGWATALHL-SNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
+++++ GG G+ G A H+ N V VD L + L+SLT +A
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLT-----YAGNLESLTEVAD------- 49
Query: 146 WKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDR---SRAVFTQ 202
DICD L F + PDAV+H + S +DR S F Q
Sbjct: 50 -----NPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAE-----SHVDRSIGSAGEFIQ 99
Query: 203 HNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQ 262
N++GT N+L A + + Q+ + + +I +E Y + T P
Sbjct: 100 -TNIVGTFNLLEAARAYWQQ---MPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYA 155
Query: 263 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG-VRTDETAMHEELCNRLDYDGVF 321
SS Y SK H + + +G+ N YG E + + N LD
Sbjct: 156 PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALD----- 210
Query: 322 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 360
G PL VYG G Q R +L + D + +
Sbjct: 211 -------------GKPLPVYGDGMQIRDWLFVEDHARAL 236
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 109/294 (37%), Gaps = 72/294 (24%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHDRL 143
KR++I GG G+ G L G+EV +VD+ +R +H +G +
Sbjct: 87 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE------------ 134
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
N EL D+ + ++ E D + H S P M + + T
Sbjct: 135 ---------NFELINHDVVEPLYI-------EVDQIYHLASPASPPNYMYN---PIKTLK 175
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N IGTLN+L K R L+ T YG P + +P+
Sbjct: 176 TNTIGTLNMLGLAK--RVGARLLLASTSEVYGDPEV-------------------HPQNE 214
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATD------LNQGVVYGVRTDETAMHEELCNRLDY 317
+ H++ + C G R + + Q GV + +R+
Sbjct: 215 DYWGHVNPIGPR-----ACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGSRMHM 266
Query: 318 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
+ G ++ F +QA G LTVYG G QTR + + D V V L +N + P
Sbjct: 267 ND--GRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSP 318
>sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1
SV=1
Length = 344
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147
R+M+ GG GY G T + L GY IVD+L SL I + +
Sbjct: 7 RIMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNS---------SLEAIKRV-------E 50
Query: 148 SLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVI 207
S+TGK IE + DI + + L E F++ +V+HF ++ S + +NN+
Sbjct: 51 SITGKEIEFHHVDIMNEKALDEIFETGNIRSVIHFAGLKAVGES---NKLPLKYYNNNIA 107
Query: 208 GTLNVLFAMKEFRQECHLVKLGTMGEYGTP 237
GTL +L M + R + LV + YG P
Sbjct: 108 GTLTLLNLMDKHRVK-KLVFSSSATVYGDP 136
>sp|P0C7J0|RMLB_XANCP dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rfbB PE=3 SV=1
Length = 351
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 114/281 (40%), Gaps = 51/281 (18%)
Query: 90 MIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKSL 149
++ G G+ G L ++G V + LD+LT + L SL
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRV--------------VNLDALTYAGN----LNTLASL 46
Query: 150 TGKNIELYI-GDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRS---RAVFTQHNN 205
G +++ GDI D ++ + +PDAV++F + S +DRS F Q N
Sbjct: 47 EGNADHIFVKGDIGDGALVTRLLQEHQPDAVLNFAAE-----SHVDRSIEGPGAFIQ-TN 100
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGR-TDTLPYPKQAS 264
V+GTL +L A++++ + + + ++ +E Y T+ G+ T+T PY +
Sbjct: 101 VVGTLALLEAVRDYWKALPDTR---RDAFRFLHVSTDEVYGTLGETGKFTETTPY--APN 155
Query: 265 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324
S Y SK H + +G+ N YG E+L
Sbjct: 156 SPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYG----PYHFPEKL------------- 198
Query: 325 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIA 365
+ +A G PL VYG G Q R +L + D + + +A
Sbjct: 199 IPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLA 239
>sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2
