BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011708
(479 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 182/381 (47%), Gaps = 67/381 (17%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
LSD G IG L + E G
Sbjct: 180 R-----------------------HLSDVG------IGHLAGMTRSAAE----------G 200
Query: 275 LTNLESLNLDSC-GIGDEGLVNLT-GLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNL 331
LE L L C + D L +++ GLT L +NLSF G ISD L L+ + SL+SLNL
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNL 260
Query: 332 DA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-RNFKNLRSLEICGGGLTD 386
+ I+DTG+ A+ SL L+ LD+ F ++ D AY+ + L+SL +C ++D
Sbjct: 261 RSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISD 319
Query: 387 AGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSN-SRITSAGLRHLKP 443
G+ + ++ + L LN+ Q +TDK LELI+ L+ L +++ +RIT GL +
Sbjct: 320 DGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQ 379
Query: 444 LKNLRSLTLESCKVTANDIKR 464
L L+ L L ++T ++ R
Sbjct: 380 LPCLKVLNLGLWQMTDSEKVR 400
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 175/335 (52%), Gaps = 48/335 (14%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVN 295
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLTHL 353
+ +R++ G L++LN+ +ITD GL + L+ LT +
Sbjct: 325 M--------------------VRQMHG---LRTLNIGQCVRITDKGLELIAEHLSQLTGI 361
Query: 354 DLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 387
DL+G RIT G + L+ L + +TD+
Sbjct: 362 DLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 44/263 (16%)
Query: 224 LSALGSLFYLNLNRC-QLSDDGCEK--FSKIGSLKVLNLGF-NEITDECLVHL-KGLTNL 278
+ + ++ LNL+ C L+D+G +IGSL+ LNL +ITD L + + L L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 279 ESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQIT 337
E L L C N++ TG+ L GL LKSLNL + R ++
Sbjct: 146 EVLELGGCS------------------NITNTGL----LLIAWGLQRLKSLNLRSCRHLS 183
Query: 338 DTGLAALTSLT--------GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLT 385
D G+ L +T GL L L ++TD ++ R LR +L CGG ++
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG-IS 242
Query: 386 DAGVKHIKDLSSLTLLNLSQNCNLTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-K 442
DAG+ H+ + SL LNL N++D + L G L L+VS ++ L ++ +
Sbjct: 243 DAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ 302
Query: 443 PLKNLRSLTLESCKVTANDIKRL 465
L L+SL+L SC ++ + I R+
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRM 325
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 182/381 (47%), Gaps = 67/381 (17%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
LSD G IG L + E G
Sbjct: 180 R-----------------------HLSDVG------IGHLAGMTRSAAE----------G 200
Query: 275 LTNLESLNLDSC-GIGDEGLVNLT-GLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNL 331
LE L L C + D L +++ GLT L +NLSF G ISD L L+ + SL+SLNL
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNL 260
Query: 332 DA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-RNFKNLRSLEICGGGLTD 386
+ I+DTG+ A+ SL L+ LD+ F ++ D AY+ + L+SL +C ++D
Sbjct: 261 RSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISD 319
Query: 387 AGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSN-SRITSAGLRHLKP 443
G+ + ++ + L LN+ Q +TDK LELI+ L+ L +++ +RIT GL +
Sbjct: 320 DGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQ 379
Query: 444 LKNLRSLTLESCKVTANDIKR 464
L L+ L L ++T ++ R
Sbjct: 380 LPCLKVLNLGLWQMTDSEKVR 400
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 175/335 (52%), Gaps = 48/335 (14%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVN 295
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLTHL 353
+ +R++ G L++LN+ +ITD GL + L+ LT +
Sbjct: 325 M--------------------VRQMHG---LRTLNIGQCVRITDKGLELIAEHLSQLTGI 361
Query: 354 DLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDA 387
DL+G RIT G + L+ L + +TD+
Sbjct: 362 DLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDS 396
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 44/263 (16%)
Query: 224 LSALGSLFYLNLNRC-QLSDDGCEK--FSKIGSLKVLNLGF-NEITDECLVHL-KGLTNL 278
+ + ++ LNL+ C L+D+G +IGSL+ LNL +ITD L + + L L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 279 ESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDA-RQIT 337
E L L C N++ TG+ L GL LKSLNL + R ++
Sbjct: 146 EVLELGGCS------------------NITNTGL----LLIAWGLQRLKSLNLRSCRHLS 183
Query: 338 DTGLAALTSLT--------GLTHLDLFG-ARITDSGAAYL-RNFKNLR--SLEICGGGLT 385
D G+ L +T GL L L ++TD ++ R LR +L CGG ++
Sbjct: 184 DVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG-IS 242
Query: 386 DAGVKHIKDLSSLTLLNLSQNCNLTDK-TLELISGLTGLVSLNVSN-SRITSAGLRHL-K 442
DAG+ H+ + SL LNL N++D + L G L L+VS ++ L ++ +
Sbjct: 243 DAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ 302
Query: 443 PLKNLRSLTLESCKVTANDIKRL 465
L L+SL+L SC ++ + I R+
Sbjct: 303 GLDGLKSLSLCSCHISDDGINRM 325
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 186/396 (46%), Gaps = 69/396 (17%)
Query: 103 RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHG---GLVNLKGLMKLES 159
RG+ + LS RR+ + QGM N+ L+L C + G ++ + L +
Sbjct: 68 RGIRRVQILSLRRSLSYVIQGMA------NIESLNLSGCYNLTDNGLGHAFVQEIGSLRA 121
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQI----SCSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LN+ C ITDS + ++ LK L++ CS +T++G+ + GLQ+L LNL C
Sbjct: 122 LNLSLCKQITDSSLGRIA--QYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSC 179
Query: 215 PVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKG 274
LSD G IG L + E G
Sbjct: 180 R-----------------------HLSDVG------IGHLAGMTRSAAE----------G 200
Query: 275 LTNLESLNLDSC-GIGDEGLVNLT-GLTNLESINLSFTG-ISDGSLRKLAGLSSLKSLNL 331
LE L L C + D L +++ GLT L +NLSF G ISD L L+ + SL+SLNL
Sbjct: 201 CLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNL 260
Query: 332 DA-RQITDTGLA--ALTSLTGLTHLDL-FGARITDSGAAYL-RNFKNLRSLEICGGGLTD 386
+ I+DTG+ A+ SL L+ LD+ F ++ D AY+ + L+SL +C ++D
Sbjct: 261 RSCDNISDTGIMHLAMGSLR-LSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISD 319
Query: 387 AGV-KHIKDLSSLTLLNLSQNCNLTDKTLELIS-GLTGLVSLNVSN-SRITSAGLRHLKP 443
G+ + ++ + L LN+ Q +TDK LELI+ L+ L +++ +RIT GL +
Sbjct: 320 DGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQ 379
Query: 444 LKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFRPE 479
L L+ L L ++T D ++ D L + R
Sbjct: 380 LPCLKVLNLGLWQMT--DSEKEARGDFSPLFTVRTR 413
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 179/346 (51%), Gaps = 48/346 (13%)
Query: 77 LKDCSNLQSLDFNFCIQISDGGLEH--LRGLSNLTSLSFRRNNAITAQGMKAFAGLIN-L 133
++ +N++SL+ + C ++D GL H ++ + +L +L+ IT + A + L
Sbjct: 86 IQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGL 145
Query: 134 VKLDLERCTRIH--GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTN--------LK 183
L+L C+ I G L+ GL +L+SLN++ C ++D + L+G+T L+
Sbjct: 146 EVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLE 205
Query: 184 SLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSALGSLFYLNLNRC-Q 239
L + C K+TD + ++ +GL L LLNL C ++ A L LS +GSL LNL C
Sbjct: 206 QLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDN 265
Query: 240 LSDDGCEKFSKIGSLKV--LNLGF-NEITDECLVHL-KGLTNLESLNLDSCGIGDEGLVN 295
+SD G + +GSL++ L++ F +++ D+ L ++ +GL L+SL+L SC I D+G+
Sbjct: 266 ISDTGIMHLA-MGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINR 324
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTS-LTGLTHL 353
+ +R++ G L++LN+ +ITD GL + L+ LT +
Sbjct: 325 M--------------------VRQMHG---LRTLNIGQCVRITDKGLELIAEHLSQLTGI 361
Query: 354 DLFG-ARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 398
DL+G RIT G + L+ L + +TD+ + D S L
Sbjct: 362 DLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPL 407
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 29/204 (14%)
Query: 69 VTDSGLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAF 127
+TD L H+ + + L+ L+ +FC ISD GL HL + +L SL+ R + I+ G+
Sbjct: 215 LTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHL 274
Query: 128 A-GLINLVKLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLSGLTNLKS 184
A G + L LD+ C ++ + +GL L+SL++ C+ D + + + L++
Sbjct: 275 AMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRT 334
Query: 185 LQI-SCSKVTDSGIAYL-KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
L I C ++TD G+ + + L +LT ++L GC +++
Sbjct: 335 LNIGQCVRITDKGLELIAEHLSQLTGIDLYGCT-----------------------RITK 371
Query: 243 DGCEKFSKIGSLKVLNLGFNEITD 266
G E+ +++ LKVLNLG ++TD
Sbjct: 372 RGLERITQLPCLKVLNLGLWQMTD 395
>sp|Q723K6|INLA_LISMF Internalin-A OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlA PE=3 SV=1
Length = 800
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 172/349 (49%), Gaps = 52/349 (14%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L LSNLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLSNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EG 292
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISP 312
Query: 293 LVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKS---LNLDARQITDTGLAALTSLTG 349
L LT LTNLE +++ L ++ +S+LK+ L L I+D ++ ++SLT
Sbjct: 313 LAGLTALTNLE--------LNENQLEDISPISNLKNLTYLTLYFNNISD--ISPVSSLTK 362
Query: 350 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 398
L L + +++D + L N N+ L AG I DL+ L
Sbjct: 363 LQRLFFYNNKVSDVSS--LANLTNINWLS--------AGHNQISDLTPL 401
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 151/335 (45%), Gaps = 72/335 (21%)
Query: 121 AQGMKAFAGLINLV----KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
A+ MK G N+ + DL++ T + + +K + LE LN
Sbjct: 54 AEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLN--------------- 98
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
NL + S +++TD I LK L KL +D L +N
Sbjct: 99 ----NLTQINFSNNQLTD--ITPLKDLTKL--------------VDIL----------MN 128
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
Q++D + + +L L L N+ITD + LK LTNL L L S I D + L
Sbjct: 129 NNQIAD--ITPLANLSNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISD--ISAL 182
Query: 297 TGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 356
+GLT+L+ LSF G L+ LA L++L+ L++ + +++D ++ L LT L L
Sbjct: 183 SGLTSLQQ--LSF-GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIAT 237
Query: 357 GARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLEL 416
+I+D L NL L + G L D G + L++LT L+L+ N L
Sbjct: 238 NNQISD--ITPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQ---ISNLAP 290
Query: 417 ISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLT 451
+SGLT L L + ++I+ ++ PL L +LT
Sbjct: 291 LSGLTKLTELKLGANQIS-----NISPLAGLTALT 320
>sp|G2K3G6|INLA_LISM4 Internalin-A OS=Listeria monocytogenes serotype 1/2a (strain
10403S) GN=inlA PE=3 SV=1
Length = 800
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 172/349 (49%), Gaps = 52/349 (14%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
++L ++ S + +TD + LKD + L + N QI+D + L L+NLT L+ N
Sbjct: 98 NNLTQINFSNNQLTD--ITPLKDLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-N 151
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
N IT + L NL +L+L T + L GL L+ L+ N +TD +KPL
Sbjct: 152 NQIT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF--GNQVTD--LKPL 203
Query: 177 SGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYL 233
+ LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L
Sbjct: 204 ANLTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDEL 256
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EG 292
+LN QL D G + + +L L+L N+I++ L L GLT L L L + I +
Sbjct: 257 SLNGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISP 312
Query: 293 LVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKS---LNLDARQITDTGLAALTSLTG 349
L LT LTNLE +++ L ++ +S+LK+ L L I+D ++ ++SLT
Sbjct: 313 LAGLTALTNLE--------LNENQLEDISPISNLKNLTYLTLYFNNISD--ISPVSSLTK 362
Query: 350 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 398
L L + +++D + L N N+ L AG I DL+ L
Sbjct: 363 LQRLFFYNNKVSDVSS--LANLTNINWLS--------AGHNQISDLTPL 401
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 162/365 (44%), Gaps = 72/365 (19%)
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLV----KLDLERCTRIHG 146
I S+G ++ T ++ +A A+ MK G N+ + DL++ T +
Sbjct: 24 WINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQA 83
Query: 147 GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
+ +K + LE LN NL + S +++TD I LK L KL
Sbjct: 84 DRLGIKSIDGLEYLN-------------------NLTQINFSNNQLTD--ITPLKDLTKL 122
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
+D L +N Q++D + + +L L L N+ITD
Sbjct: 123 --------------VDIL----------MNNNQIAD--ITPLANLTNLTGLTLFNNQITD 156
Query: 267 ECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSL 326
+ LK LTNL L L S I D + L+GLTNL+ LSF G L+ LA L++L
Sbjct: 157 --IDPLKNLTNLNRLELSSNTISD--ISALSGLTNLQQ--LSF-GNQVTDLKPLANLTTL 209
Query: 327 KSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD 386
+ L++ + +++D ++ L LT L L +I+D L NL L + G L D
Sbjct: 210 ERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQLKD 265
Query: 387 AGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKN 446
G + L++LT L+L+ N L +SGLT L L + ++I+ ++ PL
Sbjct: 266 IGT--LASLTNLTDLDLANNQ---ISNLAPLSGLTKLTELKLGANQIS-----NISPLAG 315
Query: 447 LRSLT 451
L +LT
Sbjct: 316 LTALT 320
>sp|P0DJM0|INLA_LISMO Internalin-A OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlA PE=1 SV=1
Length = 800
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 52/347 (14%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNA 118
L ++ S + +TD + LK+ + L + N QI+D + L L+NLT L+ NN
Sbjct: 100 LTQINFSNNQLTD--ITPLKNLTKLVDILMNNN-QIAD--ITPLANLTNLTGLTLF-NNQ 153
Query: 119 ITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
IT + L NL +L+L T + L GL L+ L+ N +TD +KPL+
Sbjct: 154 IT--DIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF--GNQVTD--LKPLAN 205
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALG---SLFYLNL 235
LT L+ L IS +KV+D + L KLT NLE T + ++ LG +L L+L
Sbjct: 206 LTTLERLDISSNKVSDISV-----LAKLT--NLESLIATNNQISDITPLGILTNLDELSL 258
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD-EGLV 294
N QL D G + + +L L+L N+I++ L L GLT L L L + I + L
Sbjct: 259 NGNQLKDIGT--LASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPLA 314
Query: 295 NLTGLTNLESINLSFTGISDGSLRKLAGLSSLKS---LNLDARQITDTGLAALTSLTGLT 351
LT LTNLE +++ L ++ +S+LK+ L L I+D ++ ++SLT L
Sbjct: 315 GLTALTNLE--------LNENQLEDISPISNLKNLTYLTLYFNNISD--ISPVSSLTKLQ 364
Query: 352 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSL 398
L + +++D + L N N+ L AG I DL+ L
Sbjct: 365 RLFFYNNKVSD--VSSLANLTNINWLS--------AGHNQISDLTPL 401
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 126/256 (49%), Gaps = 28/256 (10%)
Query: 196 GIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLK 255
G+ YL L ++ N + +T L L L + +N Q++D + + +L
Sbjct: 93 GVEYLNNLTQINFSNNQLTDITP-----LKNLTKLVDILMNNNQIAD--ITPLANLTNLT 145
Query: 256 VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDG 315
L L N+ITD + LK LTNL L L S I D + L+GLT+L+ LSF G
Sbjct: 146 GLTLFNNQITD--IDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQ--LSF-GNQVT 198
Query: 316 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 375
L+ LA L++L+ L++ + +++D ++ L LT L L +I+D L NL
Sbjct: 199 DLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD--ITPLGILTNLD 254
Query: 376 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITS 435
L + G L D G + L++LT L+L+ N L +SGLT L L + ++I+
Sbjct: 255 ELSLNGNQLKDIGT--LASLTNLTDLDLANNQ---ISNLAPLSGLTKLTELKLGANQIS- 308
Query: 436 AGLRHLKPLKNLRSLT 451
++ PL L +LT
Sbjct: 309 ----NISPLAGLTALT 320
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 195/429 (45%), Gaps = 70/429 (16%)
Query: 33 LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHL-KDCSNLQSLDFNFC 91
LQ+L + P D+ M I+ +L ++LS + +T+ + L + NLQ+L +C
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 92 IQISDGGLEHLR---GLSNLTSLSFRRNNAITAQGMKAFA----GLINL----------- 133
+ +D GL++L G L L I+ QG + A G+++L
Sbjct: 307 RRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDN 366
Query: 134 -VKLDLERCTRI---------HGGLVNLKGL--MKLESLNIKWCNCITDSDMKPL-SGLT 180
VK +E+C+RI H + L KL + + +TD+ K +
Sbjct: 367 CVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYP 426
Query: 181 NLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTA-----ACLDSLSALGSLFYLN 234
NL + ++ C +TDS + L L++LT+LNL C LD +++ + LN
Sbjct: 427 NLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASM-RIRELN 485
Query: 235 LNRC-QLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC-GIGDEG 292
L+ C +LSD K S + C NL L+L +C + +G
Sbjct: 486 LSNCVRLSDASVMKLS----------------ERC-------PNLNYLSLRNCEHLTAQG 522
Query: 293 LVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAAL-TSLTGL 350
+ + + +L SI+LS T IS+ L L+ LK L++ + +ITD G+ A S L
Sbjct: 523 IGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLIL 582
Query: 351 THLDL-FGARITDSGAAYLRNF-KNLRSLEICG-GGLTDAGVKHIK-DLSSLTLLNLSQN 406
HLD+ + ++++D L + NL SL I G +TD+ ++ + L +L++S
Sbjct: 583 EHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGC 642
Query: 407 CNLTDKTLE 415
LTD+ LE
Sbjct: 643 VLLTDQILE 651
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 83 LQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERC 141
++ L+ + C+++SD + L NL LS R +TAQG+ + +LV +DL
