Your job contains 1 sequence.
>011709
MDPQAPKKRGRKPKPKEDKKDEPKMKESTTTKRTAHQHAVDDKYTHWKSLVPVLYDWLAN
HNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIS
QFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVL
GATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK
SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDD
SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNG
VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA
GLFFQHAGHSPSSSIKFVLRESCLVDNNHGLSYANKKIKIYCHLEALKSFQIKKNFIFC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011709
(479 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 1767 4.2e-182 1
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 1290 1.5e-131 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 280 1.4e-44 2
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 280 1.4e-44 2
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 280 1.4e-44 2
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 280 1.4e-44 2
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 280 1.4e-44 2
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 280 1.4e-44 2
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 280 1.4e-44 2
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 280 3.8e-44 2
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 280 4.9e-44 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 280 6.2e-44 2
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 281 5.0e-43 2
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 274 7.5e-43 2
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 284 9.0e-43 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 280 1.1e-42 2
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 270 4.3e-42 2
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 280 5.0e-41 2
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 266 2.8e-40 2
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 255 2.9e-39 2
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 228 6.3e-36 2
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 295 1.1e-24 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 276 4.3e-22 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 275 6.9e-22 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 275 7.1e-22 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 274 7.7e-22 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 274 7.7e-22 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 274 7.9e-22 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 274 7.9e-22 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 274 9.3e-22 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 274 9.3e-22 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 274 9.3e-22 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 274 9.3e-22 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 274 9.3e-22 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 274 9.3e-22 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 274 9.3e-22 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 274 9.3e-22 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 273 1.3e-21 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 274 1.7e-21 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 274 1.7e-21 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 269 3.0e-21 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 199 3.7e-21 2
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 264 1.5e-20 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 258 7.9e-20 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 240 1.1e-19 1
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 194 1.1e-19 2
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 194 1.1e-19 2
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 183 1.8e-19 2
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 231 1.1e-18 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 200 6.7e-18 2
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 223 8.0e-18 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 233 8.7e-17 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 209 8.8e-17 2
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 158 2.0e-16 2
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 158 2.0e-16 2
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 229 3.0e-16 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 216 5.1e-15 1
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 181 8.9e-15 2
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 214 1.2e-14 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 214 1.2e-14 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 213 1.6e-14 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 213 1.6e-14 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 212 2.0e-14 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 211 2.1e-14 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 207 7.5e-14 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 194 6.2e-13 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 192 1.2e-12 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 191 1.5e-12 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 191 1.6e-12 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 189 2.8e-12 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 188 3.4e-12 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 188 3.4e-12 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 188 3.5e-12 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 175 1.5e-11 2
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 186 1.8e-11 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 180 2.9e-11 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 128 3.2e-11 2
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 164 4.5e-11 2
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 164 4.5e-11 2
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 146 2.0e-10 2
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 171 4.1e-10 1
GENEDB_PFALCIPARUM|PF13_0149 - symbol:PF13_0149 "chromati... 133 4.7e-10 2
UNIPROTKB|Q8IE52 - symbol:PF13_0149 "Chromatin assembly f... 133 4.7e-10 2
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 161 6.5e-10 3
ASPGD|ASPL0000074357 - symbol:AN4518 species:162425 "Emer... 177 8.9e-10 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 174 1.0e-09 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 167 1.1e-09 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 167 1.3e-09 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 173 1.3e-09 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 165 1.6e-09 1
UNIPROTKB|A8QB65 - symbol:Bm1_47965 "Ribosome biogenesis ... 168 1.6e-09 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 165 1.9e-09 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 159 1.9e-09 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 159 3.0e-09 2
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 168 3.3e-09 1
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 166 3.4e-09 1
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 166 3.4e-09 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 146 4.2e-09 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 150 4.3e-09 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 159 7.0e-09 1
WARNING: Descriptions of 479 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 1767 (627.1 bits), Expect = 4.2e-182, P = 4.2e-182
Identities = 332/398 (83%), Positives = 359/398 (90%)
Query: 32 KRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSE 91
K+T +VD+KY+ WK LVP+LYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSE
Sbjct: 56 KKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSE 115
Query: 92 QTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQ 151
QTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTIIHPGEVNRIRELPQ
Sbjct: 116 QTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQ 175
Query: 152 NTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYV 211
N+KIVATHTDSPDVLIWDVE QPNRHAVLGA NSRPDLILTGHQDNAEFALAMCPTEP+V
Sbjct: 176 NSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFV 235
Query: 212 LSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPR 271
LSGGKDKSVVLWSIQDHIT+ TD + SSGSIIKQ+ G+G DK + P+VGPR
Sbjct: 236 LSGGKDKSVVLWSIQDHITTIGTD------SKSSGSIIKQT---GEGTDKN-ESPTVGPR 285
Query: 272 GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDW 331
G+Y+GHEDTVEDV F P+SAQEFCSVGDDSCLILWDAR GT+PV KVEKAHDADLHCVDW
Sbjct: 286 GVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDW 345
Query: 332 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
NP DDNLILTGSADN+VR+FDRR LT+NGVGSPI KFEGH AAVLCVQWSPDKSSVFGSS
Sbjct: 346 NPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSS 405
Query: 392 AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 429
AEDGLLNIWDY++V KK ++ ++ PAGLFFQHAGH
Sbjct: 406 AEDGLLNIWDYDRVSKKSDRAAKS---PAGLFFQHAGH 440
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
Identities = 246/318 (77%), Positives = 277/318 (87%)
Query: 113 VAAAEHIS-QFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVE 171
+A E ++ Q NE+A SPFVKK+KTIIHPGEVNRIRELPQN+KIVATHTDSPD+LIW+ E
Sbjct: 116 IANCETVNRQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTE 175
Query: 172 AQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITS 231
QP+R+AVLGA +SRPDL+L GHQD+AEFALAMCPTEP+VLSGGKDKSV+LW+IQDHIT
Sbjct: 176 TQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHITM 235
Query: 232 SATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSA 291
+ +D +KS GSS KQ+ G+G+DK GPSVGPRGIYNGH+DTVEDV FCPSSA
Sbjct: 236 AGSD---SKSPGSS---FKQT---GEGSDKTG-GPSVGPRGIYNGHKDTVEDVAFCPSSA 285
Query: 292 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 351
QEFCSVGDDSCL+LWDAR GTSP +KVEKAHDADLHCVDWNP D+NLILTGSADN+VR+F
Sbjct: 286 QEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVF 345
Query: 352 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 411
DRRNLTSNGVGSP+ KFEGH AAVLCVQWSPDKSSVFGSSAEDGLLNIWD ++VGKK E
Sbjct: 346 DRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSE- 404
Query: 412 GPRTTNYPAGLFFQHAGH 429
R T P GLFFQHAGH
Sbjct: 405 --RATKTPDGLFFQHAGH 420
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 156/227 (68%), Positives = 180/227 (79%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN 99
VDD Y+ WK+L+P+LYD NH LVWPSLSCRWGPQLEQA K QRLYLSEQT+GSVPN
Sbjct: 54 VDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKT-QRLYLSEQTNGSVPN 112
Query: 100 TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATH 159
TLVIANCE V Q NE+A SPFVKK+KTIIHPGEVNRIRELPQN+KIVATH
Sbjct: 113 TLVIANCETVN---------RQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATH 163
Query: 160 TDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKS 219
TDSPD+LIW+ E QP+R+AVLGA +SRPDL+L GHQD+AEFALAMCPTEP+VLSGGKDKS
Sbjct: 164 TDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKS 223
Query: 220 VVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 266
V+LW+IQDHIT + +D +KS GSS KQ+ + D + GP
Sbjct: 224 VILWNIQDHITMAGSD---SKSPGSS---FKQTGEGSDKTGGPSVGP 264
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 280 (103.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 244 (91.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 67/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 107 (42.7 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 35/161 (21%), Positives = 67/161 (41%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIWDY-EKVGKKVEQGPRTTNYPAG 421
P++ V S +ED ++ +W E + ++ P + P G
Sbjct: 384 PNEPWVICSVSEDNIMQVWQMAENINN--DEDPEGSVDPEG 422
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 280 (103.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 244 (91.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 67/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 280 (103.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 244 (91.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 67/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 280 (103.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 244 (91.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 67/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 280 (103.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 244 (91.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 67/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 280 (103.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 244 (91.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 67/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 280 (103.6 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 244 (91.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 67/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 280 (103.6 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 240 (89.5 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 67/198 (33%), Positives = 99/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
+LS D ++ LW I
Sbjct: 190 SGNLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 280 (103.6 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 239 (89.2 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
Identities = 66/198 (33%), Positives = 100/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ +++++ WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
++LS D ++ LW I
Sbjct: 190 SGHLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 280 (103.6 bits), Expect = 6.2e-44, Sum P(2) = 6.2e-44
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 238 (88.8 bits), Expect = 6.2e-44, Sum P(2) = 6.2e-44
Identities = 67/198 (33%), Positives = 99/198 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
+LS D ++ LW I
Sbjct: 190 SGNLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 281 (104.0 bits), Expect = 5.0e-43, Sum P(2) = 5.0e-43
Identities = 63/173 (36%), Positives = 91/173 (52%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAH 322
+G V + I+ GH VEDV++ F SV DD L++WD R TS AH
Sbjct: 213 EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAH 272
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP 382
A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP
Sbjct: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSP 327
Query: 383 DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 328 HNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 231 (86.4 bits), Expect = 5.0e-43, Sum P(2) = 5.0e-43
Identities = 65/198 (32%), Positives = 98/198 (49%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T + DVL++D P++ G PDL L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECT--PDLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
+LS D ++ LW I
Sbjct: 190 SGCLLSASDDHTICLWDI 207
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 32/141 (22%), Positives = 65/141 (46%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP----VIKVEK---AHDADLHC 328
GH+ +++ P+ + S DD + LWD + T P ++ + H A +
Sbjct: 175 GHQKEGYGLSWNPNLSGCLLSASDDHTICLWD--ISTVPKEGKIVDAKTIFTGHTAVVED 232
Query: 329 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 388
V W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHAVDAHTAEVNCLSFNPYSEFIL 289
Query: 389 GSSAEDGLLNIWDYEKVGKKV 409
+ + D + +WD + K+
Sbjct: 290 ATGSADKTVALWDLRNLKLKL 310
Score = 106 (42.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 274 (101.5 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 62/173 (35%), Positives = 93/173 (53%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 378
Score = 236 (88.1 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 66/201 (32%), Positives = 97/201 (48%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTS 72
Query: 95 GSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKHKTIIHPGEVNR 145
N LVIA+ ++ P A S ++ E + F ++ I H GEVNR
Sbjct: 73 DE-QNHLVIASAQI--PNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNR 129
Query: 146 IRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMC 205
R +PQN I+AT T + DVL +D P++ G + PDL L GHQ + L+
Sbjct: 130 ARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSG--DCSPDLRLRGHQKEG-YGLSWN 186
Query: 206 PT-EPYVLSGGKDKSVVLWSI 225
P +LS D ++ LW I
Sbjct: 187 PNLSGNLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 33/140 (23%), Positives = 63/140 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA------HDADLHCV 329
GH+ +++ P+ + S DD + LWD G K+ A H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS-GAPKEGKIVDAKTIFTGHTAVVEDV 233
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P +
Sbjct: 234 SWHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 390 SSAEDGLLNIWDYEKVGKKV 409
+ + D + +WD + K+
Sbjct: 291 TGSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 284 (105.0 bits), Expect = 9.0e-43, Sum P(2) = 9.0e-43
Identities = 60/162 (37%), Positives = 91/162 (56%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
IYNGH VEDV + F SVGDD L++WD R GT P+ VE AH+++++C+ +N
Sbjct: 219 IYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVE-AHNSEVNCLSFN 277
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
P + L+ TGS D +V ++D RNL G+ ++ H+ V VQ+SP +V S
Sbjct: 278 PFCEFLVATGSTDKTVALWDMRNL-----GNRLHSLISHTDEVFQVQFSPHNETVLASCG 332
Query: 393 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
D +N+WD ++G++ + + P L F H GH+ S
Sbjct: 333 SDRRVNVWDLSRIGEE-QNNEDAADGPPELLFIHGGHTSKIS 373
Score = 221 (82.9 bits), Expect = 9.0e-43, Sum P(2) = 9.0e-43
Identities = 64/215 (29%), Positives = 99/215 (46%)
Query: 29 TTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQR 86
TT + ++++Y WK P LYD + H L WPSL+ W P K + ++
Sbjct: 2 TTQMEDVEEKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEK 61
Query: 87 LYLSEQTDGSVPNTLVIANCE--VVKPRVAAAEHISQFNEEARSPFVKKHKTII----HP 140
+ L T N L++A V + + + ++ E V + II H
Sbjct: 62 VILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHE 121
Query: 141 GEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEF 200
GEVNR R +PQN I+AT T S +V I+D P G + P+L LTGH+ +
Sbjct: 122 GEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCS--PNLKLTGHKKEG-Y 178
Query: 201 ALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSAT 234
++ P E ++LS D+S+ +W I S +T
Sbjct: 179 GISWNPRKEGHLLSCSDDQSICMWDISAASKSDST 213
Score = 94 (38.1 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 32/140 (22%), Positives = 59/140 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR-VGTSPVIKVEKAHDADLHC 328
P + H V ++F P + D + LWD R +G + +H ++
Sbjct: 260 PIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLI--SHTDEVFQ 317
Query: 329 VDWNPLDDNLILTGSADNSVRMFD------RRNLTSNGVGSPINKF--EGHSAAVLCVQW 380
V ++P ++ ++ + +D V ++D +N G P F GH++ + W
Sbjct: 318 VQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSW 377
Query: 381 SPDKSSVFGSSAEDGLLNIW 400
+P+ S AED +L IW
Sbjct: 378 NPNDPWSIASVAEDNILQIW 397
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 280 (103.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 226 (84.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 64/198 (32%), Positives = 98/198 (49%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTS 73
Query: 95 GSVPNTLVIANCEVVKP--RVAAAEHISQFNE----EARSPFVKKHKTIIHPGEVNRIRE 148
N LVIA+ ++ + A+ + S+ E + S ++ I H GEVNR R
Sbjct: 74 DE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARY 132
Query: 149 LPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT- 207
+PQN I+AT T + DVL++D P++ G N P+L L GHQ + L+ P
Sbjct: 133 MPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECN--PNLRLRGHQKEG-YGLSWNPNL 189
Query: 208 EPYVLSGGKDKSVVLWSI 225
+LS D ++ LW I
Sbjct: 190 SGNLLSASDDHTICLWDI 207
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSADKTVALWDLRNLKLKL 310
Score = 105 (42.0 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 384 PNEPWVICSVSEDNIMQVW 402
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 270 (100.1 bits), Expect = 4.3e-42, Sum P(2) = 4.3e-42
Identities = 63/174 (36%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G VG + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 213 EGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 271
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
+ A+++C+ +NP + ++ +GS D +V ++D RNL ++ FE H + VQWS
Sbjct: 272 YTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 326
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 378
Score = 234 (87.4 bits), Expect = 4.3e-42, Sum P(2) = 4.3e-42
Identities = 67/200 (33%), Positives = 100/200 (50%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTD 94
+ ++++Y WK+ P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 14 ERVINEEYKIWKN-TPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFGIHRLVLGTHTS 72
Query: 95 GSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKHKTIIHPGEVNRI 146
+ LVIA+ ++ P A S ++ E + S ++ I + GEVNR
Sbjct: 73 DEQNHHLVIASVQL--PNDDAQFDASYYDSEKGEFGGFGSVSGKIEIEIKINYEGEVNRA 130
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P++ G NS DL L GHQ + L+ P
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNS--DLHLRGHQKEG-YGLSWNP 187
Query: 207 -TEPYVLSGGKDKSVVLWSI 225
Y+LS D ++ LW I
Sbjct: 188 YLSGYLLSASDDHTICLWDI 207
Score = 118 (46.6 bits), Expect = 0.00055, P = 0.00055
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA----RVGTSPVIK-VEKAHDADLHCVD 330
GH+ +++ P + S DD + LWD + G K + H A + V
Sbjct: 175 GHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVS 234
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + ++A V C+ ++P+ + S
Sbjct: 235 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAYTAEVNCLSFNPNSEFILAS 291
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 292 GSPDKTVALWDLRNLKLKL 310
Score = 106 (42.4 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 281 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 340
V ++F P+S S D + LWD R + E +H ++ V W+P ++ ++
Sbjct: 276 VNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILA 334
Query: 341 TGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWSPDKSSVFGSSA 392
+ D + ++D + G P F GH+A + W+P++ V S +
Sbjct: 335 SSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Query: 393 EDGLLNIW 400
ED ++ +W
Sbjct: 395 EDNIMQVW 402
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 280 (103.6 bits), Expect = 5.0e-41, Sum P(2) = 5.0e-41
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TS-PVIKVEKA 321
+G V + I+ GH VEDV++ F SV DD L++WD R TS P V+ A
Sbjct: 178 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-A 236
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWS
Sbjct: 237 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWS 291
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G+ EQ P + P L F H GH+ S
Sbjct: 292 PHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPPELLFIHGGHTAKIS 343
Score = 198 (74.8 bits), Expect = 5.0e-41, Sum P(2) = 5.0e-41
Identities = 60/174 (34%), Positives = 87/174 (50%)
Query: 61 HNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKP--RVAAA 116
H L WPSL+ +W P + + K+ RL L T N LVIA+ ++ + A+
Sbjct: 3 HALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQLPNDDAQFDAS 61
Query: 117 EHISQFNE----EARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEA 172
+ S+ E + S ++ I H GEVNR R +PQN I+AT T S DVL++D
Sbjct: 62 HYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK 121
Query: 173 QPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSI 225
P++ G N PDL L GHQ + L+ P ++LS D ++ LW I
Sbjct: 122 HPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLWDI 172
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD--ARVGTSPVIKVEK---AHDADLHCVD 330
GH+ +++ P+ + S DD + LWD A V+ + H A + V
Sbjct: 140 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 199