Length = 338
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
+++ GG GY G T + L N G EV ++D+L S L K
Sbjct: 3 ILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCN----------------SSPKSLERVKQ 46
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
+TGK + Y GDI D L + F E ++V+HF ++ S+ + NNV G
Sbjct: 47 ITGKEAKFYEGDILDRALLQKIFAENEINSVIHFAGLKAVGESV---QKPTEYYMNNVAG 103
Query: 209 TLNVLFAMKE 218
TL ++ MK+
Sbjct: 104 TLVLIQEMKK 113
>sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale
PE=2 SV=1
Length = 350
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
V++ GG GY G T L + N GY V VD+L ++ + A + + L +
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNL----------CNAYSSGAKLPEALSRVQE 55
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQ--HNNV 206
+TGK + Y DI D E + F+ + D V HF A + S + Q HNN+
Sbjct: 56 ITGKKVNFYRVDITDREQVRSVFQEHKIDMVAHF-----AALKAVGESCRIPLQYYHNNM 110
Query: 207 IGTLNVLFAMKE 218
GT +L AM +
Sbjct: 111 TGTNVLLEAMAD 122
>sp|P37761|RMLB_NEIGO dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3
SV=1
Length = 346
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 105/277 (37%), Gaps = 45/277 (16%)
Query: 87 KRVMIIGGDGYCGWATALHL-SNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
K +++ GG G+ G A H+ N V +D L + L+SLT IA
Sbjct: 7 KNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLT-----YAGNLESLTDIAD------- 54
Query: 146 WKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQ--H 203
DICD L F + PDAV+H + S +DR+ +
Sbjct: 55 -----NPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAE-----SHVDRAIGSAGEFIR 104
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N++GT ++L A + + Q+ K + +I +E Y ++ T P
Sbjct: 105 TNIVGTFDLLEAARAYWQQMPSEKREAFRFH---HISTDEVYGDLHGTDDLFTETTPYAP 161
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323
SS Y SK H + + + + + N YG R E+L +
Sbjct: 162 SSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQ----FPEKLIPLM-------- 209
Query: 324 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 360
+ A G PL VYG G Q R +L + D + +
Sbjct: 210 -----ILNALSGKPLPVYGDGAQIRDWLFVEDHARAL 241
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 108/294 (36%), Gaps = 72/294 (24%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHDRL 143
KR++I GG G+ G L G+EV +VD+ +R +H +G +
Sbjct: 90 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE------------ 137
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
N EL D+ + ++ E D + H S P M + + T
Sbjct: 138 ---------NFELINHDVVEPLYI-------EVDQIYHLASPASPPNYMYN---PIKTLK 178
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N IGTLN+L K R L+ T YG P + +P+
Sbjct: 179 TNTIGTLNMLGLAK--RVGARLLLASTSEVYGDPEV-------------------HPQSE 217
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATD------LNQGVVYGVRTDETAMHEELCNRLDY 317
+ H++ + C G R + + Q GV + R+
Sbjct: 218 EYWGHVNPIGPR-----ACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHM 269
Query: 318 DGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ-CVELAIANPAQP 370
+ G ++ F +QA G LTVYG G QTR + + D V V L +N + P
Sbjct: 270 ND--GRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSP 321
>sp|P26391|RMLB_SALTY dTDP-glucose 4,6-dehydratase OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=rfbB PE=1 SV=1
Length = 361
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 63/293 (21%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147
+++I GG G+ G A+V +I+ D + +D LT ++ + L
Sbjct: 2 KILITGGAGFIG-------------SAVVRHIIKNTQDTVVNIDKLTYAGNL-ESLSDIS 47
Query: 148 SLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRS---RAVFTQHN 204
N E DICD ++ F+ ++PDAV+H + S +DRS A F +
Sbjct: 48 ESNRYNFEH--ADICDSAEITRIFEQYQPDAVMHLAAE-----SHVDRSITGPAAFIE-T 99
Query: 205 NVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-----IDIEEGYITINHNGRTD---T 256
N++GT +L +++ +GE N I +E Y + H + T