Sbjct: 481 IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT 540
Query: 142 TRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL--SGLTNLKSLQIS-CSKVTDSGIA 198
+ GL L KL+ L++ C ITD ++ S L L+ L +S CS+++D I
Sbjct: 541 DISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLI-LEHLDVSYCSQLSDMIIK 599
Query: 199 YLK-GLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRCQLSDDGCEKFSKIG--S 253
L LT L++ GCP +T + ++ LSA L L+++ C L D + +IG
Sbjct: 600 ALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQ 659
Query: 254 LKVLNLGF 261
L++L + +
Sbjct: 660 LRILKMQY 667
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL+S+DLSG+D+++ GL L L+ L + C +I+D G++ +F +++
Sbjct: 531 SLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQ-----------AFCKSS 579
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGL--MKLESLNIKWCNCITDSDMKP 175
I L LD+ C+++ ++ + + L SL+I C ITDS M+
Sbjct: 580 LI-------------LEHLDVSYCSQLSDMIIKALAIYCINLTSLSIAGCPKITDSAMEM 626
Query: 176 LSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGC 214
LS + L L IS C +TD + L+ G ++L +L ++ C
Sbjct: 627 LSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYC 668
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 21/284 (7%)
Query: 209 LNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV--LNLGFNEITD 266
LN GC + S+S +L LN++ C D + G V LNL IT+
Sbjct: 226 LNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITN 285
Query: 267 ECLVHL-KGLTNLESLNLDSC-GIGDEGLVNL---TGLTNLESINLS-FTGISDGSLRKL 320
+ L + NL++L+L C D+GL L G L ++LS T IS R +
Sbjct: 286 RTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYI 345
Query: 321 A-GLSSLKSLNL-DARQITDTGLAALTS-LTGLTHLDLFGA-RITDSGAAYLRNFKNLRS 376
A + + L + D +TD + AL + +T L GA I+D L K LR
Sbjct: 346 ANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACK-LRK 404
Query: 377 LEICGGG-LTDAGVKHI-KDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS-RI 433
+ G +TDA K I K+ +L+ + ++ +TD +L +S L L LN++N RI
Sbjct: 405 IRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRI 464
Query: 434 TSAGLRHL---KPLKNLRSLTLESC-KVTANDIKRLQSRDLPNL 473
GL+ +R L L +C +++ + +L R PNL
Sbjct: 465 GDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSER-CPNL 507
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 182/420 (43%), Gaps = 62/420 (14%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
L S+ L ++VTD L + L+ LD + C +I+D L + G+ +L LS
Sbjct: 231 QLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGCW 288
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS 177
+T +G++ NL +LD+ C + G V LK L+ L+ L++ NC D+ L
Sbjct: 289 NVT-KGLEELCKFSNLRELDISGCL-VLGSAVVLKNLINLKVLSVS--NCKNFKDLNGLE 344
Query: 178 GLTNLKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLN 236
L NL+ L +S C V S + ++ L L L++ GC + C D L L +L L L
Sbjct: 345 RLVNLEKLNLSGCHGV--SSLGFVANLSNLKELDISGCE-SLVCFDGLQDLNNLEVLYLR 401
Query: 237 RCQLSDDGCEKFSKIGSLKVLNL-------GFNEITDECLVHLKGLTNLESLNLDSCGIG 289
+ F+ +G++K L+ G IT L L+ L LE L+L+ CG
Sbjct: 402 DVK-------SFTNVGAIKNLSKMRELDLSGCERITS--LSGLETLKGLEELSLEGCG-- 450
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLN----LDARQITDTG----- 340
+++ + +L + + + G+L L+GL L L R+ T+ G
Sbjct: 451 --EIMSFDPIWSLYHLRVLYVS-ECGNLEDLSGLQCLTGLEEMYLHGCRKCTNFGPIWNL 507
Query: 341 ----------------LAALTSLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICG-G 382
L+ L LTGL L L G IT G + N +NL+ L C
Sbjct: 508 RNVCVLELSCCENLDDLSGLQCLTGLEELYLIGCEEITTIGV--VGNLRNLKCLSTCWCA 565
Query: 383 GLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLK 442
L + G ++ L +L L+LS C L+ + L L SR+ L+ LK
Sbjct: 566 NLKELG--GLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQWFYGFGSRVPDIVLKELK 623
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 200/441 (45%), Gaps = 73/441 (16%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--------- 116
GS++ D L L+D L+ LD + C + L + L NL L +R
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 117 ----------NAITAQGMKAFAGLINLVKLD---LERCTRIHGGLVNLKGLMKLESLNIK 163
++G+ GL L L+ L+ C I G + L +L SL++
Sbjct: 179 IGLLKFLVHLEVDGSRGVTDITGLFRLKTLEALSLDNCINITKGFDKICALPQLTSLSLC 238
Query: 164 WCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N +TD D++ + LK L I SC ++TD + + G++ L L+L GC L+
Sbjct: 239 QTN-VTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRSLEKLSLSGCWNVTKGLE 295
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNL 278
L +L L+++ C + + +LKVL++ F ++ L+ L NL
Sbjct: 296 ELCKFSNLRELDISGCLVLGSAV-VLKNLINLKVLSVSNCKNFKDLNG-----LERLVNL 349
Query: 279 ESLNLDSC-GIGDEGLVNLTGLTNLESINLS-------FTGISDGSLRKLAGLSSLKSLN 330
E LNL C G+ G V L+NL+ +++S F G+ D L++L+ L
Sbjct: 350 EKLNLSGCHGVSSLGFV--ANLSNLKELDISGCESLVCFDGLQD--------LNNLEVLY 399
Query: 331 L-DARQITDTGLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDA 387
L D + T+ G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++
Sbjct: 400 LRDVKSFTNVG--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS-- 454
Query: 388 GVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNL 447
I L L +L +S+ NL D L + LTGL + + R + + P+ NL
Sbjct: 455 -FDPIWSLYHLRVLYVSECGNLED--LSGLQCLTGLEEMYLHGCRKCT----NFGPIWNL 507
Query: 448 RSL-TLE-SCKVTANDIKRLQ 466
R++ LE SC +D+ LQ
Sbjct: 508 RNVCVLELSCCENLDDLSGLQ 528
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 249 SKIGSLKVLNLGF--NEITDECLVHLKGLTNLESLNLDSCGIGD--EGLVNLTGLTNLES 304
SK G K+LNL +E+ D L L+ L LE L+L C + E +V LT L NL
Sbjct: 107 SKNGRWKILNLSGCGSELQD--LTALRDLEALEDLDLSECANLELRELMVVLT-LRNLRK 163
Query: 305 INLSFTGISDGSLRKLAGLSSLKSLNLD-ARQITD-TGLAALTSLTGLTHLDLFGARITD 362
+ + T ++D + L L L +D +R +TD TGL L +L L+ L
Sbjct: 164 LRMKRTMVNDMWCSSIGLLKFLVHLEVDGSRGVTDITGLFRLKTLEALS---LDNCINIT 220
Query: 363 SGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTG 422
G + L SL +C +TD ++ I L +L++S +TD L I G+
Sbjct: 221 KGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDISSCHEITD--LTAIGGVRS 278
Query: 423 LVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 462
L L++S + GL L NLR L + C V + +
Sbjct: 279 LEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAV 318
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 199/441 (45%), Gaps = 73/441 (16%)
Query: 66 GSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN--------- 116
GS++ D L L+D L+ LD + C + L + L NL L +R
Sbjct: 121 GSELQD--LTALRDLEALEDLDLSECANLELRELMVVLTLRNLRKLRMKRTMVNDMWCSS 178
Query: 117 ----------NAITAQGMKAFAGLINLVKLD---LERCTRIHGGLVNLKGLMKLESLNIK 163
++G+ GL L L+ L+ C I G + L +L SL++
Sbjct: 179 IGLLKFLVHLEVDGSRGVTDITGLCRLKTLEALSLDSCINITKGFDKICALPQLTSLSLC 238
Query: 164 WCNCITDSDMKPLSGLTNLKSLQI-SCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
N +TD D++ + LK L+ SC ++TD + + G++ L L+L GC L+
Sbjct: 239 QTN-VTDKDLRCIHPDGKLKVLRYSSCHEITD--LTAIGGMRSLEKLSLSGCWNVTKGLE 295
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNL 278
L +L L+++ C + + +LKVL++ F ++ L+ L NL
Sbjct: 296 ELCKFSNLRELDISGCLVLGSAV-VLKNLINLKVLSVSNCKNFKDLNG-----LERLVNL 349
Query: 279 ESLNLDSC-GIGDEGLVNLTGLTNLESINLS-------FTGISDGSLRKLAGLSSLKSLN 330
+ LNL C G+ G V L+NL+ +++S F G+ D L++L+ L
Sbjct: 350 DKLNLSGCHGVSSLGFV--ANLSNLKELDISGCESLVCFDGLQD--------LNNLEVLY 399
Query: 331 L-DARQITDTGLAALTSLTGLTHLDLFGA-RITD-SGAAYLRNFKNLRSLEICGGGLTDA 387
L D + T+ G A+ +L+ + LDL G RIT SG L+ + L SLE CG ++
Sbjct: 400 LRDVKSFTNVG--AIKNLSKMRELDLSGCERITSLSGLETLKGLEEL-SLEGCGEIMS-- 454
Query: 388 GVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNL 447
I L L +L +S+ NL D L + G+TGL L + R + + P+ NL
Sbjct: 455 -FDPIWSLHHLRVLYVSECGNLED--LSGLEGITGLEELYLHGCRKCT----NFGPIWNL 507
Query: 448 RSLTLE--SCKVTANDIKRLQ 466
R++ + SC D+ LQ
Sbjct: 508 RNVCVVELSCCENLEDLSGLQ 528
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 165/397 (41%), Gaps = 63/397 (15%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
SL + LSG GL L SNL+ LD + C+ + G L+ L NL LS +N
Sbjct: 278 SLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVL--GSAVVLKNLINLKVLSV--SN 333
Query: 118 AITAQGMKAFAGLINLVKLDLERCTRIHG--GLVNLKGLMKLESLNIKWCNCITDSDMKP 175
+ + L+NL KL+L C HG L + L L+ L+I C + D
Sbjct: 334 CKNFKDLNGLERLVNLDKLNLSGC---HGVSSLGFVANLSNLKELDISGCESLVCFD--G 388
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L NL+ L + K + + + +K L K+ L+L GC + SLS L +L L
Sbjct: 389 LQDLNNLEVLYLRDVK-SFTNVGAIKNLSKMRELDLSGCER----ITSLSGLETLKGLE- 442
Query: 236 NRCQLSDDGCEK---FSKIGSLKVLNLGFNEITDEC-----LVHLKGLTNLESLNLDSCG 287
+LS +GC + F I SL L + + EC L L+G+T LE L L C
Sbjct: 443 ---ELSLEGCGEIMSFDPIWSLHHLRVLY---VSECGNLEDLSGLEGITGLEELYLHGC- 495
Query: 288 IGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 347
N + NL ++ + LS ++L L+ L L
Sbjct: 496 ---RKCTNFGPIWNLRNVC-------------VVELSCCENLE---------DLSGLQCL 530
Query: 348 TGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQ 405
TGL L L G IT G + N +NL+ L C L + G + L +L L+LS
Sbjct: 531 TGLEELYLIGCEEITPIGV--VGNLRNLKCLSTCWCANLKELG--GLDRLVNLEKLDLSG 586
Query: 406 NCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLK 442
C L+ + L L SR+ L LK
Sbjct: 587 CCGLSSSVFMELMSLPKLQWFYGFGSRVPDIVLEELK 623
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 249 SKIGSLKVLNLGF--NEITDECLVHLKGLTNLESLNLDSCGIGD--EGLVNLTGLTNLES 304
SK G K+LNL +E+ D L L+ L LE L+L C + E +V LT L NL
Sbjct: 107 SKNGRWKILNLSGCGSELQD--LTALRDLEALEDLDLSECANLELRELMVVLT-LRNLRK 163
Query: 305 INLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSG 364
+ + T ++D + L L L +D G +T +TGL L A DS
Sbjct: 164 LRMKRTMVNDMWCSSIGLLKFLVHLEVD-------GSRGVTDITGLCRLKTLEALSLDSC 216
Query: 365 AAYLRNF------KNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELIS 418
+ F L SL +C +TD ++ I L +L S +TD L I
Sbjct: 217 INITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLRYSSCHEITD--LTAIG 274
Query: 419 GLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDI 462
G+ L L++S + GL L NLR L + C V + +
Sbjct: 275 GMRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAV 318
>sp|A0N0X6|LRRN1_BOVIN Leucine-rich repeat neuronal protein 1 OS=Bos taurus GN=LRRN1 PE=3
SV=1
Length = 716
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 141/322 (43%), Gaps = 20/322 (6%)
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
R TRI L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPSNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLA- 116
Query: 200 LKGLQKLTLLNLEGCPVTA---ACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKV 256
L +LT L+LE +T CL LS L L+ +N Q+S FS + +L
Sbjct: 117 --NLTQLTTLHLEENQITEMNDYCLQDLSNLQELY---INHNQISTISANAFSGLKNLLR 171
Query: 257 LNLGFNEITDECLVHLKGLTNLESLNL---DSCGIGDEGLVNLTGLTNLESINLSFTGIS 313
L+L N++ NLE L + GI D +N L+NL S+ L+ ++
Sbjct: 172 LHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILD---MNFKPLSNLRSLVLAGMYLT 228
Query: 314 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 373
D L GL SL+SL+ ++ AL + L LDL I +N
Sbjct: 229 DIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLR 288
Query: 374 LRSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSR 432
L+ L I G L + +L LT L + N L+ + L SL ++N+
Sbjct: 289 LKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNA 348
Query: 433 ITSAGLRHLKPLKNLRSLTLES 454
+ + + ++ L NLR +++ S
Sbjct: 349 LNAVYQKTVESLPNLREISIHS 370
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 112/283 (39%), Gaps = 72/283 (25%)
Query: 57 SSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRN 116
+ L ++ L + +T+ L+D SNLQ L N +
Sbjct: 119 TQLTTLHLEENQITEMNDYCLQDLSNLQELYIN--------------------------H 152
Query: 117 NAITAQGMKAFAGLINLVKLDLERC------TRIHGGLVNLKGLMKLESLNIKWCNCITD 170
N I+ AF+GL NL++L L +R NL+ LM E+ I I D
Sbjct: 153 NQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG----ILD 208
Query: 171 SDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSL 230
+ KPLS NL+SL ++ +TD L G LDSL +L
Sbjct: 209 MNFKPLS---NLRSLVLAGMYLTDIPGNALVG------------------LDSLESLS-- 245
Query: 231 FYLN--LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG- 287
FY N + QL+ K+ +LK L+L N I K + L+ L +++ G
Sbjct: 246 FYDNKLVKVPQLA------LQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGE 299
Query: 288 ---IGDEGLVNLTGLTNLESI-NLSFTGISDGSLRKLAGLSSL 326
+ L NL LT LE+ N + I + R + L SL
Sbjct: 300 LVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESL 342
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 28/168 (16%)
Query: 291 EGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 350
+ L L LT L+ +FT I + L A L+ L +L+L+ QIT+ L L+ L
Sbjct: 89 DELQQLFNLTELDFSQNNFTNIKEVGL---ANLTQLTTLHLEENQITEMNDYCLQDLSNL 145
Query: 351 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT 410
L + +I+ A KNL L + L + +L +L + +N
Sbjct: 146 QELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN---- 201
Query: 411 DKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 458
+ G++ +N KPL NLRSL L +T
Sbjct: 202 --------PVIGILDMN-------------FKPLSNLRSLVLAGMYLT 228
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 162/351 (46%), Gaps = 57/351 (16%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK--IGSLKVLNLGFNEITDEC 268
C +T + L +S L YLNL+ C Q++ DG E + G +L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLT-GLTNLESINLSFTG-ISDGSLRKLAGLS 324
L H++ + L SLNL SC + D+G+V L G L+++ LS G ++D SL LA
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALA--- 256
Query: 325 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL-RNFKNLRSLE----- 378
LN QI + + +TD+G L RN +L ++
Sbjct: 257 ----LNCPRLQILEAARCS---------------HLTDAGFTLLARNCHDLEKMDLEECI 297
Query: 379 -ICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT--DKTLELISGLTG---LVSLNVSNSR 432
I LT + H L +L+L +C L D L L + G L L + N
Sbjct: 298 LITDRTLTQLSI-HCPKLQALSL----SHCELITDDGILHLSNSPCGHERLRVLELDNCL 352
Query: 433 -ITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQSRDLPNL---VSFRP 478
IT L HL+ + L L L C +VT IKR++++ LP++ F P
Sbjct: 353 LITDVALEHLEHCRGLERLELYDCQQVTRAGIKRMRAQ-LPHVRVHAYFAP 402
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 136/337 (40%), Gaps = 76/337 (22%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G L++L +
Sbjct: 153 ---------------EGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGC-PVTAACLDSLSA 226
SCS+VTD G+ L +G +L L L GC +T A L +L+
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALAL 257
Query: 227 -LGSLFYLNLNRC-QLSDDG-------CEKFSKIGSLKVLNLGFNEITDECLVHLK-GLT 276
L L RC L+D G C K+ + + ITD L L
Sbjct: 258 NCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECI-----LITDRTLTQLSIHCP 312
Query: 277 NLESLNLDSCG-IGDEGLVNLT----GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLN 330
L++L+L C I D+G+++L+ G L + L + I+D +L L L+ L
Sbjct: 313 KLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVALEHLEHCRGLERLE 372
Query: 331 L-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 366
L D +Q+T G+ + + + + A +T AA
Sbjct: 373 LYDCQQVTRAGIKRMRAQLPHVRVHAYFAPVTPPTAA 409
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSGSD-VTDSGLIHLKD--CSN--LQSLDFNFCIQISDGG 98
+ D+ + ++ L ++ LS + +TD G++HL + C + L+ L+ + C+ I+D
Sbjct: 299 ITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDVA 358
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
LEHL L L +T G+K + V++
Sbjct: 359 LEHLEHCRGLERLELYDCQQVTRAGIKRMRAQLPHVRV 396
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 191/449 (42%), Gaps = 95/449 (21%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG---LM 155
+E L+ L NLTSL+ NN + L+NLV L+L + LVNL G L+
Sbjct: 175 IEGLQYLENLTSLNLSENN---ISDLAPLKDLVNLVSLNLSS----NRTLVNLSGVEDLV 227
Query: 156 KLESLNIKWCNCITD-SDMKPLSGLT-------NLKSLQI-------------------- 187
L+ LN+ + D S + L L N+K+L++
Sbjct: 228 NLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLPELETFYLQEND 287
Query: 188 -----SCSKVTDSGIAYLKGLQKL-TLLNLEGCP----VTAACLDSLSALGSLFYLN-LN 236
S +K+ Y+KG L +L L G + A+ L LG + L+ L
Sbjct: 288 LTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSELE 347
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH----LKGLTNLESLNLDSCGIGDEG 292
QLS GC K +I SLK L N D C + L L L++L L +E
Sbjct: 348 MIQLS--GCSKLKEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQTLVLSD----NEN 401
Query: 293 LVNLTGLTNLESIN-LSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLT 351
L N+T +T+L + L+ G S+ L L L+ L+L QI T ++ +T L L+
Sbjct: 402 LTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQI--TSISEITDLPRLS 459
Query: 352 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLS------- 404
+LD+ +T G L+ L L + L+D V + + SL +N+S
Sbjct: 460 YLDVSVNNLTTIGD--LKKLPLLEWLNVSSNRLSD--VSTLTNFPSLNYINISNNVIRTV 515
Query: 405 --------------QNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSL 450
QN +++D + +I + L ++ SN+ IT+ G L L+SL
Sbjct: 516 GKMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKVDASNNLITNIGT--FDNLPKLQSL 571
Query: 451 TLESCKVTANDIKRLQSRDLPNLVSFRPE 479
+ S ++T+ + DLP+L +F +
Sbjct: 572 DVHSNRITSTSV----IHDLPSLETFNAQ 596
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 151/345 (43%), Gaps = 72/345 (20%)
Query: 143 RIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKG 202
R G + L L + + N N I+D M + + NL+ + S + +T+ G
Sbjct: 513 RTVGKMTELPSLKEFYAQN----NSISDISM--IHDMPNLRKVDASNNLITNIGT--FDN 564
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFN 262
L KL L++ +T+ + + L SL N +++ G + L +NL FN
Sbjct: 565 LPKLQSLDVHSNRITSTSV--IHDLPSLETFNAQTNLITNIGT--MDNLPDLTYVNLSFN 620