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
W+ L ++L + + D + ++D R SN P + + H+A V C+ ++P + +
Sbjct: 200 WHLLHESLFGSVADDQKLMIWDTR---SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 256
Query: 391 SAEDGLLNIWDYEKVGKKV 409
+ D + +WD + K+
Sbjct: 257 GSADKTVALWDLRNLKLKL 275
Score = 105 (42.0 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + H V ++F P S + D + LWD R + E +H ++ V
Sbjct: 230 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 288
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 289 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 348
Query: 382 PDKSSVFGSSAEDGLLNIW 400
P++ V S +ED ++ +W
Sbjct: 349 PNEPWVICSVSEDNIMQVW 367
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 266 (98.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 61/181 (33%), Positives = 93/181 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + ++ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VL-CVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSS 433
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+
Sbjct: 319 IFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKI 377
Query: 434 S 434
S
Sbjct: 378 S 378
Score = 222 (83.2 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 64/200 (32%), Positives = 93/200 (46%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S VL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSI 225
++LS D +V LW I
Sbjct: 187 NLSGHLLSASDDHTVCLWDI 206
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 42/177 (23%), Positives = 75/177 (42%)
Query: 239 AKSAGSSGSIIKQSPK-PGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSV 297
A SSG ++ K P + P + RG H+ +++ + + S
Sbjct: 140 ATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRG----HQKEGYGLSWNSNLSGHLLSA 195
Query: 298 GDDSCLILWDARVGTSPVIKVE-KA----HDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
DD + LWD G V+ KA H A + V W+ L ++L + + D + M+D
Sbjct: 196 SDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWD 255
Query: 353 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 409
R SN P + + H+A V C+ ++P + + + D + +WD + K+
Sbjct: 256 TR---SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309
Score = 110 (43.8 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 35/156 (22%), Positives = 63/156 (40%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P + + H V ++F P S + D + LWD R + E D V
Sbjct: 264 PSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVV 323
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWS 381
W+P ++ ++ + D + ++D + G P F GH+A + W+
Sbjct: 324 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 417
P++ V S +ED ++ IW + E+ TT+
Sbjct: 384 PNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTS 419
Score = 62 (26.9 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 25/115 (21%), Positives = 49/115 (42%)
Query: 274 YNGHEDTVEDVT-FCPSSAQEFCSVGDDSCLILWD-ARVGTS---------P--VIKVEK 320
+ H+D + V + P + S G D L +WD +++G P ++ +
Sbjct: 312 FESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 371
Query: 321 AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI--NKFEGHSA 373
H A + WNP + +I + S DN ++++ N S + ++ EG +
Sbjct: 372 GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS 426
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 255 (94.8 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 66/201 (32%), Positives = 103/201 (51%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ W P E+ + K+ Q++ L T
Sbjct: 14 ERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTS 73
Query: 95 GSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKHKTIIHPGEVNR 145
S PN L++A ++ P Q++++ RS F V+ + I H GEVNR
Sbjct: 74 ESEPNYLMLAQVQL--PLDDTESEARQYDDD-RSEFGGFGCATGKVQIIQQINHDGEVNR 130
Query: 146 IRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMC 205
R +PQN I+AT T + +V ++D P++ + GA N PDL L GH + L+
Sbjct: 131 ARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACN--PDLKLRGHSSEG-YGLSWS 187
Query: 206 P-TEPYVLSGGKDKSVVLWSI 225
+ ++LSG D + LW I
Sbjct: 188 KFKQGHLLSGSDDAQICLWDI 208
Score = 226 (84.6 bits), Expect = 2.9e-39, Sum P(2) = 2.9e-39
Identities = 52/170 (30%), Positives = 87/170 (51%)
Query: 267 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--GTSPVIKVEKAHDA 324
S+ + I+ HE VEDV + F SVGDD L++WD R + PV V AH
Sbjct: 216 SLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVV-AHSM 274
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
+++C+ +NP ++ ++ TGS D +V++FD R L++ ++ F+ H V V W+P
Sbjct: 275 EVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLST-----ALHTFDSHKEEVFQVGWNPKN 329
Query: 385 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
++ S L +WD ++ ++ + + P L F H GH+ S
Sbjct: 330 ETILASCCLGRRLMVWDLSRIDEE-QTVEDAEDGPPELLFIHGGHTSKIS 378
Score = 93 (37.8 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 30/132 (22%), Positives = 54/132 (40%)
Query: 277 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 336
H V + F P + + D + L+D R S + +H ++ V WNP ++
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRK-LSTALHTFDSHKEEVFQVGWNPKNE 330
Query: 337 NLILTGSADNSVRMFDRRNLTSNGV------GSPINKF--EGHSAAVLCVQWSPDKSSVF 388
++ + + ++D + G P F GH++ + W+P + V
Sbjct: 331 TILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVI 390
Query: 389 GSSAEDGLLNIW 400
S AED +L IW
Sbjct: 391 SSVAEDNILQIW 402
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 228 (85.3 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 57/165 (34%), Positives = 80/165 (48%)
Query: 268 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI-KVEKAHDADL 326
+ P Y+ H D V DV F P SV DD L + D R+ KV +AH +
Sbjct: 225 ISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAI 284
Query: 327 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 386
+ V NP +D L+ T SAD +V ++D RN ++ EGH V ++WSP
Sbjct: 285 NAVAINPFNDYLLATASADKTVALWDLRNPYQR-----LHTLEGHEDEVYGLEWSPHDEP 339
Query: 387 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAG-LFFQHAGHS 430
+ SS+ D + IWD EK+G+ EQ P + L F H GH+
Sbjct: 340 ILASSSTDRRVCIWDLEKIGE--EQTPEDAEDGSPELLFMHGGHT 382
Score = 227 (85.0 bits), Expect = 6.3e-36, Sum P(2) = 6.3e-36
Identities = 67/206 (32%), Positives = 97/206 (47%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQ--ATYKNRQRLYLSEQTD 94
Q + ++Y WK VP LYD + H L WPSL+ +W P + T + QRL L T
Sbjct: 23 QKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTS 82
Query: 95 GSVPNTLVIANCEVVKPRVAAAEHISQFNEEAR---SPFVKKHKTIIHPGEVNRIRELPQ 151
G+ N L IA+ ++ E A+ S ++ + I H G+VNR R +PQ
Sbjct: 83 GNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSYTIEISQKIPHDGDVNRARYMPQ 142
Query: 152 NTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAE-FALAMCPTEPY 210
+I+AT + + I+D H L + P +L GH AE F L P P
Sbjct: 143 KPEIIATMGEGGNAYIFDTTC----HDALTTGEALPQAVLKGH--TAEGFGLCWNPNLPG 196
Query: 211 VLS-GGKDKSVVLWSIQDH-ITSSAT 234
L+ G +D+ + LW +Q TSS T
Sbjct: 197 NLATGAEDQVICLWDVQTQSFTSSET 222
Score = 134 (52.2 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 38/153 (24%), Positives = 68/153 (44%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
+ H + V P + + D + LWD R + +E H+ +++ ++W+
Sbjct: 276 VIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLE-GHEDEVYGLEWS 334
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKFE--GHSAAVLCVQWSPDK 384
P D+ ++ + S D V ++D + GSP F GH+ + W P++
Sbjct: 335 PHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNE 394
Query: 385 SSVFGSSAEDGLLNIWDYEKV--GKK-VEQGPR 414
V GS A+D +L IW +V G+ V+ PR
Sbjct: 395 RWVVGSLADDNILQIWSPSRVIWGRDHVQVSPR 427
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 295 (108.9 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 93/328 (28%), Positives = 152/328 (46%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQA----TYKNRQRLYLSEQTDG 95
V++ ++ WK P LYD L +H L WPSL+ W P +Y +L L T G
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 73
Query: 96 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKI 155
S + L++A +VV P A I N++ P V+ + I GEVNR R +PQ +
Sbjct: 74 SAQDFLMVA--DVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTL 131
Query: 156 VATHTDSPDVLIWDVEAQPNRHAVLGATNS-RPDLILTGHQDNAEFALAMCP-TEPYVLS 213
V T +V ++D +HA T+ PDL L GH D + L+ P E Y+LS
Sbjct: 132 VGAKTSGCEVFLFDYA----KHAAKSQTSECDPDLRLVGH-DKEGYGLSWSPFKEGYLLS 186
Query: 214 GGKDKSVVLWSI----QDHITSSATDPATAKSAGSSGSI-IKQSPKPG----DGNDKAAD 264
G +D+ + LW + QD + ++ +SA + S +K G DG D
Sbjct: 187 GSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWD 246
Query: 265 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
+ + HE V ++F P + + DS + L+D R +P + V +H+
Sbjct: 247 TRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAP-LHVMSSHEG 305
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFD 352
++ V+W+P + ++ + D + ++D
Sbjct: 306 EVFQVEWDPNHETVLASSGEDRRLMVWD 333
Score = 245 (91.3 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 51/163 (31%), Positives = 87/163 (53%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
+Y GHE + DV++ + F S G+D L++WD R T+ + K H+ +++ + +N
Sbjct: 212 VYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTR--TNQMQHQVKVHEREVNYLSFN 269
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
P ++ ++ T S+D++V +FD R L + P++ H V V+W P+ +V SS
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNA-----PLHVMSSHEGEVFQVEWDPNHETVLASSG 324
Query: 393 EDGLLNIWDYEKVGKK-VEQGPRTTNYPAGLFFQHAGHSPSSS 434
ED L +WD +VG++ +E + P L F H GH S
Sbjct: 325 EDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKIS 367
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
HD + + + W+P + +L+GS D + ++D + V + + +EGH +A+ V W
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 382 PDKSSVFGSSAEDGLLNIWDYE--KVGKKVEQGPRTTNY 418
++FGS+ EDG L IWD ++ +V+ R NY
Sbjct: 227 MKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNY 265
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 32/134 (23%), Positives = 60/134 (44%)
Query: 277 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 336
HE V ++F P + + DS + L+D R +P + V +H+ ++ V+W+P +
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAP-LHVMSSHEGEVFQVEWDPNHE 317
Query: 337 NLILTGSADNSVRMFDRRNLTSNGV--------GSPINKFE--GHSAAVLCVQWSPDKSS 386
++ + D + ++D + + G P F GH A + W+ ++
Sbjct: 318 TVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPW 377
Query: 387 VFGSSAEDGLLNIW 400
V S AED L +W
Sbjct: 378 VIASVAEDNSLQVW 391
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 276 (102.2 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 62/178 (34%), Positives = 92/178 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 316
D N A + R I+ GHE VEDV + F SVGDD L++WD R P
Sbjct: 201 DINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNV-PGH 259
Query: 317 KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVL 376
++ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H +
Sbjct: 260 AID-AHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLK-----LHSFESHRDEIF 313
Query: 377 CVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
VQWSP ++ SS D L++WD K+G+ + + P L F H GH+ S
Sbjct: 314 QVQWSPHNETILASSGTDKRLHVWDLSKIGED-QTAEDAEDGPPELLFIHGGHTAKIS 370
Score = 251 (93.4 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 93/346 (26%), Positives = 146/346 (42%)
Query: 28 STTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QR 86
+T T+ +D+Y WK P LYD + H L WPSLS +W P++E+ + + R
Sbjct: 2 ATIEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKESSDHTVHR 61
Query: 87 LYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKHKTI 137
L L T N L+I+ ++ P A S+++ E R F V+ I
Sbjct: 62 LILGTHTSDE-QNHLLIS--KICMPTDEAQFDASRYDTE-RGEFGGFGAVNGKVEPDIRI 117
Query: 138 IHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDN 197
H GEVNR R +PQ I+AT + S DV I+D P+ V P L L GH
Sbjct: 118 NHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPS---VPKDNTFNPLLKLKGHTKE 174
Query: 198 AEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI------IK 250
+ L+ P E +LS D++V W I + ++ A G + +
Sbjct: 175 G-YGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVL 233
Query: 251 QSPKPGD-GNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
G G+DK D + P + H V + F P S + D + LW
Sbjct: 234 HDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALW 293
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D R + E +H ++ V W+P ++ ++ + D + ++D
Sbjct: 294 DLRNLRLKLHSFE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 275 (101.9 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 60/173 (34%), Positives = 91/173 (52%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKA 321
+G V + I+ GH VEDV + F SV DD L++WD R T+ P V+ A
Sbjct: 211 EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-A 269
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + V WS
Sbjct: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWS 324
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 325 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 376
Score = 263 (97.6 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 91/339 (26%), Positives = 147/339 (43%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + + ++Y WK P LYD + H L WPSL+ +W P + + K+ +L T
Sbjct: 10 TVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KHKTII---HPGEVNRIR 147
S N LV+A ++ + +++ S+ E V K +T I H GEVNR R
Sbjct: 70 HTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRAR 129
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT 207
+PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+
Sbjct: 130 YMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNSN 186
Query: 208 -EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDGN 259
+ ++LS D +V LW I A A G S + + +S +
Sbjct: 187 LKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 246
Query: 260 DK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS 313
D+ + P + H V ++F P S + D + LWD R
Sbjct: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 306
Query: 314 PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ E +H ++ V W+P ++ ++ + D + ++D
Sbjct: 307 KLHSFE-SHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 275 (101.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 60/173 (34%), Positives = 91/173 (52%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKA 321
+G V + I+ GH VEDV + F SV DD L++WD R T+ P V+ A
Sbjct: 212 EGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-A 270
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + V WS
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWS 325
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 258 (95.9 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 91/340 (26%), Positives = 147/340 (43%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P + + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKP--RVAAAEHISQFNEEARSPFVK-KHKTII---HPGEVNRI 146
S N LV+A ++ + A+ + S+ E V K +T I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P++ G + PDL L GHQ + L+
Sbjct: 130 RYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSG--DCSPDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ E +H ++ V W+P ++ ++ + D + ++D
Sbjct: 307 LKLHSFE-SHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 274 (101.5 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 196 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 255
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 256 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 309
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 310 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 368
Score = 274 (101.5 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 90/334 (26%), Positives = 143/334 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQN 152
S N LV+A + P A S + E + K I H GEVNR R +PQN
Sbjct: 70 HTSDEQNHLVVARVHI--PNDDAQFDASHCDSEKGGKIECEIK-INHEGEVNRARYMPQN 126
Query: 153 TKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT-EPYV 211
I+AT T S DVL++D P + G N PDL L GHQ + L+ ++
Sbjct: 127 PHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNSNLSGHL 183
Query: 212 LSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDGNDK--- 261
LS D +V LW I A A G S + + +S +D+
Sbjct: 184 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 243
Query: 262 ---AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV 318
+ P + + H V ++F P S + D + LWD R +
Sbjct: 244 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NLKLKLHT 302
Query: 319 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
++H ++ V W+P ++ ++ + D + ++D
Sbjct: 303 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 336
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 274 (101.5 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 196 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 255
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 256 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 309
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 310 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 368
Score = 271 (100.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 89/334 (26%), Positives = 143/334 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQN 152
S N LV+A + P A S + + + K I H GEVNR R +PQN
Sbjct: 70 HTSDEQNHLVVARVHI--PNDDAQFDASHCDSDKGGKIECEIK-INHEGEVNRARYMPQN 126
Query: 153 TKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT-EPYV 211
I+AT T S DVL++D P + G N PDL L GHQ + L+ ++
Sbjct: 127 PHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNSNLSGHL 183
Query: 212 LSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDGNDK--- 261
LS D +V LW I A A G S + + +S +D+
Sbjct: 184 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 243
Query: 262 ---AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV 318
+ P + + H V ++F P S + D + LWD R +
Sbjct: 244 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NLKLKLHT 302
Query: 319 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
++H ++ V W+P ++ ++ + D + ++D
Sbjct: 303 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 336
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 274 (101.5 bits), Expect = 7.9e-22, P = 7.9e-22
Identities = 58/164 (35%), Positives = 89/164 (54%)
Query: 271 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 330
+ ++ GHE VEDV + F SVGDD L++WD R T P ++ AH A+++C+
Sbjct: 215 KDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTST-PGHCID-AHSAEVNCLA 272
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
+NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ S
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMK-----LHSFESHRDEIFQVQWSPHNETILAS 327
Query: 391 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
S D L++WD K+G+ + + P L F H GH+ S
Sbjct: 328 SGTDKRLHVWDLSKIGED-QSAEDAEDGPPELLFIHGGHTAKIS 370
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 90/347 (25%), Positives = 146/347 (42%)
Query: 28 STTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QR 86
+T T+ +D+Y WK P LYD + H L WPSLS +W P + + + R
Sbjct: 2 ATLEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHR 61
Query: 87 LYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKHKTI 137
L L T N L+I+ ++ P A S+++ E RS + V+ I
Sbjct: 62 LILGTHTSDE-QNHLLIS--KICMPTDDAQFDASRYDTE-RSEYGGFGAVNGKVEPDIRI 117
Query: 138 IHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLI-LTGHQD 196
H GEVNR R +PQ + I+AT + DV I+D +H+ + N+ LI L GH
Sbjct: 118 NHEGEVNRARYMPQKSNIIATKSPHADVYIFDYL----KHSAVPRDNTFNPLIRLKGHTK 173
Query: 197 NAEFALAMCPT-EPYVLSGGKDKSVVLWSIQ--DHITSSATDPATAKSAGS-----SGSI 248
+ L+ P E +LS D++V W I ++ K S + +
Sbjct: 174 EG-YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHV 232
Query: 249 IKQSPKPGDGNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
+ G+DK D + P + H V + F P S + D + L
Sbjct: 233 LHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVAL 292
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
WD R + E +H ++ V W+P ++ ++ + D + ++D
Sbjct: 293 WDLRNLRMKLHSFE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 274 (101.5 bits), Expect = 7.9e-22, P = 7.9e-22
Identities = 58/164 (35%), Positives = 89/164 (54%)
Query: 271 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 330
+ ++ GHE VEDV + F SVGDD L++WD R T P ++ AH A+++C+
Sbjct: 215 KDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTST-PGHCID-AHSAEVNCLA 272
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
+NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP ++ S
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMK-----LHSFESHRDEIFQVQWSPHNETILAS 327
Query: 391 SAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
S D L++WD K+G+ + + P L F H GH+ S
Sbjct: 328 SGTDKRLHVWDLSKIGED-QSAEDAEDGPPELLFIHGGHTAKIS 370
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 90/347 (25%), Positives = 146/347 (42%)
Query: 28 STTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QR 86
+T T+ +D+Y WK P LYD + H L WPSLS +W P + + + R
Sbjct: 2 ATLEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHR 61
Query: 87 LYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKHKTI 137
L L T N L+I+ ++ P A S+++ E RS + V+ I
Sbjct: 62 LILGTHTSDE-QNHLLIS--KICMPTDDAQFDASRYDTE-RSEYGGFGAVNGKVEPDIRI 117
Query: 138 IHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLI-LTGHQD 196
H GEVNR R +PQ + I+AT + DV I+D +H+ + N+ LI L GH
Sbjct: 118 NHEGEVNRARYMPQKSNIIATKSPHADVYIFDYL----KHSAVPRDNTFNPLIRLKGHTK 173
Query: 197 NAEFALAMCPT-EPYVLSGGKDKSVVLWSIQ--DHITSSATDPATAKSAGS-----SGSI 248
+ L+ P E +LS D++V W I ++ K S + +
Sbjct: 174 EG-YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHV 232
Query: 249 IKQSPKPGDGNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
+ G+DK D + P + H V + F P S + D + L
Sbjct: 233 LHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVAL 292
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
WD R + E +H ++ V W+P ++ ++ + D + ++D
Sbjct: 293 WDLRNLRMKLHSFE-SHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 88/340 (25%), Positives = 143/340 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NL 305
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 88/340 (25%), Positives = 143/340 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NL 305
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 88/340 (25%), Positives = 143/340 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NL 305
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 88/340 (25%), Positives = 143/340 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NL 305
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 88/340 (25%), Positives = 143/340 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NL 305
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 59/173 (34%), Positives = 91/173 (52%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--PVIKVEKA 321
+G V + ++ GH VEDV + F SV DD L++WD R T+ P V+ A
Sbjct: 212 EGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-A 270
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + V WS
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWS 325
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
P ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 92/340 (27%), Positives = 147/340 (43%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P + + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKP--RVAAAEHISQFNEEARSPFVK-KHKTII---HPGEVNRI 146
S N LV+A +V + A+ + S+ E V K +T I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P++ G + PDL L GHQ + L+
Sbjct: 130 RYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECS--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ E +H ++ V W+P ++ ++ + D + ++D
Sbjct: 307 LKLHSFE-SHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 88/340 (25%), Positives = 143/340 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NL 305