Sbjct: 100 NIVGTYALLEVARKY--------WSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT 151
Query: 257 LPYPKQASSF-----YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEEL 311
LP + +++ Y SK H + + +G+ N YG E+L
Sbjct: 152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYG----PYHFPEKL 207
Query: 312 CNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAI 364
+ + A G PL +YGKG Q R +L + D + + + +
Sbjct: 208 -------------IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV 247
>sp|P56986|GALE_NEIMC UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C
GN=galE PE=3 SV=1
Length = 339
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 31/130 (23%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
K++++ GG G+ G T + L G++V I+D+L + I RL
Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSIN-------------ILPRL--- 45
Query: 147 KSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHF------GEQRSAPYSMIDRSRAVF 200
K++TG+ I Y GDI D E L F D+V+HF GE + P D
Sbjct: 46 KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYD------ 99
Query: 201 TQHNNVIGTL 210
NNV G+L
Sbjct: 100 ---NNVSGSL 106
>sp|P56985|GALE_NEIMB UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=galE PE=3 SV=1
Length = 339
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 31/130 (23%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
K++++ GG G+ G T + L G++V I+D+L + I RL
Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSIN-------------ILPRL--- 45
Query: 147 KSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHF------GEQRSAPYSMIDRSRAVF 200
K++TG+ I Y GDI D E L F D+V+HF GE + P D
Sbjct: 46 KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYD------ 99
Query: 201 TQHNNVIGTL 210
NNV G+L
Sbjct: 100 ---NNVSGSL 106
>sp|Q9Y7X5|UGE1_SCHPO UDP-glucose 4-epimerase uge1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=uge1 PE=1 SV=1
Length = 355
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 39/152 (25%)
Query: 74 SGLHQSSNDPSKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSL 133
+G+H+ + V++ GG GY G T + L KGY+V IVD+L
Sbjct: 2 TGVHEGT--------VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCN------------ 41
Query: 134 TPIASIHDRLRCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHF------GEQRS 187
+ + ++H R+ + LTGK + + D+ D L + F + AV+HF GE
Sbjct: 42 SRVEAVH-RI---EKLTGKKVIFHQVDLLDEPALDKVFANQNISAVIHFAGLKAVGESVQ 97
Query: 188 APYSMIDRSRAVFTQHNNVIGTLNVLFAMKEF 219
P S NN+ GT+N++ MK++
Sbjct: 98 VPLSY---------YKNNISGTINLIECMKKY 120
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 126/313 (40%), Gaps = 69/313 (22%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147
++++ GG GY G + L +G+EV IVD+L G P+ +
Sbjct: 2 KLLVTGGAGYVGSVCSTVLLEQGHEVTIVDNL-------TTGNRDAVPLGATF------- 47
Query: 148 SLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVI 207
+E I D+ D S+SF DAV+HF RS +++ + QH N++
Sbjct: 48 ------VEGDIKDVADNVLSSDSF-----DAVLHFA-ARSLVGESVEKPDE-YWQH-NMV 93
Query: 208 GTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQASSFY 267
TL +L AMK ++V T YG P + I + P ++ Y
Sbjct: 94 TTLALLDAMKR-NNVRNIVFSSTAATYGEPET------VPITEDA-------PTHPTNPY 139
Query: 268 HLSKVHDSHNIAFTCKAWGIRATDL---NQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324
+K+ + I A+G AT L N YG+ + + T
Sbjct: 140 GATKLSIDYAITSYAHAYGFAATSLRYFNVAGAYGLVGENREIE--------------TH 185
Query: 325 LNRFCVQAAVGH--PLTVYG------KGGQTRGYLDIRDTVQCVELAIANPAQPGEFRVF 376
L +Q A+GH + ++G G R Y+ IRD LA+ + + G R+F
Sbjct: 186 LIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHILALQSNVE-GSHRIF 244
Query: 377 NQFT-EQFSVNQL 388
N + E +SV Q+
Sbjct: 245 NLGSGEGYSVKQV 257
>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 354
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRL 143
+ + +++ GG G+ G T + L +G+ V+I+D+L + D ++H