Query: 263 EITDECLVHLKGLTNLESL-------NLDSCGIGDEGLVNLTGLTNLESINLSFTGISDG 315
I L + L NLE+L L S G D G+ L L +L++ L++TG ++G
Sbjct: 621 RI--PSLAPIGDLPNLETLIVSDNNSYLRSLGTMD-GVPKLRIL-DLQNNYLNYTG-TEG 675
Query: 316 SLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR 375
+L L+ L++L LNL D ++ L++L+ L +L+L +I D A L N NL+
Sbjct: 676 NLSSLSDLTNLTELNLRNNVYID-DISGLSTLSRLIYLNLDSNKIEDISA--LSNLTNLQ 732
Query: 376 SLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLN---VSNSR 432
L L + +E IS L+ L +LN VS ++
Sbjct: 733 EL------------------------------TLENNKIENISALSDLENLNKLVVSKNK 762
Query: 433 ITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 477
I + P+ N+ + VTA++ Q+ LP ++S++
Sbjct: 763 II-----DISPVANMVN---RGAIVTASN----QTYTLPTVLSYQ 795
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 154/384 (40%), Gaps = 13/384 (3%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLR-----GLSNLTSLSFRRNNAIT-AQGMKAFAGLINLV 134
NL SLDF + + L L GL NL L RN A G+ + +
Sbjct: 95 QNLSSLDF---LNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASL 151
Query: 135 KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTD 194
L R+ GL +GL L LN+ W + + D GL NL L ++ +K+T
Sbjct: 152 SLSSNLLGRLEEGL--FQGLSHLWDLNLGWNSLVVLPDTV-FQGLGNLHELVLAGNKLTY 208
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSL 254
A GL +L L+L + + + L L L L+R ++ F + +L
Sbjct: 209 LQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKAL 268
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISD 314
+ L+L N + GL L L L I L LE + L I
Sbjct: 269 RWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 315 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 374
R GL L+ L L+ QIT+ + A + L + ++L G + + L
Sbjct: 329 LGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKL 388
Query: 375 RSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 434
SL + L + LS L L L N +++ + ++GL+ L+ L+++ +R+T
Sbjct: 389 HSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN-SISSIEEQSLAGLSELLELDLTTNRLT 447
Query: 435 SAGLRHLKPLKNLRSLTLESCKVT 458
+ + L +L L L ++T
Sbjct: 448 HLPRQLFQGLGHLEYLLLSYNQLT 471
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 142/355 (40%), Gaps = 7/355 (1%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLES 159
+GLS+L L+ N+ + F GL NL +L L + T + L GL +L
Sbjct: 166 FQGLSHLWDLNLGWNSLVVLPD-TVFQGLGNLHELVLAGNKLTYLQPAL--FCGLGELRE 222
Query: 160 LNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAA 219
L++ N + L L+ L + + +T G++ L L+L V
Sbjct: 223 LDLS-RNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGL 281
Query: 220 CLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLE 279
D+ L L L L ++ F + L+ L LG N I +GL LE
Sbjct: 282 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 341
Query: 280 SLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDT 339
L L+ I + + +GL N+ +NLS + R GL L SL+L+ +
Sbjct: 342 VLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 401
Query: 340 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLT 399
L L+GL L L I+ L L L++ LT + + L L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLE 461
Query: 400 LLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 454
L LS N LT + E++ L L++S++ + + L +R L+L +
Sbjct: 462 YLLLSYN-QLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRN 515
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 142/364 (39%), Gaps = 21/364 (5%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER---CTRIHGGLVNLKGLMKLESL 160
GL L L RN A+ + F L L KL L+R G + +K L L+
Sbjct: 216 GLGELRELDLSRN-ALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLS 274
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ + + D+ GL L L+++ + + K L L L L +
Sbjct: 275 HNRVAGLMEDT----FPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLG 330
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+ LG L L LN Q+++ FS + ++ V+NL N + +GL L S
Sbjct: 331 ERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHS 390
Query: 281 LNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 340
L+L+ +G L GL+ L + L IS + LAGLS L L+L ++T
Sbjct: 391 LHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLP 450
Query: 341 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTL 400
L L +L L ++T A L + L+I L L +
Sbjct: 451 RQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRY 510
Query: 401 LNLSQNCNLTDKTLELISGLTGLVSLNV-SNSRITSAGLRHLKPLKNLRSLTLESCKVTA 459
L+L N +L+ S GL L + +N S PLK LR L++ V
Sbjct: 511 LSLRNN------SLQTFSPQPGLERLWLDANPWDCSC------PLKALRDFALQNPGVVP 558
Query: 460 NDIK 463
++
Sbjct: 559 RFVQ 562
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 122/322 (37%), Gaps = 50/322 (15%)
Query: 183 KSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSD 242
++L + + ++ A + L L LNL+G + + +L L +L+YL+L R +L +
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRN 136
Query: 243 DGCEKFSK------------------------IGSLKVLNLGFNEITDECLVHLKGLTNL 278
F+ + L LNLG+N + +GL NL
Sbjct: 137 LAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 279 ESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITD 338
L L + GL L ++LS + L L+ L LD IT
Sbjct: 197 HELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITA 256
Query: 339 TGLAALTSLTGLTHLDLFGARIT----DSGAAYL-----------------RNFKNLRSL 377
A + L LDL R+ D+ L R FK+L L
Sbjct: 257 VAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFL 316
Query: 378 EICGGG---LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 434
E G + G + + L L +L L+ N +T+ + SGL + +N+S + +
Sbjct: 317 EELQLGHNRIRQLGERTFEGLGQLEVLTLNDN-QITEVRVGAFSGLFNVAVMNLSGNCLR 375
Query: 435 SAGLRHLKPLKNLRSLTLE-SC 455
S R + L L SL LE SC
Sbjct: 376 SLPERVFQGLDKLHSLHLEHSC 397
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI++ + GL N+ ++ N + + + F GL L L LE H L
Sbjct: 349 QITEVRVGAFSGLFNVAVMNLS-GNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFA 407
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L L ++ N I+ + + L+GL+ L L ++ +++T +GL L L L
Sbjct: 408 GLSGLRRLFLR-DNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLS 466
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
+T + L L F+L+++ L FS +G ++ L+L N +
Sbjct: 467 YNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSL 518
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 230/508 (45%), Gaps = 79/508 (15%)
Query: 13 ELVYSRCLTEVSLEAFRD--CALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVT 70
E V S LT+ L A + +++L L P V+ + +A + +SL S+DL G V
Sbjct: 120 ENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVG 179
Query: 71 DSGLIHL-KDCSNLQSLDFNFCIQISD-GGLEHLRGLS-NLTSLSFRRNNAITAQGMKAF 127
D GL + K C L+ L+ FC ++D G ++ + G S +L S+ + IT ++A
Sbjct: 180 DQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAV 239
Query: 128 AG---LINLVKLDLERCTRIH-GGLVNL-KGLMKLESLNIKWCNCITDSDMKPLSGL-TN 181
L+ ++ LD E IH GL+ + +G +L++L ++ C +TD + L T+
Sbjct: 240 GSHCKLLEVLYLDSE---YIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTS 295
Query: 182 LKSLQI-SCSKVTDSGI-AYLKGLQKLTLLNLEGCP-VTAACLDSLS-ALGSLFYLNLNR 237
L+ L + S TD G+ A KG +KL L L C V+ L++++ L + +N
Sbjct: 296 LERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355
Query: 238 C--------QLSDDGCEKFSKIGSL---KVLNLGFNEITDEC----LVHL---------- 272
C + C + ++ L ++ N EI C ++HL
Sbjct: 356 CHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIA 415
Query: 273 -----KGLTNLESLNLDSC-GIGDEGLVNL-TGLTNLESINLSFT-GISDGSLRKLAGLS 324
KG NL+ L++ C IG++G++++ +L ++L F + + +L +
Sbjct: 416 MCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC 475
Query: 325 SLKSLNLDA-RQITDTGLAALT-SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG 382
SL+ LN+ QI+D G+ A+ LTHLD+ + L+N ++ E+ G
Sbjct: 476 SLQQLNVSGCNQISDAGITAIARGCPQLTHLDI----------SVLQNIGDMPLAELGEG 525
Query: 383 G--LTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRH 440
L D + H ++ L +L Q C L + T + V ITSAG+
Sbjct: 526 CPMLKDLVLSHCHHITDNGLNHLVQKCKLLE-TCHM-----------VYCPGITSAGVAT 573
Query: 441 -LKPLKNLRSLTLESCKVTANDIKRLQS 467
+ +++ + +E KVT +R S
Sbjct: 574 VVSSCPHIKKVLIEKWKVTERTTRRAGS 601
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 183/451 (40%), Gaps = 105/451 (23%)
Query: 99 LEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLE 158
+E L+ L NLTSL+ NN + L+NLV L+L R L ++GL+ L+
Sbjct: 172 IEGLQYLENLTSLNLSENN---ISDLAPIKDLVNLVSLNL-SSNRTLVNLSGVEGLVNLQ 227
Query: 159 SLNIKWCNCITD----------------------------------------------SD 172
LN+ + D +D
Sbjct: 228 ELNVSANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILPELETFYLQENDLTD 287
Query: 173 MKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFY 232
+ L+ L LK+L I + S +A LKG KL L++ C L++L + L
Sbjct: 288 LTSLAKLPKLKNLYIKGNASLKS-LATLKGATKLQLIDASNC----TDLETLGDISGLSE 342
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL------------------KG 274
L + QLS GC K +I SLK L N D C + K
Sbjct: 343 LEM--IQLS--GCSKLKEITSLKDLPNLVNITADSCAIEDLGTLNNLPKLQTLILSDNKD 398
Query: 275 LTN---------LESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSS 325
LTN L++L LD CGI G L L LE ++L ++ S+ ++ L
Sbjct: 399 LTNINAITDMPQLKTLALDGCGITSIG--TLDNLPKLEKLDLKENQLT--SISEINDLPR 454
Query: 326 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 385
L L++ +T G L L L L++ R++D + L NF +L + + +
Sbjct: 455 LSYLDVSVNYLTTIG--ELKKLPLLEWLNVSSNRLSD--VSTLTNFPSLNYINVSNNVIR 510
Query: 386 DAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLK 445
G + +L SL +QN N++D + +I + L ++ SN+ IT+ G L
Sbjct: 511 TVG--KMTELPSLKEF-YAQNNNVSD--ISMIHDMPNLRKVDASNNLITNIGT--FDNLP 563
Query: 446 NLRSLTLESCKVTANDIKRLQSRDLPNLVSF 476
L++L + S ++T + DLP+L +F
Sbjct: 564 KLQNLDVHSNRITNTSV----IHDLPSLETF 590
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 195/473 (41%), Gaps = 106/473 (22%)
Query: 74 LIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINL 133
+ LKD NL ++ + C I D G L L L +L N +T + A + L
Sbjct: 357 ITSLKDLPNLVNITADSC-AIEDLGT--LNNLPKLQTLILSDNKDLT--NINAITDMPQL 411
Query: 134 VKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L L+ C G L L KLE L++K + S+ ++ L L L +S + +T
Sbjct: 412 KTLALDGCGITSIG--TLDNLPKLEKLDLKENQLTSISE---INDLPRLSYLDVSVNYLT 466
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
I LK L L LN+ + + + +L+ SL Y+N++ + G K +++ S
Sbjct: 467 --TIGELKKLPLLEWLNVSSNRL--SDVSTLTNFPSLNYINVSNNVIRTVG--KMTELPS 520
Query: 254 LKVLNLGFNEITDECLVH--------------------LKGLTNLESLNLDSCGIGDEGL 293
LK N ++D ++H L L++L++ S I + +
Sbjct: 521 LKEFYAQNNNVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 294 VN--------------------LTGLTNLESINLSFTGISD----GSLRKLA-------- 321
++ + L L ++LSF I G L KL
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNY 640
Query: 322 ----------GLSSLKSLNLDARQITDTG----LAALTSLTGLTHLDLFGARITDSGAAY 367
G+S L++L L + TG L+AL+ LT LT L+L D+G Y
Sbjct: 641 SYLRSLGTMDGVSKLRNLELQNNYLNYTGTEGNLSALSDLTNLTELNL-----RDNG--Y 693
Query: 368 LRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLN 427
+ + L +L D+ IKD+S+L+ L Q L + +E IS L+ L +LN
Sbjct: 694 ISDISGLSTLSRLIYLNLDSN--KIKDISALSNLTTLQELTLENNQIEDISALSDLDNLN 751
Query: 428 ---VSNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVSFR 477
+S ++I + P N+ + VTA++ Q+ LP ++S++
Sbjct: 752 KLALSKNKII-----DISPAANMVN---RGASVTASN----QTYTLPTVLSYQ 792
>sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3 PE=2 SV=1
Length = 904
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 146/362 (40%), Gaps = 49/362 (13%)
Query: 98 GLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKL 157
G + L +L LS NN I ++F GL NL +LDL R ++L L K+
Sbjct: 291 GNDSFAWLPHLEYLSLEYNN-IEHLSSRSFYGLSNLRRLDLRRSFTRQS--ISLTSLPKI 347
Query: 158 ESLNIKWCNCITDSDM----------KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLT 207
+ + +W C+ +M +GL LK L +S S + L+ L T
Sbjct: 348 DDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSS------LRTLTNET 401
Query: 208 LLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDE 267
L+L GCP L L+L + ++S FS +G L+VL+LG NEI E
Sbjct: 402 FLSLAGCP--------------LLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQE 447
Query: 268 CL-VHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGI-----SDGSLRKLA 321
+GL N+ + L + + T + +L+ + L + S R L
Sbjct: 448 LTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLP 507
Query: 322 GLSSLKSLNLDARQITDTGLAALTSLT--GLTHLDLFGARITDSG-----AAYLRNFKNL 374
L L N + I D L L L L H +L AR+ +L+ +L
Sbjct: 508 NLVILDLSNNNIANINDELLKGLEKLEILDLQHNNL--ARLWKHANPGGPVQFLKGLFHL 565
Query: 375 RSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 434
L + G + V+ KDL L ++L N NL + L SL++ + IT
Sbjct: 566 HILNLGSNGFDEIPVEAFKDLRELKSIDLGMN-NLNILPQSVFDNQVSLKSLSLQKNLIT 624
Query: 435 SA 436
S
Sbjct: 625 SV 626
>sp|Q6UXK5|LRRN1_HUMAN Leucine-rich repeat neuronal protein 1 OS=Homo sapiens GN=LRRN1
PE=1 SV=1
Length = 716
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 137/321 (42%), Gaps = 18/321 (5%)
Query: 140 RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
R TRI L + ++ L+S NI T +++ L LT L Q + + + + G+A
Sbjct: 62 RLTRIPSNLSSDTQVLLLQSNNI----AKTVDELQQLFNLTELDFSQNNFTNIKEVGLAN 117
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL 259
L L L L + +T CL LS L L+ +N Q+S F+ + +L L+L
Sbjct: 118 LTQLTTLHLEENQITEMTDYCLQDLSNLQELY---INHNQISTISAHAFAGLKNLLRLHL 174
Query: 260 GFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLV-----NLTGLTNLESINLSFTGISD 314
N++ NLE L IG+ ++ N L NL S+ L+ ++D
Sbjct: 175 NSNKLKVIDSRWFDSTPNLEIL-----MIGENPVIGILDMNFKPLANLRSLVLAGMYLTD 229
Query: 315 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 374
L GL SL+SL+ ++ AL + L LDL I +N L
Sbjct: 230 IPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRL 289
Query: 375 RSLEICG-GGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRI 433
+ L I G L + +L LT L + N L+ + L SL ++N+ +
Sbjct: 290 KELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNAL 349
Query: 434 TSAGLRHLKPLKNLRSLTLES 454
+ + ++ L NLR +++ S
Sbjct: 350 NAIYQKTVESLPNLREISIHS 370
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 122/282 (43%), Gaps = 48/282 (17%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNN 117
+L +D S ++ T+ + L + + L +L QI++ L+ LSNL L + +N
Sbjct: 96 NLTELDFSQNNFTNIKEVGLANLTQLTTLHLEEN-QITEMTDYCLQDLSNLQEL-YINHN 153
Query: 118 AITAQGMKAFAGLINLVKLDLERC------TRIHGGLVNLKGLMKLESLNIKWCNCITDS 171
I+ AFAGL NL++L L +R NL+ LM E+ I I D
Sbjct: 154 QISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG----ILDM 209
Query: 172 DMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
+ KPL+ NL+SL ++ +TD L G LDSL +L F
Sbjct: 210 NFKPLA---NLRSLVLAGMYLTDIPGNALVG------------------LDSLESLS--F 246
Query: 232 YLN--LNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG-- 287
Y N + QL+ K+ +LK L+L N I K + L+ L +++ G
Sbjct: 247 YDNKLVKVPQLA------LQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGEL 300
Query: 288 --IGDEGLVNLTGLTNLESI-NLSFTGISDGSLRKLAGLSSL 326
+ L NL LT LE+ N + I + R + L SL
Sbjct: 301 VSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESL 342
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 28/168 (16%)
Query: 291 EGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 350
+ L L LT L+ +FT I + L A L+ L +L+L+ QIT+ L L+ L
Sbjct: 89 DELQQLFNLTELDFSQNNFTNIKEVGL---ANLTQLTTLHLEENQITEMTDYCLQDLSNL 145
Query: 351 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT 410
L + +I+ A KNL L + L + +L +L + +N
Sbjct: 146 QELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN---- 201
Query: 411 DKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 458
+ G++ +N KPL NLRSL L +T
Sbjct: 202 --------PVIGILDMN-------------FKPLANLRSLVLAGMYLT 228
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 43/344 (12%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 268
C +T + L +S +L YLNL+ C Q++ DG E + LK L L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLT-GLTNLESINLS-FTGISDGSLRKLAGLS 324
L H++ + L SLNL SC I DEG+V + G L+++ LS + ++D SL L GL+
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTAL-GLN 258
Query: 325 SLKSLNLDARQ---ITDTGLAALT-SLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEI 379
+ L+A + +TD G L + L +DL ITDS L L I
Sbjct: 259 CPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDS---------TLIQLSI 309
Query: 380 CGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSR-ITSAGL 438
L + H + ++ +L+LS + G L L + N IT L
Sbjct: 310 HCPKLQALSLSHCELITDDGILHLSNS----------TCGHERLRVLELDNCLLITDVAL 359
Query: 439 RHLKPLKNLRSLTLESC-KVTANDIKRLQSRDLPNL---VSFRP 478
HL+ + L L L C +VT IKR++++ LP++ F P
Sbjct: 360 EHLENCRGLERLELYDCQQVTRAGIKRMRAQ-LPHVKVHAYFAP 402
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 137/333 (41%), Gaps = 86/333 (25%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLT-GLTNLESINLSFTG-ISDGSLRKLA----GLSSLKSLNLD-ARQIT 337
C I D L+ L+ L++++LS I+D + L+ G L+ L LD IT
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLIT 355
Query: 338 DTGLAALTSLTGLTHLDLFGA-RITDSGAAYLR 369
D L L + GL L+L+ ++T +G +R
Sbjct: 356 DVALEHLENCRGLERLELYDCQQVTRAGIKRMR 388
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|Q8CDU4|FXL13_MOUSE F-box/LRR-repeat protein 13 OS=Mus musculus GN=Fbxl13 PE=2 SV=2
Length = 790
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 168/422 (39%), Gaps = 93/422 (22%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRN 116
++L ++ G D L + C NLQ L+ + C +D + H+ G + L+ N