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 274 (101.5 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 265 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 318
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 377
Score = 260 (96.6 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 88/340 (25%), Positives = 143/340 (42%)
Query: 34 TAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQT 93
T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +L T
Sbjct: 10 TVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGT 69
Query: 94 DGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPGEVNRI 146
S N LV+A + A H E + + ++ I H GEVNR
Sbjct: 70 HTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
Query: 147 RELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP 206
R +PQN I+AT T S DVL++D P + G N PDL L GHQ + L+
Sbjct: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YGLSWNS 186
Query: 207 T-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSPKPGDG 258
++LS D +V LW I A A G S + + +S
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
Query: 259 NDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
+D+ + P + + H V ++F P S + D + LWD R
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR-NL 305
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 273 (101.2 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 90/341 (26%), Positives = 153/341 (44%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTD 94
+ ++++Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 18 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTS 77
Query: 95 GSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKHKTIIHPGEVNR 145
N L+IA+ ++ P A S ++ E + F ++ I H GEVNR
Sbjct: 78 DE-QNHLLIASVQL--PSEDAQFDGSHYDNE-KGEFGGFGSVCGKIEIEIKINHEGEVNR 133
Query: 146 IRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMC 205
R +PQN ++AT T S DVL++D P++ G +PDL L GHQ + L+
Sbjct: 134 ARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSG--ECQPDLRLRGHQKEG-YGLSWN 190
Query: 206 PT-EPYVLSGGKDKSVVLWSI----QDHITSSATDPATAKSA---GSSGSIIKQSPKPGD 257
P Y+LS D ++ LW I ++H A + T +A + ++ +S
Sbjct: 191 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250
Query: 258 GNDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG 311
+D+ + + P + H V ++F P S + D + LWD R
Sbjct: 251 ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310
Query: 312 TSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ E +H ++ V W+P ++ ++ + D + ++D
Sbjct: 311 KLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350
Score = 262 (97.3 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 57/168 (33%), Positives = 87/168 (51%)
Query: 268 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG-TSPVIKVEKAHDADL 326
+ + I+ GH VEDV + F SV DD L++WD R TS AH A++
Sbjct: 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280
Query: 327 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 386
+C+ +NP + ++ TGSAD +V ++D RNL ++ FE H + VQWSP +
Sbjct: 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNET 335
Query: 387 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ SS D L++WD K+G++ + + P L F H GH+ S
Sbjct: 336 ILASSGTDRRLHVWDLSKIGEE-QSTEDAEDGPPELLFIHGGHTAKIS 382
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 274 (101.5 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 249 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 308
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 309 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 362
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 363 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 421
Score = 262 (97.3 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 89/345 (25%), Positives = 145/345 (42%)
Query: 29 TTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY 88
T + T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +
Sbjct: 49 TVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 108
Query: 89 LSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPG 141
L T S N LV+A + A H E + + ++ I H G
Sbjct: 109 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEG 168
Query: 142 EVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFA 201
EVNR R +PQN I+AT T S DVL++D P + G N PDL L GHQ +
Sbjct: 169 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YG 225
Query: 202 LAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSP 253
L+ ++LS D +V LW I A A G S + + +S
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 285
Query: 254 KPGDGNDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
+D+ + P + + H V ++F P S + D + LWD
Sbjct: 286 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 345
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
R + ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 346 LR-NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 274 (101.5 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS--P 314
D N +G V + I+ GH VEDV + F SV DD L++WD R T+ P
Sbjct: 249 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 308
Query: 315 VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL ++ FE H
Sbjct: 309 SHLVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDE 362
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ V WSP ++ SS D LN+WD K+G++ + + P L F H GH+ S
Sbjct: 363 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE-QSAEDAEDGPPELLFIHGGHTAKIS 421
Score = 262 (97.3 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 89/345 (25%), Positives = 145/345 (42%)
Query: 29 TTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY 88
T + T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +
Sbjct: 49 TVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 108
Query: 89 LSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPG 141
L T S N LV+A + A H E + + ++ I H G
Sbjct: 109 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEG 168
Query: 142 EVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFA 201
EVNR R +PQN I+AT T S DVL++D P + G N PDL L GHQ +
Sbjct: 169 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YG 225
Query: 202 LAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI-------IKQSP 253
L+ ++LS D +V LW I A A G S + + +S
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 285
Query: 254 KPGDGNDK------AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
+D+ + P + + H V ++F P S + D + LWD
Sbjct: 286 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 345
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
R + ++H ++ V W+P ++ ++ + D + ++D
Sbjct: 346 LR-NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 269 (99.8 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 105/406 (25%), Positives = 174/406 (42%)
Query: 27 ESTTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQA--TYKNR 84
E+ + + T+ +H + WK VP LYD + + WPSLS +W P + + + +
Sbjct: 3 EAESCEETSKEHRI------WKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSM 56
Query: 85 QRLYLSEQTDGSVPNTLVIANCEVVK--PRVAAA------EHISQFNEEARSPFVKKHKT 136
R+ T G V N L+I+ + P A E + E + + + + K
Sbjct: 57 HRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIK- 115
Query: 137 IIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQD 196
I HPGEV+R R +P N I+A+ S DV I+D P+ T RP L L GH+
Sbjct: 116 INHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPK---DTKFRPQLRLKGHEG 172
Query: 197 NAEFALAMCPT-EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKP 255
+ ++ T E ++L+ G D + W I + T S +K G S + S
Sbjct: 173 EG-YGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHA 231
Query: 256 ------GD-GNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
G G+D+ D P+ GH V +TF P S + D + L
Sbjct: 232 LHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVAL 291
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL---TSNGVG 362
WD R + + K H+ ++ V ++P + ++ + +D+ V ++D + +S+
Sbjct: 292 WDMRNMRKKMYTL-KHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAA 350
Query: 363 S----P---INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
S P I GH+ V W+P++ SS E L +W+
Sbjct: 351 SSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWE 396
Score = 216 (81.1 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 49/162 (30%), Positives = 79/162 (48%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P+ + GH EDV+F F SVGDD L LWD R + V H A+++C+
Sbjct: 213 PQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAV--GHTAEVNCI 270
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
+NP + ++ TGS D +V ++D RN+ + + H+ + V +SP +V
Sbjct: 271 TFNPFSEYILATGSVDKTVALWDMRNMRKK-----MYTLKHHNDEIFQVSFSPHYETVLA 325
Query: 390 SSAEDGLLNIWDYEKVGKKVEQGPRTTN-YPAGLFFQHAGHS 430
SS D + +WD K+ +++ P + F HAGH+
Sbjct: 326 SSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHT 367
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 199 (75.1 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 40/128 (31%), Positives = 68/128 (53%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
+ GH +VED+ + P+ F S D + +WD R+G SP + KAH+AD++ + WN
Sbjct: 265 FAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSF-KAHNADVNVISWNR 323
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
L ++ +GS D + + D R + G + + FE H + ++WS ++S ++
Sbjct: 324 LASCMLASGSDDGTFSIRDLRLI--KGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSG 381
Query: 394 DGLLNIWD 401
D L IWD
Sbjct: 382 DNQLTIWD 389
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 228 HITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFC 287
HI S D + S + + +G D + + P ++GH+D + +
Sbjct: 173 HICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWS 232
Query: 288 PSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKA-HDADLHCVDWNPLDDNLILTGSAD 345
P++A S GD +I LW+ G+ V + A H A + + W+P ++N+ + S D
Sbjct: 233 PATAGRLLS-GDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVD 291
Query: 346 NSVRMFDRRNLTSNGVG-SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
SV ++D R +G SP F+ H+A V + W+ S + S ++DG +I D
Sbjct: 292 GSVAVWDIR------LGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRD 342
Score = 146 (56.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 44/175 (25%), Positives = 79/175 (45%)
Query: 252 SPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD---- 307
S D D+A+ P++ R + H V + P ++ S D + +WD
Sbjct: 135 SDSDDDDGDEASKTPNIQVRRV--AHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSH 192
Query: 308 ----------ARVGTSPVIKVE-----KAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
+ GTSPV+ H + + +DW+P +L+G + + +++
Sbjct: 193 LNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWE 252
Query: 353 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 407
+ + PI F GH+A+V +QWSP + +VF S + DG + +WD ++GK
Sbjct: 253 PAS--GSWAVDPI-PFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI-RLGK 303
Score = 121 (47.7 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 123 NEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVL-- 180
+E +++P ++ + + H G VNRIR +PQN+ I + DS V +WD+ + N A
Sbjct: 143 DEASKTPNIQVRR-VAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESET 201
Query: 181 ----GAT---NSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVV-LWSIQDHITSS 232
G + N P + +GH+D +A+ P L G KS++ LW + S
Sbjct: 202 EGKDGTSPVLNQAPLVNFSGHKDEG-YAIDWSPATAGRLLSGDCKSMIHLW--EPASGSW 258
Query: 233 ATDPATAKSAGSSGSIIKQSPKPGDGN 259
A DP AG + S+ P + N
Sbjct: 259 AVDPIPF--AGHTASVEDLQWSPAEEN 283
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 264 (98.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 83/327 (25%), Positives = 143/327 (43%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQL----EQATYKNRQRLYLSEQTDG 95
V+++++ WK P LYD + +H L WPSL+ W P + Y +L L T G
Sbjct: 15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 74
Query: 96 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKI 155
+ L++A +VV P A + ++E P V+ + I GEVNR R +PQ +
Sbjct: 75 GAQDFLMVA--DVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKPTL 132
Query: 156 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP-TEPYVLSG 214
V T +V ++D + + PDL L GH+ + LA E Y+LSG
Sbjct: 133 VGAKTSGSEVFLFDYARLSGKPQT---SECDPDLRLMGHEQEG-YGLAWSSFKEGYLLSG 188
Query: 215 GKDKSVVLWSIQDHITSSATDPATAKSAGSS--GSI---IKQSPKPGDGNDKAA----DG 265
+D+ + LW + T +P S + +K G D D
Sbjct: 189 SQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDL 248
Query: 266 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD 325
+ + HE + ++F P + + DS + L+D R T+P+ + K H+ +
Sbjct: 249 RTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSK-HEGE 307
Query: 326 LHCVDWNPLDDNLILTGSADNSVRMFD 352
+ V+W+P + ++ + D + ++D
Sbjct: 308 VFQVEWDPNHETVLASSGEDRRLMVWD 334
Score = 257 (95.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 54/168 (32%), Positives = 90/168 (53%)
Query: 268 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 327
+ P +Y GH+ +EDV + + F S GDD L++WD R T+ + K H+ +++
Sbjct: 208 LNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR--TNQMQHQVKVHEREIN 265
Query: 328 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 387
+ +NP ++ ++ T S+D++V +FD R LT+ P++ H V V+W P+ +V
Sbjct: 266 YLSFNPFNEWVLATASSDSTVALFDLRKLTA-----PLHVLSKHEGEVFQVEWDPNHETV 320
Query: 388 FGSSAEDGLLNIWDYEKVG-KKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
SS ED L +WD +VG +++E + P L F H GH S
Sbjct: 321 LASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKIS 368
Score = 126 (49.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 26/99 (26%), Positives = 53/99 (53%)
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H+ + + + W+ + +L+GS D + ++D ++ V +P++ +EGH + + V W
Sbjct: 168 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWH 227
Query: 382 PDKSSVFGSSAEDGLLNIWDYE--KVGKKVEQGPRTTNY 418
++FGS+ +D L IWD ++ +V+ R NY
Sbjct: 228 MKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINY 266
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 277 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 336
HE + ++F P + + DS + L+D R T+P+ + K H+ ++ V+W+P +
Sbjct: 260 HEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSK-HEGEVFQVEWDPNHE 318
Query: 337 NLILTGSADNSVRMFDRRNLTSNGV--------GSPINKFE--GHSAAVLCVQWSPDKSS 386
++ + D + ++D + + G P F GH A + W+ D+
Sbjct: 319 TVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPW 378
Query: 387 VFGSSAEDGLLNIW 400
V S AED L +W
Sbjct: 379 VISSVAEDNSLQVW 392
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 258 (95.9 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 98/378 (25%), Positives = 169/378 (44%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN 99
+ ++Y+HWK +LYD+L ++ WPSL+C++ P L+ T + R+ LS T P
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLD--TTSDEHRILLSSFTSSQKPE 76
Query: 100 --TLVIANCEVVKP-RVAAAEHIS----QFNEEARSPFVKKHK----TIIHP-GEVNRIR 147
T+ I+ + + ++ + +F E + F KH +I P GE NR R
Sbjct: 77 DETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNRAR 136
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRP-DLILTGHQDNAEFALAMCP 206
LPQN I+A + + I+D + + + S P + L G + AM
Sbjct: 137 YLPQNPDIIAGASSDGAIYIFD-RTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMDT 195
Query: 207 TEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 266
+ + + + + W++Q A S+ S+G + K + D P
Sbjct: 196 SSADI----NEATSLAWNLQQE--------ALLLSSHSNGQVQVWDIKQYSHENPIIDLP 243
Query: 267 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL 326
V N V DVT+ P+ F + + + + L D R + + HD +
Sbjct: 244 LVS----INSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGV 299
Query: 327 HCVDWNPLDDNLILTGSADNSVRM--FDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
+ +N ++LIL SAD++ R+ +D RN+ SPI E H +V ++WSP+
Sbjct: 300 NSCRFN-YKNSLILA-SADSNGRLNLWDIRNMNK----SPIATME-HGTSVSTLEWSPNF 352
Query: 385 SSVFGSSA-EDGLLNIWD 401
+V ++ EDGL+ +WD
Sbjct: 353 DTVLATAGQEDGLVKLWD 370
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 54/141 (38%), Positives = 78/141 (55%)
Query: 297 VGDDSCLILWDARVG-TS-PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
V DD L++WD R TS P V+ AH A+++C+ +NP + ++ TGSAD +V ++D R
Sbjct: 1 VADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 59
Query: 355 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPR 414
NL ++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P
Sbjct: 60 NLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPE 112
Query: 415 TT-NYPAGLFFQHAGHSPSSS 434
+ P L F H GH+ S
Sbjct: 113 DAEDGPPELLFIHGGHTAKIS 133
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 194 (73.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 45/158 (28%), Positives = 82/158 (51%)
Query: 278 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDWNPLDD 336
+D V DV + + F SV +DS + L+DAR + V+ A ++ ++ + ++P +
Sbjct: 186 KDIVNDVKWHQFNGNLFASVSEDSHVYLFDAR--DNKVVSQYYAESSNGINSLAFSPFAE 243
Query: 337 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 396
NL+ G+ +++ + D R L N ++ GHS + C+++SP + + ++D
Sbjct: 244 NLVAIGNTSSNINLLDLRKLGENS--GLLHTMMGHSEGITCMEFSPHHDGILATGSQDRR 301
Query: 397 LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ IWD KVG++ +Q P LF HAGH+ S
Sbjct: 302 IIIWDLFKVGEEQQQEDAEDGCPE-LFMMHAGHTAGVS 338
Score = 127 (49.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDAR-VG-TSPVIKVEKAHDADLHCVD 330
Y + + + F P A+ ++G+ S I L D R +G S ++ H + C++
Sbjct: 226 YAESSNGINSLAFSPF-AENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 331 WNPLDDNLILTGSADNSVRMFD--------RRNLTSNGVGSPINKFEGHSAAVLCVQWSP 382
++P D ++ TGS D + ++D ++ +G GH+A V + W P
Sbjct: 285 FSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
Query: 383 DKSSVFGSSAEDGLLNIWDYEK 404
K + GS A+D ++++W+ K
Sbjct: 345 FKDWMIGSVADDNIVHLWEISK 366
Score = 108 (43.1 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 31/135 (22%), Positives = 66/135 (48%)
Query: 39 AVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP 98
++ ++Y W+ +Y++++ L+WPSL+ +W P +L L T
Sbjct: 10 SIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDAKLLLGTHTSNQSA 69
Query: 99 NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVAT 158
N L +A+ ++ +A+ N +A S +K + + + E+ R R +PQ+ IVAT
Sbjct: 70 NQLKVASTQL------SADP----NVKANSK-IKTVQKLENNAEICRARYMPQDANIVAT 118
Query: 159 HTDSPDVLIWDVEAQ 173
+V +++++ +
Sbjct: 119 INGLGEVDLYNLDTE 133
Score = 72 (30.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H + + + WNP L++TG+ DN V + D T+N K + V V+W
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDT---TTN---KTTFKSDIQKDIVNDVKWH 195
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 411
++F S +ED + ++D + K V Q
Sbjct: 196 QFNGNLFASVSEDSHVYLFD-ARDNKVVSQ 224
Score = 63 (27.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
++ GH V D+++CP SV DD+ + LW+
Sbjct: 329 MHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWE 363
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 194 (73.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 45/158 (28%), Positives = 82/158 (51%)
Query: 278 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD-LHCVDWNPLDD 336
+D V DV + + F SV +DS + L+DAR + V+ A ++ ++ + ++P +
Sbjct: 186 KDIVNDVKWHQFNGNLFASVSEDSHVYLFDAR--DNKVVSQYYAESSNGINSLAFSPFAE 243
Query: 337 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 396
NL+ G+ +++ + D R L N ++ GHS + C+++SP + + ++D
Sbjct: 244 NLVAIGNTSSNINLLDLRKLGENS--GLLHTMMGHSEGITCMEFSPHHDGILATGSQDRR 301
Query: 397 LNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSS 434
+ IWD KVG++ +Q P LF HAGH+ S
Sbjct: 302 IIIWDLFKVGEEQQQEDAEDGCPE-LFMMHAGHTAGVS 338
Score = 127 (49.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDAR-VG-TSPVIKVEKAHDADLHCVD 330
Y + + + F P A+ ++G+ S I L D R +G S ++ H + C++
Sbjct: 226 YAESSNGINSLAFSPF-AENLVAIGNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCME 284
Query: 331 WNPLDDNLILTGSADNSVRMFD--------RRNLTSNGVGSPINKFEGHSAAVLCVQWSP 382
++P D ++ TGS D + ++D ++ +G GH+A V + W P
Sbjct: 285 FSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
Query: 383 DKSSVFGSSAEDGLLNIWDYEK 404
K + GS A+D ++++W+ K
Sbjct: 345 FKDWMIGSVADDNIVHLWEISK 366
Score = 108 (43.1 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 31/135 (22%), Positives = 66/135 (48%)
Query: 39 AVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP 98
++ ++Y W+ +Y++++ L+WPSL+ +W P +L L T
Sbjct: 10 SIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDAKLLLGTHTSNQSA 69
Query: 99 NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVAT 158
N L +A+ ++ +A+ N +A S +K + + + E+ R R +PQ+ IVAT
Sbjct: 70 NQLKVASTQL------SADP----NVKANSK-IKTVQKLENNAEICRARYMPQDANIVAT 118
Query: 159 HTDSPDVLIWDVEAQ 173
+V +++++ +
Sbjct: 119 INGLGEVDLYNLDTE 133
Score = 72 (30.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H + + + WNP L++TG+ DN V + D T+N K + V V+W
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDT---TTN---KTTFKSDIQKDIVNDVKWH 195
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 411
++F S +ED + ++D + K V Q
Sbjct: 196 QFNGNLFASVSEDSHVYLFD-ARDNKVVSQ 224
Score = 63 (27.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
++ GH V D+++CP SV DD+ + LW+
Sbjct: 329 MHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWE 363
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 183 (69.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 46/159 (28%), Positives = 72/159 (45%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR---VGTSPVIKVEKAHDADLHCVDW 331
+ HE V DV F SV D L + D R T P V AH +H V +
Sbjct: 231 SSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVH-AHSGPIHSVAF 289
Query: 332 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
NP +D ++ T S D ++ ++D RNL ++ EGH V + +SP + + S+
Sbjct: 290 NPHNDFILATCSTDKTIALWDLRNLNQR-----LHTLEGHEDIVTKISFSPHEEPILAST 344
Query: 392 AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHS 430
+ D +WD ++G+ + + P L F H GH+
Sbjct: 345 SADRRTLVWDLSRIGED-QPAEEAQDGPPELLFMHGGHT 382
Score = 121 (47.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 44/203 (21%), Positives = 87/203 (42%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE---QATYKNRQRLYLSEQT 93
+ ++++Y WK P LYD + L WP +S +W P+ + + Y Q+++L +
Sbjct: 23 EKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGY-TEQKMFLGVRA 81
Query: 94 DGSVPNTLVIANCEV--VKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQ 151
D L +A+ ++ + V + S V HP V + +PQ
Sbjct: 82 DVG-KYLLAVASIQLPYLNQTVPPTTMEGASAGDESSLRVNISNLYSHPESVCSAKLMPQ 140
Query: 152 NTKIVATHTD-SPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPY 210
+ VAT + DVL++D E+ + ++ + +P LT H ++
Sbjct: 141 DDSCVATVGNYHNDVLVFDKESFES-YSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGT 199
Query: 211 VLSGGKDKSVVLWSIQDHITSSA 233
++SG +D ++ W + + S +
Sbjct: 200 LVSGSQDATLSCWDLNAYNESDS 222
Score = 108 (43.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 30/142 (21%), Positives = 61/142 (42%)
Query: 267 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL 326
S P + H + V F P + + D + LWD R + + + H+ +
Sbjct: 270 STKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLR-NLNQRLHTLEGHEDIV 328
Query: 327 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GSPINKFE--GHSAAVLCV 378
+ ++P ++ ++ + SAD ++D + + G P F GH++ + +
Sbjct: 329 TKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDM 388
Query: 379 QWSPDKSSVFGSSAEDGLLNIW 400
W P+ + ++AED +L IW
Sbjct: 389 DWCPNYNWTMATAAEDNILQIW 410
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 231 (86.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 66/205 (32%), Positives = 96/205 (46%)
Query: 29 TTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY 88
T + T + ++++Y WK P LYD + H L WPSL+ +W P++ + K+ +
Sbjct: 49 TVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 108
Query: 89 LSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKHKTIIHPG 141
L T S N LV+A + A H E + + ++ I H G
Sbjct: 109 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEG 168
Query: 142 EVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFA 201