Sbjct: 7 ASGETILVTGGAGFIGSHTVVQLLKQGFHVSIIDNLYNSVID------------AVHRVR 54
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
L N+ + GD+ + L F + DAV+HF + S+++ S
Sbjct: 55 LLVGPLLSSNLHFHHGDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSN---YYD 111
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN 238
NN++ T+N+ M +F + LV + YG P+
Sbjct: 112 NNLVATINLFQVMSKFNCK-KLVISSSATVYGQPD 145
>sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3
SV=1
Length = 336
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
++I GG GY G T L L +G V ++D+LI +SL ++ I
Sbjct: 3 ILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINS------SAESLARVSKI--------- 47
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
G+ Y GDI D L F S + D+V+HF +S S+ + + NNV+G
Sbjct: 48 -CGRKPNFYHGDILDRSCLKLIFSSHKIDSVIHFAGLKSVGESV---EKPIEYYQNNVVG 103
Query: 209 TLNVLFAM 216
++ +L M
Sbjct: 104 SITLLEEM 111
>sp|P56997|GALE_NEIMA UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=galE PE=3 SV=1
Length = 339
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 31/130 (23%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
K +++ GG G+ G T + L G++V I+D+L + I RL
Sbjct: 2 KNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSIN-------------ILPRL--- 45
Query: 147 KSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHF------GEQRSAPYSMIDRSRAVF 200
K++TG+ I Y GDI D E L F D+V+HF GE + P D
Sbjct: 46 KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYD------ 99
Query: 201 TQHNNVIGTL 210
NNV G+L
Sbjct: 100 ---NNVSGSL 106
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 126/324 (38%), Gaps = 48/324 (14%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
++V++ GG GY G T L L GY ++D+ + G DS+ + LR
Sbjct: 2 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAI----RGEDSMP------ESLRRV 51
Query: 147 KSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSM---IDRSRAVFTQH 203
+ LTG+++E DI D L FK AV+HF ++ S+ +D R
Sbjct: 52 QELTGRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRV----- 106
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQA 263
N+ GT+ +L M+ + +LV + YG P Y+ ++ T P
Sbjct: 107 -NLTGTIQLLEIMRAHGVK-NLVFSSSATVYGNPQ------YLPLDEAHPTGGCTNPYGK 158
Query: 264 SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGT 323
S F+ + D C+A D V + H D G+
Sbjct: 159 SKFFIEEMIRD------LCRA------DTAWNAVLLRYFNPIGAHASGRIGEDPQGIPNN 206
Query: 324 ALNRFCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF------RV 375
L + Q A+G L V+G T +RD + V+LA + A + R
Sbjct: 207 -LMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRT 265
Query: 376 FNQFT-EQFSVNQLAALVTKAGEK 398
+N T +SV Q+ + KA K
Sbjct: 266 YNLGTGTGYSVLQMVQAMEKASGK 289
>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70)
GN=galE PE=3 SV=1
Length = 338
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
+++ GG GY G T + L N +V ++D+L SL +A I
Sbjct: 3 ILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNS------SPKSLERVAQI--------- 47
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHF------GE--QRSAPYSMIDRSRAVF 200
TGK ++ Y GDI D L + F + +V+HF GE Q+ A Y M
Sbjct: 48 -TGKQVKFYQGDILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYM-------- 98
Query: 201 TQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYP 260
NNV G+L ++ MK+ + V + YG P I I I + + P
Sbjct: 99 ---NNVTGSLVLIQEMKK-AGVWNFVFSSSATVYGDPEI------IPITESCKVGGTTNP 148
Query: 261 KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320
S F + D IA + I V HE D +G+
Sbjct: 149 YGTSKFMVEQILKD---IAKATPEFSITILRYFNPV---------GAHESGLIGEDPNGI 196
Query: 321 FGTALNRFCVQAAVGH--PLTVYGKGGQTRGYLDIRDTVQCVELAIAN 366
L + Q A+G L+V+G +T +RD + V+LAI +
Sbjct: 197 PNNLL-PYISQVAIGKLPQLSVFGSDYETHDGTGVRDYIHVVDLAIGH 243
>sp|P27830|RMLB2_ECOLI dTDP-glucose 4,6-dehydratase 2 OS=Escherichia coli (strain K12)
GN=rffG PE=1 SV=3
Length = 355