Sbjct: 306 NVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNL-SN 364
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL 176
IT + M+ + L++L++ +C
Sbjct: 365 TTITNRTMRLLP-----------------------RYFHNLQNLSLAYCR---------- 391
Query: 177 SGLTNLKSLQISCSKVTDSGIAYL---KGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K TD G+ YL G KL L+L GC T ++ + S+ +
Sbjct: 392 --------------KFTDKGLQYLNLGNGCHKLIYLDLSGC--TQVLVEKCPRISSVVLI 435
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDEC---------------LVHLKGLTN- 277
+SD + S K+ G I+D C +V KGLT+
Sbjct: 436 GSP--HISDSAFKALSSCDLKKIRFEGNKRISDACFKSIDRNYPGINHIYMVDCKGLTDS 493
Query: 278 ----------LESLNLDSC-GIGDEGLVN-LTGLTNLESINLSFTGIS---DGSLRKLAG 322
L LNL +C IGD GL + G ++ L+ T S D S+ +L+
Sbjct: 494 SLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSE 553
Query: 323 -LSSLKSLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEIC 380
+L LNL + +TD + + S+ L +DL G I++ G L + LR + +
Sbjct: 554 RCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVS 613
Query: 381 GG-GLTDAGVK-HIKDLSSLTLLNLSQNCNLTDKTLELISGL-TGLVSLNVSN-SRITSA 436
+TD G++ + K L L++S LTD ++ I+ T + SLN++ +IT A
Sbjct: 614 DCVNITDFGIRAYCKTSLLLEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDA 673
Query: 437 GL 438
G+
Sbjct: 674 GM 675
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 143/358 (39%), Gaps = 80/358 (22%)
Query: 131 INLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG------------ 178
+N+++L+ C L + L+ LN+ C TD M+ +S
Sbjct: 305 LNVLRLNFRGCDFRTKTLKAVSHCKNLQELNVSDCQSFTDESMRHISEGCPGVLYLNLSN 364
Query: 179 --------------LTNLKSLQIS-CSKVTDSGIAYLK---GLQKLTLLNLEGCPVTAAC 220
NL++L ++ C K TD G+ YL G KL L+L GC T
Sbjct: 365 TTITNRTMRLLPRYFHNLQNLSLAYCRKFTDKGLQYLNLGNGCHKLIYLDLSGC--TQVL 422
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
++ + S+ + +SD + S K+ G I+D C +S
Sbjct: 423 VEKCPRISSVVLIGSP--HISDSAFKALSSCDLKKIRFEGNKRISDACF---------KS 471
Query: 281 LNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNL-DARQITDT 339
++ + GI +V+ GLT D SL+ L+ L L LNL + +I D
Sbjct: 472 IDRNYPGINHIYMVDCKGLT-------------DSSLKSLSLLKQLTVLNLTNCIRIGDI 518
Query: 340 GLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT-DAGVKHIKD-LSS 397
GL G A +R LR L + L D+ V + + +
Sbjct: 519 GLKHFFD-----------------GPASIR----LRELNLTNCSLLGDSSVIRLSERCPN 557
Query: 398 LTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESC 455
L LNL +LTD +E I+ + L+S+++S + I++ G+ L + LR +++ C
Sbjct: 558 LHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDC 615
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 49 MDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNL 108
++ IAS SL+SVDLSG+ +++ G+ L L+ + + C+ I+D G +R
Sbjct: 574 IEYIASM-LSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDFG---IRAYCKT 629
Query: 109 TSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLM--KLESLNIKWCN 166
+ L L LD+ C+++ ++ + ++ SLNI C
Sbjct: 630 SLL---------------------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCP 668
Query: 167 CITDSDMKPLSGLTN-LKSLQIS-CSKVTDSGIAYLK-GLQKLTLLNLEGCP-VTAACLD 222
ITD+ M+ LS + L L IS C ++TD I L+ G ++L +L ++ C ++ A
Sbjct: 669 KITDAGMEILSARCHYLHILDISGCIQLTDQIIQDLQIGCKQLRILKMQFCKSISPAAAQ 728
Query: 223 SLSAL 227
+S++
Sbjct: 729 KMSSV 733
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 55/307 (17%)
Query: 41 YPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLE 100
YPG+N +M VD G +TDS L L L L+ CI+I D GL+
Sbjct: 476 YPGINHIYM------------VDCKG--LTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLK 521
Query: 101 HLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESL 160
H S+ R N + G ++++L ERC +H L
Sbjct: 522 HF--FDGPASIRLRELNLTNC----SLLGDSSVIRLS-ERCPNLH-------------YL 561
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP----- 215
N++ C +TD ++ ++ + +L S+ +S + +++ G+ L +KL +++ C
Sbjct: 562 NLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCVNITDF 621
Query: 216 -VTAACLDSLSALGSLFYLNLNRC-QLSDDGCEKFS----KIGSLKVLNLGFNEITDECL 269
+ A C SL L +L+++ C QL+DD + + +I SL + G +ITD +
Sbjct: 622 GIRAYCKTSL----LLEHLDVSYCSQLTDDIIKTIAIFCTRITSLNI--AGCPKITDAGM 675
Query: 270 VHLKGLTN-LESLNLDSC-GIGDEGLVNLT-GLTNLESINLSF-TGISDGSLRKLAGLSS 325
L + L L++ C + D+ + +L G L + + F IS + +K++ +
Sbjct: 676 EILSARCHYLHILDISGCIQLTDQIIQDLQIGCKQLRILKMQFCKSISPAAAQKMSSVVQ 735
Query: 326 LKSLNLD 332
+ N D
Sbjct: 736 HQEYNSD 742
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 43/344 (12%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 268
C +T + L +S +L YLNL+ C Q++ DG E + LK L L G ++ DE
Sbjct: 140 CVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLT-GLTNLESINLS-FTGISDGSLRKLAGLS 324
L H++ + L SLNL SC I DEG+V + G L+++ LS + ++D SL L GL+
Sbjct: 200 LKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTAL-GLN 258
Query: 325 SLKSLNLDARQ---ITDTGLAALT-SLTGLTHLDLFGA-RITDSGAAYLRNFKNLRSLEI 379
+ L+A + +TD G L + L +DL ITDS L L I
Sbjct: 259 CPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDS---------TLIQLSI 309
Query: 380 CGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSR-ITSAGL 438
L + H + ++ +L+LS + G L L + N IT L
Sbjct: 310 HCPKLQALSLSHCELITDDGILHLSNS----------TCGHERLRVLELDNCLLITDVAL 359
Query: 439 RHLKPLKNLRSLTLESC-KVTANDIKRLQSRDLPNL---VSFRP 478
HL+ + L L L C +VT IKR++++ LP++ F P
Sbjct: 360 EHLENCRGLERLELYDCQQVTRAGIKRMRAQ-LPHVKVHAYFAP 402
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 137/333 (41%), Gaps = 86/333 (25%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L +IT +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LGSLFYLNLNRCQLSDDG-CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDS 285
LG LN R Q+ + C + + GF + C LE ++L+
Sbjct: 255 LG----LNCPRLQILEAARCSHLT--------DAGFTLLARNC-------HELEKMDLEE 295
Query: 286 CG-IGDEGLVNLT-GLTNLESINLSFTG-ISDGSLRKLA----GLSSLKSLNLD-ARQIT 337
C I D L+ L+ L++++LS I+D + L+ G L+ L LD IT
Sbjct: 296 CILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLIT 355
Query: 338 DTGLAALTSLTGLTHLDLFGA-RITDSGAAYLR 369
D L L + GL L+L+ ++T +G +R
Sbjct: 356 DVALEHLENCRGLERLELYDCQQVTRAGIKRMR 388
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + + L+ L+ + C+ I+D LEHL L L +T G+
Sbjct: 325 ITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|Q3EC97|FBL14_ARATH F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2
SV=1
Length = 480
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 178/447 (39%), Gaps = 80/447 (17%)
Query: 32 ALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLSGSDVTDSGLIHLK-DCSNLQSLDFNF 90
AL LC ++P ++ +++I S S L G V D GL+ L +C +L L +F
Sbjct: 68 ALLSLC-RRFPNLSK--VEIIYSGWMSKL-----GKQVDDQGLLVLTTNCHSLTDLTLSF 119
Query: 91 CIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVKLDLERCTRIHG--G 147
C I+D G+ HL L+SL IT G+ + A G L +L L RC +
Sbjct: 120 CTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEW 179
Query: 148 LVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQISCSKVTDSGIAYLKGLQKL 206
L L LE L IK C I + D+ L + L SLQ D+ Y+K +
Sbjct: 180 LEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLTSLQFE----VDANYRYMKVYDQ- 234
Query: 207 TLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITD 266
L++E P L SL L+L C ++ G +
Sbjct: 235 --LDVERWP------KQLVPCDSLVELSLGNCIIAP---------------GRGLACVLR 271
Query: 267 ECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT-GLTNLESINLSFTGISDGSLRKLAGLS 324
C NLE L+LD C G+ D ++ L ++L SI+L ++
Sbjct: 272 NC-------KNLEKLHLDMCTGVSDSDIIALVQKASHLRSISL-----------RVPSDF 313
Query: 325 SLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFK-----------N 373
+L LN ++TD L+A+ + L+ F +D L +F
Sbjct: 314 TLPLLNNITLRLTDESLSAIAQ--HCSKLESFKISFSDGEFPSLFSFTLQGIITLIQKCP 371
Query: 374 LRSL---EICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN 430
+R L +C D G++ + L +L L ++D+ L L+S L L +S
Sbjct: 372 VRELSLDHVC--VFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSK 429
Query: 431 SR-ITSAGLRHLKPLKNLRSLTLESCK 456
+T G+R L L L +E C
Sbjct: 430 CLGVTDDGMRPLVGSHKLELLVVEDCP 456
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 27 AFRDCA-LQDLCLGQYPGVNDKWMDVIASQGSSLLSVDLS-GSD------------VTDS 72
R+C L+ L L GV+D + + + S L S+ L SD +TD
Sbjct: 269 VLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLRLTDE 328
Query: 73 GLIHL-KDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLI 131
L + + CS L+S +F SDG L SF T QG+
Sbjct: 329 SLSAIAQHCSKLESFKISF----SDGEFPSL--------FSF------TLQGIITLIQKC 370
Query: 132 NLVKLDLER-CTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-C 189
+ +L L+ C G+ L KLE L + C ++D + +S +L L++S C
Sbjct: 371 PVRELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSKC 430
Query: 190 SKVTDSGIAYLKGLQKLTLLNLEGCP 215
VTD G+ L G KL LL +E CP
Sbjct: 431 LGVTDDGMRPLVGSHKLELLVVEDCP 456
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 168/346 (48%), Gaps = 47/346 (13%)
Query: 157 LESLNIKWCNCITDSDMKPLS-GLTNLKSLQIS-CSKVTDSGIAYL-KGLQKLTLLNLEG 213
L L+++ C + DS +K + N++ L ++ C+K+TDS L + KL L+L
Sbjct: 80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTS 139
Query: 214 C-PVTAACLDSLS-ALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLNL-GFNEITDEC 268
C VT + L +S +L YLNL+ C Q++ +G E + LK L L G ++ DE
Sbjct: 140 CVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEA 199
Query: 269 LVHLKGLTN-LESLNLDSCG-IGDEGLVNLT-GLTNLESINLS-FTGISDGSLRKLAGLS 324
L H++ + L SLNL SC I D+G+V + G L+++ LS + ++D SL L GL+
Sbjct: 200 LKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTAL-GLN 258
Query: 325 SLKSLNLDARQ---ITDTGLAALT-SLTGLTHLDLFGAR-ITDSGAAYLR-NFKNLRSLE 378
+ L+A + +TD G L + L +DL ITDS L + L++L
Sbjct: 259 CPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALS 318
Query: 379 ICGGGL-TDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSR-ITSA 436
+ L TD G+ H LSS T G L L + N +T A
Sbjct: 319 LSHCELITDEGILH---LSSST------------------CGHERLRVLELDNCLLVTDA 357
Query: 437 GLRHLKPLKNLRSLTLESC-KVTANDIKRLQSRDLPNL---VSFRP 478
L HL+ + L L L C +VT IKR++++ LP++ F P
Sbjct: 358 SLEHLENCRGLERLELYDCQQVTRAGIKRMRAQ-LPHVKVHAYFAP 402
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 139/340 (40%), Gaps = 82/340 (24%)
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKL 136
++C N++ L+ N C +I+D L R S L L ++T +K +
Sbjct: 101 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGIS-------- 152
Query: 137 DLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQI-------- 187
+G LE LN+ WC+ IT ++ L G LK+L +
Sbjct: 153 ---------------EGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLED 197
Query: 188 -------------------SCSKVTDSGIAYL-KGLQKLTLLNLEGCP-VTAACLDSLSA 226
SCS++TD G+ + +G +L L L GC +T A SL+A
Sbjct: 198 EALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDA---SLTA 254
Query: 227 LG----SLFYLNLNRC-QLSDDG-------CEKFSKIGSLKVLNLGFNEITDECLVHLK- 273
LG L L RC L+D G C + K+ + + ITD LV L
Sbjct: 255 LGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECV-----LITDSTLVQLSI 309
Query: 274 GLTNLESLNLDSCG-IGDEGLVNLT----GLTNLESINL-SFTGISDGSLRKLAGLSSLK 327
L++L+L C I DEG+++L+ G L + L + ++D SL L L+
Sbjct: 310 HCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLE 369
Query: 328 SLNL-DARQITDTGLAALTSLTGLTHLDLFGARITDSGAA 366
L L D +Q+T G+ + + + + A +T A
Sbjct: 370 RLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPPAV 409
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 69 VTDSGLIHLKDCS----NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD G++HL + L+ L+ + C+ ++D LEHL L L +T G+
Sbjct: 325 ITDEGILHLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGI 384
Query: 125 KAFAGLINLVKL 136
K + VK+
Sbjct: 385 KRMRAQLPHVKV 396
>sp|O15455|TLR3_HUMAN Toll-like receptor 3 OS=Homo sapiens GN=TLR3 PE=1 SV=1
Length = 904
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 144/362 (39%), Gaps = 45/362 (12%)
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
F N I + GL N+ L+L+R ++L L K++ + +W C+ +
Sbjct: 304 FLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS--ISLASLPKIDDFSFQWLKCLEHLN 361
Query: 173 MK----P------LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLD 222
M+ P +GL NLK L +S S + L+ L T ++L P
Sbjct: 362 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTS------LRTLTNETFVSLAHSP------- 408
Query: 223 SLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESL 281
L LNL + ++S + FS +G L+VL+LG NEI E +GL N+ +
Sbjct: 409 -------LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEI 461
Query: 282 NLDSCGIGDEGLVNLTGLTNLESINLSFTGIS--DGSLRKLAGLSSLKSLNLDARQITDT 339
L + + +L+ + L + D S L +L L+L I +
Sbjct: 462 YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 521
Query: 340 GLAALTSLTGLTHLDL-------FGARITDSGAAY-LRNFKNLRSLEICGGGLTDAGVKH 391
L L L LDL G Y L+ +L L + G + V+
Sbjct: 522 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 581
Query: 392 IKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKP-LKNLRSL 450
KDL L +++L N NL + + L SLN+ + ITS + P +NL L
Sbjct: 582 FKDLFELKIIDLGLN-NLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 640
Query: 451 TL 452
+
Sbjct: 641 DM 642
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%)
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 335
TN+ LNL + N T + L S+++ F IS L LK LNL +
Sbjct: 51 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 110
Query: 336 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 385
++ T LT L L I KNL +L++ GL+
Sbjct: 111 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 160
>sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1
PE=1 SV=3
Length = 980
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 203 LQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGF- 261
L+KL L+ G + +S + SL YL LN LS S++ +L+ + +G+
Sbjct: 167 LKKLKYLSFGGNFFSGEIPESYGDIQSLEYLGLNGAGLSGKSPAFLSRLKNLREMYIGYY 226
Query: 262 NEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLA 321
N T GLT LE L++ SC + E +L+ L +L ++ L ++ +L+
Sbjct: 227 NSYTGGVPPEFGGLTKLEILDMASCTLTGEIPTSLSNLKHLHTLFLHINNLTGHIPPELS 286
Query: 322 GLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLF 356
GL SLKSL+L Q+T + +L +T ++LF
Sbjct: 287 GLVSLKSLDLSINQLTGEIPQSFINLGNITLINLF 321
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 4/259 (1%)
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE--GCPVTAACLDSLSALGSLFYLNLN 236
LT+L +L ++ + T +K L L +LN+ G + L A+ L L+
Sbjct: 93 LTHLVNLTLAANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEILKAMVDLEVLDTY 152
Query: 237 RCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNL 296
+ + S++ LK L+ G N + E + +LE L L+ G+ + L
Sbjct: 153 NNNFNGKLPPEMSELKKLKYLSFGGNFFSGEIPESYGDIQSLEYLGLNGAGLSGKSPAFL 212
Query: 297 TGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
+ L NL + + + + G + GL+ L+ L++ + +T +L++L L L L
Sbjct: 213 SRLKNLREMYIGYYNSYTGGVPPEFGGLTKLEILDMASCTLTGEIPTSLSNLKHLHTLFL 272
Query: 356 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 415
+T L +L+SL++ LT + +L ++TL+NL +N NL + E
Sbjct: 273 HINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQSFINLGNITLINLFRN-NLYGQIPE 331
Query: 416 LISGLTGLVSLNVSNSRIT 434
I L L V + T
Sbjct: 332 AIGELPKLEVFEVWENNFT 350
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 151/389 (38%), Gaps = 71/389 (18%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCT---RIHGGLVNLKGLMKLESLN 161
L NL + N+ T F GL L LD+ CT I L NLK L L L+
Sbjct: 215 LKNLREMYIGYYNSYTGGVPPEFGGLTKLEILDMASCTLTGEIPTSLSNLKHLHTL-FLH 273
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
I N +T LSGL +LKSL +S +++T
Sbjct: 274 I---NNLTGHIPPELSGLVSLKSLDLSINQLT------------------------GEIP 306
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
S LG++ +NL R L E ++ L+V + N T + +L NL L
Sbjct: 307 QSFINLGNITLINLFRNNLYGQIPEAIGELPKLEVFEVWENNFTLQLPANLGRNGNLIKL 366
Query: 282 NLDSCGIGDEGLVNLTGL--------TNLESINLS---FTGISDGSLRKLAGLSSLKSLN 330
++ +LTGL LE + LS F G L K L+ ++ +
Sbjct: 367 DVSDN--------HLTGLIPKDLCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRIVK 418
Query: 331 LDARQITDTGLAALTSLTGLTHLDLFGA---RITDSG-----------------AAYLRN 370
GL L +T + D F + +T SG + N
Sbjct: 419 NLLNGTVPAGLFNLPLVTIIELTDNFFSGELPVTMSGDVLDQIYLSNNWFSGEIPPAIGN 478
Query: 371 FKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSN 430
F NL++L + + I +L L+ +N S N N+T + IS + L+S+++S
Sbjct: 479 FPNLQTLFLDRNRFRGNIPREIFELKHLSRINTSAN-NITGGIPDSISRCSTLISVDLSR 537
Query: 431 SRITSAGLRHLKPLKNLRSLTLESCKVTA 459
+RI + + +KNL +L + ++T
Sbjct: 538 NRINGEIPKGINNVKNLGTLNISGNQLTG 566
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 5/306 (1%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG-LMKLESL 160
L GL +L SL N +T + ++F L N+ ++L R ++G + G L KLE
Sbjct: 285 LSGLVSLKSLDLSINQ-LTGEIPQSFINLGNITLINLFR-NNLYGQIPEAIGELPKLEVF 342
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ W N T L NL L +S + +T L +KL +L L
Sbjct: 343 EV-WENNFTLQLPANLGRNGNLIKLDVSDNHLTGLIPKDLCRGEKLEMLILSNNFFFGPI 401
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
+ L SL + + + L+ + + ++ L N + E V + G L+
Sbjct: 402 PEELGKCKSLTKIRIVKNLLNGTVPAGLFNLPLVTIIELTDNFFSGELPVTMSGDV-LDQ 460
Query: 281 LNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 340
+ L + E + NL+++ L R++ L L +N A IT
Sbjct: 461 IYLSNNWFSGEIPPAIGNFPNLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGI 520
Query: 341 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTL 400
+++ + L +DL RI + N KNL +L I G LT + I +++SLT