EVNR R +PQN I+AT T S DVL++D P + G N PDL L GHQ +
Sbjct: 169 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEG-YG 225
Query: 202 LAMCPT-EPYVLSGGKDKSVVLWSI 225
L+ ++LS D +V LW I
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDI 250
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 200 (75.5 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 50/159 (31%), Positives = 75/159 (47%)
Query: 277 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA-DLHCVDWNPLD 335
H VED+ + PS F S D +WD R AH D++ + WN
Sbjct: 290 HTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRV 349
Query: 336 DNLILTGSADNSV-RMFDRRNL-TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
NL+ TG ADN V ++D R+L +S+ V +P+ F+ H A + ++W P++ SV G
Sbjct: 350 PNLLATG-ADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGA 408
Query: 394 DGLLNIWDYEKVGKKVEQGPRTT----NYPAGLFFQHAG 428
D +++WD + EQ R + P L F H G
Sbjct: 409 DNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMG 447
Score = 136 (52.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
+R SP+ V + H + + +DW+P + +L+ S DN+ +F + ++ G + +
Sbjct: 232 SRKENSPLYTVNR-HKTEGYALDWSPFEYSLL---SGDNANEIFLTK-YSNGGWQTDSSP 286
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
F H+AAV +QWSP + +VF S + DG IWD V K + T N G+
Sbjct: 287 FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWD---VRNKQKTSALTVNAHPGV 338
Score = 89 (36.4 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 45/183 (24%), Positives = 77/183 (42%)
Query: 52 PVLYDWLANHNLVWPSLSCR-WGPQL--EQATYKNRQRLYLSEQTDGSVPNTLVIANC-E 107
P +Y+ L N + WP LS L E+ + ++ L Q S N L + +
Sbjct: 91 PSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQ 150
Query: 108 VVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIREL--PQNTK---IVATHTDS 162
+ K + + S ++ P ++ HK+I G NR+R P N+ ++A+ ++
Sbjct: 151 LYKTQHDENDDASDNSDVEEDPILE-HKSISTKGACNRVRSARRPANSSKESLLASFHET 209
Query: 163 PDVLIWDVEAQPNRHAVLGATNSRPDL--ILTGHQDNAE-FALAMCPTEPYVLSGGKDKS 219
V IWD+ G SR + + T ++ E +AL P E +LSG
Sbjct: 210 GKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPFEYSLLSGDNANE 269
Query: 220 VVL 222
+ L
Sbjct: 270 IFL 272
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 223 (83.6 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 50/134 (37%), Positives = 74/134 (55%)
Query: 304 ILWDARVG-TS-PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGV 361
++WD R TS P V+ AH A+++C+ +NP + ++ TGSAD +V ++D RNL
Sbjct: 1 MIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-- 57
Query: 362 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPA 420
++ FE H + VQWSP ++ SS D LN+WD K+G+ EQ P + P
Sbjct: 58 ---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE--EQSPEDAEDGPP 112
Query: 421 GLFFQHAGHSPSSS 434
L F H GH+ S
Sbjct: 113 ELLFIHGGHTAKIS 126
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 233 (87.1 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 50/156 (32%), Positives = 79/156 (50%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
++ H +VED+ + P+ A F S D + +WD R + ++ +AH +D++ + WN
Sbjct: 268 FSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNR 327
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ IL+G D ++++D R S G P+ F+ HSA V VQWSP SSVF +S
Sbjct: 328 TEP-FILSGGDDGLLKVWDLRQFQS---GRPVASFKQHSAPVTSVQWSPVDSSVFAASGA 383
Query: 394 DGLLNIWDYEKVGKKVE-QGPRTTNYPAGLFFQHAG 428
D +++ WD + Q P L F H G
Sbjct: 384 DDVISQWDLSVESCDMGGQAEDVKQLPPQLLFLHQG 419
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 209 (78.6 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 267 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDA 324
+VG + GH+ +VED+ + P+ S D + LWD R V V+KAH++
Sbjct: 265 AVGANPL-TGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHES 323
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
D++ + WN +NLI++G D ++++ + + G P+ F+ H++ + V W P +
Sbjct: 324 DVNVISWNR-HENLIVSGGDDGELKIWSLKTIQ---FGQPVALFKYHNSPITSVDWHPHE 379
Query: 385 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHS 430
++ F +S ED IWD + + + P L F H G +
Sbjct: 380 TTTFMASGEDDQTTIWD---IATEADGQTNIEGVPPQLMFVHMGQN 422
Score = 67 (28.6 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 124 EEARSPFVKKHKTII-HPGEVNRIRE--LPQNTKIVATHTDSPDVLIWDV-EAQPNRHAV 179
E+ R P K H I H G +NRIR L +T + A +D V +W++ +A H +
Sbjct: 150 EKKREP--KMHAVSIPHYGGINRIRSDRLGDST-VCACWSDQGRVQVWNITDALNYTHGM 206
Query: 180 LGATNSRPDLI----LTGHQDNAE-FALAMCPTEPYVLSGGKD-KSVVLWSIQD 227
G + + I T + E + LA + L+ G K + LW +++
Sbjct: 207 SGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKE 260
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 158 (60.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 54/192 (28%), Positives = 89/192 (46%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSV 97
V+ ++ +WK+ +LYD++ L WPSLS +G + N Q + + T
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENNVLNQIVCVGTHTSNKE 102
Query: 98 PNTLVIANCEVVKP--RVAAAEHISQFNEE--------ARSPFVKKHKTIIHPGEVNRIR 147
PN L + C+V+ P +V + I + NE + F K K I H GEVNRI+
Sbjct: 103 PNFLYV--CDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSK-IAHTGEVNRIK 159
Query: 148 ELPQNTK-IVATHTDSPDVLIWDVEAQPNRHAVLGATNS-RPDLILTGHQDNAEFALAMC 205
+P K V T +V ++D+ N+H + + P++ G+Q + F L
Sbjct: 160 FVPLEKKNFVVTKAVDGNVHLFDI----NKHKIETVDDKMNPEVSFVGNQSDG-FGLDFQ 214
Query: 206 PTEPYVLSGGKD 217
P + Y+L+ D
Sbjct: 215 PIKKYILTCAND 226
Score = 120 (47.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 29/155 (18%), Positives = 77/155 (49%)
Query: 277 HEDTVEDVTFCPSSAQEFC-SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
++ V D++ P++ + D+ ++++D R+ ++ + ++ V N
Sbjct: 250 YKSPVNDIS--PTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFT 307
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
L +GS + ++++D + P + H A++ + +SP+ +S+ S++ +
Sbjct: 308 -GLFASGSDNGKIKVWDLKKFHE-----PQHIINAHKEAIIRLNFSPNDASILASASNNR 361
Query: 396 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHS 430
+N++D K+G++++ ++ P+ L F H GH+
Sbjct: 362 FINVYDLNKIGEELD-AIDLSDGPSELIFSHGGHT 395
Score = 84 (34.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 27/117 (23%), Positives = 52/117 (44%)
Query: 294 FCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 353
F S D+ + +WD + P + AH + ++++P D +++ + S + + ++D
Sbjct: 310 FASGSDNGKIKVWDLKKFHEPQ-HIINAHKEAIIRLNFSPNDASILASASNNRFINVYDL 368
Query: 354 RNL--------TSNGVGSPINKFEGHSAAVLCVQWSPDKS-SVF-GSSAEDGLLNIW 400
+ S+G I GH+ V W+ K +F GS++ED L W
Sbjct: 369 NKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFW 425
Score = 51 (23.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVG 311
P+ I N H++ + + F P+ A S ++ + ++D ++G
Sbjct: 330 PQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIG 372
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 158 (60.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 54/192 (28%), Positives = 89/192 (46%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSV 97
V+ ++ +WK+ +LYD++ L WPSLS +G + N Q + + T
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENNVLNQIVCVGTHTSNKE 102
Query: 98 PNTLVIANCEVVKP--RVAAAEHISQFNEE--------ARSPFVKKHKTIIHPGEVNRIR 147
PN L + C+V+ P +V + I + NE + F K K I H GEVNRI+
Sbjct: 103 PNFLYV--CDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSK-IAHTGEVNRIK 159
Query: 148 ELPQNTK-IVATHTDSPDVLIWDVEAQPNRHAVLGATNS-RPDLILTGHQDNAEFALAMC 205
+P K V T +V ++D+ N+H + + P++ G+Q + F L
Sbjct: 160 FVPLEKKNFVVTKAVDGNVHLFDI----NKHKIETVDDKMNPEVSFVGNQSDG-FGLDFQ 214
Query: 206 PTEPYVLSGGKD 217
P + Y+L+ D
Sbjct: 215 PIKKYILTCAND 226
Score = 120 (47.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 29/155 (18%), Positives = 77/155 (49%)
Query: 277 HEDTVEDVTFCPSSAQEFC-SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
++ V D++ P++ + D+ ++++D R+ ++ + ++ V N
Sbjct: 250 YKSPVNDIS--PTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFT 307
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
L +GS + ++++D + P + H A++ + +SP+ +S+ S++ +
Sbjct: 308 -GLFASGSDNGKIKVWDLKKFHE-----PQHIINAHKEAIIRLNFSPNDASILASASNNR 361
Query: 396 LLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHS 430
+N++D K+G++++ ++ P+ L F H GH+
Sbjct: 362 FINVYDLNKIGEELD-AIDLSDGPSELIFSHGGHT 395
Score = 84 (34.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 27/117 (23%), Positives = 52/117 (44%)
Query: 294 FCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 353
F S D+ + +WD + P + AH + ++++P D +++ + S + + ++D
Sbjct: 310 FASGSDNGKIKVWDLKKFHEPQ-HIINAHKEAIIRLNFSPNDASILASASNNRFINVYDL 368
Query: 354 RNL--------TSNGVGSPINKFEGHSAAVLCVQWSPDKS-SVF-GSSAEDGLLNIW 400
+ S+G I GH+ V W+ K +F GS++ED L W
Sbjct: 369 NKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFW 425
Score = 51 (23.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVG 311
P+ I N H++ + + F P+ A S ++ + ++D ++G
Sbjct: 330 PQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIG 372
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 229 (85.7 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 70/245 (28%), Positives = 116/245 (47%)
Query: 211 VLSGGKDKSVVLWSIQDHITSSATDPATAKSAG-----SSGSI----IKQSPK------P 255
V + ++SV +W+I +H+ + + K S+ SI + SPK
Sbjct: 209 VATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLAT 268
Query: 256 GDGNDK-----AADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 310
GD N+ A++ + GH ++VED+ + PS + F S D + +WD R
Sbjct: 269 GDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRK 328
Query: 311 GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG 370
P I V KAH AD++ + W+ + L+++G D S R++D R N SP++ F+
Sbjct: 329 -PKPAITV-KAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDN---SPVSDFKY 383
Query: 371 HSAAVLCVQWSP-DKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN------YPAGLF 423
H+ + ++W+P ++S V SS++D + IWD+ E N YP LF
Sbjct: 384 HTGPITSIEWNPYEESQVIVSSSDDQV-TIWDFSLEEDTEEFTNANANPDDDFQYPPQLF 442
Query: 424 FQHAG 428
F H G
Sbjct: 443 FIHQG 447
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 55/229 (24%), Positives = 95/229 (41%)
Query: 137 IIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDV--EAQPNRHAVLGATNSRPDLILTGH 194
I H G VNRIR + Q + IVAT +D+ V IW++ + + + + P ++ H
Sbjct: 190 INHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNH 249
Query: 195 QDNAEFALAMCPTEPYVLSGGK-DKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSP 253
+AL P L+ G + S+ + + + ++ TD K S I+ SP
Sbjct: 250 SIEG-YALDWSPKIAGRLATGDCNNSIFVTNASE--STWKTDTQAFKGHTESVEDIQWSP 306
Query: 254 KPG--------DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
D + D P H V +++ + S DD +
Sbjct: 307 SEEKVFASCSIDQTVRIWDIRKPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRV 366
Query: 306 WDARV--GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
WD R SPV K H + ++WNP +++ ++ S+D+ V ++D
Sbjct: 367 WDLRAFKDNSPVSDF-KYHTGPITSIEWNPYEESQVIVSSSDDQVTIWD 414
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 216 (81.1 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 95/393 (24%), Positives = 165/393 (41%)
Query: 39 AVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGS 96
+VD++Y WKS VP++YD+++ L WPSL+ +W P Q +Q L + T G
Sbjct: 9 SVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGE 68
Query: 97 VPNTLVIANCEVVKPRVAAAEHISQFNEEARS--PFVKKHKTII----HPGEVNRIRELP 150
N L A + K ++ + + EE +S P + + I H E+ R R +P
Sbjct: 69 EENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMP 128
Query: 151 QNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCP-TEP 209
Q+ IVAT V ++ +R L +T L H+DN +AL+ +
Sbjct: 129 QDPNIVATINGQGTVFLY------SRSEGLQST-------LKFHKDNG-YALSFSTLVKG 174
Query: 210 YVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSS--GSIIKQSPKPGDGNDK--AADG 265
+LSG D +V LW + S DP + II + D
Sbjct: 175 RLLSGSDDHTVALWEV-----GSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSE 229
Query: 266 PSVGPRGIYNGHEDTVEDVTFCPS----------SAQEFCSVGDDSCLILWDARVGTSPV 315
S+ + T++ V CP S+ + G DS + L+D R P+
Sbjct: 230 DSLLKINDVRANNTTIDTVK-CPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPL 288
Query: 316 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL--------TSNGVGSPINK 367
+ DA ++ ++++ D ++++ +DN + M+D + + +GV I
Sbjct: 289 HHMSGHEDA-VNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMV 347
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
GH ++V +P + S+ E+ +L +W
Sbjct: 348 HAGHRSSVNDFDLNPQIPWLVASAEEENILQVW 380
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 57/248 (22%), Positives = 102/248 (41%)
Query: 194 HQDNAEFALAMCPTEPYVLS--GGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQ 251
H++ A M P +P +++ G+ +V L+S + + S+ A S +++K
Sbjct: 117 HEEEITRARYM-PQDPNIVATINGQG-TVFLYSRSEGLQSTLKFHKDNGYALSFSTLVKG 174
Query: 252 SPKPGDGNDKAA------DGPSVGPRGIYNG-HEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
G + A G P +N H D + D + + F +V +DS L
Sbjct: 175 RLLSGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLK 234
Query: 305 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 364
+ D R + + V+ + + ++ NL+ D+ V ++D RN+ P
Sbjct: 235 INDVRANNTTIDTVKCPQP--FNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKE-----P 287
Query: 365 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 424
++ GH AV +++S V SS D L +WD +++G + P L
Sbjct: 288 LHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPE-LIM 346
Query: 425 QHAGHSPS 432
HAGH S
Sbjct: 347 VHAGHRSS 354
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 181 (68.8 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 49/203 (24%), Positives = 93/203 (45%)
Query: 37 QHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTD 94
++ + + + WK LY+ L L WPSLS +W +E T K + RL L
Sbjct: 17 ENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAA 76
Query: 95 GSVPNTLVIANCEVVKPRVAAAEHISQFNEEARS--PFVKKH-------KTIIHPGEVNR 145
+PN L +A+ ++ + + +NE+ + +H + I+H G+VNR
Sbjct: 77 EGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNR 136
Query: 146 IRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMC 205
+R +PQN I+AT + + I+D ++ + A P++ L GH+ F L+
Sbjct: 137 VRHMPQNPNIIATMSSCGNAYIFD----RTKYTSMPAEEFLPNISLIGHKKEG-FGLSWN 191
Query: 206 PTEPY-VLSGGKDKSVVLWSIQD 227
+ +++ D ++ W + +
Sbjct: 192 RQQNCRLVTAANDSKILEWDLNN 214
Score = 77 (32.2 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 310
++ GH+ TV +V F P AQ SV DD+ L +W V
Sbjct: 368 VHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWKPNV 405
Score = 61 (26.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 23/112 (20%), Positives = 54/112 (48%)
Query: 329 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNG-VGSPINKFEGHSAAVLCVQWSPDKSSV 387
+ WN + ++T + D+ + +D N + + +P+ F + V V++ P +++
Sbjct: 188 LSWNRQQNCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNL 247
Query: 388 FGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSSIKFVL 439
+ + ++G+ I D ++ + + + +N P LF H+PS + F L
Sbjct: 248 YIAVNDNGIAFICD-NRLQQTCSKTVKASN-P--LF--SVRHNPSIATLFAL 293
Score = 52 (23.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 370 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
GH V V + P ++ S A+D L+IW
Sbjct: 371 GHKGTVNEVDFDPFEAQCIASVADDNELHIW 401
Score = 49 (22.3 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 289 SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 348
S+ QE+C V W+ +P+ V H ++ VD++P + I + + DN +
Sbjct: 348 SACQEYCYV--------WNFNKA-NPLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNEL 398
Query: 349 RMFDRRNLTSN 359
++ + N+ N
Sbjct: 399 HIW-KPNVIVN 408
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 49/164 (29%), Positives = 81/164 (49%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDW 331
+ GH +VED+ + P+ F S D+ + +WD R S ++ AHD D++ ++W
Sbjct: 251 FMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINW 310
Query: 332 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
+ + +L+G D +++++D R S GSP+ F+ H A + V+W P S VF +S
Sbjct: 311 SRREP-FLLSGGDDGALKIWDLRQFKS---GSPVATFKQHVAPITSVEWHPQDSGVFAAS 366
Query: 392 AEDGLLNIWDYEKVGKKVEQG-----PRTTNYPAGLFFQHAGHS 430
D + WD V + E G P + P L F H G +
Sbjct: 367 GADNQITQWDLA-VERDPEAGDTETDPGLADLPQQLLFVHQGET 409
Score = 116 (45.9 bits), Expect = 0.00095, P = 0.00095
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 297 VGDDSCL--ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
V D L L D + P+ H + +DW+P +LTG ++ ++
Sbjct: 181 VDDPQALATFLRDEQARVKPIFTFA-GHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPT 239
Query: 355 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 408
+ S V F GH+ +V +QWSP + +VF S + D + IWD K
Sbjct: 240 DGGSWHVDQ--RPFMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK 291
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 49/161 (30%), Positives = 78/161 (48%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 333
GH +VED+ + P+ F S D+ + +WD R S ++ AHD D++ + W+
Sbjct: 259 GHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSR 318
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 319 REP-FLLSGGDDGALKIWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 374
Query: 394 DGLLNIWDY----EKVGKKVEQGPRTTNYPAGLFFQHAGHS 430
D + WD + VE P + P L F H G +
Sbjct: 375 DHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET 415
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 213 (80.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 50/162 (30%), Positives = 80/162 (49%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--GTSPVIKVEKAHDADLHCVDWNP 333
GH +VED+ + P+ F S D+ + +WD R G + ++ AHD D++ + W+
Sbjct: 259 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSR 318
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 319 REP-FLLSGGDDGALKVWDLRQFKS---GSPVATFKQHMAPVTSVEWHPQDSGVFAASGA 374
Query: 394 DGLLNIWDYEKVGKKVEQGPRTTN-----YPAGLFFQHAGHS 430
D + WD V + E G T+ P L F H G +
Sbjct: 375 DNQITQWDLA-VERDPESGETETDPGLAALPQQLLFVHQGET 415
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 303 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
+ L D + P+ H + +DW+P +LTG +V ++ S V
Sbjct: 195 IFLRDEQARIKPIFSFA-GHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVD 253
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
F GH+ +V +QWSP + +VF S + D + IWD
Sbjct: 254 Q--RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWD 290
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 213 (80.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 50/162 (30%), Positives = 80/162 (49%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 333
GH +VED+ + P+ F S D+ + +WD R S ++ AHD D++ ++W+
Sbjct: 259 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSH 318
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 319 REP-FLLSGGDDGALKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 374
Query: 394 DGLLNIWDYEKVGKKVEQG-----PRTTNYPAGLFFQHAGHS 430
D + WD V + E G P + P L F H G +
Sbjct: 375 DNQITQWDLA-VERDPEAGDAETDPGLADLPQQLLFVHQGET 415
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 212 (79.7 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 50/162 (30%), Positives = 80/162 (49%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV--GTSPVIKVEKAHDADLHCVDWNP 333
GH +VED+ + P+ F S D+ + +WD R G + ++ AHD D++ + W+
Sbjct: 258 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSR 317
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 318 REP-FLLSGGDDGTLKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 373
Query: 394 DGLLNIWDYEKVGKKVEQGPRTTN-----YPAGLFFQHAGHS 430
D + WD V + E G T+ P L F H G +
Sbjct: 374 DNQITQWDLA-VERDPESGETETDPGLAALPQQLLFVHQGET 414
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 303 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
+ L D + P+ H + +DW+P +LTG ++ ++ + S V
Sbjct: 194 IFLRDEQARVKPIFSFA-GHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVD 252
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
F GH+ +V +QWSP + +VF S + D + IWD
Sbjct: 253 Q--RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWD 289
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 211 (79.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 94/414 (22%), Positives = 161/414 (38%)
Query: 27 ESTTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NR 84
E +RT + ++++Y WK P LYD + + L WP+L+ +W P + A+ K +
Sbjct: 13 EEQEEERT-EEKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQDASDKPYST 71
Query: 85 QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVN 144
RL L T N L IA ++ P + + E K P E+N
Sbjct: 72 HRLLLGTHTSSDAQNYLQIAQVQLPNPNAPNPDDYDEERGEIGGYGGSSKKA---PMEIN 128
Query: 145 R--IRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFAL 202
++++ ++ + V+IWD ++ G N P + L GH+ F L
Sbjct: 129 FKIVQKIDHKGEV-----NKARVMIWD--RSKHQSVPTGTVN--PQMELLGHKQEG-FGL 178
Query: 203 AMCPTEPYVLSGGKDKSV------VLWSIQD--HITSSATD----PATAKSAGS-SGSII 249
+ P L+ G+D + L ++ H +S D P + G+ S I
Sbjct: 179 SWSPHVAGHLATGRDLTTYTKNNKALQPVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDIT 238
Query: 250 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 309
Q A + G H D + + F P++ + D + LWD R
Sbjct: 239 LQILDTRVAETTRAAATAEGQ------HRDAINAIAFNPAAETVLATGSADKTIGLWDLR 292
Query: 310 VGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGV------GS 363
+ + +E H + + W+P ++ ++ + S D + +D G
Sbjct: 293 NLKTKLHTLEN-HTDSVTSISWHPFEEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGP 351
Query: 364 PINKFE--GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVEQGP 413
P F GH+ + W+ + V S+AED LL +W VGK +E P
Sbjct: 352 PELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQVWKVADAIVGKDMEDVP 405
Score = 196 (74.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVG--TSPVIKVEKAHDADLH 327
P Y H V DV P + +V DD L + D RV T E H ++
Sbjct: 206 PVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAIN 265
Query: 328 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 387
+ +NP + ++ TGSAD ++ ++D RNL + ++ E H+ +V + W P + +V
Sbjct: 266 AIAFNPAAETVLATGSADKTIGLWDLRNLKTK-----LHTLENHTDSVTSISWHPFEEAV 320
Query: 388 FGSSAEDGLLNIWDYEKVGKKVEQGPRTT-NYPAGLFFQHAGHS 430
S++ D + WD + G+ EQ P + P L F H GH+
Sbjct: 321 LASASYDRKIMFWDLSRAGE--EQTPEDAQDGPPELLFMHGGHT 362
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 207 (77.9 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 49/162 (30%), Positives = 78/162 (48%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 333
GH +VED+ + P+ F S D+ + +WD R S ++ AH+ D++ + W+
Sbjct: 258 GHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSR 317
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ +L+G D +++++D R S GSP+ F+ H A V V+W P S VF +S
Sbjct: 318 -QEPFLLSGGDDGALKVWDLRQFKS---GSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 373
Query: 394 DGLLNIWDYEKVGKKVEQG-----PRTTNYPAGLFFQHAGHS 430
D + WD V + E G P P L F H G +
Sbjct: 374 DNQITQWDLA-VERDPEAGDTETDPGLVGLPQQLLFVHQGET 414
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 297 VGDDSCL--ILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
V D L L D + P+ H + +DW+P +LTG ++ ++
Sbjct: 186 VDDPQALATFLRDEQARVKPIFAFS-GHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT 244
Query: 355 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 408
+ S V F GH+ +V +QWSP + +VF S + D + IWD K
Sbjct: 245 DSGSWHVDQ--RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK 296
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 194 (73.4 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 50/159 (31%), Positives = 80/159 (50%)
Query: 266 PSVGPRGI--YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 323
P+VG R + + GHE + + P F S D L +WD + T+ V V AH
Sbjct: 142 PTVG-RSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK--TTGVRIVVPAHQ 198
Query: 324 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 383
A++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 199 AEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPF 253
Query: 384 KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
+SV S + D + W++ K +E T + GL