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 48/290 (16%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYE-VAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
++++I GG G+ G A ++ N+ + V +VD L + L SL P+A +R
Sbjct: 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLT-----YAGNLMSLAPVAQ-SERFAF 55
Query: 146 WKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRS---RAVFTQ 202
K DICD L+ F +PD V+H + S +DRS A F +
Sbjct: 56 EKV-----------DICDRAELARVFTEHQPDCVMHLAAE-----SHVDRSIDGPAAFIE 99
Query: 203 HNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNGRTDTLPYPKQ 262
N++GT +L A + + + + + +I +E Y ++ T P
Sbjct: 100 -TNIVGTYTLLEAARAY---WNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA 155
Query: 263 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322
SS Y SK H + + +G+ N YG E+L
Sbjct: 156 PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYG----PYHFPEKL----------- 200
Query: 323 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGE 372
+ + A G L VYG G Q R +L + D + + +A + GE
Sbjct: 201 --IPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARAL-YCVATTGKVGE 247
>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2
SV=1
Length = 350
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
AK V++ GG GY G T L L GY +VD+ +D+ + AS+ R++
Sbjct: 2 AKSVLVTGGAGYIGSHTVLQLLEGGYSAVVVDN-----YDN-------SSAASLQ-RVKK 48
Query: 146 WKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
G + + D+ D L + F + DAV+HF ++ S+ + + +NN
Sbjct: 49 LAGENGNRLSFHQVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESV---EKPLLYYNNN 105
Query: 206 VIGTLNVLFAMKEF 219
++GT+ +L M ++
Sbjct: 106 IVGTVTLLEVMAQY 119
>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1
Length = 350
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 84 SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRL 143
+ ++++++ G G+ G T + L N G+ V+I+D+ FD+ + + ++
Sbjct: 3 ASSQKILVTGSAGFIGTHTVVQLLNNGFNVSIIDN-----FDNSV-------MEAVERVR 50
Query: 144 RCWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH 203
S +N+E +GD+ + + L + F + DAV+HF ++ S ++ R F
Sbjct: 51 EVVGSNLSQNLEFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGES-VENPRRYF--D 107
Query: 204 NNVIGTLNVLFAMKEFRQEC-HLVKLGTMGEYGTP 237
NN++GT+N+ M + C +V + YG P
Sbjct: 108 NNLVGTINLYEVMA--KHNCKKMVFSSSATVYGQP 140
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
+++ GG GY G T + L N+ E+ ++D+L S L K
Sbjct: 3 ILVTGGAGYIGSHTLVELLNENREIVVLDNLSN----------------SSEVSLERVKQ 46
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
+TGK+++ Y GDI D + L + F + ++V+HF ++ + +R T NNV G
Sbjct: 47 ITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGETSENR---YVTIKNNVTG 103
Query: 209 TLNVLFAM 216
++ ++ M
Sbjct: 104 SIVLVEEM 111
>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2
SV=3
Length = 351
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 86 AKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRC 145
A+ V++ GG GY G T L L GY V +VD+L + L + +A+ H
Sbjct: 3 ARNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDN---SSAVSLQRVKKLAAEH----- 54
Query: 146 WKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNN 205
G+ + + D+ D L + F + DAV+HF ++ S+ + + +NN
Sbjct: 55 -----GERLSFHQVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESV---EKPLLYYNNN 106
Query: 206 VIGTLNVLFAMKEFRQEC-HLVKLGTMGEYGTP 237
++GT+ +L M + C +LV + YG+P
Sbjct: 107 LVGTITLLEVMAQ--HGCKNLVFSSSATVYGSP 137
>sp|P96995|GALE_STRMU UDP-glucose 4-epimerase OS=Streptococcus mutans serotype c (strain
ATCC 700610 / UA159) GN=galE PE=3 SV=2
Length = 333
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 61/286 (21%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTP--IASIHDRLRCW 146
++++GG GY G +VD LI + + + +DSL A++H +
Sbjct: 3 ILVLGGAGYIG-------------SHMVDRLIEKGEEEVVVVDSLVTGHRAAVHPAAK-- 47