Sbjct: 521 PDSISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGSIPTGIGNMTSLTT 580
Query: 401 LNLSQN 406
L+LS N
Sbjct: 581 LDLSFN 586
>sp|A2ARI4|LGR4_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Mus
musculus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 6/228 (2%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K LSGL LK L + +++ ++GL L L L+ +T+ DS L L +L
Sbjct: 99 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 158
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ L++ S + +L+ L L N I+ L++L L+L + I
Sbjct: 159 WLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQ 218
Query: 294 VNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 353
GL NLE+++L++ + D + + L SLK L + I+ A L +
Sbjct: 219 HCFDGLDNLETLDLNYNNL-DEFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTI 277
Query: 354 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-----AGVKHIKDLS 396
L+ ++ G + N +L SL I G L AG H++ L+
Sbjct: 278 HLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLT 325
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
Query: 255 KVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISD 314
+ L++ N IT K LE L L + L+GL L+ + L +
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 315 GSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNL 374
+ GLS+L+SL LDA IT + L L HL L +T+ L N L
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTL 179
Query: 375 RSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRIT 434
++L + ++ +LSSL +L+L N + + GL L +L+++ + +
Sbjct: 180 QALTLALNNISSIPDFAFTNLSSLVVLHLHNN-KIKSLSQHCFDGLDNLETLDLNYNNLD 238
Query: 435 SAGLRHLKPLKNLRSLTLESCKVT 458
+ +K L +L+ L S ++
Sbjct: 239 EFP-QAIKALPSLKELGFHSNSIS 261
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 151/398 (37%), Gaps = 93/398 (23%)
Query: 59 LLSVDLSGSDVTDSGLIHLKDCSNLQSLDF-----NFCIQISDGGLEHLRGLSNLTSLSF 113
L + L+G+D++ IH K S L+ L N Q+ E +RGLS L SL
Sbjct: 83 LEELQLAGNDLS---FIHPKALSGLKELKVLTLQNN---QLKTVPSEAIRGLSALQSLRL 136
Query: 114 RRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDM 173
N+ IT+ +F GL+ L L L+ + L L L++L + N + D
Sbjct: 137 DANH-ITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDF 195
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL-----NLEGCPVTAACLDSLSALG 228
+ L++L L + +K+ GL L L NL+ P L SL LG
Sbjct: 196 A-FTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSLKELG 254
Query: 229 SLFYLNLNRCQLSDDGCEKFSKIGSLKVLNL-----------GFNEITD----------- 266
+ N + DG F+ L+ ++L F+ ++D
Sbjct: 255 ----FHSNSISVIPDG--AFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASL 308
Query: 267 -ECLVHLKGLTNLESLNLDSCGIGD----------------------EGLVNLTGLTNLE 303
+ +L G +LESL L I L + G LE
Sbjct: 309 VQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRALE 368
Query: 304 SINLSFTGISDGSLRKLAGLSSLKSLNLD---ARQITDTGLAALTSLT------------ 348
I+L IS GL+SL+ L+L R+I A L ++T
Sbjct: 369 EISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSF 428
Query: 349 ------GLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI 379
GL L L G ++ D+ AA R+F NLRSL +
Sbjct: 429 PTEGLNGLNQLKLVGNFQLKDALAA--RDFANLRSLSV 464
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 72/180 (40%), Gaps = 2/180 (1%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
LS T ++L IS + +T K L L L G ++ +LS L L L L
Sbjct: 55 LSAFT--QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTL 112
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
QL E + +L+ L L N IT +GL L L LD + + +
Sbjct: 113 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRP 172
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
L+ L L+++ L+ IS LSSL L+L +I L L LDL
Sbjct: 173 LSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDL 232
>sp|Q91ZZ5|RXFP2_MOUSE Relaxin receptor 2 OS=Mus musculus GN=Rxfp2 PE=2 SV=2
Length = 737
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 112/277 (40%), Gaps = 32/277 (11%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC 165
SN+T LS ++N I +K F+ L K+ L+
Sbjct: 120 SNVTLLSLKKNK-IHRLPVKVFSRYTELRKIYLQH------------------------- 153
Query: 166 NCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLS 225
NCIT + GL NL+ L +S + +T K L +L L L+ P+T S
Sbjct: 154 NCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFM 213
Query: 226 ALGSLFYLNL--NRCQ-LSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLN 282
L SLF+L++ NR + L + C + ++ + + N G IT+ + LT L L
Sbjct: 214 GLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVL-FLP 272
Query: 283 LDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLA 342
+ G E + L NL ++LS I+ + + L L+ LNL + +
Sbjct: 273 RNQIGFVPEK--TFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKN 330
Query: 343 ALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 379
SL L LDL I + + KNL + +
Sbjct: 331 QFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYL 367
>sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA
OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1
Length = 976
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 176/435 (40%), Gaps = 45/435 (10%)
Query: 58 SLLSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFC-----IQISDGGLEHLRGLSNLTSLS 112
SLLS+DL G+ ++ + DCS+LQ+LD +F I S L+ L L
Sbjct: 93 SLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQLEQL------- 145
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLER---------------------------CTRIH 145
+NN + + + NL LDL + I
Sbjct: 146 ILKNNQLIGPIPSTLSQIPNLKILDLAQNKLSGEIPRLIYWNEVLQYLGLRGNNLVGNIS 205
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQK 205
L L GL + N N +T S + + T + L +S +++T I + G +
Sbjct: 206 PDLCQLTGLWYFDVRN----NSLTGSIPETIGNCTAFQVLDLSYNQLTGE-IPFDIGFLQ 260
Query: 206 LTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEIT 265
+ L+L+G ++ + + +L L+L+ LS + + L L N++T
Sbjct: 261 VATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHSNKLT 320
Query: 266 DECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSS 325
L ++ L L L+ + L LT+L +N++ + L+ ++
Sbjct: 321 GSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTN 380
Query: 326 LKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 385
L SLN+ + + T A L +T+L+L I L NL +L++ +
Sbjct: 381 LNSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKIN 440
Query: 386 DAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLK 445
+ DL L +NLS+N ++T L ++ +++SN+ I+ L L+
Sbjct: 441 GIIPSSLGDLEHLLKMNLSRN-HITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQ 499
Query: 446 NLRSLTLESCKVTAN 460
N+ L LE+ +T N
Sbjct: 500 NIILLRLENNNLTGN 514
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 2/278 (0%)
Query: 129 GLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS 188
G + + L L+ ++ G + ++ GLM+ ++ N ++ S L LT + L +
Sbjct: 257 GFLQVATLSLQ-GNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLH 315
Query: 189 CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKF 248
+K+T S L + KL L L +T L L LF LN+ L +
Sbjct: 316 SNKLTGSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHL 375
Query: 249 SKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLS 308
S +L LN+ N+ + + L ++ LNL S I V L+ + NL++++LS
Sbjct: 376 SSCTNLNSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLS 435
Query: 309 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 368
I+ L L L +NL IT +L + +DL I+ L
Sbjct: 436 NNKINGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEEL 495
Query: 369 RNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQN 406
+N+ L + LT V + + SLT+LN+S N
Sbjct: 496 NQLQNIILLRLENNNLT-GNVGSLANCLSLTVLNVSHN 532
>sp|Q8LB33|FB330_ARATH F-box protein At3g58530 OS=Arabidopsis thaliana GN=At3g58530 PE=2
SV=1
Length = 353
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 35/212 (16%)
Query: 216 VTAACLDSLSALGSLFYLNLNRCQ-LSDDGCEKFSKI-GSLKVLNLGFN-EITDECLVHL 272
V C D AL SL +LNLN CQ +SD+G E + I LKV ++ +N +TD + +L
Sbjct: 102 VKTECPD---ALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNL 158
Query: 273 -KGLTNLESLNLDSCGIGDEGLVNLTG--LTNLESINLS--FTGISDGSLRKLAGLSSLK 327
K ++ LNL C + + L +LES+N++ DG L+ L SL+
Sbjct: 159 VKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQ 218
Query: 328 SLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTD 386
+LNL A L+G T D + +LR L+ICG ++D
Sbjct: 219 TLNLYA-------------LSGFT----------DKAYMKISLLADLRFLDICGAQNISD 255
Query: 387 AGVKHIKDLSSLTLLNLSQNCNLTDKTLELIS 418
G+ HI + L LNL+ +TD + I+
Sbjct: 256 EGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 121/278 (43%), Gaps = 59/278 (21%)
Query: 69 VTDSGLIHLK-DCSN----LQSLDFNFCIQISDGGLEHLRGL-SNLTSLSFRRNNAITAQ 122
V DS L +K +C + L+ L+ N C +ISD G+E + + L S N +T
Sbjct: 94 VVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDA 153
Query: 123 GMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLS-GLTN 181
G++ NLVK C I LN+ C +TD M+ ++ +
Sbjct: 154 GIR------NLVK----NCRHI-------------TDLNLSGCKSLTDKSMQLVAESYPD 190
Query: 182 LKSLQIS-CSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQ- 239
L+SL I+ C K+TD G+ L+ LQK C SL LNL
Sbjct: 191 LESLNITRCVKITDDGL--LQVLQK--------------CF-------SLQTLNLYALSG 227
Query: 240 LSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNLT 297
+D K S + L+ L++ G I+DE + H+ LESLNL C I D G+ +
Sbjct: 228 FTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIA 287
Query: 298 -GLTNLESINL-SFTGISDGSLRKLAGLSSLKSLNLDA 333
T+LE ++L G++D L L+ S LD
Sbjct: 288 NSCTSLEFLSLFGIVGVTDRCLETLSQTCSTTLTTLDV 325
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 32/155 (20%)
Query: 294 VNLTGLTNLESINLSFT-GISDGSLRKLA-----GLSSLKSLNLDA-RQITDTGLAALTS 346
++L ++ INL F G+ D L+ + L SL+ LNL+ ++I+D G+ A+TS
Sbjct: 75 LSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITS 134
Query: 347 LTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKH-IKDLSSLTLLNLSQ 405
+ L +F + N+R +TDAG+++ +K+ +T LNLS
Sbjct: 135 ICP--KLKVFSI------------YWNVR--------VTDAGIRNLVKNCRHITDLNLSG 172
Query: 406 NCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGL 438
+LTDK+++L++ L SLN++ +IT GL
Sbjct: 173 CKSLTDKSMQLVAESYPDLESLNITRCVKITDDGL 207
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 25 LEAFRDC-ALQDLCLGQYPGVNDK-WMDVIASQGSSLLSVDLSGS-DVTDSGLIHLKDCS 81
L+ + C +LQ L L G DK +M + S + L +D+ G+ +++D G+ H+ C+
Sbjct: 208 LQVLQKCFSLQTLNLYALSGFTDKAYMKI--SLLADLRFLDICGAQNISDEGIGHIAKCN 265
Query: 82 NLQSLDFNFCIQISDGGLEHLRGLSNLTSLSF 113
L+SL+ +C++I+D G+ + ++ TSL F
Sbjct: 266 KLESLNLTWCVRITDAGVNTIA--NSCTSLEF 295
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 82 NLQSLDFNFCIQISDGGL-EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER 140
+L+SL+ C++I+D GL + L+ +L +L+ + T + + L +L LD+
Sbjct: 190 DLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICG 249
Query: 141 CTRIHG-GLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAY 199
I G+ ++ KLESLN+ WC ITD+ + ++ SC+
Sbjct: 250 AQNISDEGIGHIAKCNKLESLNLTWCVRITDAGVNTIAN---------SCT--------- 291
Query: 200 LKGLQKLTLLNLEGCPVTAACLDSLSALGS--LFYLNLNRC 238
L+ L+L + G VT CL++LS S L L++N C
Sbjct: 292 --SLEFLSLFGIVG--VTDRCLETLSQTCSTTLTTLDVNGC 328
>sp|Q86UE6|LRRT1_HUMAN Leucine-rich repeat transmembrane neuronal protein 1 OS=Homo
sapiens GN=LRRTM1 PE=2 SV=2
Length = 522
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCIT 169
R N+++ F GL+ L L L+ H + +++G L +++ L + N IT
Sbjct: 73 RYNSLSELRAGQFTGLMQLTWLYLD-----HNHICSVQGDAFQKLRRVKELTLS-SNQIT 126
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ NL+S+ +S +K+ GL+KLT L++ + + S
Sbjct: 127 QLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS 186
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L +L++ QL F+ + L L+L N++ H L +L SL L +
Sbjct: 187 LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA 246
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
+ +L + NLE ++LS I + L+SL LD+ ++T L S
Sbjct: 247 IV-VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKS 305
Query: 350 LTHLDLFGARITDSG------AAYLRNFK 372
LT + L G + D G A++L NF+
Sbjct: 306 LTSITLAG-NLWDCGRNVCALASWLNNFQ 333
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 1/164 (0%)
Query: 295 NLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 354
TGL L + L I L +K L L + QIT + L +D
Sbjct: 84 QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVD 143
Query: 355 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 414
L ++ + L +L + + V+ +D SL L++ N L
Sbjct: 144 LSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN-QLKSLAR 202
Query: 415 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 458
+GL L L++ ++ + H L +L SL L KV
Sbjct: 203 NSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA 246
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 6/225 (2%)
Query: 229 SLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ YL+ N C + D F K+ +K L L N+IT + + NL S++L
Sbjct: 92 TWLYLDHNHICSVQGDA---FQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNK 148
Query: 288 IGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 347
+ GL L ++++ I +R SLK L++ Q+ + L
Sbjct: 149 LQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGL 208
Query: 348 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNC 407
LT L L + A+ +L SL + + V + + +L ++LS N
Sbjct: 209 FKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIV-VSSLDWVWNLEKMDLSGN- 266
Query: 408 NLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+ + + L SL + ++R+T R L K+L S+TL
Sbjct: 267 EIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKSLTSITL 311
>sp|Q50L44|LIGO1_CHICK Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Gallus gallus
GN=LINGO1 PE=2 SV=1
Length = 613
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 114/269 (42%), Gaps = 17/269 (6%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N I+A AF L NL L L R I G+ GL L L+I + D
Sbjct: 98 NIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 155
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 156 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 214
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 215 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGL----NLTSLSITHCNLTS 270
Query: 291 EGLVNLTGLTNLESINLSFTGIS--DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 348
V++ L L +NLS+ I +GS+ L L L+ + L Q+T A L
Sbjct: 271 IPYVSVRHLVYLRFLNLSYNPIVTIEGSM--LHDLLRLQEIQLVGGQLTTVEPFAFRGLN 328
Query: 349 GLTHLDLFGARITDSGAAYLRNFKNLRSL 377
L L++ G +T + + NL +L
Sbjct: 329 YLRILNVSGNLLTTLEESAFHSVGNLETL 357
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 24/183 (13%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLTNLES 304
F + +LK L +G N++ GL +LE L L+ C I E L +L GL L
Sbjct: 156 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 215
Query: 305 INLSFTGISDGSLRKLAGLSSLK----------------SLNLDARQITDTGLAALT--- 345
+L+ I D S ++L L L+ LNL + IT L ++
Sbjct: 216 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVS 275
Query: 346 --SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 403
L L L+L I + L + L+ +++ GG LT + L+ L +LN+
Sbjct: 276 VRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNV 335
Query: 404 SQN 406
S N
Sbjct: 336 SGN 338
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
+LE + L+ IS L +L++L L + ++ L T L+ LT LD+
Sbjct: 84 FANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 143
Query: 356 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 415
+I ++ NL+SLE+ L + L+SL L L + CNLT E
Sbjct: 144 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL-EKCNLTSIPTE 202
Query: 416 LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+S L GL+ L + + I + K L L+ L +
Sbjct: 203 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 239
>sp|A1A4H9|LRRT1_BOVIN Leucine-rich repeat transmembrane neuronal protein 1 OS=Bos taurus
GN=LRRTM1 PE=2 SV=1
Length = 521
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCIT 169
R N+++ F GL+ L L L+ H + +++G L +++ L + N IT
Sbjct: 73 RYNSLSELRAGQFTGLMQLTWLYLD-----HNHICSVQGDAFQKLRRVKELTLS-SNQIT 126
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ NL+S+ +S +K+ GL+KLT L++ + + S
Sbjct: 127 QLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS 186
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L +L++ QL F+ + L L+L N++ H L +L SL L +
Sbjct: 187 LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA 246
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
+ +L + NLE ++LS I + L+SL LD+ ++T L S
Sbjct: 247 I-VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYVEPRILNSWKS 305
Query: 350 LTHLDLFGARITDSG------AAYLRNFK 372
LT + L G + D G A++L NF+
Sbjct: 306 LTSITLAG-NLWDCGRNVCALASWLSNFQ 333
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 6/225 (2%)
Query: 229 SLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ YL+ N C + D F K+ +K L L N+IT + + NL S++L
Sbjct: 92 TWLYLDHNHICSVQGDA---FQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNK 148
Query: 288 IGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 347
+ GL L ++++ I +R SLK L++ Q+ + L
Sbjct: 149 LQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGL 208
Query: 348 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNC 407
LT L L + A+ +L SL + + V + + +L ++LS N
Sbjct: 209 FKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIV-VSSLDWVWNLEKMDLSGN- 266
Query: 408 NLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+ + + L SL + ++R+T R L K+L S+TL