Sbjct: 254 YASVLASCSYDFTVRFWNFSKPNPLLETVEHHTEFTCGL 292
Score = 170 (64.9 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ ++ + D L LWD P ++V K H +++ VDW+ +
Sbjct: 68 DALFDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGP-LQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D +V+++D VG + F+GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 181 RIWDVKTTGVRI 192
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 192 (72.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 266 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
P+VG + GHE + + P F S D L +WD + T+ V V AH A
Sbjct: 142 PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVK--TTGVRIVVPAHQA 199
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 200 EILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VQQPVFELLGHTYAIRRVKFSPFH 254
Query: 385 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
+SV S + D + W++ K +E T + GL
Sbjct: 255 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGL 292
Score = 176 (67.0 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 40/132 (30%), Positives = 66/132 (50%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 68 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTARATGP-LQVFKEHTQEVYSVDWSQTRGEQ 126
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D +V+++D VG + F GH + + WSP F SS+ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTL 180
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 181 RIWDVKTTGVRI 192
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 191 (72.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 266 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
P+VG + GHE + + P F S D L +WD + T+ V V AH A
Sbjct: 137 PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--TTGVRIVIPAHQA 194
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 195 EILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 249
Query: 385 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
+SV S + D + W++ K +E T + GL
Sbjct: 250 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGL 287
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 40/132 (30%), Positives = 68/132 (51%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ D+
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRDEQ 121
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D +V+++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 176 RIWDVKTTGVRI 187
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 50/161 (31%), Positives = 78/161 (48%)
Query: 266 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHD 323
P+VG + GHE + + P F S D L +WD + G VI AH
Sbjct: 142 PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIP---AHQ 198
Query: 324 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 383
A++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 199 AEILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPF 253
Query: 384 KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFF 424
+SV S + D + W++ K +E T + GL F
Sbjct: 254 HASVLASCSYDFTVRFWNFSKPDSLLETVEHHTEFTCGLDF 294
Score = 168 (64.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ ++ + D L LWD P ++V K H +++ VDW+ +
Sbjct: 68 DGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGP-LQVYKEHAQEVYSVDWSQTRGEQ 126
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D +V+++D VG + F GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 181 RIWDVKAAGVRI 192
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 189 (71.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 48/158 (30%), Positives = 78/158 (49%)
Query: 266 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
P+VG + GHE + + P F S D L +WD + ++ V V AH A
Sbjct: 142 PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--STGVRIVVPAHQA 199
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 200 EILSCDWCKYNENLLVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 254
Query: 385 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
+SV S + D + W++ K +E T + GL
Sbjct: 255 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGL 292
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 68 DGLFDVTWSENNEHILVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D +V+++D VG + F GH + + WSP F S++ D L
Sbjct: 127 LVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 180
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 181 RIWDVKSTGVRI 192
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 188 (71.2 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 48/158 (30%), Positives = 77/158 (48%)
Query: 266 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
P+VG + GHE + + P F S D L +WD + T+ V V AH
Sbjct: 137 PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--TTGVRIVIPAHQT 194
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 195 EILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 249
Query: 385 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
+SV S + D + W++ K +E T + GL
Sbjct: 250 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGL 287
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/132 (29%), Positives = 67/132 (50%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ ++ + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 63 DGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 121
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D +V+++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 176 RIWDVKTTGVRI 187
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 188 (71.2 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 48/158 (30%), Positives = 77/158 (48%)
Query: 266 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
P+VG + GHE + + P F S D L +WD + T+ V V AH
Sbjct: 137 PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK--TAGVRIVIPAHQT 194
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
++ DW ++NL++TG+ D S+R +D RN V P+ + GH+ A+ V++SP
Sbjct: 195 EILSCDWCKYNENLVVTGAVDCSLRGWDLRN-----VRQPVFELLGHTYAIRRVKFSPFH 249
Query: 385 SSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
+SV S + D + W++ K +E T + GL
Sbjct: 250 ASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGL 287
Score = 174 (66.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ + + D L LWD T P ++V K H +++ VDW+ +
Sbjct: 63 DGLFDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGP-LQVYKEHTQEVYSVDWSQTRGEQ 121
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D +V+++D VG+ + F GH + + WSP F S++ D L
Sbjct: 122 LVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTL 175
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 176 RIWDVKTAGVRI 187
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 188 (71.2 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 48/159 (30%), Positives = 78/159 (49%)
Query: 266 PSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK-VEKAHD 323
P+VG + GHE + + P F S D L +WD + +P ++ V AH
Sbjct: 140 PAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVK---APGVRLVIPAHQ 196
Query: 324 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 383
A++ DW D+NL++TG+ D S++ +D RN V P+ GH+ AV V++SP
Sbjct: 197 AEILSCDWCKYDENLLVTGAVDCSLKGWDLRN-----VRQPVFILLGHTYAVRRVKFSPF 251
Query: 384 KSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
+++ S + D + WD+ K +E T + GL
Sbjct: 252 HATLLASCSYDFTVRFWDFSKPNPLLETVEHHTEFTCGL 290
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL-DDN 337
D + DVT+ ++ + D L +WD P ++V K H + + VDW+ +
Sbjct: 66 DGLFDVTWSENNEHVLITSSGDGSLQIWDIAKPKGP-LQVYKEHTQEAYSVDWSQTRGEQ 124
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L+++GS D + +++D VG + F+GH + WSP F S++ D L
Sbjct: 125 LVVSGSWDQTAKLWDP------AVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTL 178
Query: 398 NIWDYEKVGKKV 409
IWD + G ++
Sbjct: 179 RIWDVKAPGVRL 190
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 175 (66.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/161 (24%), Positives = 75/161 (46%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWN 332
+ GH +VE++ + P+ F S D + +WD R + SP + V K + D++ + W+
Sbjct: 299 FRGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNV-KISNTDVNVMTWS 357
Query: 333 PLDDNLILTGSADNSVRMFDRR----NLTSNG--VGSPINKFEGHSAAVLCVQWSPDKSS 386
+L+ TG+ D ++D R N +S+ SP+ F H + ++W P S
Sbjct: 358 KQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDS 417
Query: 387 VFGSSAEDGLLNIWDYE-KVGKKVEQGPRTTNYPAGLFFQH 426
V + D + +WD ++ ++ + + P L F H
Sbjct: 418 VIAVGSADNTVTLWDLAVELDEEESREAGLADVPPQLLFVH 458
Score = 134 (52.2 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 320 KAHDADLHCVDWNPLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 378
+ H ++ + +DW+PL +LTG D + + R G + F GH+++V +
Sbjct: 252 RMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTE--GGGWVTDTRAFRGHASSVEEL 309
Query: 379 QWSPDKSSVFGSSAEDGLLNIWD 401
QWSP++ +VF S++ DG + +WD
Sbjct: 310 QWSPNEKNVFASASSDGTVKVWD 332
Score = 56 (24.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 35/134 (26%), Positives = 54/134 (40%)
Query: 52 PVLYDWLANHNLVWPSLS---CRWGPQLEQATYKNRQRLYLSEQTDG--SVPNTLVIANC 106
P YD L + WP LS R + TY Q +G + N L++
Sbjct: 93 PSTYDMLHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYAVTGTQAEGRRAKENELMVLKL 152
Query: 107 EVV--KPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIR--ELPQN--TK----IV 156
+ R + S +++ + +HK+I NRIR + PQ+ TK I
Sbjct: 153 SGLGKMERENETDSESDSDDDEGGEAILEHKSIPLGSTANRIRAHQTPQSDITKPPQTIT 212
Query: 157 ATHTDSPDVLIWDV 170
AT ++ V+I DV
Sbjct: 213 ATMLENSQVVIHDV 226
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 142 EVNRIRELPQNTKIVATHTDSPDVLIWDV 170
EV++ +P TK+ SPD +D+
Sbjct: 70 EVDQQTFIPGRTKLAPGEVLSPDPSTYDM 98
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 186 (70.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP--VIKVEKAHDADLHCVDWNP 333
GH +VED+ + P+ S D + +WD R ++ E AH +D++ + WN
Sbjct: 267 GHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNR 326
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
++ I +G D + ++D R S PI F+ H+ + V+WSP +++V S +
Sbjct: 327 -NEPFIASGGDDGYLHIWDLRQFQSK---KPIATFKHHTDHITTVEWSPAEATVLASGGD 382
Query: 394 DGLLNIWDY--EK-VGKKVE--QGPRTTN-YPAGLFFQHAG 428
D + +WD EK + + V+ Q N P L F H G
Sbjct: 383 DDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQG 423
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 49/136 (36%), Positives = 70/136 (51%)
Query: 266 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD 325
P P + GHE+ + DV F S A+ S DD L LWD G+ +IK H
Sbjct: 59 PIAEPVQEFTGHENGISDVAFS-SDARFIVSASDDKTLKLWDVETGS--LIKTLIGHTNY 115
Query: 326 LHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS 385
CV++NP N+I++GS D +VR++D +T+ G + HS V V ++ D S
Sbjct: 116 AFCVNFNP-QSNMIVSGSFDETVRIWD---VTT---GKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 386 SVFGSSAEDGLLNIWD 401
+ SS+ DGL IWD
Sbjct: 169 LIV-SSSYDGLCRIWD 183
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 58/222 (26%), Positives = 101/222 (45%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH + A F + P ++SG D++V +W + + + +DP TA G
Sbjct: 109 LIGHTNYA-FCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 247 SIIKQSPKPGDGNDKAAD-GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLI 304
S+I S DG + D G + + + V V F P+ +F VG D+ L
Sbjct: 168 SLIVSSSY--DGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG--KFILVGTLDNTLR 223
Query: 305 LWDARVGTSPVIKVEKAHDADLHCVD--WNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LW+ + ++ +K H +C+ ++ + I++GS DN V M++ L S +
Sbjct: 224 LWN--ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE---LNSKKL- 277
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
+ K EGH+ V+ V P ++ + S + D + IW +K
Sbjct: 278 --LQKLEGHTETVMNVACHPTENLI-ASGSLDKTVRIWTQKK 316
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 53/222 (23%), Positives = 97/222 (43%)
Query: 141 GEVNRIRELP--QNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNA 198
G N I ++ + + + + +D + +WDVE T S ++ GH + A
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVE-----------TGSLIKTLI-GHTNYA 116
Query: 199 EFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSGSIIKQSPK 254
F + P ++SG D++V +W + + + +DP TA GS+I S
Sbjct: 117 -FCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSY 175
Query: 255 PGDGNDKAAD-GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGT 312
DG + D G + + + V V F P+ +F VG D+ L LW+ + +
Sbjct: 176 --DGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG--KFILVGTLDNTLRLWN--ISS 229
Query: 313 SPVIKVEKAHDADLHCVD--WNPLDDNLILTGSADNSVRMFD 352
+ +K H +C+ ++ + I++GS DN V M++
Sbjct: 230 AKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 128 (50.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 68/295 (23%), Positives = 131/295 (44%)
Query: 125 EARSPFVKKHKT---IIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPN-RHAVL 180
E +P + K KT I H G+VN++R +PQ I+A+ + +++I++ + ++ +L
Sbjct: 139 ELTTPSLNKTKTLQKINHLGDVNKVRYMPQKPNILASANNLGNLVIYERTRHKSFKNTIL 198
Query: 181 GATN-SRPDLILTG-HQDNAE--FALAMCP-TEPYVLSGGKDKSVVLWSIQDHITSSATD 235
T+ S+ + L H + FA+ +E +LS + V L+ ++ + + + +
Sbjct: 199 DDTDLSKVQVRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNE 258
Query: 236 PATAKSAGSSGSIIKQSPK------PGDGND--KAADGPSVGPRGIYNGH-EDTVEDVTF 286
++ + I+ P D N K D + + N + ++V V
Sbjct: 259 SQYWENNAIGVNDIEWFPTHDSLFCTADDNGWLKLYDTRNQSA-AVQNANIGNSVNSVAC 317
Query: 287 CPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 345
P A + GD + +I +WD R + + ++ H + + WNP N++ + S+D
Sbjct: 318 NPGYATGLAT-GDSNGVIKMWDIRNFDNSLSELH-GHSDSVTQLKWNPKCHNILGSSSSD 375
Query: 346 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
+SV++ D N S I GH V WS + S A+D L++W
Sbjct: 376 HSVKLHDMSN------DSTIFTHLGHMLGVNDFDWSYADPWMVASVADDNSLHVW 424
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/121 (25%), Positives = 62/121 (51%)
Query: 281 VEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLIL 340
V D+ + P+ FC+ D+ L L+D R ++ V + ++ V NP +
Sbjct: 269 VNDIEWFPTHDSLFCTADDNGWLKLYDTRNQSAAVQNANIGNS--VNSVACNPGYATGLA 326
Query: 341 TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
TG ++ ++M+D RN ++ +++ GHS +V ++W+P ++ GSS+ D + +
Sbjct: 327 TGDSNGVIKMWDIRNFDNS-----LSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLH 381
Query: 401 D 401
D
Sbjct: 382 D 382
Score = 102 (41.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 27 ESTTTKRTAHQHAVDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQL 76
E T + +A Y WK P+LYD+L ++L+WPSLS ++ P +
Sbjct: 26 EDTPVEESAIDEKTQQNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDI 75
Score = 96 (38.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
D+ +DWN + L+L+ + V ++D + S + +E ++ V ++W P
Sbjct: 220 DIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNES-QYWENNAIGVNDIEWFPTH 278
Query: 385 SSVFGSSAEDGLLNIWD 401
S+F ++ ++G L ++D
Sbjct: 279 DSLFCTADDNGWLKLYD 295
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 164 (62.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 37/158 (23%), Positives = 77/158 (48%)
Query: 278 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDD 336
+ ++ED+ + F + G D + +WD R P + V A +D++ + W+ +
Sbjct: 327 QSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVI-ASKSDVNVISWSSKIN 385
Query: 337 NLILTGSADNSVRMFDRRNLTSNGVG--SPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
+L+ +G D S ++D RN T+N SP+ ++ H + + + ++P S+ S+ED
Sbjct: 386 HLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVSSED 445
Query: 395 GLLNIWDY------EKVGKKVEQGPRTTNYPAGLFFQH 426
+ +WD E++ ++ ++ + P L F H
Sbjct: 446 NTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVH 483
Score = 64 (27.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 34/134 (25%), Positives = 57/134 (42%)
Query: 52 PVLYDWLANHNLVWPSLSCR-WGPQL--EQATYKNRQRLYLSEQTDGSVPNTLVIANCE- 107
P +Y+ L N NL WP L+ L E+ +Y L + Q + N L+
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 108 ----VVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELP--QNTK--IVATH 159
+VK E +++ S + ++I NRIR P Q T + A+
Sbjct: 180 LAKTLVKDENEEDEEDEDDDDDVDSDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASM 239
Query: 160 TDSPDVLIWDVEAQ 173
+++ +V I+D+ AQ
Sbjct: 240 SENGEVYIFDLSAQ 253
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 164 (62.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 37/158 (23%), Positives = 77/158 (48%)
Query: 278 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDD 336
+ ++ED+ + F + G D + +WD R P + V A +D++ + W+ +
Sbjct: 327 QSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVI-ASKSDVNVISWSSKIN 385
Query: 337 NLILTGSADNSVRMFDRRNLTSNGVG--SPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
+L+ +G D S ++D RN T+N SP+ ++ H + + + ++P S+ S+ED
Sbjct: 386 HLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVSSED 445
Query: 395 GLLNIWDY------EKVGKKVEQGPRTTNYPAGLFFQH 426
+ +WD E++ ++ ++ + P L F H
Sbjct: 446 NTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVH 483
Score = 64 (27.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 34/134 (25%), Positives = 57/134 (42%)
Query: 52 PVLYDWLANHNLVWPSLSCR-WGPQL--EQATYKNRQRLYLSEQTDGSVPNTLVIANCE- 107
P +Y+ L N NL WP L+ L E+ +Y L + Q + N L+
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 108 ----VVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELP--QNTK--IVATH 159
+VK E +++ S + ++I NRIR P Q T + A+
Sbjct: 180 LAKTLVKDENEEDEEDEDDDDDVDSDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASM 239
Query: 160 TDSPDVLIWDVEAQ 173
+++ +V I+D+ AQ
Sbjct: 240 SENGEVYIFDLSAQ 253
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 146 (56.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 34/156 (21%), Positives = 73/156 (46%)
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-SPVIKVEKAHDADLHCVDWNPLDDNL 338
++ED+ + + + F + G D + +WD R P I V KA + D++ + W+ L
Sbjct: 323 SIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISV-KASNTDVNVISWSDKIGYL 381
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGS--PINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 396
+ +G + + ++D R T + + P+ +++ H A+ + ++P S+ +ED
Sbjct: 382 LASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNT 441
Query: 397 LNIWDY------EKVGKKVEQGPRTTNYPAGLFFQH 426
+ +WD E++ ++ + P L F H
Sbjct: 442 VTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFVH 477
Score = 77 (32.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 46/201 (22%), Positives = 82/201 (40%)
Query: 52 PVLYDWLANHNLVWPSLSCRWGPQL---EQATYKNRQRLYLSEQTDGSVPNTL-VIANCE 107
P +Y+ L N N+ WP L+ P E+ Y L + Q+ N L V+A
Sbjct: 115 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLTTATQSSRKKENELMVLALSN 174
Query: 108 VVKPRVA---AAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELP---QNTKIV-ATHT 160
+ K + E + +E+ P ++ + NR++ P N +++ AT +
Sbjct: 175 LAKTLLKDDNEGEDDEEDDEDDVDPVIENENIPLRD-TTNRLKVSPFAISNQEVLTATMS 233
Query: 161 DSPDVLIWDVEAQPNRHAVLG----ATNSRPDLILTGHQDNAEFALAMCPT--EPYVLSG 214
++ DV I+++ Q + G + RP + H + + L P +LSG
Sbjct: 234 ENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSG 293
Query: 215 GKDKSVVLWSIQDHITSSATD 235
D S ++ Q H + TD
Sbjct: 294 --DCSGQIYFTQRHTSRWVTD 312
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 171 (65.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 48/158 (30%), Positives = 75/158 (47%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR-VGTSPVIKVEKAHDADLHCVDWNPL 334
GH D + F P A F SV D L LW++ P++ +E AH ++ C DW+
Sbjct: 165 GHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIE-AHASEALCCDWSHF 223
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA--AVLCVQWSPDKSSVFGSSA 392
D N+++TG +D +R +D R + ++ FE +S AV + SP ++V S+
Sbjct: 224 DRNVLVTGGSDGLIRGWDLRKMRTH-------VFELYSGEFAVRRLACSPHSAAVLASAN 276
Query: 393 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQ-HAGH 429
D IW+ E+ E R T + GL + H H
Sbjct: 277 YDFTTRIWNLERGESAQEVNARHTEFVCGLDWNPHRTH 314
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 233 ATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQ 292
AT + G S +++Q+ + N + DG S+G D + DV +CP +A
Sbjct: 29 ATSQLYGLAGGGSLFLLEQN---SNTNSSSTDGQSLGELCRLEW-SDGLFDVAWCPYAAD 84
Query: 293 EFCSVGDDSCLILWDARVGTS---------PVIKVEKAHDADLHCVDWNPL-DDNLILTG 342
+ D L +W G S P+I +++ H +++ +DW + + +L+G
Sbjct: 85 IAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQE-HKNEVYSLDWGEKWNYHTLLSG 143
Query: 343 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
S D +++++D S I F GH+ + ++SP +++F S + DG LN+W+
Sbjct: 144 SWDCTLKLWDCNRQNS------ITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWN 196
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 133 (51.9 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 43/167 (25%), Positives = 74/167 (44%)
Query: 41 DDKYTHWKSLVPVLYDWLANHNLVWPSLSCRW-GPQLEQATYKN--RQRLYLSEQTDGSV 97
++++ W+ P LY L H L WPSL+ + G + N ++ L T
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGDNSFKSKLNYFTNKVLLGTHTSNQD 97
Query: 98 PNTLVIAN--CEV--VKPRVAAAEHISQF--NEEARS----PFVKKHKTIIHPGEVNRIR 147
+ I C + +K V E+ S F N++ + P + ++HPGEV R
Sbjct: 98 LEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGEVIRAT 157
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGH 194
LP N+ + T T + + L++D P+ + + + P +IL GH
Sbjct: 158 NLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDM--STCYPQMILKGH 202
Score = 89 (36.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 56/246 (22%), Positives = 95/246 (38%)
Query: 200 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGN 259
F + T + S D S+ LW I T S P T G + +S K D N
Sbjct: 315 FGTEVNTTNLLLASCSVDGSICLWDINKG-TKSNDVPRTY------G--LNKSGKTADYN 365
Query: 260 DKAADG-PSVGPRGI-YNGHEDTV-EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 316
K + P++ P YN + T D+ F P + D+ + ++D R
Sbjct: 366 IKIYENTPTLSPLCTWYNKNTKTAFNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNF-FT 424
Query: 317 KVE---KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR-NLTSNGVGSPINKFEGHS 372
K E ++ ++ ++ + + G +D + ++D R N S + K + H+
Sbjct: 425 KAEICFNDYNEPMNTFSFDNFSEYIFSCGYSDGLISVWDMRYNKES------LLKLKYHT 478
Query: 373 AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG-------KKVEQGP-RTTN-YPAGLF 423
+ +++ S +F S ++DG IWD + +K E N P L
Sbjct: 479 QGINRIKFGMISSGIFASCSDDGTACIWDISRNNNTQILPLQKTEDDIYNNPNPVPKQLL 538
Query: 424 FQHAGH 429
F H GH
Sbjct: 539 FVHGGH 544
Score = 49 (22.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ GH ++ D+ + S+ +VG D+ + +W
Sbjct: 540 VHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVW 573
Score = 39 (18.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 5/31 (16%), Positives = 14/31 (45%)
Query: 370 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
GH ++ + W+ + + D +++W
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVW 573
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 133 (51.9 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 43/167 (25%), Positives = 74/167 (44%)
Query: 41 DDKYTHWKSLVPVLYDWLANHNLVWPSLSCRW-GPQLEQATYKN--RQRLYLSEQTDGSV 97
++++ W+ P LY L H L WPSL+ + G + N ++ L T
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGDNSFKSKLNYFTNKVLLGTHTSNQD 97
Query: 98 PNTLVIAN--CEV--VKPRVAAAEHISQF--NEEARS----PFVKKHKTIIHPGEVNRIR 147
+ I C + +K V E+ S F N++ + P + ++HPGEV R
Sbjct: 98 LEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGEVIRAT 157
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGH 194
LP N+ + T T + + L++D P+ + + + P +IL GH
Sbjct: 158 NLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDM--STCYPQMILKGH 202
Score = 89 (36.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 56/246 (22%), Positives = 95/246 (38%)
Query: 200 FALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGN 259
F + T + S D S+ LW I T S P T G + +S K D N
Sbjct: 315 FGTEVNTTNLLLASCSVDGSICLWDINKG-TKSNDVPRTY------G--LNKSGKTADYN 365
Query: 260 DKAADG-PSVGPRGI-YNGHEDTV-EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 316