Query: 147 KSLTGKNIELYIGDICDFEFLSESFK-SFEPDAVVHFGEQRSAPYSMIDRSRAVFTQH-- 203
Y GD+ D EF+S F+ + + DAV+HF A YS++ S ++
Sbjct: 48 ---------FYQGDLADREFMSMVFRENPDVDAVIHF-----AAYSLVAESMKKPLKYFD 93
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPN-IDIEEGYITINHNGRTDTLPYPKQ 262
NN G + +L M EF + ++V T YG P+ I I+E P++
Sbjct: 94 NNTAGMIKLLEVMSEFGVK-YIVFSSTAATYGIPDEIPIKET--------------TPQR 138
Query: 263 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFG 322
+ Y SK+ + ++ +A+GI+ L V G + D + + D
Sbjct: 139 PINPYGESKLMMETIMKWSDRAYGIKFVPLRYFNVAGAKPDGS---------IGEDHSPE 189
Query: 323 TALNRFCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIAN 366
T L +Q A G + ++G T ++RD V +LA A+
Sbjct: 190 THLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAH 235
>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1
Length = 347
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 129/327 (39%), Gaps = 55/327 (16%)
Query: 87 KRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCW 146
++V++ GG GY G T L L GY ++D+ +S+ S+ + LR
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNF----------HNSIRGEDSMPESLRRV 52
Query: 147 KSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSM---IDRSRAVFTQH 203
+ LTG+++E DI D L FK AV+HF ++ S+ +D R
Sbjct: 53 QELTGRSVEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRV----- 107
Query: 204 NNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITINHNG---RTDTLPYP 260
N+ GT+ +L M+ + LV + YG P + + G R T PY
Sbjct: 108 -NLTGTIQLLEIMRAMGVKS-LVFSSSATVYGKP--------VPASGRGPPHRGCTKPYG 157
Query: 261 KQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGV 320
K S F+ + D + AW A L + G H D G+
Sbjct: 158 K--SKFFIEEMIQD---LCRADTAW--NAVLLRYFIPIGA-------HRSARIGEDPQGI 203
Query: 321 FGTALNRFCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQPGEF----- 373
L + Q A+G L V+G T +RD + V+LA + A +
Sbjct: 204 PNN-LMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCG 262
Query: 374 -RVFNQFT-EQFSVNQLAALVTKAGEK 398
R++N T +SV Q+ + KA K
Sbjct: 263 CRIYNLGTGTGYSVLQMVQAMEKASGK 289
>sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2
SV=1
Length = 330
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 57/280 (20%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147
+V++IGG GY G L +G +V ++D+L H+ +D P A
Sbjct: 2 KVLVIGGAGYIGSHAVRELVKEGNDVLVLDALYTG---HRKAVD---PKA---------- 45
Query: 148 SLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRS--RAVFTQHNN 205
+ Y GDI D +S+ + + DAV+HF A YS++ S + + NN
Sbjct: 46 -------KFYQGDIEDTFLVSKILRDEKIDAVMHF-----AAYSLVPESVKKPLKYYDNN 93
Query: 206 VIGTLNVLFAMKEFRQECHLVKLGTMGEYGTP-NIDIEEGYITINHNGRTDTLPYPKQAS 264
V G +++L AM + + +LV + YG P + I E DT P
Sbjct: 94 VTGMISLLQAMNDANVK-YLVFSSSAATYGIPKKLPITE-----------DT---PLNPI 138
Query: 265 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRLDYDGVFGTA 324
+ Y +K+ +A+ KA GI+ T L V G +D + + D T
Sbjct: 139 NPYGETKMMMEKIMAWADKADGIKYTALRYFNVAGASSDGS---------IGEDHAPETH 189
Query: 325 LNRFCVQAAVG--HPLTVYGKGGQTRGYLDIRDTVQCVEL 362
L +++A+ T++G T+ ++RD VQ +L
Sbjct: 190 LIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDYVQVEDL 229
>sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1
Length = 355
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 133/321 (41%), Gaps = 56/321 (17%)
Query: 72 SRSGLHQSSNDP-SKAKRVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGL 130
S +G +S P S AKRV++ GG G+ A H+ V++V+ + + L
Sbjct: 2 SVAGRAESLGPPDSFAKRVLVTGGAGFI----ASHMI-----VSLVEDYPNYMI---INL 49
Query: 131 DSLTPIASIHDRLRCWKSLTGK-NIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAP 189
D L AS L+ ++++ K N + GDICD F+ F++ + D V+HF Q
Sbjct: 50 DKLDYCAS----LKNLETISNKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVD 105
Query: 190 YSMIDRSRAVFTQHNNVIGTLNVLFAMKEFRQECHLVKLGTMGEYGTPNIDIEEGYITIN 249
S + RA + NV GT ++ A E R E + + T YG ++D E +