Sbjct: 267 EIEYMEPHVFETVPHLQSLQLDSNRLTYVEPRILNSWKSLTSITL 311
Score = 39.7 bits (91), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 1/164 (0%)
Query: 295 NLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 354
TGL L + L I L +K L L + QIT + L +D
Sbjct: 84 QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVD 143
Query: 355 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 414
L ++ + L +L + + V+ +D SL L++ N L
Sbjct: 144 LSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN-QLKSLAR 202
Query: 415 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 458
+GL L L++ ++ + H L +L SL L KV
Sbjct: 203 NSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA 246
>sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1
Length = 479
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 25/225 (11%)
Query: 20 LTEVSLEAFRDCALQDLCLGQYPGVNDKWMDVIASQGSSLLSVDL-SGSDVTDSGLIHL- 77
L E+SL+A+ + D L + A QG S ++ L S ++T+ G++++
Sbjct: 270 LAELSLQAYH---VTDTALAYF----------TARQGHSTHTLRLLSCWEITNHGVVNVV 316
Query: 78 KDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLSFRRNNAITAQGMKAFA-GLINLVK 135
NL SL + C +++D G+E + L L SL IT ++ A L L +
Sbjct: 317 HSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEE 376
Query: 136 LDLERCTRI-HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQIS-CSKVT 193
L L+RC RI GL L + L SL ++WC + D +K L + NL+ L ++ C +T
Sbjct: 377 LVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRNLRLLSLAGCPLLT 436
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+G++ L LQ+L L L CP + L F +L RC
Sbjct: 437 TTGLSGLVQLQELEELELTNCP------GATPELFKYFSQHLPRC 475
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 47/264 (17%)
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSC------ 286
+L+ C+ D+ SK G +K ++L + ITD L V L+ + + L L C
Sbjct: 178 DLDICEFIDN--YSLSKKG-VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEA 234
Query: 287 GIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT- 345
G+ +T L+ + IN++ I+ ++ +L L +L L+L A +TDT LA T
Sbjct: 235 GLWSSLSARITSLSVSDCINVADDAIA--AISQL--LPNLAELSLQAYHVTDTALAYFTA 290
Query: 346 ---------------------------SLTGLTHLDLFG-ARITDSGAAYL-RNFKNLRS 376
SL LT L L G +++TD G + N + LRS
Sbjct: 291 RQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRS 350
Query: 377 LEICG-GGLTDAGVKHIK-DLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS-RI 433
L++ +TD ++++ DL L L L + +TD L +S ++ L SL + ++
Sbjct: 351 LDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQV 410
Query: 434 TSAGLRHLKPLKNLRSLTLESCKV 457
GL+HL ++NLR L+L C +
Sbjct: 411 QDFGLKHLLAMRNLRLLSLAGCPL 434
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 28/272 (10%)
Query: 102 LRGLSNLTSLSFRRNNAITAQGMKAF---------AGL-------INLVKLDLERCTRIH 145
L G+S+L F N +++ +G+KA AGL +V+L+L C
Sbjct: 173 LVGVSDLDICEFIDNYSLSKKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFT 232
Query: 146 GGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGL-TNLKSLQISCSKVTDSGIAYL---K 201
+ ++ SL++ C + D + +S L NL L + VTD+ +AY +
Sbjct: 233 EAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQ 292
Query: 202 GLQKLTLLNLEGCPVT-AACLDSLSALGSLFYLNLNRC-QLSDDGCEKFSK-IGSLKVLN 258
G TL L +T ++ + +L +L L+L+ C +++DDG E ++ + L+ L+
Sbjct: 293 GHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLD 352
Query: 259 LGF-NEITDECLVHLK-GLTNLESLNLDSC-GIGDEGLVNLTGLTNLESINLSF-TGISD 314
L + ITD L ++ L LE L LD C I D GL L+ +++L S+ L + + D
Sbjct: 353 LSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQD 412
Query: 315 GSLRKLAGLSSLKSLNLDA-RQITDTGLAALT 345
L+ L + +L+ L+L +T TGL+ L
Sbjct: 413 FGLKHLLAMRNLRLLSLAGCPLLTTTGLSGLV 444
>sp|Q9BXB1|LGR4_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Homo
sapiens GN=LGR4 PE=2 SV=2
Length = 951
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 6/228 (2%)
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
K LSGL LK L + +++ ++GL L L L+ +T+ DS L L +L
Sbjct: 99 KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHL 158
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
L+ L++ S + +L+ L L N+I+ L++L L+L + I
Sbjct: 159 WLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQ 218
Query: 294 VNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHL 353
GL NLE+++L++ + + + + L SLK L + I+ A L +
Sbjct: 219 HCFDGLDNLETLDLNYNNLGEFP-QAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTI 277
Query: 354 DLFGARITDSGAAYLRNFKNLRSLEICGGGLTD-----AGVKHIKDLS 396
L+ ++ G + N +L SL I G + G H++ L+
Sbjct: 278 HLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLT 325
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 127/320 (39%), Gaps = 35/320 (10%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
LS T ++L IS + +T K L L L G ++ +LS L L L L
Sbjct: 55 LSAFT--QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTL 112
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
QL E + +L+ L L N IT +GL L L LD + + +
Sbjct: 113 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHP 172
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
L+ L L+++ L+ IS LSSL L+L +I L L LDL
Sbjct: 173 LSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDL 232
Query: 356 FGARITDSGAAY--LRNFKNL----RSLEICGGGLTDAG----VKHIKDLSSLTLLNLSQ 405
+ + A L + K L S+ + G D H+ D + L+ + S
Sbjct: 233 NYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYD-NPLSFVGNSA 291
Query: 406 NCNLTD---------KTLELISGLTGLV---SLNVSNSRITSAGLRHLKPLKNLRSLTLE 453
NL+D ++ LTG V SL ++ ++I+S + K LR+L L
Sbjct: 292 FHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDL- 350
Query: 454 SCKVTANDIKRLQSRDLPNL 473
+ N+I RDLP+
Sbjct: 351 ----SYNNI-----RDLPSF 361
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 13/279 (4%)
Query: 104 GLSNLTSLSFRR--NNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLN 161
+NL+SL NN I + F GL NL LDL + +K L L+ L
Sbjct: 196 AFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNY-NNLGEFPQAIKALPSLKELG 254
Query: 162 IKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACL 221
N I+ G L+++ + + ++ G + L L L + G +
Sbjct: 255 FH-SNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQ-F 312
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
+L+ L L L ++S + L+ L+L +N I D L G LE +
Sbjct: 313 PNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRD--LPSFNGCHALEEI 370
Query: 282 NLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 341
+L I GL +L ++LS I + R A L + +L++ ++T
Sbjct: 371 SLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSF-- 428
Query: 342 AALTSLTGLTHLDLFG-ARITDSGAAYLRNFKNLRSLEI 379
L GL L L G ++ ++ AA ++F NLRSL +
Sbjct: 429 -PTEGLNGLNQLKLVGNFKLKEALAA--KDFVNLRSLSV 464
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 172/414 (41%), Gaps = 88/414 (21%)
Query: 79 DCSNLQSLD-FNFCIQISDGGLEHL--RGLSNLTSLSFRRNNAITAQGMKAFAGLI-NLV 134
D SN Q +D F F + +E+L R L LS + + ++ F NL
Sbjct: 93 DGSNWQRVDLFTFQRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLE 152
Query: 135 KLDLERCTRI-HGGLVNL-KGLMKLESLNIKWCNCITDSDMKPL-SGLTNLKSLQIS-CS 190
L L RC R+ NL + KL LN++ C+ ITD MK + G NL L IS C
Sbjct: 153 HLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCD 212
Query: 191 KVTDSGIAY-LKGLQKLTLLNLEGCP-VTAACLDSLSA-LGSLFYLNLNRC-QLSDDGCE 246
+ D G+ L + L L L GC +T S+ A +G++ LNL +C QL+D +
Sbjct: 213 AIQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQ 272
Query: 247 KFSK-IGSLKVLNLG-FNEITDECLVHL-KGLTNLESLNLDSCGI-GDEGLVNLT-GLTN 301
+ +L+ L + N+I+D LV L + NL+ L L C + GD G + L G
Sbjct: 273 NIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQ 332
Query: 302 LESINLSFTG-ISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARI 360
LE +++ ISD ++ LA AL L+ L+H +L I
Sbjct: 333 LERLDMEDCSLISDHTINSLAN-----------------NCTALRELS-LSHCEL----I 370
Query: 361 TDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGL 420
TD +NL S KH + L+ L L N Q LTD T
Sbjct: 371 TDES------IQNLAS-------------KHRETLNVLELDNCPQ---LTDST------- 401
Query: 421 TGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK-VTANDIKRLQSRDLPNL 473
L HL+ K L+ + L C+ V+ I R Q PN+
Sbjct: 402 -----------------LSHLRHCKALKRIDLYDCQNVSKEAIVRFQHHR-PNI 437
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 150/346 (43%), Gaps = 50/346 (14%)
Query: 56 GSSLLSVDLSG-SDVTDSGL-IHLKDCSNLQSLDFNFCIQISDGGLEHL-RGLSNLTSLS 112
G L + L G +V DS L C NL+ L C +++D E+L R L L+
Sbjct: 122 GGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLN 181
Query: 113 FRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSD 172
++IT + MK G L LNI WC+ I D
Sbjct: 182 LENCSSITDRAMKYIGD-----------------------GCPNLSYLNISWCDAIQDRG 218
Query: 173 MKPLSGLTNLKSLQI----SCSKVTD----SGIAYLKGLQKLTLLN-LEGCPVTAACLDS 223
++ + L+N KSL C +T+ S A++ ++KL LL + +T +
Sbjct: 219 VQII--LSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQ--NI 274
Query: 224 LSALGSLFYLNLNRC-QLSDDGCEKFSKIG-SLKVLNL-GFNEITDECLVHL-KGLTNLE 279
+ +L YL ++ C Q+SD + +LKVL L G + D + L +G LE
Sbjct: 275 ANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLE 334
Query: 280 SLNLDSCGIGDEGLVN--LTGLTNLESINLSFTG-ISDGSLRKLAG--LSSLKSLNLD-A 333
L+++ C + + +N T L ++LS I+D S++ LA +L L LD
Sbjct: 335 RLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESIQNLASKHRETLNVLELDNC 394
Query: 334 RQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEI 379
Q+TD+ L+ L L +DL+ + S A +R + ++EI
Sbjct: 395 PQLTDSTLSHLRHCKALKRIDLYDCQNV-SKEAIVRFQHHRPNIEI 439
>sp|Q149C3|LIGO4_MOUSE Leucine-rich repeat and immunoglobulin-like domain containing-NOGO
receptor-interacting protein 4 OS=Mus musculus GN=Lingo4
PE=2 SV=2
Length = 593
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 17/268 (6%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCP---VTAACLDSLSALGSLFY 232
LS L L+ L +S ++++ GLQ L L L+G V L+AL +L
Sbjct: 80 LSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTAL-TLLD 138
Query: 233 LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG---IG 289
L LN+ L DG FS++GSL+ L +G N + GL L ++ L+ C +
Sbjct: 139 LRLNQIVLFLDGA--FSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVP 196
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
L L L L L + G+LR L L L+ + + + D G SL G
Sbjct: 197 GLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPG-----SLVG 251
Query: 350 LTHLDLFGARITDSGAAY--LRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNC 407
L L R S + L + LR L++ ++ + + L L L LS C
Sbjct: 252 LNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGAC 311
Query: 408 NLTDKTLELISGLTGLVSLNVSNSRITS 435
LT GLT L+V+++ + +
Sbjct: 312 -LTSIAAHAFHGLTAFHLLDVADNALQT 338
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 15/243 (6%)
Query: 224 LSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNL 283
LS LG L L+L+ QLS F + SL L L N + GLT L L+L
Sbjct: 80 LSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDL 139
Query: 284 DSCGIG---DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 340
I D L L LE + ++ G+ AGL+ L ++ L+ ++
Sbjct: 140 RLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAF---AGLAKLSTITLERCNLSTVP 196
Query: 341 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTL 400
AL L L L L I A LR L+ LEI +A D SL
Sbjct: 197 GLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEA-----LDPGSLVG 251
Query: 401 LNLSQ----NCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCK 456
LNLS CNL+ + + L+ L L++S + I++ R L PL L+ L L
Sbjct: 252 LNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGAC 311
Query: 457 VTA 459
+T+
Sbjct: 312 LTS 314
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 88/235 (37%), Gaps = 35/235 (14%)
Query: 58 SLLSVDLSGSD--VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRR 115
SLL++ L G+ + G+ L L N + DG L L L
Sbjct: 109 SLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEV----G 164
Query: 116 NNAITAQGMKAFAGLINLVKLDLERCT--------------------------RIHGGLV 149
+N + AFAGL L + LERC R+ G
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAG-- 222
Query: 150 NLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLL 209
L+GL +L+ L I + D L GL NL SL I+ ++ L L L +L
Sbjct: 223 ALRGLGQLKELEIHHWPSLEALDPGSLVGL-NLSSLAITRCNLSSVPFQALHHLSFLRIL 281
Query: 210 NLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEI 264
+L P++A LS L L L L+ L+ F + + +L++ N +
Sbjct: 282 DLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNAL 336
>sp|D4A6D8|LRRT1_RAT Leucine-rich repeat transmembrane neuronal protein 1 OS=Rattus
norvegicus GN=Lrrtm1 PE=3 SV=1
Length = 523
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 19/269 (7%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCIT 169
R N+++ F GL+ L L L+ H + +++G L +++ L + N IT
Sbjct: 73 RYNSLSELRAGQFTGLMQLTWLYLD-----HNHICSVQGDAFQKLRRVKELTLS-SNQIT 126
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ + NL+S+ +S +K+ GL+KLT L++ + + S
Sbjct: 127 ELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS 186
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L +L++ QL F+ + L L+L N++ H L +L SL L +
Sbjct: 187 LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVA 246
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
+ +L + NLE ++LS I + L+SL LD+ ++T L S
Sbjct: 247 I-VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTYIEPRILNSWKS 305
Query: 350 LTHLDLFGARITDSG------AAYLRNFK 372
LT + L G + D G A++L NF+
Sbjct: 306 LTSITLAG-NLWDCGRNVCALASWLSNFQ 333
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 1/164 (0%)
Query: 295 NLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 354
TGL L + L I L +K L L + QIT+ + L +D
Sbjct: 84 QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVD 143
Query: 355 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 414
L ++ + L +L + + V+ +D SL L++ N L
Sbjct: 144 LSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN-QLKSLAR 202
Query: 415 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 458
+GL L L++ ++ + H L +L SL L KV
Sbjct: 203 NSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVA 246
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 6/225 (2%)
Query: 229 SLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ YL+ N C + D F K+ +K L L N+IT+ + + NL S++L
Sbjct: 92 TWLYLDHNHICSVQGDA---FQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNK 148
Query: 288 IGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 347
+ GL L ++++ I +R SLK L++ Q+ + L
Sbjct: 149 LQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGL 208
Query: 348 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNC 407
LT L L + A+ +L SL + + V + + +L ++LS N
Sbjct: 209 FKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVAIV-VSSLDWVWNLEKMDLSGN- 266
Query: 408 NLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+ + + L SL + ++R+T R L K+L S+TL
Sbjct: 267 EIEYMEPHVFETVPYLQSLQLDSNRLTYIEPRILNSWKSLTSITL 311
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 6/167 (3%)
Query: 309 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 368
+ +S+ + GL L L LD I A L + L L +IT+
Sbjct: 74 YNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTF 133
Query: 369 RNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNV 428
R NLRS+++ L L LT L++ N + + + L L++
Sbjct: 134 RPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANA-IQFVPVRIFQDCRSLKFLDI 192
Query: 429 SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 475
+++ S L L L LE ND+ ++ P L+S
Sbjct: 193 GYNQLKSLARNSFAGLFKLTELHLEH-----NDLIKVNFAHFPRLIS 234
>sp|Q9N008|LIGO1_MACFA Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Macaca fascicularis
GN=LINGO1 PE=2 SV=1
Length = 614
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 114/269 (42%), Gaps = 17/269 (6%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 291 EGLVNLTGLTNLESINLSFTGIS--DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 348
+ + L L +NLS+ IS +GS+ L L L+ + L Q+ A L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPISTIEGSM--LHELLRLQEIQLVGGQLAMVEPYAFRGLN 329
Query: 349 GLTHLDLFGARITDSGAAYLRNFKNLRSL 377
L L++ G ++T + + NL +L
Sbjct: 330 YLRVLNVSGNQLTTLEESVFHSVGNLETL 358
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 24/183 (13%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLTNLES 304
F + +LK L +G N++ GL +LE L L+ C I E L +L GL L
Sbjct: 157 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 216
Query: 305 INLSFTGISDGSLRKLAGLSSLK----------------SLNLDARQITDTGLAALT--- 345
+L+ I D S ++L L L+ LNL + IT L A+
Sbjct: 217 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 276
Query: 346 --SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 403
L L L+L I+ + L L+ +++ GG L + L+ L +LN+
Sbjct: 277 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAMVEPYAFRGLNYLRVLNV 336
Query: 404 SQN 406
S N
Sbjct: 337 SGN 339
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
+LE + L+ +S L +L++L L + ++ L T L+ LT LD+
Sbjct: 85 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 144
Query: 356 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 415
+I ++ NL+SLE+ L + L+SL L L + CNLT E
Sbjct: 145 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL-EKCNLTSIPTE 203
Query: 416 LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+S L GL+ L + + I + K L L+ L +
Sbjct: 204 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 240
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D ++ L L LN +S F+ + +L+ L L N + L GL+NL L
Sbjct: 83 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 142