K + P++ P YN + T D+ F P + D+ + ++D R
Sbjct: 366 IKIYENTPTLSPLCTWYNKNTKTAFNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNF-FT 424
Query: 317 KVE---KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR-NLTSNGVGSPINKFEGHS 372
K E ++ ++ ++ + + G +D + ++D R N S + K + H+
Sbjct: 425 KAEICFNDYNEPMNTFSFDNFSEYIFSCGYSDGLISVWDMRYNKES------LLKLKYHT 478
Query: 373 AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVG-------KKVEQGP-RTTN-YPAGLF 423
+ +++ S +F S ++DG IWD + +K E N P L
Sbjct: 479 QGINRIKFGMISSGIFASCSDDGTACIWDISRNNNTQILPLQKTEDDIYNNPNPVPKQLL 538
Query: 424 FQHAGH 429
F H GH
Sbjct: 539 FVHGGH 544
Score = 49 (22.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ GH ++ D+ + S+ +VG D+ + +W
Sbjct: 540 VHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVW 573
Score = 39 (18.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 5/31 (16%), Positives = 14/31 (45%)
Query: 370 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
GH ++ + W+ + + D +++W
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVW 573
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 161 (61.7 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 54/179 (30%), Positives = 81/179 (45%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD-ARVGTSPVIKVEKAHDADLHCVDW 331
+Y GH V DV P S F + D LW AR T P +++ H +D+ CV +
Sbjct: 391 LYRGHAYPVWDVDVSPCSLY-FSTASHDRTARLWSFAR--TYP-LRLYAGHLSDVDCVKF 446
Query: 332 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
+P + N I TGS D +VR++ R G+ + F GH VL + +SP+ S+
Sbjct: 447 HP-NSNYIATGSTDKTVRLWSTRQ------GASVRLFTGHRGPVLTLAFSPN-GKYLASA 498
Query: 392 AEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSSIKFVLRESCLVDNNHG 450
ED L +WD G + T + F Q + S+S+ +R + N HG
Sbjct: 499 GEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWD-IRNAHG 556
Score = 112 (44.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 60/252 (23%), Positives = 104/252 (41%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNA 198
H G V R L + +++ DS V WD+++ TN+ ++ GH
Sbjct: 353 HSGPVYRTAFLTDASGLLSCSEDST-VRYWDLKS---------FTNT---VLYRGHAYPV 399
Query: 199 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHI-----TSSATDPATAKSAGSSGSIIKQSP 253
+ + + P Y + D++ LWS +D K +S I S
Sbjct: 400 -WDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGST 458
Query: 254 KPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS 313
G SV ++ GH V + F P+ + S G+D L LWD G
Sbjct: 459 DKTVRLWSTRQGASVR---LFTGHRGPVLTLAFSPNG-KYLASAGEDQRLKLWDLASGG- 513
Query: 314 PVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL----TSNGVGSP-INKF 368
+ K + H + + ++ D +L+ + S DN+VR++D RN ++G S I ++
Sbjct: 514 -LFKDLRGHTDTISSLSFSQ-DSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQY 571
Query: 369 EGHSAAVLCVQW 380
G ++ +L VQ+
Sbjct: 572 TGSTSNILNVQF 583
Score = 111 (44.1 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAHDADLHC 328
P +Y GH V+ V F P+S + + G D + LW R G S +++ H +
Sbjct: 430 PLRLYAGHLSDVDCVKFHPNS--NYIATGSTDKTVRLWSTRQGAS--VRLFTGHRGPVLT 485
Query: 329 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 388
+ ++P L G D ++++D L S G+ GH+ + + +S D SS+
Sbjct: 486 LAFSPNGKYLASAGE-DQRLKLWD---LASGGL---FKDLRGHTDTISSLSFSQD-SSLV 537
Query: 389 GSSAEDGLLNIWD 401
S++ D + +WD
Sbjct: 538 ASASMDNTVRVWD 550
Score = 58 (25.5 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 89 LSEQTDGSVPNTLVIANCEVVKPRVAAA-EHISQFNEEARSPFVKKHKTIIHP 140
L+ QT+ S N + A C+ + + F +EA P VK+ +++ P
Sbjct: 45 LTVQTESSCANVVSAAPCQADPQQYENQFSRLRSFLQEAEGPLVKEASSVLFP 97
Score = 39 (18.8 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 7/35 (20%), Positives = 19/35 (54%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQ 173
H ++ E+ +++++A D+ V +W + A+
Sbjct: 278 HTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRAR 312
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 177 (67.4 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 49/155 (31%), Positives = 77/155 (49%)
Query: 265 GPSV-GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 323
G SV G R YN + D V DV + P F D + LWD R +SP++++ AHD
Sbjct: 231 GVSVCGSRDQYNSNSDAVRDVRWSPGDGVLFAVATDSGAIQLWDIRKSSSPILRIT-AHD 289
Query: 324 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP- 382
+ VDW+P D I++G D V++++ ++T+ P+ +F A VL V+W P
Sbjct: 290 RPCYSVDWHP-DGKHIVSGGTDRQVKVWEF-SITAERRQKPLFQFRTPQA-VLNVRWRPP 346
Query: 383 ------DKSSVFGSSA-------EDGLLNIWDYEK 404
D S + SS ED +++WD+ +
Sbjct: 347 SWSRESDSSGDWQSSQVVTSYDKEDPRVHLWDFRR 381
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 272 GIYNGHED--TVEDVTFCPSSAQEFCSVG-DDSCLILWDA-RVGTSPVIKVEKAHDADLH 327
G+ H+D TV+DV + + + + ++++D R G + + H +H
Sbjct: 140 GLSARHKDQLTVKDVKWSHGLYDQIIATAVANGRIVVYDLHRTGLE-YCRFQ-GHSRQVH 197
Query: 328 CVDWNPLDDNLILTGSADNSVRMFDRRNL-TSNGV---GSPINKFEGHSAAVLCVQWSPD 383
+ +NP +L+GS D +RM+D R + T GV GS +++ +S AV V+WSP
Sbjct: 198 RLAFNPHQPAWLLSGSQDAHIRMWDLRTVPTDRGVSVCGSR-DQYNSNSDAVRDVRWSPG 256
Query: 384 KSSVFGSSAEDGLLNIWDYEK 404
+F + + G + +WD K
Sbjct: 257 DGVLFAVATDSGAIQLWDIRK 277
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 174 (66.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 61/267 (22%), Positives = 106/267 (39%)
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPD-----LILTGHQDNAEFAL 202
+ + +I A + IW ++ + + N+ D L GH ++
Sbjct: 473 DFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTV-YST 531
Query: 203 AMCPTEPYVLSGGKDKSVVLWSIQDHIT----SSATDPATAKSAGSSGSIIKQSPKPGDG 258
+ P Y+LSG +DK+V LWS+ H P S G +
Sbjct: 532 SFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTA 591
Query: 259 NDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKV 318
+ D + P I+ GH + V+ V+F P+ F D +C +WD G S +++
Sbjct: 592 RLWSCD--HIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCR-MWDVSTGDS--VRL 646
Query: 319 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSA-AVLC 377
H A + + P D + TGS D + ++D G G + + GH A+
Sbjct: 647 FLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDI------GTGKRLKQMRGHGKNAIYS 699
Query: 378 VQWSPDKSSVFGSSAEDGLLNIWDYEK 404
+ +S + +V S D + +WD +K
Sbjct: 700 LSYSKE-GNVLISGGADHTVRVWDLKK 725
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
Y GH + D+ + S + CS DD L +WDAR +KV + H + CV++NP
Sbjct: 81 YEGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDAR-SPYECLKVLRGHTNFVFCVNFNP 138
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
NLI++GS D ++R+++ + G + + HS + V ++ D S + S++
Sbjct: 139 -PSNLIVSGSFDETIRIWEVKT------GKCVRMIKAHSMPISSVHFNRDGSLIV-SASH 190
Query: 394 DGLLNIWD 401
DG IWD
Sbjct: 191 DGSCKIWD 198
Score = 124 (48.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 52/221 (23%), Positives = 96/221 (43%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSS 245
+L GH N F + P ++SG D+++ +W ++ + + + P ++
Sbjct: 123 VLRGHT-NFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 246 GSIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSC 302
GS+I + DG+ K D G + + + V F P+ +F V DS
Sbjct: 182 GSLIVSASH--DGSCKIWDAKE-GTCLKTLIDDKSPAVSFAKFSPNG--KFILVATLDST 236
Query: 303 LILWDARVGTSPVIKVEKAHDADLHCVD--WNPLDDNLILTGSADNSVRMFDRRNLTSNG 360
L L + T +KV H + C+ ++ + I++GS DN V ++D L +
Sbjct: 237 LKL--SNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD---LQARN 291
Query: 361 VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ + + EGH+ AV+ V P ++ + S D + IW
Sbjct: 292 I---LQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 167 (63.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 39/128 (30%), Positives = 62/128 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
+ H + + P +A F SV D L +WD+R S + KAHD ++ DWN
Sbjct: 143 FREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS--LNTIKAHDHEILTCDWNK 200
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+D ++TGS D ++R++D R P GH+ AV ++ SP S+ S +
Sbjct: 201 YNDKEVVTGSVDKTIRIWDIRY-----PDRPTTILRGHTYAVRRIKCSPHSESMLASCSY 255
Query: 394 DGLLNIWD 401
D + +WD
Sbjct: 256 DMSVIVWD 263
Score = 141 (54.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 279 DTVEDVTFCPSSAQEFCSVGD---DSCLILWDARV--GTSPVIKVEKAHDADLHCVDWNP 333
DT + + C S + C V D + +WD + G P+ E+ H +++ VDWN
Sbjct: 56 DTRDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEE-HTKEVYSVDWNL 114
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ + +TGS D S+++++ R + + F H + WSP + +F S +
Sbjct: 115 VTKDTFITGSWDQSIKIWNPR------MDRSLKTFREHRYCIYSAIWSPRNAHLFASVSG 168
Query: 394 DGLLNIWD 401
D L IWD
Sbjct: 169 DRTLKIWD 176
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 256 GDGNDKAAD--GPSVG-PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
GDG+ K D PS G P + H V V + + F + D + +W+ R+
Sbjct: 79 GDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDR 138
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS 372
S +K + H ++ W+P + +L + S D +++++D R+ S +N + H
Sbjct: 139 S--LKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS------LNTIKAHD 190
Query: 373 AAVLCVQWSP--DKSSVFGSSAEDGLLNIWD 401
+L W+ DK V GS D + IWD
Sbjct: 191 HEILTCDWNKYNDKEVVTGSV--DKTIRIWD 219
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 16/74 (21%), Positives = 29/74 (39%)
Query: 151 QNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPY 210
+N VA+ + + IWD +A P+ RP H T+
Sbjct: 69 ENECHVASSSGDGSIKIWDTQA-PS--------GGRPIKSFEEHTKEVYSVDWNLVTKDT 119
Query: 211 VLSGGKDKSVVLWS 224
++G D+S+ +W+
Sbjct: 120 FITGSWDQSIKIWN 133
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 63/265 (23%), Positives = 109/265 (41%)
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPD---LILTGHQDNAEFALAM 204
E ++ +VA + +W ++ +P + +VL +P L GH + ++
Sbjct: 468 EFNDDSTLVAAGFQDSYIKLWSLDGKPLK-SVLKRDRHKPQENTRKLIGHSGPV-YGVSF 525
Query: 205 CPTEPYVLSGGKDKSVVLWSIQDHIT----SSATDPATAKSAGSSGSIIKQSPKPGDGND 260
P Y+LS +DK+V LWS+ + T P G +
Sbjct: 526 SPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARL 585
Query: 261 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK 320
A D + P I+ GH + V+ V F P+S F D +C +WD G ++V
Sbjct: 586 WATD--HIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCR-MWDVHTGNC--VRVFL 640
Query: 321 AHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVL-CVQ 379
H ++C+ +P D + +G D + ++D G G + GH+ A L +
Sbjct: 641 GHTNSVNCLAVSP-DGRWLASGGEDGIICVWDI------GSGRRLKSMRGHARASLYSLA 693
Query: 380 WSPDKSSVFGSSAEDGLLNIWDYEK 404
+S D +V S D + +WD +K
Sbjct: 694 FSRD-GTVLVSGCADNSVRVWDVKK 717
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 43/150 (28%), Positives = 69/150 (46%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-GTSPVIKVEKAHDADLHCVDWN 332
+ H V + P F S D L +WD R G++ +I AHD ++ DWN
Sbjct: 145 FKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP---AHDFEILSCDWN 201
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
DD ++ T S D +V+++D R+ P+ GH AV V++SP + S+ S +
Sbjct: 202 KYDDCILATSSVDKTVKVWDVRSYRV-----PLAVLNGHGYAVRKVKFSPHRRSLIASCS 256
Query: 393 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGL 422
D + +WDY V + T + G+
Sbjct: 257 YDMSVCLWDYMVEDALVGRYDHHTEFAVGI 286
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 37/129 (28%), Positives = 59/129 (45%)
Query: 279 DTVEDVTFCPS-SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN 337
D V DV + S + ++GD S I A S I+ + H ++ VD+NP +
Sbjct: 61 DAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRD 120
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
LT S D++V+++ S + F+ H+ V W+P VF S++ D L
Sbjct: 121 SFLTSSWDDTVKLWAMDRPAS------VRTFKEHAYCVYQAVWNPKHGDVFASASGDCTL 174
Query: 398 NIWDYEKVG 406
IWD + G
Sbjct: 175 RIWDVREPG 183
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 36/149 (24%), Positives = 63/149 (42%)
Query: 256 GDGNDKAADG---PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
GDG+ K D P P + H V+ V + P+ F + D + LW
Sbjct: 81 GDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA 140
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHS 372
S ++ K H ++ WNP ++ + S D ++R++D R S + P + FE
Sbjct: 141 S--VRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMI-IPAHDFE--- 194
Query: 373 AAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
+L W+ + +S+ D + +WD
Sbjct: 195 --ILSCDWNKYDDCILATSSVDKTVKVWD 221
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/221 (24%), Positives = 98/221 (44%)
Query: 182 ATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKS 241
+T +P +L GH+ + E A+A+ +SGG DK + +W+ TS+ + ++
Sbjct: 192 STFIKPTCVLRGHERSVE-AIAVNTDGTRTVSGGFDKMLKVWNTDKDDTSTVFEKTRSEK 250
Query: 242 AGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDS 301
G K D + P +GH+D + + P+SA+E +V D
Sbjct: 251 TGKK---------------KRTDIITKIPMVTLSGHKDAIVSAVWSPNSAKEVLTVSWDH 295
Query: 302 CLILWDARV-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNG 360
+ +WD + G + +KA + C +++TGS D VR++D R+
Sbjct: 296 TISIWDLELAGQINTLAAKKAFTSISVCCS-----SGMLITGSVDPVVRLWDPRSHEGTL 350
Query: 361 VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
V F GH + V W+ K ++F S++ D + +WD
Sbjct: 351 VKQ---SFIGHCGWISSVFWNKVKENLFISASFDKTVKMWD 388
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 284 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK-AHDADLHCVDWNPLDDNLILTG 342
++ C SS + D + LWD R ++K H + V WN + +NL ++
Sbjct: 320 ISVCCSSGM-LITGSVDPVVRLWDPRSHEGTLVKQSFIGHCGWISSVFWNKVKENLFISA 378
Query: 343 SADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
S D +V+M+D R SN +P+ GHS +LC WS ++ V G
Sbjct: 379 SFDKTVKMWDVR---SNK--TPLYDLVGHSDRILCCDWSVNELIVSG 420
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 60/192 (31%), Positives = 92/192 (47%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 395 GLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSSIKFVLRESCLVDNNHGL-SY 453
GL IWD G+ ++ N P F + SP+ K++L + +DN L Y
Sbjct: 193 GLCRIWDTAS-GQCLKTLIDDDNPPVS-FVKF---SPNG--KYIL--AATLDNTLKLWDY 243
Query: 454 ANKK-IKIY-CH 463
+ K +K Y CH
Sbjct: 244 SKGKCLKTYTCH 255
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 54/219 (24%), Positives = 95/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 125 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 184 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 239
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL + V
Sbjct: 240 LWDYSKGKC--LKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEV- 293
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 294 --VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 59/220 (26%), Positives = 89/220 (40%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD---HITSSATDPATAKSAGSSGS 247
L GH A ++ P ++ S DK + +W D T S + A SS S
Sbjct: 41 LAGHT-KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 248 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
+ S D K D S GH + V F P S D+S I WD
Sbjct: 100 NLLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI-WD 157
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
+ G +K AH + V +N D +LI++ S D R++D T++G
Sbjct: 158 VKTGKC--LKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD----TASGQCLK-TL 209
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 407
+ + V V++SP+ + ++ D L +WDY K GK
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDYSK-GK 247
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 159 (61.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVGTSPVIKVEKAHDADLHCVDWN 332
Y GH V D F P F S D +W R+ P +++ H +D+ CV W+
Sbjct: 456 YKGHNYPVWDAQFSPFG-HYFASCSHDRTARIWSMDRI--QP-LRIMAGHLSDVDCVQWH 511
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
P + N I TGS+D +VR++D + G + F GH + VL + SPD S
Sbjct: 512 P-NCNYIATGSSDKTVRLWDVQT------GECVRIFIGHRSMVLSLAMSPD-GRYMASGD 563
Query: 393 EDGLLNIWD 401
EDG + +WD
Sbjct: 564 EDGTIMMWD 572
Score = 57 (25.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 180 LGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWS 224
+G R +L GH ++ P +VLS D ++ LWS
Sbjct: 403 IGPNGRRSYTLLLGHSGPV-YSATFSPPGDFVLSSSADTTIRLWS 446
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 159 (61.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSP---VIKVEKAHDADLHCVDWN 332
GHE ++ D+ F + S G+D ++ W + K + + ++ +DW+
Sbjct: 202 GHESSIWDLAF-NKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWS 260
Query: 333 PLDDNLILTGSADNSVRMFDRRNL-TSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
L N I+TGSAD+S+ +++ + T + + K H + V C +W+P ++ S
Sbjct: 261 SLT-NTIVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASC 319
Query: 392 AEDGLLNIWDYE 403
+DG + IW+ +
Sbjct: 320 GDDGFIKIWELQ 331
Score = 44 (20.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 227
L GH + ++A T + + +DKS+ +W ++D
Sbjct: 111 LEGHTYEVK-SVAWDSTGTLLATCSRDKSIWIWQMED 146
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 83/333 (24%), Positives = 139/333 (41%)
Query: 107 EVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVL 166
++V+ + + + Q + +SP + K +H E N + P I D+L
Sbjct: 235 KIVEMDLEEEDMMHQNDPNNQSPKLLKEFRKLH--EPNA-EDAPSRDYIPLPPHKGVDIL 291
Query: 167 IWDVEAQPN--RHAVLGATNSRPDLIL-TGHQDNAEFALA-MCPTEPYVLSGGKDKSVVL 222
+VEA + + LG S P + + T H N A P + G ++ + L
Sbjct: 292 S-EVEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRL 350
Query: 223 WSIQDHITSSATDPATAKSAGS------SGSIIKQSPKPGD------GNDKAADGPSVGP 270
WSI+ S + S GS SG + + P + D +A SV
Sbjct: 351 WSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDT 410
Query: 271 RGI---YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 327
+ Y GH V DV F P F + D LW P ++V H +D+
Sbjct: 411 KTALVAYKGHTGPVWDVAFGPFG-HYFATASHDQTAQLWSCD-HIYP-LRVFAGHLSDVD 467
Query: 328 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 387
CV ++P + +LTGS+D + R++D G + F GH+ V V +PD ++
Sbjct: 468 CVTFHP-NSAYVLTGSSDKTCRLWDVHR------GHSVRVFNGHTQPVTAVAIAPDGHTM 520
Query: 388 FGSSAEDGLLNIWDYEKVGKKVE--QGPRTTNY 418
+ +E GL+++WD G++++ +G R Y
Sbjct: 521 ASADSE-GLIHLWDIG-TGRRIKTMRGHRGNIY 551
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 60/260 (23%), Positives = 100/260 (38%)
Query: 150 PQNTKIVATHTDSPDVLIWDVEA-QPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTE 208
P +T I +S + +W ++A + + +S + L H + P
Sbjct: 334 PDSTMIACGFQESY-IRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPV-YGTTFSPDN 391
Query: 209 PYVLSGGKDKSVVLWSIQDHITSSA----TDPATAKSAGSSGSIIKQSPKPGDGNDKAAD 264
Y+LS +D S LWS+ A T P + G G + + D
Sbjct: 392 KYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD 451
Query: 265 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
+ P ++ GH V+ VTF P+SA D +C LWD G S ++V H
Sbjct: 452 --HIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCR-LWDVHRGHS--VRVFNGHTQ 506
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
+ V P D + + + ++ + ++D G G I GH + + +S +
Sbjct: 507 PVTAVAIAP-DGHTMASADSEGLIHLWDI------GTGRRIKTMRGHRGNIYSLSFSRE- 558
Query: 385 SSVFGSSAEDGLLNIWDYEK 404
S+V S D + WD K
Sbjct: 559 STVLVSGGSDCTVRAWDVFK 578
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 44/151 (29%), Positives = 69/151 (45%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS---PVIKVEKAHDADL 326
P ++ GH + D++ F SV DDS D RV + PVI VE +H +
Sbjct: 247 PLQLFKGHHGAINDISSIKEK-HLFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQN- 304
Query: 327 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 386
C+ ++P L TG DN V ++D RN ++ P KF GH+ +V +QW +
Sbjct: 305 -CIQFHPDIQTLYATGGKDNVVSLYDIRNYST-----PFRKFYGHNDSVRQLQWDWNNPD 358
Query: 387 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 417
+ S D + WD + + + T+N
Sbjct: 359 ILVSCGLDKRIIFWDLKNLDEDFTYPDATSN 389
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 82/405 (20%), Positives = 154/405 (38%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN 99
V++++ WK VP+LYD++ L PSL +W P + + + N
Sbjct: 72 VNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTTSVSQSDLELKFLIGTNAINKSEN 131
Query: 100 TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATH 159
L + + + V A + I ++ + K E+N+++ P + V
Sbjct: 132 YLKLTSISLPSTLVGATDSIPVPSDGIDTSNFKVVTQWKQTQEINKLKVSPNGSLAVGFS 191
Query: 160 TDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKS 219
D + ++++ N +V + + + L DN F LSG D
Sbjct: 192 ADGV-IRSYNLD---NFDSVDYKYHKQGGIALDW-VDNNGF-----------LSGSNDAQ 235
Query: 220 VVLWSIQDHIT---------SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 270
+ LW + T + D ++ K GS+ S +D + + P
Sbjct: 236 IALWQVDKSSTPLQLFKGHHGAINDISSIKEKHLFGSVSDDSTT--QFHDTRVNATDINP 293
Query: 271 R-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
+ N H + F P + + G D+ + L+D R ++P K H+ + +
Sbjct: 294 VITVENSHIQNC--IQFHPDIQTLYATGGKDNVVSLYDIRNYSTPFRKFY-GHNDSVRQL 350
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNL---------TSNGVGS-----------PINKFE 369
W+ + +++++ D + +D +NL TSNG + P K+
Sbjct: 351 QWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSNGKDTNSKRKQAVKTDPCLKYV 410
Query: 370 --GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV-GKKVEQ 411
GH+ P ++FGS +D LL IW + + G + EQ
Sbjct: 411 HGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQ 455
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 44/151 (29%), Positives = 69/151 (45%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTS---PVIKVEKAHDADL 326
P ++ GH + D++ F SV DDS D RV + PVI VE +H +
Sbjct: 247 PLQLFKGHHGAINDISSIKEK-HLFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQN- 304
Query: 327 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 386
C+ ++P L TG DN V ++D RN ++ P KF GH+ +V +QW +
Sbjct: 305 -CIQFHPDIQTLYATGGKDNVVSLYDIRNYST-----PFRKFYGHNDSVRQLQWDWNNPD 358
Query: 387 VFGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 417
+ S D + WD + + + T+N
Sbjct: 359 ILVSCGLDKRIIFWDLKNLDEDFTYPDATSN 389
Score = 126 (49.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 82/405 (20%), Positives = 154/405 (38%)
Query: 40 VDDKYTHWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN 99
V++++ WK VP+LYD++ L PSL +W P + + + N
Sbjct: 72 VNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTTSVSQSDLELKFLIGTNAINKSEN 131
Query: 100 TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATH 159
L + + + V A + I ++ + K E+N+++ P + V
Sbjct: 132 YLKLTSISLPSTLVGATDSIPVPSDGIDTSNFKVVTQWKQTQEINKLKVSPNGSLAVGFS 191
Query: 160 TDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKS 219
D + ++++ N +V + + + L DN F LSG D
Sbjct: 192 ADGV-IRSYNLD---NFDSVDYKYHKQGGIALDW-VDNNGF-----------LSGSNDAQ 235
Query: 220 VVLWSIQDHIT---------SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 270
+ LW + T + D ++ K GS+ S +D + + P
Sbjct: 236 IALWQVDKSSTPLQLFKGHHGAINDISSIKEKHLFGSVSDDSTT--QFHDTRVNATDINP 293
Query: 271 R-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
+ N H + F P + + G D+ + L+D R ++P K H+ + +
Sbjct: 294 VITVENSHIQNC--IQFHPDIQTLYATGGKDNVVSLYDIRNYSTPFRKFY-GHNDSVRQL 350
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNL---------TSNGVGS-----------PINKFE 369
W+ + +++++ D + +D +NL TSNG + P K+
Sbjct: 351 QWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSNGKDTNSKRKQAVKTDPCLKYV 410
Query: 370 --GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV-GKKVEQ 411
GH+ P ++FGS +D LL IW + + G + EQ
Sbjct: 411 HGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQ 455
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 146 (56.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 341 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 397
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 398 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 449
Query: 394 DGLLNIWD 401
DG + +WD
Sbjct: 450 DGRVLLWD 457
Score = 102 (41.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 210 YVLSGGKDKSVVLWSIQDH------ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 263
Y +SGG D+ LW+ DH D + +S + S D +
Sbjct: 359 YFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVNCTRFHPNSNYVATGS---ADRTVRLW 414
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKAH 322
D + I+ GH+ + +TF P+ F + G D ++LWD +G ++ K H
Sbjct: 415 DVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWD--IGHGLMVGELKGH 470