Sbjct: 106 LSFV---RAFEFTYVNVYGTHVLVSAAHEARVE-KFIYVSTDEVYGG-SLDKEFDESS-- 158
Query: 250 HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHE 309
PKQ ++ Y SK + + + VYG +
Sbjct: 159 ----------PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPHQYPEKVIP 208
Query: 310 ELCNRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQ 369
+ + L + NR C ++G G QTR +L D V+ L + +
Sbjct: 209 KFISLLQH--------NRKC---------CIHGTGLQTRNFLYATDVVEAF-LTVLKKGK 250
Query: 370 PGEFRVFNQFTE-QFSVNQLA 389
PGE ++N T + SV QLA
Sbjct: 251 PGE--IYNIGTNFEMSVLQLA 269
>sp|P47364|GALE_MYCGE UDP-glucose 4-epimerase OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=galE PE=3 SV=1
Length = 340
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 77/195 (39%), Gaps = 48/195 (24%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147
RV I+GG GY G A + + D LI + D+ + K
Sbjct: 7 RVAIVGGIGYIGSCFASFIKEQN------DKLIVTVIDN-------------NKNNHVIK 47
Query: 148 SLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHN--- 204
L IE Y D+ D L+E + +PD V HF + S S+ HN
Sbjct: 48 LLKKIGIEFYFADLLDRHKLTEVIAAIQPDVVFHFAAKTSVSESV----------HNPLK 97
Query: 205 ----NVIGTLNVLFAMKEFRQECHLVKLGTMGEYG-TPNIDIEEGYITINHNGRTDTLPY 259
NVIGTLN++ A+ ++ L + YG T N I E + T+T
Sbjct: 98 YFDCNVIGTLNLISAISNLQKPIKLFFASSAAVYGQTTNSYISEEIVI------TET--- 148
Query: 260 PKQASSFYHLSKVHD 274
QA++ Y LSK D
Sbjct: 149 --QATNPYGLSKFLD 161
>sp|P45602|GALE_KLEPN UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE
PE=3 SV=1
Length = 139
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 37/139 (26%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLI---RRLFDHQLGLDSLTPIASIHDRLR 144
+V++ GG GY G T + L +G+EV I+D+L RR+ L
Sbjct: 2 KVLVTGGSGYIGSHTCVQLLQRGHEVVILDNLCNSKRRI-------------------LP 42
Query: 145 CWKSLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHF------GEQRSAPYSMIDRSRA 198
+ L GK GDI + ++E +AV+HF GE + P D
Sbjct: 43 VIERLGGKEATFIEGDIRNEARMTEILHDHAIEAVIHFAGLKAVGESVAKPLEYYD---- 98
Query: 199 VFTQHNNVIGTLNVLFAMK 217
NNV GTL ++ AM+
Sbjct: 99 -----NNVTGTLKLVSAMR 112
>sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii
GN=exoB PE=3 SV=1
Length = 327
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 89 VMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWKS 148
V+++GG GY G T L L+NKGY + D+ ++ H W
Sbjct: 6 VLVVGGAGYIGSHTCLDLANKGYRPVVFDNF-----------------SNGHREFVRW-- 46
Query: 149 LTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 208
G E GDI D L E +P A++HF S+ D V NNVIG
Sbjct: 47 --GPAEE---GDIRDRARLDEVLAKHKPAAILHFAALIEVGESVKD---PVSFYENNVIG 98
Query: 209 TLNVLFAMKEFRQECHLVKLGTMGEYGTP-NIDIEEGY--ITINHNGRT 254
TL +L A + V T YG P ++ ++E + + IN GRT
Sbjct: 99 TLTLLSAAQAAGINA-FVFSSTCATYGLPQSVPLDETHRQVPINPYGRT 146
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 88 RVMIIGGDGYCGWATALHLSNKGYEVAIVDSLIRRLFDHQLGLDSLTPIASIHDRLRCWK 147
RV++ GG GY G T + L G++V I+D+L S L +
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCN----------------SKRSVLPVIE 45
Query: 148 SLTGKNIELYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVI 207
L GK+ GDI + ++E D V+HF ++ S+ +R + NNV
Sbjct: 46 RLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESV---ARPLEYYDNNVN 102
Query: 208 GTLNVLFAMK 217
GTL ++ AM+
Sbjct: 103 GTLRLVSAMR 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,527,404
Number of Sequences: 539616
Number of extensions: 7434608
Number of successful extensions: 17120
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 16978
Number of HSP's gapped (non-prelim): 155
length of query: 479
length of database: 191,569,459
effective HSP length: 121
effective length of query: 358
effective length of database: 126,275,923
effective search space: 45206780434
effective search space used: 45206780434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)