Query: 282 NLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 341
++ I L NL+S+ + + S R +GL+SL+ L L+ +T
Sbjct: 143 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 202
Query: 342 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLL 401
AL+ L GL L L I + L+ LEI D + L L L
Sbjct: 203 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC--LYGLNLT 260
Query: 402 NLS-QNCNLTDKTLELISGLTGLVSLNVSNSRITS 435
+LS +CNLT + L L LN+S + I++
Sbjct: 261 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST 295
>sp|Q5RDJ4|LIGO1_PONAB Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Pongo abelii GN=LINGO1
PE=2 SV=1
Length = 614
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 114/269 (42%), Gaps = 17/269 (6%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 99 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 156
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 157 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 216 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 271
Query: 291 EGLVNLTGLTNLESINLSFTGIS--DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 348
+ + L L +NLS+ IS +GS+ L L L+ + L Q+ A L
Sbjct: 272 VPYLAVRHLVYLRFLNLSYNPISTIEGSM--LHELLRLQEIQLVGGQLAVVEPYAFRGLN 329
Query: 349 GLTHLDLFGARITDSGAAYLRNFKNLRSL 377
L L++ G ++T + + NL +L
Sbjct: 330 YLRVLNVSGNQLTTLEESVFHSVGNLETL 358
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 24/183 (13%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLTNLES 304
F + +LK L +G N++ GL +LE L L+ C I E L +L GL L
Sbjct: 157 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 216
Query: 305 INLSFTGISDGSLRKLAGLSSLK----------------SLNLDARQITDTGLAALT--- 345
+L+ I D S ++L L L+ LNL + IT L A+
Sbjct: 217 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 276
Query: 346 --SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 403
L L L+L I+ + L L+ +++ GG L + L+ L +LN+
Sbjct: 277 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 336
Query: 404 SQN 406
S N
Sbjct: 337 SGN 339
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
+LE + L+ +S L +L++L L + ++ L T L+ LT LD+
Sbjct: 85 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 144
Query: 356 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 415
+I ++ NL+SLE+ L + L+SL L L + CNLT E
Sbjct: 145 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL-EKCNLTSIPTE 203
Query: 416 LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+S L GL+ L + + I + K L L+ L +
Sbjct: 204 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 240
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D ++ L L LN +S F+ + +L+ L L N + L GL+NL L
Sbjct: 83 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 142
Query: 282 NLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 341
++ I L NL+S+ + + S R +GL+SL+ L L+ +T
Sbjct: 143 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 202
Query: 342 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLL 401
AL+ L GL L L I + L+ LEI D + L L L
Sbjct: 203 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC--LYGLNLT 260
Query: 402 NLS-QNCNLTDKTLELISGLTGLVSLNVSNSRITS 435
+LS +CNLT + L L LN+S + I++
Sbjct: 261 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST 295
>sp|Q96FE5|LIGO1_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Homo sapiens GN=LINGO1
PE=1 SV=2
Length = 620
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 114/269 (42%), Gaps = 17/269 (6%)
Query: 117 NAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMK 174
N ++A AF L NL L L R I G+ GL L L+I + D
Sbjct: 105 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV--FTGLSNLTKLDISENKIVILLDYM 162
Query: 175 PLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLN 234
L NLKSL++ + + GL L L LE C +T+ ++LS L L L
Sbjct: 163 -FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 235 LNRCQLSDDGCEKFSKIGSLKVLNLG----FNEITDECLVHLKGLTNLESLNLDSCGIGD 290
L ++ F ++ LKVL + + +T CL L NL SL++ C +
Sbjct: 222 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL----NLTSLSITHCNLTA 277
Query: 291 EGLVNLTGLTNLESINLSFTGIS--DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLT 348
+ + L L +NLS+ IS +GS+ L L L+ + L Q+ A L
Sbjct: 278 VPYLAVRHLVYLRFLNLSYNPISTIEGSM--LHELLRLQEIQLVGGQLAVVEPYAFRGLN 335
Query: 349 GLTHLDLFGARITDSGAAYLRNFKNLRSL 377
L L++ G ++T + + NL +L
Sbjct: 336 YLRVLNVSGNQLTTLEESVFHSVGNLETL 364
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 24/183 (13%)
Query: 248 FSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSC---GIGDEGLVNLTGLTNLES 304
F + +LK L +G N++ GL +LE L L+ C I E L +L GL L
Sbjct: 163 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 222
Query: 305 INLSFTGISDGSLRKLAGLSSLK----------------SLNLDARQITDTGLAALT--- 345
+L+ I D S ++L L L+ LNL + IT L A+
Sbjct: 223 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 282
Query: 346 --SLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNL 403
L L L+L I+ + L L+ +++ GG L + L+ L +LN+
Sbjct: 283 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 342
Query: 404 SQN 406
S N
Sbjct: 343 SGN 345
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
+LE + L+ +S L +L++L L + ++ L T L+ LT LD+
Sbjct: 91 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 150
Query: 356 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 415
+I ++ NL+SLE+ L + L+SL L L + CNLT E
Sbjct: 151 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL-EKCNLTSIPTE 209
Query: 416 LISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+S L GL+ L + + I + K L L+ L +
Sbjct: 210 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 246
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
D ++ L L LN +S F+ + +L+ L L N + L GL+NL L
Sbjct: 89 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 148
Query: 282 NLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGL 341
++ I L NL+S+ + + S R +GL+SL+ L L+ +T
Sbjct: 149 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 208
Query: 342 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLL 401
AL+ L GL L L I + L+ LEI D + L L L
Sbjct: 209 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC--LYGLNLT 266
Query: 402 NLS-QNCNLTDKTLELISGLTGLVSLNVSNSRITS 435
+LS +CNLT + L L LN+S + I++
Sbjct: 267 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST 301
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 134/349 (38%), Gaps = 40/349 (11%)
Query: 117 NAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN-LKGLMKLESLNIKWCNCITDSDMKP 175
N ITA +AF G+ L LDL R+ G L + GL+ L L + N IT +
Sbjct: 252 NLITAVAPRAFLGMKALRWLDLSH-NRVAGLLEDTFPGLLGLHVLRLA-HNAITSLRPRT 309
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNL 235
L L+ LQ+ +++ G +GL G L L L
Sbjct: 310 FKDLHFLEELQLGHNRIRQLGEKTFEGL------------------------GQLEVLTL 345
Query: 236 NRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
N Q+ + F + ++ V+NL N + +GL L SL+L+ +G L
Sbjct: 346 NDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHT 405
Query: 296 LTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDL 355
GL+ L + L IS + LAGLS L L+L A Q+T L L +L L
Sbjct: 406 FAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLL 465
Query: 356 FGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLE 415
++T L + L++ L L L LNL N +L+
Sbjct: 466 SNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNN------SLQ 519
Query: 416 LISGLTGLVSLNV-SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIK 463
GL L + +N S PLK LR L++ V ++
Sbjct: 520 TFVPQPGLERLWLDANPWDCSC------PLKALRDFALQNPGVVPRFVQ 562
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 151/386 (39%), Gaps = 41/386 (10%)
Query: 81 SNLQSLDFNFCIQISDGGLEHLR-----GLSNLTSLSFRRNNAITAQGMKAFAGLINLVK 135
NL SLDF + + L L GL NL L RN + + F +L
Sbjct: 95 QNLSSLDF---LNLQGSWLRSLEPQALLGLQNLYHLHLERN-LLRSLAAGLFRHTPSLAS 150
Query: 136 LDL--ERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVT 193
L L R+ GL +GL L LN+ W + + D GL NL L ++ +K+T
Sbjct: 151 LSLGNNLLGRLEEGL--FRGLSHLWDLNLGWNSLVVLPDTV-FQGLGNLHELVLAGNKLT 207
Query: 194 DSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGS 253
A L GL +L L+L + + + L L L L+R ++ F + +
Sbjct: 208 YLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKA 267
Query: 254 LKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGIS 313
L+ L+L N + GL L L L I L LE + L I
Sbjct: 268 LRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIR 327
Query: 314 DGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKN 373
+ GL L+ L L+ QI + + A L + ++L G
Sbjct: 328 QLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSG--------------NC 373
Query: 374 LRSLEICGGGLTDAGVKHI-KDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSR 432
LRSL +H+ + L L L+L +C L L +GL+GL L + ++
Sbjct: 374 LRSLP-----------EHVFQGLGRLHSLHLEHSC-LGRIRLHTFAGLSGLRRLFLRDNS 421
Query: 433 ITSAGLRHLKPLKNLRSLTLESCKVT 458
I+S + L L L L L + ++T
Sbjct: 422 ISSIEEQSLAGLSELLELDLTANQLT 447
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 93 QISDGGLEHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLK 152
QI + + GL N+ ++ N + + F GL L L LE L
Sbjct: 349 QIHEVKVGAFFGLFNVAVMNLS-GNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFA 407
Query: 153 GLMKLESLNIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLE 212
GL L L ++ N I+ + + L+GL+ L L ++ +++T +GL +L L L
Sbjct: 408 GLSGLRRLFLR-DNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLS 466
Query: 213 GCPVTAACLDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHL 272
+T D L L F+L+L+ +L FS +G L+ LNL N + + V
Sbjct: 467 NNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSL--QTFVPQ 524
Query: 273 KGLTNLESLNLDS 285
G LE L LD+
Sbjct: 525 PG---LERLWLDA 534
>sp|Q65Z91|TSK_CHICK Tsukushin OS=Gallus gallus GN=TSKU PE=1 SV=1
Length = 369
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 122/284 (42%), Gaps = 63/284 (22%)
Query: 177 SGLTNLKSLQIS---CSKVTDSGIAYLKGLQKLTLLN--LEGCPVTAACLDSLSALGSLF 231
G T L SL +S +K++ + + L+ L+ L L + LE P C S S LG +
Sbjct: 83 PGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLP--EDCFSS-SPLGDI- 138
Query: 232 YLNLNRCQLSDDGCEKFSKIGSLKVLN--LGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
+L+ +L D + F+ G K LN L N ++ H K + N+++LNL G
Sbjct: 139 --DLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSIPNIQNLNLS----G 192
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
+ LT + NL+ I L + LNLD + L G
Sbjct: 193 NR----LTSVPNLQGIPLRY-------------------LNLDGNPLAKIEKGDFKGLKG 229
Query: 350 LTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNL 409
L HL L G L +F+ L K+L +L +L+LS N NL
Sbjct: 230 LIHLSLSG----------LHDFRELSPYSF-------------KELPALQVLDLSNNPNL 266
Query: 410 TDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLE 453
T E+I GL + LN+S + ++S LK L +L+S+TL
Sbjct: 267 RSLTAEVIFGLNSIQELNLSGTGVSSLPKTVLKYLPSLKSITLR 310
>sp|Q5MJ12|FXL16_RAT F-box/LRR-repeat protein 16 OS=Rattus norvegicus GN=Fbxl16 PE=2
SV=1
Length = 479
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 22/237 (9%)
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECL-VHLKGLTNLESLNLDSC------ 286
+L+ C+ D+ SK G +K ++L + ITD L V L+ + + L L C
Sbjct: 178 DLDICEFIDN--YSLSKKG-VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEA 234
Query: 287 GIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS 346
G+ +T L+ + IN++ I+ ++ +L L +L L+L A +TDT LA T+
Sbjct: 235 GLWSSLSARITSLSVSDCINVADDAIA--AISQL--LPNLAELSLQAYHVTDTALAYFTA 290
Query: 347 LTGL-TH-LDLFGA-RITDSGAA-YLRNFKNLRSLEICG-GGLTDAGVKHI-KDLSSLTL 400
G TH L L IT+ G + + NL SL + G +TD GV+ + ++L L
Sbjct: 291 RQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRS 350
Query: 401 LNLSQNCNLTDKTLELIS-GLTGLVSLNVSNS-RITSAGLRHLKPLKNLRSLTLESC 455
L+LS +TD LE ++ L L L + RIT GL +L + +LRSL L C
Sbjct: 351 LDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWC 407
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 44 VNDKWMDVIASQGSSLLSVDLSG-SDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHL 102
+ D ++V+ Q ++ ++LSG +D T++GL + + SL + CI ++D + +
Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLS-ARITSLSVSDCINVADDAIAAI 263
Query: 103 RGL-SNLTSLSFRRNNA--------------------------ITAQGM-KAFAGLINLV 134
L NL LS + + IT G+ L NL
Sbjct: 264 SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLT 323
Query: 135 KLDLERCTRIHGGLVNL--KGLMKLESLNIKWCNCITDSDMKPLS-GLTNLKSLQI-SCS 190
L L C+++ V L + L KL SL++ WC ITD ++ ++ L L+ L + C
Sbjct: 324 SLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCV 383
Query: 191 KVTDSGIAYLKGLQKLTLLNLEG-CPVTAACLDSLSALGSLFYLNLNRCQL 240
++TD+G++YL + L L L C V L L A+ SL L+L C L
Sbjct: 384 RITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPL 434
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 64/290 (22%)
Query: 182 LKSLQISCSKVTDSGI-AYLKGLQKLTLLNLEGCP--VTAACLDSLSALGSLFYLNLNRC 238
+K++ + S +TD+G+ L+ +Q + L L GC A SLSA + L+++ C
Sbjct: 195 VKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSA--RITSLSVSDC 252
Query: 239 -QLSDDGCEKFSKI-GSLKVLNLGFNEITDECLVHLKGLT--NLESLNLDSCG-IGDEGL 293
++DD S++ +L L+L +TD L + + +L L SC I + G+
Sbjct: 253 INVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGV 312
Query: 294 VNLT-GLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTS-LTGLT 351
VN+ L NL S++LS G S ++TD G+ + L L
Sbjct: 313 VNVVHSLPNLTSLSLS--GCS---------------------KVTDDGVELVAENLRKLR 349
Query: 352 HLDL-FGARITDSGAAYLR-NFKNLRSLEI--CGGGLTDAGVKHIKDLSSLTLLNLSQNC 407
LDL + RITD Y+ + L L + C +TD G+ ++ +SSL L L C
Sbjct: 350 SLDLSWCPRITDMALEYVACDLHRLEELVLDRCVR-ITDTGLSYLSTMSSLRSLYLRWCC 408
Query: 408 NLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKV 457
+ D GL+HL +++LR L+L C +
Sbjct: 409 QVQD------------------------FGLKHLLAMRSLRLLSLAGCPL 434
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 69 VTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGM 124
+TD+GL +L S+L+SL +C Q+ D GL+HL + +L LS +T G+
Sbjct: 385 ITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLAMRSLRLLSLAGCPLLTTTGL 440
>sp|Q8K377|LRRT1_MOUSE Leucine-rich repeat transmembrane neuronal protein 1 OS=Mus
musculus GN=Lrrtm1 PE=2 SV=1
Length = 522
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 19/269 (7%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCIT 169
R N+++ F GL+ L L L+ H + +++G L +++ L + N IT
Sbjct: 73 RYNSLSELRAGQFTGLMQLTWLYLD-----HNHICSVQGDAFQKLRRVKELTLS-SNQIT 126
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ + NL+S+ +S +K+ GL+KLT L++ + + S
Sbjct: 127 ELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS 186
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L +L++ QL F+ + L L+L N++ H L +L SL L +
Sbjct: 187 LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVA 246
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
+ +L + NLE ++LS I + L++L LD+ ++T L S
Sbjct: 247 I-VVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQLDSNRLTYIEPRILNSWKS 305
Query: 350 LTHLDLFGARITDSG------AAYLRNFK 372
LT + L G + D G A++L NF+
Sbjct: 306 LTSITLAG-NLWDCGRNVCALASWLSNFQ 333
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 1/164 (0%)
Query: 295 NLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 354
TGL L + L I L +K L L + QIT+ + L +D
Sbjct: 84 QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVD 143
Query: 355 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 414
L ++ + L +L + + V+ +D SL L++ N L
Sbjct: 144 LSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN-QLKSLAR 202
Query: 415 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 458
+GL L L++ ++ + H L +L SL L KV
Sbjct: 203 NSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVA 246
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 6/225 (2%)
Query: 229 SLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ YL+ N C + D F K+ +K L L N+IT+ + + NL S++L
Sbjct: 92 TWLYLDHNHICSVQGDA---FQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNK 148
Query: 288 IGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 347
+ GL L ++++ I +R SLK L++ Q+ + L
Sbjct: 149 LQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGL 208
Query: 348 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNC 407
LT L L + A+ +L SL + + V + + +L ++LS N
Sbjct: 209 FKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVAIV-VSSLDWVWNLEKMDLSGN- 266
Query: 408 NLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+ + + L +L + ++R+T R L K+L S+TL
Sbjct: 267 EIEYMEPHVFETVPYLQTLQLDSNRLTYIEPRILNSWKSLTSITL 311
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 6/167 (3%)
Query: 309 FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYL 368
+ +S+ + GL L L LD I A L + L L +IT+
Sbjct: 74 YNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTF 133
Query: 369 RNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNV 428
R NLRS+++ L L LT L++ N + + + L L++
Sbjct: 134 RPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANA-IQFVPVRIFQDCRSLKFLDI 192
Query: 429 SNSRITSAGLRHLKPLKNLRSLTLESCKVTANDIKRLQSRDLPNLVS 475
+++ S L L L LE ND+ ++ P L+S
Sbjct: 193 GYNQLKSLARNSFAGLFKLTELHLEH-----NDLIKVNFAHFPRLIS 234
>sp|Q99MB1|TLR3_MOUSE Toll-like receptor 3 OS=Mus musculus GN=Tlr3 PE=1 SV=2
Length = 905
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 137/363 (37%), Gaps = 71/363 (19%)
Query: 64 LSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQG 123