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D C D ++ +GS DN+VR++D
Sbjct: 471 -TDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 65 (27.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ + IL GH + + P Y+LS +D +V LW
Sbjct: 272 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLW 330
Query: 224 SIQ 226
S+Q
Sbjct: 331 SLQ 333
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 170 VEAQPNRHAVLGATNSRPD 188
VE QP+ AVL A N + D
Sbjct: 4 VEDQPDVSAVLSAYNQQGD 22
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 150 (57.9 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 279
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 399 IWDYEKVGKKVEQGPRTT 416
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 159 (61.0 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 58 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 113
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 114 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 166
Query: 395 GLLNIWD 401
GL IWD
Sbjct: 167 GLCRIWD 173
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 53/219 (24%), Positives = 95/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 99 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 157
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 158 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 213
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL + +
Sbjct: 214 LWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEI- 267
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 268 --VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 175 (66.7 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 57/195 (29%), Positives = 94/195 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEK--AHDADLHCVDW 331
++ +++ DV F PS A +F + D+ + LWD R P I VEK +H + +DW
Sbjct: 157 FSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIR---KPTIAVEKITSHQGLVLTIDW 213
Query: 332 NPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-DKSSVFG- 389
+P + N+I +G D ++R++D N G +N S+ V ++W P +K +
Sbjct: 214 HPEEKNIIASGGRDRAIRVWDFSN------GKSLNNVSTISS-VSRIKWRPGNKWHIASC 266
Query: 390 SSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSSIKFVLRESCLVDNNH 449
SS D ++IWD +K + + P GL ++ SPSS I SC D++
Sbjct: 267 SSIVDFQIHIWDVKKPYIPLFSFTDHRDVPTGLIWK----SPSSLI------SCSKDSHL 316
Query: 450 GLSYANKKIKIYCHL 464
L+ K Y H+
Sbjct: 317 LLNEFQDSYKPYQHI 331
Score = 143 (55.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 38/137 (27%), Positives = 74/137 (54%)
Query: 280 TVEDVTFCPSSAQEF----CSVGDDSCLILWDA-RVGTSPVIKVEKAHDADLHCVDWNPL 334
T D + PS + + + + +++W+ R G+ V +V H ++ + W+P
Sbjct: 68 TGNDCCWHPSLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPE 127
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
+ ILTGS DN++RM+D R+ ++N S I F S ++ VQ++P +++ F ++ ++
Sbjct: 128 KLDCILTGSQDNTLRMWDIRD-SANA--SKIT-FSPKSESIRDVQFNPSQANQFAAAFDN 183
Query: 395 GLLNIWDYEKVGKKVEQ 411
G + +WD K VE+
Sbjct: 184 GTIQLWDIRKPTIAVEK 200
Score = 39 (18.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 463 HLEALKSFQIKKNFIFC 479
HLE +KS+ I KN C
Sbjct: 994 HLEHMKSWFIDKNQKSC 1010
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 159 (61.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 395 GLLNIWD 401
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/219 (24%), Positives = 95/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 125 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 184 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 239
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL + +
Sbjct: 240 LWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEI- 293
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 294 --VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 159 (61.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 395 GLLNIWD 401
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/219 (24%), Positives = 95/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 125 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 184 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 239
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL + +
Sbjct: 240 LWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEI- 293
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 294 --VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 159 (61.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 395 GLLNIWD 401
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/219 (24%), Positives = 95/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 125 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 184 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 239
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL + +
Sbjct: 240 LWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEI- 293
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 294 --VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 159 (61.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 395 GLLNIWD 401
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/219 (24%), Positives = 95/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 125 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 184 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 239
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL + +
Sbjct: 240 LWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEI- 293
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 294 --VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 159 (61.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S + S DD L +WD V + +K K H + C ++NP
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWD--VSSGKCLKTLKGHSNYVFCCNFNP- 139
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D + G + HS V V ++ D S + SS+ D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 192
Query: 395 GLLNIWD 401
GL IWD
Sbjct: 193 GLCRIWD 199
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/219 (24%), Positives = 95/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 125 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 183
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 184 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 239
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL + +
Sbjct: 240 LWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEI- 293
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ V+ P ++ + ++ E D + +W
Sbjct: 294 --VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 147 (56.8 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 582 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRYHP 638
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 639 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 690
Query: 394 DGLLNIWD 401
DG + +WD
Sbjct: 691 DGRVLLWD 698
Score = 102 (41.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 210 YVLSGGKDKSVVLWSIQDH------ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 263
Y +SGG D+ LW+ DH D + +S + S D +
Sbjct: 600 YFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVNCTRYHPNSNYVATGS---ADRTVRLW 655
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKAH 322
D + I+ GH+ + +TF P+ F + G D ++LWD +G ++ K H
Sbjct: 656 DVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWD--IGHGLMVGELKGH 711
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D C D ++ +GS DN+VR++D
Sbjct: 712 -TDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 65 (27.9 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ + IL GH + + P Y+LS +D +V LW
Sbjct: 513 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLW 571
Query: 224 SIQ 226
S+Q
Sbjct: 572 SLQ 574
Score = 41 (19.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 170 VEAQPNRHAVLGATNSRPD 188
VE QP+ AVL A N + D
Sbjct: 193 VEDQPDVSAVLSAYNQQGD 211
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/127 (34%), Positives = 65/127 (51%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ + DV + S ++ S DD L +W+ G S +K K H + C ++NP
Sbjct: 111 SGHKLGISDVAWS-SDSRLLVSGSDDKTLKVWELSTGKS--LKTLKGHSNYVFCCNFNP- 166
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
NLI++GS D SVR++D R G + HS V V ++ D S + SS+ D
Sbjct: 167 QSNLIVSGSFDESVRIWDVRT------GKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYD 219
Query: 395 GLLNIWD 401
GL IWD
Sbjct: 220 GLCRIWD 226
Score = 146 (56.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 57/219 (26%), Positives = 96/219 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH N F P ++SG D+SV +W ++ + +DP +A G
Sbjct: 152 LKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 210
Query: 247 SIIKQSPKPGDGNDKAADGPSVGP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S+I S DG + D S G + + + V V F P+ + D++ L
Sbjct: 211 SLIVSSSY--DGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LK 266
Query: 305 LWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD G +K H + +C+ +++ I++GS DN V ++ NL S V
Sbjct: 267 LWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW---NLQSKEV- 320
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ K +GH+ VLC P ++ + ++ E D + +W
Sbjct: 321 --VQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 152 (58.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-RVGTSPV-----IKVEKAHDADLHCV 329
GHE TV ++F SS + F S GDD L +W + G S V + H+ ++ V
Sbjct: 177 GHESTVWSLSF-HSSGELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDV 235
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLT---SNGVGSPINKFEGHSAAVLCVQWSPDKSS 386
DW+ L+ N I T D+++R+F +T SN + I ++ H+ V V+W P +
Sbjct: 236 DWSKLN-NKIATACGDDAIRIFSIVRITISISNQLLF-IAYYQAHNHDVNVVRWHPKVDN 293
Query: 387 VFGSSAEDGLLNIW 400
+ S ++D + IW
Sbjct: 294 ILASGSDDNCIKIW 307
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 190 ILT-GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 227
ILT GH ++A P Y+ S D ++ +WS +D
Sbjct: 39 ILTEGHTRTIR-SVAWSPCGNYLASCSFDATICIWSKKD 76
Score = 42 (19.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 72 WGPQ---LEQATYKNRQRLYLSEQTDGSVPNTLV 102
W P+ L A+Y N ++Y D +TL+
Sbjct: 143 WSPKENALVSASYDNTIKIYKEVDDDWECSHTLI 176
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 146 (56.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 579 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 635
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 636 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 687
Query: 394 DGLLNIWD 401
DG + +WD
Sbjct: 688 DGRVLLWD 695
Score = 102 (41.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 210 YVLSGGKDKSVVLWSIQDH------ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 263
Y +SGG D+ LW+ DH D + +S + S D +
Sbjct: 597 YFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVNCTRFHPNSNYVATGS---ADRTVRLW 652
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKAH 322
D + I+ GH+ + +TF P+ F + G D ++LWD +G ++ K H
Sbjct: 653 DVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWD--IGHGLMVGELKGH 708
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D C D ++ +GS DN+VR++D
Sbjct: 709 -TDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 65 (27.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ + IL GH + + P Y+LS +D +V LW
Sbjct: 510 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLW 568
Query: 224 SIQ 226
S+Q
Sbjct: 569 SLQ 571
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 236 PATAKSAGS-SGSIIKQSPKPGDGNDKAADGPSVG-PRGI 273
P AG SG P G GN AA G G P+ +
Sbjct: 26 PQAGDGAGEGSGGTPNNGPNGGGGNVAAAAGGDGGTPKPV 65
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 170 VEAQPNRHAVLGATNSRPD 188
VE QP+ AVL A N + D
Sbjct: 190 VEDQPDVSAVLSAYNQQGD 208
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 146 (56.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 581 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 637
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 638 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 689
Query: 394 DGLLNIWD 401
DG + +WD
Sbjct: 690 DGRVLLWD 697
Score = 102 (41.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 210 YVLSGGKDKSVVLWSIQDH------ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 263
Y +SGG D+ LW+ DH D + +S + S D +
Sbjct: 599 YFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVNCTRFHPNSNYVATGS---ADRTVRLW 654
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKAH 322
D + I+ GH+ + +TF P+ F + G D ++LWD +G ++ K H
Sbjct: 655 DVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWD--IGHGLMVGELKGH 710
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D C D ++ +GS DN+VR++D
Sbjct: 711 -TDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 65 (27.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ + IL GH + + P Y+LS +D +V LW
Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLW 570
Query: 224 SIQ 226
S+Q
Sbjct: 571 SLQ 573
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 170 VEAQPNRHAVLGATNSRPD 188
VE QP+ AVL A N + D
Sbjct: 192 VEDQPDVSAVLSAYNQQGD 210
Score = 37 (18.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 224 SIQDHITSSATDPATAK--SAGSSGSII----KQSPK-PGD-GNDKAADGPSVGP-RGIY 274
++ +T+SA PA G+SG+ + P PG G+ D P V Y
Sbjct: 146 ALLSRVTASAPGPAAPDPPGTGASGATVVSGSASGPAAPGKVGSVAVEDQPDVSAVLSAY 205
Query: 275 NGHED 279
N D
Sbjct: 206 NQQGD 210
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 146 (56.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
Y GH V D F P F S G D LW A P +++ H AD++C ++P
Sbjct: 582 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVNCTRFHP 638
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ N + TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 639 -NSNYVATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLTFSPN-GRFLATGAT 690
Query: 394 DGLLNIWD 401
DG + +WD
Sbjct: 691 DGRVLLWD 698
Score = 102 (41.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 210 YVLSGGKDKSVVLWSIQDH------ITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 263
Y +SGG D+ LW+ DH D + +S + S D +
Sbjct: 600 YFVSGGHDRVARLWAT-DHYQPLRIFAGHLADVNCTRFHPNSNYVATGS---ADRTVRLW 655
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWDARVGTSPVIKVEKAH 322
D + I+ GH+ + +TF P+ F + G D ++LWD +G ++ K H
Sbjct: 656 DVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWD--IGHGLMVGELKGH 711
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D C D ++ +GS DN+VR++D
Sbjct: 712 -TDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 65 (27.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ + IL GH + + P Y+LS +D +V LW
Sbjct: 513 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLW 571
Query: 224 SIQ 226
S+Q
Sbjct: 572 SLQ 574
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 170 VEAQPNRHAVLGATNSRPD 188
VE QP+ AVL A N + D
Sbjct: 193 VEDQPDVSAVLSAYNQQGD 211
Score = 40 (19.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 224 SIQDHITSSATDPATAK--SAGSSGS-----IIKQSPKPGD-GNDKAADGPSVGP-RGIY 274
++ +T+SA PA G+SG+ + P PG G+ D P V Y
Sbjct: 147 ALLSRVTASAPGPAAPDPPGTGASGAPAVSGLATGPPAPGKVGSVAVEDQPDVSAVLSAY 206
Query: 275 NGHED 279
N D
Sbjct: 207 NQQGD 211
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 157 (60.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 57/216 (26%), Positives = 88/216 (40%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L+GH A + ++ S DK++ +W +D HI S S+
Sbjct: 265 LSGH--TAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSL-STE 321
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFC-PSSAQEFCSVGDDSCLIL 305
+++ A D P+ + E C S + S DD LIL
Sbjct: 322 HVLRSG---------AYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLIL 372
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD + T P+ K+ H ++ ++P D I T S D+SVR++D + G +
Sbjct: 373 WDPQKSTKPITKMH-GHQKVVNHASFSP-DGRCIATASFDSSVRLWDGKT------GKFL 424
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
GH AAV WS D S + SS++D L +WD
Sbjct: 425 ATLRGHVAAVYQCAWSTD-SRLLVSSSQDTTLKVWD 459
Score = 155 (59.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
NGH+ T+ F PS++ + D LWD T P+ + K H + CV W P
Sbjct: 131 NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQT-PIATM-KGHTNWVSCVAWAP- 187
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAAVLCVQW-----SPDKSS-V 387
D ++I TGS DN++R +D + GSPI + H+ ++ + W +PD +
Sbjct: 188 DASIIATGSMDNTIRFWDPKK------GSPIGDALRRHTKPIMALCWQPLHLAPDSGPYL 241
Query: 388 FGSSAEDGLLNIWD 401
S ++D + IW+
Sbjct: 242 LASGSKDNTVRIWN 255
Score = 124 (48.7 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 36/130 (27%), Positives = 59/130 (45%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+ V +F P + + DS + LWD + G + + H A ++ W+
Sbjct: 386 HGHQKVVNHASFSPDG-RCIATASFDSSVRLWDGKTGK--FLATLRGHVAAVYQCAWST- 441
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFE--GHSAAVLCVQWSPDKSSVFGSSA 392
D L+++ S D +++++D R S KF+ GH V V WSPD V S
Sbjct: 442 DSRLLVSSSQDTTLKVWDVR--------SKKMKFDLPGHEDQVFAVDWSPDGQRV-ASGG 492
Query: 393 EDGLLNIWDY 402
D + IW +
Sbjct: 493 ADKAVRIWSH 502
Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
HD + ++P + ++TGS D + R++D T PI +GH+ V CV W+
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQT------PIATMKGHTNWVSCVAWA 186
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAGHSPSS 433
PD +S+ + + D + WD +K G + R P L +Q +P S
Sbjct: 187 PD-ASIIATGSMDNTIRFWDPKK-GSPIGDALRRHTKPIMALCWQPLHLAPDS 237
Score = 45 (20.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 17/67 (25%), Positives = 26/67 (38%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNS------RPD--LI 190
H G + + P + + T + +WD + Q + G TN PD +I
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASII 192
Query: 191 LTGHQDN 197
TG DN
Sbjct: 193 ATGSMDN 199
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 135 (52.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV-------GTSP---VIKVEKAHDA 324
NGH TV ++F ++ + + DD + +W + G P V + HD
Sbjct: 186 NGHSSTVWSISF-NAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDR 244
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP-----INKFEGHSAAVLCVQ 379
++ V W+ D +I +G+ D+++++F + S+ V P + K + H V VQ
Sbjct: 245 TIYSVHWSR--DGVIASGAGDDTIQLFVDSD--SDSVDGPSYKLLVKKEKAHEMDVNSVQ 300
Query: 380 WSPDKSS-VFGSSAEDGLLNIW 400
W+PDK S + S+++D ++ IW
Sbjct: 301 WAPDKESRLLASASDDKMVKIW 322
Score = 61 (26.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 182 ATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ 226
AT+S +L GH+ + +++ + + + G+DKSV +W IQ
Sbjct: 79 ATDSESVSVLRGHESEVK-SVSWNASGSLLATCGRDKSVWIWEIQ 122
Score = 60 (26.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 19/87 (21%), Positives = 33/87 (37%)
Query: 141 GEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEF 200
G + ++ + N T D +W E QP +LTGH ++ +
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTI-----AVLTGHSEDVKM 144
Query: 201 ALAMCPTEPYVLSGGKDKSVVLWSIQD 227
L PT + S D ++ +W +D
Sbjct: 145 VL-WHPTMDVLFSCSYDNTIKIWCSED 170
Score = 40 (19.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 72 WGPQLE---QATYKNRQRLYLSEQTDG 95
W P ++ +Y N +++ SE DG
Sbjct: 147 WHPTMDVLFSCSYDNTIKIWCSEDEDG 173
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 144 (55.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
GH VE V ++ +E G S I +WD + +++ H A++ +D++P
Sbjct: 65 GHTSPVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPY 120
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
+ + +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D
Sbjct: 121 GE-FVASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADD 172
Query: 395 GLLNIWDYEKVGKKVEQGPRTT 416
+ +WD GK + + P T
Sbjct: 173 HTVKLWDLT-AGKMMSEFPGHT 193
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 144 (55.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 42/128 (32%), Positives = 61/128 (47%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP 333
Y GH V D F P F S G D LW A P +++ H AD+ C ++P
Sbjct: 561 YKGHNYPVWDTQFSPYGYY-FVSGGHDRVARLW-ATDHYQP-LRIFAGHLADVTCTRFHP 617
Query: 334 LDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE 393
+ N I TGSAD +VR++D N G+ + F GH + + +SP+ + A
Sbjct: 618 -NSNYIATGSADRTVRLWDVLN------GNCVRIFTGHKGPIHSLAFSPN-GRFLATGAT 669
Query: 394 DGLLNIWD 401
DG + +WD
Sbjct: 670 DGRVLLWD 677
Score = 62 (26.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ + IL GH + + P Y+LS +D +V LW
Sbjct: 492 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPV-YGTSFSPDRNYLLSCSEDGTVRLW 550
Query: 224 SIQ 226
S+Q
Sbjct: 551 SLQ 553
Score = 41 (19.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 170 VEAQPNRHAVLGATNSRPD 188
VE QP+ AVL A N + D
Sbjct: 172 VEDQPDVSAVLSAYNQQGD 190
Score = 40 (19.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 230 TSSATDPATAKSAGSSGSIIKQSPKP 255
+++A + TA SAG + S +P P
Sbjct: 40 SAAAAEGETAGSAGDASSAKPSAPGP 65
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 69/295 (23%), Positives = 121/295 (41%)
Query: 133 KHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILT 192
K + + VN +R+ + ++ TD V + AQ GAT+ L
Sbjct: 7 KERHAVATETVNNLRDQLRQRRLQLLDTD---VARYSA-AQGRTRVSFGATDLVCCRTLQ 62
Query: 193 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLW----SIQDH--------ITSSATDP-ATA 239
GH ++L P ++S +D +++W S + H + + A P +
Sbjct: 63 GHTGKV-YSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQS 121
Query: 240 KSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSS-AQEFCSVG 298
+ G S+ DK DG +V + GH V + P+ A S G
Sbjct: 122 VACGGLDSVCSIFSLSSTA-DK--DG-TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177
Query: 299 DDSCLILWDARVGTSPVI---KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 355
D +C ILWD G + + + H AD+ V + + N ++GS D++ R++D R
Sbjct: 178 DQTC-ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTR- 235
Query: 356 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 410
+ F GH V V++ PD FG+ ++DG ++D + G +++
Sbjct: 236 ----AASRAVRTFHGHEGDVNTVKFFPDGYR-FGTGSDDGTCRLYDI-RTGHQLQ 284
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 65/279 (23%), Positives = 101/279 (36%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDL-ILTGHQDN 197
H G+V + P+ +IV+ D +++W+ HA+ P ++T
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGR-LIVWNALTSQKTHAI-----KLPCAWVMT----- 112
Query: 198 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSG--SIIKQSPKP 255
A P V GG D ++S+ T P + G G S + P
Sbjct: 113 ----CAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNE 168
Query: 256 --------GDGNDKAAD---GPSVGPRG--IYNGHEDTVEDVTFCPSSAQEFCSVGDDSC 302
GD D G G +GH V V+ S+ F S DS
Sbjct: 169 DAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDST 228
Query: 303 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
LWD R S ++ H+ D++ V + P D TGS D + R++D R V
Sbjct: 229 ARLWDTRAA-SRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDGTCRLYDIRTGHQLQVY 286
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
P +G + V + +S +F A + +WD
Sbjct: 287 QPHG--DGENGPVTSIAFSVSGRLLFAGYASNNTCYVWD 323
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 151 (58.2 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 61/227 (26%), Positives = 101/227 (44%)
Query: 193 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQS 252
GH + ++++ P V+SG +DK++ +W+I + + TD + S ++ S
Sbjct: 103 GHTSDV-LSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWV----SCVRFS 157
Query: 253 PKPGD------GNDKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFC-SVGDDSC 302
P P + G DKA D + R + GH V VT P + C S G D
Sbjct: 158 PNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGS--LCASGGRDGT 215
Query: 303 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVG 362
L+LWD T + +E A+++ + ++P + L + +S+R+FD T V
Sbjct: 216 LMLWDLNESTH-LYSLEAK--ANINALVFSP--NRYWLCAATGSSIRIFDLE--TQEKVD 268
Query: 363 SPINKFEG---HSAAVLCVQ--WSPDKSSVFGSSAEDGLLNIWDYEK 404
F G S+ C+ WSPD ++F S D L+ +W K