L+ S+ T SGL +NL LD ++ + D G L +L LS NN I
Sbjct: 262 LATSESTFSGL----KWTNLTQLDLSYN-NLHDVGNGSFSYLPSLRYLSLEYNN-IQRLS 315
Query: 124 MKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKWC----------NCITDSDM 173
++F GL NL L L+R V+L ++ + +W N I +
Sbjct: 316 PRSFYGLSNLRYLSLKRAFTKQS--VSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKS 373
Query: 174 KPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYL 233
+GL +LK L S SK S L+ L T ++L P L L
Sbjct: 374 NTFTGLVSLKYL--SLSKTFTS----LQTLTNETFVSLAHSP--------------LLTL 413
Query: 234 NLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGL 293
NL + +S FS +G L++L+LG NEI + G E
Sbjct: 414 NLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKL-------------------SGQEW- 453
Query: 294 VNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLD--ARQITDTGLAALTSLTGLT 351
GL N+ I LS+ S A + SL+ L L A + D + L LT
Sbjct: 454 ---RGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLT 510
Query: 352 HLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTD--------AGVKHIKDLSSLTLLNL 403
LDL I + L +NL L+ L V +K LS L +LNL
Sbjct: 511 ILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNL 570
Query: 404 SQN 406
N
Sbjct: 571 ESN 573
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%)
Query: 276 TNLESLNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQ 335
+N+ LNL + N T + L ++ F IS L LK LNL +
Sbjct: 52 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 111
Query: 336 ITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLT 385
++ T LT LDL I + +N KNL L++ GL+
Sbjct: 112 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLS 161
>sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus GN=Gp5 PE=3 SV=1
Length = 567
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 132/331 (39%), Gaps = 32/331 (9%)
Query: 176 LSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTA---ACLDSLSALGSLFY 232
SG+T L+ L +S S ++ L KL L L ++ A LD + L LF
Sbjct: 70 FSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFL 129
Query: 233 ---------------------LNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVH 271
L LN+ QLS FS +G LKVL+L N +T
Sbjct: 130 DHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGL 189
Query: 272 LKGLTNLESLNLDSCGIG--DEGLV-NLTGLTNLESINLSFTGISDGSLRKLAGLSSLKS 328
L LE L L S + D GL+ NL LT L I+ G+ L LS +
Sbjct: 190 LGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLS---T 246
Query: 329 LNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAG 388
L L + A ++ LT L LF + + LR L + G L
Sbjct: 247 LTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLP 306
Query: 389 VKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLR 448
++LS L L L++N L+ + GLT L L V + + L+ L LR
Sbjct: 307 AAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLR 366
Query: 449 SLTLESCKVTANDIKRLQSRDLPNLVSFRPE 479
++L ++ A + R R+L +LV+ + E
Sbjct: 367 QVSLRHNRLRA--LPRTLFRNLSSLVTVQLE 395
>sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1
SV=1
Length = 628
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 184/435 (42%), Gaps = 86/435 (19%)
Query: 67 SDVTDSGLIHLKD-CSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAITAQGMK 125
S +TD+GL+ + + C+ L+ L+ N C I+D GL +
Sbjct: 188 STITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIA---------------------- 225
Query: 126 AFAGLINLVKLDLERCTRI--HGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSGLT--N 181
NL +L LE C+RI G L + KL+S++IK C + D + L T +
Sbjct: 226 --KSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCS 283
Query: 182 LKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS 241
L L++ VTD +A + G L++ +L A L +S G F++ N L
Sbjct: 284 LAKLKLQMLNVTDVSLAVV-GHYGLSITDL-----VLAGLSHVSEKG--FWVMGNGVGL- 334
Query: 242 DDGCEKFSKIGSLK------VLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGDEGLVN 295
K+ SL V ++G + C K + + L + D GLV+
Sbjct: 335 -------QKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPL------LSDNGLVS 381
Query: 296 LTGLT-NLESINLS---------FTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALT 345
+ +LES+ L F G KL S + L++ R +T TGL A +
Sbjct: 382 FAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSI--RDLT-TGLPASS 438
Query: 346 SLTGLTHLDL-----FGARITDSGAAYLRNF-KNLRSLEICG-GGLTDAGVKHIKDLSSL 398
+ L L + FG D+ A + L +++CG G+T++G H+ SSL
Sbjct: 439 HCSALRSLSIRNCPGFG----DANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQ-SSL 493
Query: 399 TLLNLSQNCNLTDKTLELISGLTG--LVSLNVSN-SRITSAGLRHLKP-LKNLRSLTLES 454
+N S NLTD+ + I+ G L LN+ S IT A L + + L L +
Sbjct: 494 VKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISK 553
Query: 455 CKVTANDIKRLQSRD 469
C ++ + I+ L S D
Sbjct: 554 CAISDSGIQALASSD 568
>sp|Q5R6B1|LRRT1_PONAB Leucine-rich repeat transmembrane neuronal protein 1 OS=Pongo
abelii GN=LRRTM1 PE=2 SV=1
Length = 522
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Query: 115 RNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKG-----LMKLESLNIKWCNCIT 169
R N+++ F GL+ L L L+ H + +++G L +++ L + N IT
Sbjct: 73 RYNSLSELRAGQFTGLMQLTWLYLD-----HNHICSVQGDAFQKLRRVKELTLS-SNQIT 126
Query: 170 DSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGS 229
+ NL+S+ +S +K+ GL+KLT L++ + + S
Sbjct: 127 QLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS 186
Query: 230 LFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L +L++ QL F+ + L L+L N++ H L +L SL L +
Sbjct: 187 LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA 246
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
+ +L + NL+ ++LS I + L+SL LD+ ++T L S
Sbjct: 247 IV-VSSLDWVWNLKKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKS 305
Query: 350 LTHLDLFGARITDSG------AAYLRNFK 372
LT + L G + D G A++L NF+
Sbjct: 306 LTSITLAG-NLWDCGRNVCALASWLSNFQ 333
Score = 38.9 bits (89), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 1/164 (0%)
Query: 295 NLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGLTHLD 354
TGL L + L I L +K L L + QIT + L +D
Sbjct: 84 QFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVD 143
Query: 355 LFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLTDKTL 414
L ++ + L +L + + V+ +D SL L++ N L
Sbjct: 144 LSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYN-QLKSLAR 202
Query: 415 ELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLESCKVT 458
+GL L L++ ++ + H L +L SL L KV
Sbjct: 203 NSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVA 246
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 6/225 (2%)
Query: 229 SLFYLNLNR-CQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCG 287
+ YL+ N C + D F K+ +K L L N+IT + + NL S++L
Sbjct: 92 TWLYLDHNHICSVQGDA---FQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNK 148
Query: 288 IGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSL 347
+ GL L ++++ I +R SLK L++ Q+ + L
Sbjct: 149 LQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGL 208
Query: 348 TGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNC 407
LT L L + A+ +L SL + + V + + +L ++LS N
Sbjct: 209 FKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIV-VSSLDWVWNLKKMDLSGN- 266
Query: 408 NLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTL 452
+ + + L SL + ++R+T R L K+L S+TL
Sbjct: 267 EIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKSLTSITL 311
>sp|P35858|ALS_HUMAN Insulin-like growth factor-binding protein complex acid labile
subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1
Length = 605
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 155/404 (38%), Gaps = 53/404 (13%)
Query: 100 EHLRGLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLE--RCTRIHGGLVNLKGLMKL 157
+ L GL NL L RN + + + FA L L L R +R+ GL +GL L
Sbjct: 116 QALLGLENLCHLHLERNQ-LRSLALGTFAHTPALASLGLSNNRLSRLEDGL--FEGLGSL 172
Query: 158 ESLNIKWCNCITDSD---------------------MKP--LSGLTNLKSLQISCSKVTD 194
LN+ W + D ++P SGL L+ L +S + +
Sbjct: 173 WDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRA 232
Query: 195 SGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRCQLS---DDG------- 244
L +L L L+ + A + L +L +L+L+ +++ +D
Sbjct: 233 IKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 245 --------------CEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIGD 290
F + L+ L LG N I +GL LE L LD + +
Sbjct: 293 RVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQE 352
Query: 291 EGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTGL 350
GLTN+ +NLS + + + GL L SL+L+ + T L+GL
Sbjct: 353 VKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGL 412
Query: 351 THLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTLLNLSQNCNLT 410
L L + L L L++ LT + + L L L LS+N L
Sbjct: 413 RRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN-RLA 471
Query: 411 DKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLKNLRSLTLES 454
+ + + L L+VS++R+ + L PL LR L+L +
Sbjct: 472 ELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRN 515
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 122/306 (39%), Gaps = 8/306 (2%)
Query: 104 GLSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLER---CTRIHGGLVNLKGLMKLESL 160
GL+ L L RN A+ A F L L KL L+R G + LK L L+
Sbjct: 216 GLAELRELDLSRN-ALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLS 274
Query: 161 NIKWCNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAAC 220
+ + + D+ GL L+ L++S + + K L L L L +
Sbjct: 275 HNRVAGLLEDT----FPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLA 330
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLES 280
S LG L L L+ QL + F + ++ V+NL N + + +GL L S
Sbjct: 331 ERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHS 390
Query: 281 LNLDSCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTG 340
L+L+ +G TGL+ L + L G+ + L GL+ L L+L + Q+T
Sbjct: 391 LHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLP 450
Query: 341 LAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGGGLTDAGVKHIKDLSSLTL 400
L L +L L R+ + A L + L++ L + L L
Sbjct: 451 HRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRY 510
Query: 401 LNLSQN 406
L+L N
Sbjct: 511 LSLRNN 516
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 122/311 (39%), Gaps = 33/311 (10%)
Query: 175 PLSGLTNLKSL---QISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLF 231
P + NL SL + ++ L GL+ L L+LE + + L + + +L
Sbjct: 90 PPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALA 149
Query: 232 YLNLNRCQLS--DDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLDSCGIG 289
L L+ +LS +DG F +GSL LNLG+N + +GL +L L L +
Sbjct: 150 SLGLSNNRLSRLEDGL--FEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLA 207
Query: 290 DEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAALTSLTG 349
+GL L ++LS + L L+ L LD I A L
Sbjct: 208 YLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKA 267
Query: 350 LTHLDLFGARI-------------------TDSGAAYL--RNFKNLRSLEICGGG---LT 385
L LDL R+ + + A L R FK+L LE G +
Sbjct: 268 LRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIR 327
Query: 386 DAGVKHIKDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNSRITSAGLRHLKPLK 445
+ + L L +L L N L + GLT + +N+S + + + + + L
Sbjct: 328 QLAERSFEGLGQLEVLTLDHN-QLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLG 386
Query: 446 NLRSLTLE-SC 455
L SL LE SC
Sbjct: 387 KLHSLHLEGSC 397
>sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1
OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1
Length = 1135
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 151/331 (45%), Gaps = 5/331 (1%)
Query: 105 LSNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVNLKGLMKLESLNIKW 164
LSNL L NN IT + LV+ ++ +I G + GL+K ++ + W
Sbjct: 346 LSNLQELMLSSNN-ITGSIPSILSNCTKLVQFQID-ANQISGLIPPEIGLLKELNIFLGW 403
Query: 165 CNCITDSDMKPLSGLTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSL 224
N + + L+G NL++L +S + +T S A L L+ LT L L ++ +
Sbjct: 404 QNKLEGNIPDELAGCQNLQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIPLEI 463
Query: 225 SALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESLNLD 284
SL L L +++ + + + +L L+L N ++ + + L+ LNL
Sbjct: 464 GNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQMLNLS 523
Query: 285 SCGIGDEGLVNLTGLTNLESINLSFTGISDGSLRKLAGLSSLKSLNLDARQITDTGLAAL 344
+ + ++L+ LT L+ +++S ++ L L SL L L ++L
Sbjct: 524 NNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISLNRLILSKNSFNGEIPSSL 583
Query: 345 TSLTGLTHLDLFGARITDSGAAYLRNFKNLR-SLEICGGGLTDAGVKHIKDLSSLTLLNL 403
T L LDL I+ + L + ++L +L + L + I L+ L++L++
Sbjct: 584 GHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPERISALNRLSVLDI 643
Query: 404 SQNCNLTDKTLELISGLTGLVSLNVSNSRIT 434
S N+ L +SGL LVSLN+S++R +
Sbjct: 644 SH--NMLSGDLSALSGLENLVSLNISHNRFS 672
>sp|Q5UQA7|YR542_MIMIV Putative F-box/LRR-repeat protein R542 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R542 PE=4 SV=1
Length = 558
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 190/424 (44%), Gaps = 74/424 (17%)
Query: 60 LSVDLSGSDVTDSGLIHLKDCSNLQSLDFNFCIQISDGGLEHLRGLSNLTSLSFRRNNAI 119
L+V +G ++TD+GL K+ ++ ++ FC +I+D G+E+L L S
Sbjct: 112 LNVSYNG-NITDNGL---KNFQRIKKINLCFCGKITDKGIENLVYGKTLNS--------- 158
Query: 120 TAQGMKAFAGLINLV-KLDLERCTRIHGGLVNLKGLMKLESLNIKWCNCITDSDMKPLSG 178
+ +IN + K++L+ C RI L+ L + S+N+ + + D L
Sbjct: 159 ----DEPIPTVINTIRKINLQCCMRITSKC--LQHLRRARSINMLYGPQTYNED---LQY 209
Query: 179 LTNLKSLQISCSKVTDSGIAYLKGLQKLTLLNLEGCPVTAACLDSLSALGSLFYLNLNRC 238
+ N+++L+I V+D + LK ++ + G + L L L N+
Sbjct: 210 IPNIETLKIDGLDVSDKNLTNLKYVKYIFF----GRNYPVIFMSHLDKLTKLILPNVPEH 265
Query: 239 QLSDDGCEKFSKIGSLKVLNL-GFNEITDECLVHLKGLTNLESLNLDSC-GIGDEGLVNL 296
D F+K+ +L +L G + DE LKGL+ + LNL C I D G L
Sbjct: 266 IEYID----FNKMPNLVKADLSGCINLLDE---QLKGLSKVRKLNLKECYDITDVG---L 315
Query: 297 TGLTNLESINLSF-TGISDGSLRKLAGLSSLKSLNL-DARQITDTGLAALTS----LTGL 350
+ LT ++ IN+S+ I+D L+ LS+ +N+ +IT+ G L + G
Sbjct: 316 SYLTMVKKINISYCFRITDSGLK---YLSNADYVNICGCLKITNEGFFYLKKVPKLVVGY 372
Query: 351 THLDLFGARITDSG-AAYLRNFKNLRSLEICGGGL-----------------TDAGVKHI 392
T L L+ I G YL N + L I G D +K
Sbjct: 373 TTLSLYDCMIDGCGDYEYLTISDNTKQL-ITGKAFHYLENTSQIKIINCNNIIDVDLKSF 431
Query: 393 KDLSSLTLLNLSQNCNLTDKTLELISGLTGLVSLNVSNS-RITSAGLRHLKPLKNLRSLT 451
+L +L+ ++L N+T++ L S L + + +SN+ +I+S G+ + L N + ++
Sbjct: 432 TNLPTLSKIDLRYCNNITNQGL---SALCNIPIVKISNNYQISSKGISY---LTNSKKIS 485
Query: 452 LESC 455
+ESC
Sbjct: 486 IESC 489
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 145/360 (40%), Gaps = 96/360 (26%)
Query: 106 SNLTSLSFRRNNAITAQGMKAFAGLINLVKLDLERCTRIHGGLVN---LKGLMKLESLNI 162
N S SF N +K + RC + +N LK L + SLNI
Sbjct: 42 QNPKSFSFNLKNCNPKDSIKYLQSV---------RCLNLSKSTINDDQLKYLSDVYSLNI 92
Query: 163 KWCNCITDSDMKPLSGLTNLKSLQISCS-KVTDSGIAYLKGLQKLTLLNLEGC-PVTAAC 220
C ITD + LS LT + L +S + +TD+G LK Q++ +NL C +T
Sbjct: 93 SNCKSITD---RGLSFLTQVVKLNVSYNGNITDNG---LKNFQRIKKINLCFCGKITDKG 146
Query: 221 LDSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLG-FNEITDECLVHLK------ 273
+++L +L SD+ + I +++ +NL IT +CL HL+
Sbjct: 147 IENLVYGKTLN---------SDEPIP--TVINTIRKINLQCCMRITSKCLQHLRRARSIN 195
Query: 274 -------------GLTNLESLNLDSCGIGDEGLVNLTGLT-------------------- 300
+ N+E+L +D + D+ L NL +
Sbjct: 196 MLYGPQTYNEDLQYIPNIETLKIDGLDVSDKNLTNLKYVKYIFFGRNYPVIFMSHLDKLT 255
Query: 301 ---------NLESINLS---------FTGISDGSLRKLAGLSSLKSLNL-DARQITDTGL 341
++E I+ + +G + +L GLS ++ LNL + ITD GL
Sbjct: 256 KLILPNVPEHIEYIDFNKMPNLVKADLSGCINLLDEQLKGLSKVRKLNLKECYDITDVGL 315
Query: 342 AALTSLTGLTHLDLFGARITDSGAAYLRNFKNLRSLEICGG-GLTDAGVKHIKDLSSLTL 400
+ LT + + F RITDSG YL N + ICG +T+ G ++K + L +
Sbjct: 316 SYLTMVKKINISYCF--RITDSGLKYL---SNADYVNICGCLKITNEGFFYLKKVPKLVV 370
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 124/304 (40%), Gaps = 65/304 (21%)
Query: 222 DSLSALGSLFYLNLNRCQLSDDGCEKFSKIGSLKVLNLGFNEITDECLVHLKGLTNLESL 281
DS+ L S+ LNL++ ++DD + S + SL + N ITD L LT + L
Sbjct: 58 DSIKYLQSVRCLNLSKSTINDDQLKYLSDVYSLNISNCK--SITDR---GLSFLTQVVKL 112
Query: 282 NLDSCG-IGDEGLVNLTGLTNLESINLSFTG-ISDGSLRKLAG-------------LSSL 326
N+ G I D GL N ++ INL F G I+D + L ++++
Sbjct: 113 NVSYNGNITDNGLKN---FQRIKKINLCFCGKITDKGIENLVYGKTLNSDEPIPTVINTI 169
Query: 327 KSLNLD-ARQITDTGLAALTSLTGLTHLDLFGARITDSGAAYLRNFKNLR--SLEICGGG 383
+ +NL +IT L L + L+G + + Y+ N + L+ L++
Sbjct: 170 RKINLQCCMRITSKCLQHLRRARSINM--LYGPQTYNEDLQYIPNIETLKIDGLDVSDKN 227
Query: 384 LTDAG---------------VKHIKDLSSLTLLNLSQNCNLTDKTL-------------- 414
LT+ + H+ L+ L L N+ ++ D
Sbjct: 228 LTNLKYVKYIFFGRNYPVIFMSHLDKLTKLILPNVPEHIEYIDFNKMPNLVKADLSGCIN 287
Query: 415 ---ELISGLTGLVSLNVSNSR-ITSAGLRHLKPLKNLRSLTLESC-KVTANDIKRLQSRD 469
E + GL+ + LN+ IT GL +L +K + + C ++T + +K L + D
Sbjct: 288 LLDEQLKGLSKVRKLNLKECYDITDVGLSYLTMVK---KINISYCFRITDSGLKYLSNAD 344
Query: 470 LPNL 473
N+
Sbjct: 345 YVNI 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,706,548
Number of Sequences: 539616
Number of extensions: 6343271
Number of successful extensions: 19677
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 499
Number of HSP's that attempted gapping in prelim test: 15659
Number of HSP's gapped (non-prelim): 2702
length of query: 479
length of database: 191,569,459
effective HSP length: 121
effective length of query: 358
effective length of database: 126,275,923
effective search space: 45206780434
effective search space used: 45206780434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)