Sbjct: 269 ELTVDFVGVGKKSSEPECISLTWSPDGQTLF-SGWTDNLIRVWQVTK 314
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 57/220 (25%), Positives = 89/220 (40%)
Query: 191 LTGHQDNAEFALAMCPTEPYVL-SGGKDKSVVLWS-IQDHITSS-ATDPATAKSAGSSGS 247
L GH +L+ P P +L SG +DKS++LW+ ++D + A T S S
Sbjct: 11 LEGHSGWVT-SLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC 69
Query: 248 IIK-QSPKPGDGN-DKAA---DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC 302
+ S + DK D + GH V V+ P + Q S D
Sbjct: 70 ALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQ-VVSGSRDKT 128
Query: 303 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSNGV 361
+ +W+ +G + H + CV ++P DNL + D +V+++D +
Sbjct: 129 IKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLR-- 185
Query: 362 GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
GH+ V V SPD S+ S DG L +WD
Sbjct: 186 ----TSHYGHTGYVSAVTISPD-GSLCASGGRDGTLMLWD 220
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 45/129 (34%), Positives = 61/129 (47%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH D V +F P S D S LWD G ++ E H + + D
Sbjct: 385 GHSDVVNRCSFHPCGRYITTSSNDKSWR-LWDLESGGKCLLDQE-GHSDGVMGISIQS-D 441
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
+L+ TGS D VR++D R+ G PI F+GHS V+ V WSP+ + SS+ED
Sbjct: 442 GSLLATGSQDGLVRIWDLRS------GRPILYFQGHSKQVISVDWSPNGYQL-ASSSEDN 494
Query: 396 LLNIWDYEK 404
+ IWD K
Sbjct: 495 TVVIWDIRK 503
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 62/245 (25%), Positives = 98/245 (40%)
Query: 169 DVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH 228
D E + N V + ++P L L GH D + P Y+ + DKS LW ++
Sbjct: 363 DNEEEDNDATV--SIETQPILSLEGHSDVVN-RCSFHPCGRYITTSSNDKSWRLWDLESG 419
Query: 229 ----ITSSA-TDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVED 283
+ +D S S GS++ + DG + D S P + GH V
Sbjct: 420 GKCLLDQEGHSDGVMGISIQSDGSLLATGSQ--DGLVRIWDLRSGRPILYFQGHSKQVIS 477
Query: 284 VTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNP--LDDNLILT 341
V + P+ Q S +D+ +++WD R + AH++ + CV + N
Sbjct: 478 VDWSPNGYQ-LASSSEDNTVVIWDIRKKEQSCQIL--AHNSIVSCVKFQKQSTQTNNNNN 534
Query: 342 GSADNSVRM-----FDRRNLT-SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
S+ V FD + T S SP+ FEGHS+ V + + S + +S D
Sbjct: 535 NSSPGCVNYLATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDLT--NSKILSTSF-DK 591
Query: 396 LLNIW 400
IW
Sbjct: 592 TWKIW 596
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 150 (57.9 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 40/126 (31%), Positives = 62/126 (49%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH + DV + S++ S DD L +WD R G +K K H + C D+NP
Sbjct: 79 GHSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGKC--LKTLKGHSDFVFCCDFNP-P 134
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
NLI++GS D SV++++ + G + HS + V ++ + S + S + DG
Sbjct: 135 SNLIVSGSFDESVKIWEVKT------GKCLKTLSAHSDPISAVNFNCNGSLIV-SGSYDG 187
Query: 396 LLNIWD 401
L IWD
Sbjct: 188 LCRIWD 193
Score = 132 (51.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 52/218 (23%), Positives = 95/218 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSG 246
L GH D F P ++SG D+SV +W ++ S+ +DP +A + +G
Sbjct: 119 LKGHSDFV-FCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNG 177
Query: 247 SIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
S+I G AA G + R + + V V F P+ + D++ L L
Sbjct: 178 SLIVSGSYDGLCRIWDAASGQCL--RTLADEGNPPVSFVKFSPNGKYILTATLDNT-LKL 234
Query: 306 WDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 363
WD G +K H + +C+ ++ +++GS DN V ++ NL + +
Sbjct: 235 WDYSRGRC--LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW---NLQTKEI-- 287
Query: 364 PINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ + +GH+ V+ P K+ + ++ E D + +W
Sbjct: 288 -VQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 266 PSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDAD 325
P+ R GH + V F P+ + S D+ +I+W A G K H +
Sbjct: 27 PNYALRLTLAGHSAAISSVKFSPNG-EWLASSAADALIIIWGAYDGNCK--KTLYGHSLE 83
Query: 326 LHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKS 385
+ V W+ D + +++ S D +++++D R+ G + +GHS V C ++P +
Sbjct: 84 ISDVAWSS-DSSRLVSASDDKTLKVWDMRS------GKCLKTLKGHSDFVFCCDFNPPSN 136
Query: 386 SVFGSSAEDGLLNIWDYEKVGK 407
+ S ++ + IW+ K GK
Sbjct: 137 LIVSGSFDESV-KIWEV-KTGK 156
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 152 (58.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH + V V + S E CS D + +WD GT +K A + +C+ ++PL
Sbjct: 254 SGHSEAVSSVLW--SDVDEICSASWDHNIKIWDVETGT---VKSTLAGNKVFNCISYSPL 308
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
L +GS D +R++D R+ + V + H+ V V+WSP S + D
Sbjct: 309 SQRLA-SGSTDRHIRLWDPRSKDGSLV---LCSLTSHTGWVTSVKWSPSHEQQLVSGSLD 364
Query: 395 GLLNIWD 401
L+ +WD
Sbjct: 365 KLVKLWD 371
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 151 (58.2 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 56/236 (23%), Positives = 105/236 (44%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATD------P--ATAKSA 242
L GH ++L P + +++S +D +++W+ +TS T P T A
Sbjct: 62 LQGHSGKV-YSLDWTPEKNWIVSASQDGRLIVWNA---LTSQKTHAIKLHCPWVMTCAFA 117
Query: 243 GSSGSI----IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFC-SV 297
+ S+ + + + N +A ++ I GH+ V + P S
Sbjct: 118 PNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQETRLITSS 177
Query: 298 GDDSCLILWDARVGTSPVI---KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
GD +C +LWD G I + H AD+ + N + N+ ++GS D +VR++D R
Sbjct: 178 GDQTC-VLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWDIR 236
Query: 355 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVE 410
+ S V + + GH + V++ PD FG+ ++DG ++D + G +++
Sbjct: 237 -IASRAVRT----YHGHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDV-RTGHQLQ 285
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 143 (55.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH++ + V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHKEAISSVLW--SDAEEICSASWDHTIKVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 365 NMVKLWD 371
Score = 116 (45.9 bits), Expect = 0.00090, P = 0.00090
Identities = 46/190 (24%), Positives = 80/190 (42%)
Query: 180 LGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATA 239
LG T + P + L+GH++ L E + S D ++ +W ++ S
Sbjct: 243 LGLTRT-PIVTLSGHKEAISSVLWSDAEE--ICSASWDHTIKVWDVESGSLKSTLTGNKV 299
Query: 240 KSAGSSGSIIKQSPKPGDG------NDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQE 293
+ S + K+ + + DG V H V V + P+ Q+
Sbjct: 300 FNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS--LTSHTGWVTSVKWSPTHEQQ 357
Query: 294 FCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 353
S D+ + LWD R +P+ + AH+ + VDW D L+L+G ADN + + R
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLA-AHEDKVLSVDWT--DSGLLLSGGADNKLYSY-R 413
Query: 354 RNLTSNGVGS 363
+ T++ VG+
Sbjct: 414 YSPTTSHVGA 423
Score = 51 (23.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 207 TEPYVLSGGKDKSVVLWSIQ 226
TE ++L+G DK+ +WS++
Sbjct: 110 TEEWILTGSYDKTSRIWSLE 129
>TAIR|locus:2092742 [details] [associations]
symbol:AT3G18060 "AT3G18060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=RCA] [GO:0006833
"water transport" evidence=RCA] [GO:0007030 "Golgi organization"
evidence=RCA] [GO:0007033 "vacuole organization" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009750
"response to fructose stimulus" evidence=RCA] [GO:0009832
"plant-type cell wall biogenesis" evidence=RCA] [GO:0016049 "cell
growth" evidence=RCA] [GO:0030243 "cellulose metabolic process"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:2.120.10.30 InterPro:IPR011042
eggNOG:COG2319 HOGENOM:HOG000162559 EMBL:AB020749 GO:GO:0080008
HSSP:P46680 OMA:LKDQKKC EMBL:AY062436 EMBL:AY114624 IPI:IPI00547687
RefSeq:NP_188434.2 UniGene:At.27343 ProteinModelPortal:Q9LV35
SMR:Q9LV35 IntAct:Q9LV35 PaxDb:Q9LV35 PRIDE:Q9LV35
EnsemblPlants:AT3G18060.1 GeneID:821331 KEGG:ath:AT3G18060
TAIR:At3g18060 InParanoid:Q9LV35 PhylomeDB:Q9LV35
ProtClustDB:CLSN2690551 ArrayExpress:Q9LV35 Genevestigator:Q9LV35
Uniprot:Q9LV35
Length = 609
Score = 109 (43.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 323
+G S+ + H + + + P + F S + ++WD RV +K H
Sbjct: 477 NGDSLTEEAVLERHRGAISVIRYSPDLSM-FASADLNREAVVWD-RVSREMKLKNMLYHS 534
Query: 324 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 383
A ++C+ W+P + ++ TGS D V +++ S + H V + ++ D
Sbjct: 535 ARINCLAWSP-NSTMVATGSLDTCVIVYE----VDKPASSRMTIKGAHLGGVYGLGFADD 589
Query: 384 KSSVFGSSAEDGLLNIWDY 402
V SS ED + +W +
Sbjct: 590 SHVV--SSGEDACIRVWSF 606
Score = 92 (37.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/120 (28%), Positives = 54/120 (45%)
Query: 129 PFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPD 188
PF K + H VN +R P +K + +D + I+D + +LG +S D
Sbjct: 176 PFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGI-IYDGKTCE----ILGELSS--D 228
Query: 189 LILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI 248
GH+ + +A++ P VL+ DKS +W I D+ + S T GSSG +
Sbjct: 229 ---DGHKGSI-YAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLN--TTLNCPGSSGGV 282
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/226 (26%), Positives = 98/226 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-----HITSSATDPATAKSAGSS 245
+ GH + A+ P ++ + DK+V +W++ D +T + S
Sbjct: 75 IEGHTKSIS-AVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 246 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
SI+ S D K + P+V GH + V F P S+ D+S I
Sbjct: 134 KSIVTASD---DKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI- 189
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD R G +K AH + V +N D +LI +GS D VR++D T+NG
Sbjct: 190 WDVRTGMC--VKTLPAHSDPVSAVSFNR-DGSLITSGSYDGLVRIWD----TANGQCVK- 241
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 411
+ + V V++SP+ + S+ D L +WD+ K GK ++Q
Sbjct: 242 TLVDDENPPVAFVKFSPNGKYILSSNL-DNTLKLWDFGK-GKTLKQ 285
Score = 144 (55.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 57/218 (26%), Positives = 96/218 (44%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSA-TDPATAKSAGSSG 246
L GH N F P V+SG D+SV +W ++ + T A +DP +A S G
Sbjct: 159 LKGHT-NYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDG 217
Query: 247 SIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
S+I G A+G V + + + V V F P+ + S D+ L L
Sbjct: 218 SLITSGSYDGLVRIWDTANGQCV--KTLVDDENPPVAFVKFSPNG-KYILSSNLDNTLKL 274
Query: 306 WDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGS 363
WD G +K + H+ + +C+ +++ I++GS D + ++ NL + V
Sbjct: 275 WD--FGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVW---NLQTKEV-- 327
Query: 364 PINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ EGH+ AV+ P ++ + + E D + IW
Sbjct: 328 -VQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 68/281 (24%), Positives = 114/281 (40%)
Query: 143 VNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFAL 202
VN +RE + ++ TD +Q G T+ IL GH ++L
Sbjct: 17 VNDLREKLKQKRLQLLDTDVSGY----ARSQGKTPVTFGPTDLVCCRILQGHTGKV-YSL 71
Query: 203 AMCPTEPYVLSGGKDKSVVLW----SIQDH--------ITSSATDPATAKSA-GSSGSII 249
P + ++S +D +++W S + H + + A P+ A G S+
Sbjct: 72 DWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVC 131
Query: 250 K----QSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFC-SVGDDSCLI 304
SP DGN + + +GH+ V + P S GD +C +
Sbjct: 132 SIFNLNSPIDKDGNHPVSR--------MLSGHKGYVSSCQYVPDEDTHLITSSGDQTC-V 182
Query: 305 LWDARVGTSPVI---KVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGV 361
LWD G + + + H AD+ V + + L ++GS D + R++D R V
Sbjct: 183 LWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWDTR------V 236
Query: 362 GSPINK-FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
S + F GH V V++ PD + FG+ +EDG ++D
Sbjct: 237 ASRAQRTFYGHEGDVNTVKFFPDGNR-FGTGSEDGTCRLFD 276
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 55/232 (23%), Positives = 92/232 (39%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDL-ILTGHQDN 197
H G+V + P+ +IV+ D +++W+ HA+ P ++T
Sbjct: 64 HTGKVYSLDWTPEKNRIVSASQDGR-LIVWNALTSQKTHAI-----KLPCAWVMT----- 112
Query: 198 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGD 257
A P+ V GG D ++++ I P + +G G + P +
Sbjct: 113 ----CAFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDE 168
Query: 258 GND---KAADGPSV------GPR-GIY-----NGHEDTVEDVTFCPSSAQEFCSVGDDSC 302
+ D V G R ++ +GH V+ V+ S+ + F S D+
Sbjct: 169 DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTT 228
Query: 303 LILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
LWD RV S + H+ D++ V + P D N TGS D + R+FD R
Sbjct: 229 ARLWDTRVA-SRAQRTFYGHEGDVNTVKFFP-DGNRFGTGSEDGTCRLFDIR 278
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 64/278 (23%), Positives = 119/278 (42%)
Query: 132 KKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLIL 191
K + + H VN ++ ++++++ T + V +W + +PN A+L L
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPN--AILS---------L 55
Query: 192 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSATDPAT---AKSAGSSGS 247
GH + ++ +E V +G ++ LW +++ I + T + + G
Sbjct: 56 YGHSSGID-SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 248 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
D N K D G Y GH V + F P + S G+D+ + +WD
Sbjct: 115 FFASGSL--DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG-RWVVSGGEDNIVKVWD 171
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
G ++ K+H+ + +D++P + L+ TGSAD +V+ +D G G P
Sbjct: 172 LTAGK--LLTEFKSHEGQIQSLDFHP-HEFLLATGSADRTVKFWDLETFELIGSGGP--- 225
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 405
+A V C+ ++PD +V E L I+ +E +
Sbjct: 226 ---ETAGVRCLSFNPDGKTVLCGLQES--LKIFSWEPI 258
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 48/163 (29%), Positives = 73/163 (44%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
+Y GH V D+ P S F S D LW T P +++ H AD+ CV ++
Sbjct: 379 LYQGHAYPVWDLDISPYSLY-FASGSHDRTARLWSFD-RTYP-LRIYAGHLADVDCVKFH 435
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
P + N + TGS D +VR++ + G+ + F GH VL + +SP+ S+
Sbjct: 436 P-NSNYLATGSTDKTVRLWSAQQ------GNSVRLFTGHRGPVLSLAFSPN-GKYLASAG 487
Query: 393 EDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSSI 435
ED L +WD E T N + F +G S+S+
Sbjct: 488 EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASM 530
Score = 136 (52.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 67/253 (26%), Positives = 105/253 (41%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGA-TNSRPDLILTGHQDN 197
H G V R L ++ +++ D + WD LG+ TN+ ++ GH
Sbjct: 341 HCGPVYSTRFLADSSGLLSCSEDM-SIRYWD----------LGSFTNT---VLYQGHAYP 386
Query: 198 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI-----TSSATDPATAKSAGSSGSIIKQS 252
+ L + P Y SG D++ LWS D K +S + S
Sbjct: 387 V-WDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGS 445
Query: 253 PKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
A G SV ++ GH V + F P+ + S G+D L LWD GT
Sbjct: 446 TDKTVRLWSAQQGNSVR---LFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLASGT 501
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL----TSNGVGSP-INK 367
+ K + H ++ + ++P D LI + S DNSVR++D RN ++G S +
Sbjct: 502 --LYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGV 558
Query: 368 FEGHSAAVLCVQW 380
+ G + VL VQ+
Sbjct: 559 YTGQMSNVLSVQF 571
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/141 (25%), Positives = 75/141 (53%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD-ARVGTSPVIKVEKAHDADLHCVDW 331
+Y H++ + ++F P+ ++ F S DD L +WD R V++ H AD+ CV W
Sbjct: 224 MYQAHKEAIRGISFSPTDSK-FVSGSDDGTLRIWDFMRCQEERVLR---GHGADVKCVHW 279
Query: 332 NPLDDNLILTGSADNS--VRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
+P +I++GS DN ++++D ++ G + H + V+ ++W+ D +
Sbjct: 280 HP-QKGMIVSGSKDNQQPIKIWDPKS------GIALATLHAHKSTVMDLKWN-DNGNWLV 331
Query: 390 SSAEDGLLNIWDYEKVGKKVE 410
+++ D LL ++D + ++V+
Sbjct: 332 TASRDHLLKLFDIRNLREEVQ 352
Score = 122 (48.0 bits), Expect = 0.00049, P = 0.00049
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIK-VEKAHDADLHCVDW 331
++ GH+ V++ P FCS G D ++ W+ VGT I VE AHD+ + + W
Sbjct: 353 VFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN--VGTDKEIGCVETAHDSIVWTLAW 410
Query: 332 NPLDDNLILTGSADNSVRMFDR 353
+PL +++ +GS D++++ + R
Sbjct: 411 HPLG-HILCSGSNDHTIKFWTR 431
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 157 (60.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 64/255 (25%), Positives = 110/255 (43%)
Query: 152 NTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYV 211
+++++A+ +D V IWD T R +L GH D+ ++ +
Sbjct: 316 DSRLLASASDDGTVKIWDTAT---------GTLQR---MLKGHNDSVR-SVVFSHDSRLI 362
Query: 212 LSGGKDKSVVLWS----IQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPS 267
SG D++V +W + H D A S + S G GN K D +
Sbjct: 363 ASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLA-SASDG-GNVKIWDTRT 420
Query: 268 VGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 327
+ + GH+D V V+F P S + S DD + +W A G+ + + + H+ +
Sbjct: 421 GSLQNVLEGHDDCVNSVSFSPDS-RLLASASDDRTVKIWHAATGS--LQRTLEGHNDWVR 477
Query: 328 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI-NKFEGHSAAVLCVQWSPDKSS 386
V ++ D LI + S D +V+++D + P+ N E H V V +S D S
Sbjct: 478 SVVFSH-DSRLIASASDDMTVKIWDTATV-------PLQNNLESHDNWVRSVVFSHD-SR 528
Query: 387 VFGSSAEDGLLNIWD 401
+ S+++D + IWD
Sbjct: 529 LLASASDDMTVKIWD 543
Score = 143 (55.4 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
GDG K D + + GH + V+ V F S + S DD + +WD GT +
Sbjct: 283 GDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS-RLLASASDDGTVKIWDTATGT--L 339
Query: 316 IKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAV 375
++ K H+ + V ++ D LI +GS D +VR+++ T+ G+ + FE H +V
Sbjct: 340 QRMLKGHNDSVRSVVFSH-DSRLIASGSNDRTVRIWE----TTTGLLR--HTFEDHEDSV 392
Query: 376 LCVQWSPDKSSVFGSSAEDGLLNIWD 401
+ V ++ D S S+++ G + IWD
Sbjct: 393 MAVSFAHD-SRRLASASDGGNVKIWD 417
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 50/219 (22%), Positives = 93/219 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-----SIQDHITSSATDPATAKSAGS 244
+L GH D +++ P + S D++V +W S+Q + + +
Sbjct: 426 VLEGHDDCVN-SVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHD 484
Query: 245 SGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI 304
S I S D K D +V + H++ V V F S + S DD +
Sbjct: 485 SRLIASASD---DMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDS-RLLASASDDMTVK 540
Query: 305 LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSP 364
+WD G+ + + HD ++ V ++P D L+ + S D +V+++ G+
Sbjct: 541 IWDTATGS--LENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIWYA------ATGTV 591
Query: 365 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
+ F+G + + +S S++ S+ +DG + IWD E
Sbjct: 592 QHTFDGSGRVAISLAFS-HTSNLLASAMDDGTVKIWDME 629
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 127 (49.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
++ GH V ++F P+ + S G+D L LWD GT + K + H + + ++
Sbjct: 17 LFTGHRGPVLSLSFSPNG-KYLASAGEDQRLKLWDLASGT--LFKELRGHTDSITSLAFS 73
Query: 333 PLDDNLILTGSADNSVRMFDRR----NLTSNGV-GSPINKFEGHSAAVLCVQW 380
P D LI + S DNSVR++D R N ++G G + + G + VL VQ+
Sbjct: 74 P-DSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQF 125
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 276 GHEDTVEDVTFCPSSAQEFC-SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
GHE + DV + PS +F S D LWDA T + +++ HD + + +
Sbjct: 263 GHERRISDVKYHPSG--KFIGSASHDMTWRLWDA--STHQELLLQEGHDKGVFSLSFQ-C 317
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +L+ +G D+ ++D R+ GS + GHS + V WSP+ V + D
Sbjct: 318 DGSLVCSGGMDSLSMLWDIRS------GSKVMTLAGHSKPIYTVAWSPNGYQV-ATGGGD 370
Query: 395 GLLNIWDYEK 404
G++N+WD K
Sbjct: 371 GIINVWDIRK 380
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 279
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 399 IWDYEKVGKKVEQGPRTT 416
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 61/252 (24%), Positives = 109/252 (43%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAGSSG 246
+ H N + + + +GG D V LWSI + I S T P + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLIL 305
+I + G+ + D + GH+ + + F P EF + G D+ + L
Sbjct: 76 ELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTNIKL 131
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD R V + + H + C+ ++P D + + + D++V+++D LT+ G +
Sbjct: 132 WDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---GKMM 182
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK--VGKKVEQGPRTTNYPAGLF 423
++F GH+ V V++ P++ + S + D + WD EK V +E P Y AG +
Sbjct: 183 SEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRY-AGSW 240
Query: 424 FQHAGHSPSSSI 435
G SP +
Sbjct: 241 V--VGLSPPPKV 250
>CGD|CAL0005315 [details] [associations]
symbol:YTM1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0070545 "PeBoW complex"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005315 GO:GO:0005654
GO:GO:0071216 GO:GO:0036180 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009267 EMBL:AACQ01000001 EMBL:AACQ01000002
GO:GO:0036170 GO:GO:0006364 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HAMAP:MF_03029 RefSeq:XP_723311.1 RefSeq:XP_723501.1
ProteinModelPortal:Q5APF0 STRING:Q5APF0 GeneID:3634765
GeneID:3634970 KEGG:cal:CaO19.12278 KEGG:cal:CaO19.4815
Uniprot:Q5APF0
Length = 466
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 69/311 (22%), Positives = 125/311 (40%)
Query: 94 DGSVPNTLVIANCE--VVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQ 151
D P T ++ + + + +P++ + + S V+K + + H V ++ +
Sbjct: 120 DSINPTTKIVMSSQLSISQPKILSGSYDGIVRTYNMSGKVEK-QYVGHSAPVKAVKWISP 178
Query: 152 NTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDL-ILTGHQDNAEFALAMCPTEPY 210
T+IV+ D V +W + L +L GH+ LA+
Sbjct: 179 -TRIVSAGNDR-QVRLWKTSYEEIIDEDEEEIEDGKTLALLEGHKAPV-VDLAVDTQTNR 235
Query: 211 VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 270
+LS G D+++ WS +S + SS S ++ D + P
Sbjct: 236 ILSAGYDQNIGFWSTNYKEMTSIQPLEYDSNVVSSSSKKRRKMAVQDATIRRR-----AP 290
Query: 271 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 330
+ GH + VE V F + SV D + WD + TS + + L +
Sbjct: 291 LSLLQGHSEPVEGVIFDAKDSTVGYSVSQDHTIKTWD--LVTSRCVDTRTTGYSLLSVLQ 348
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
+ NLI +GS+ + + D R T++ I+K GH+ V+ + SP ++F S
Sbjct: 349 LPQV--NLIASGSSARHINLHDPRVTTTSD--QTISKLVGHTNFVVGLTASPHNQNMFAS 404
Query: 391 SAEDGLLNIWD 401
S+ DG + +WD
Sbjct: 405 SSHDGTVKVWD 415
>UNIPROTKB|Q5APF0 [details] [associations]
symbol:YTM1 "Ribosome biogenesis protein YTM1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005315 GO:GO:0005654 GO:GO:0071216 GO:GO:0036180
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009267
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0036170 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
RefSeq:XP_723311.1 RefSeq:XP_723501.1 ProteinModelPortal:Q5APF0
STRING:Q5APF0 GeneID:3634765 GeneID:3634970 KEGG:cal:CaO19.12278
KEGG:cal:CaO19.4815 Uniprot:Q5APF0
Length = 466
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 69/311 (22%), Positives = 125/311 (40%)
Query: 94 DGSVPNTLVIANCE--VVKPRVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQ 151
D P T ++ + + + +P++ + + S V+K + + H V ++ +
Sbjct: 120 DSINPTTKIVMSSQLSISQPKILSGSYDGIVRTYNMSGKVEK-QYVGHSAPVKAVKWISP 178
Query: 152 NTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDL-ILTGHQDNAEFALAMCPTEPY 210
T+IV+ D V +W + L +L GH+ LA+
Sbjct: 179 -TRIVSAGNDR-QVRLWKTSYEEIIDEDEEEIEDGKTLALLEGHKAPV-VDLAVDTQTNR 235
Query: 211 VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGP 270
+LS G D+++ WS +S + SS S ++ D + P
Sbjct: 236 ILSAGYDQNIGFWSTNYKEMTSIQPLEYDSNVVSSSSKKRRKMAVQDATIRRR-----AP 290
Query: 271 RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 330
+ GH + VE V F + SV D + WD + TS + + L +
Sbjct: 291 LSLLQGHSEPVEGVIFDAKDSTVGYSVSQDHTIKTWD--LVTSRCVDTRTTGYSLLSVLQ 348
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGS 390
+ NLI +GS+ + + D R T++ I+K GH+ V+ + SP ++F S
Sbjct: 349 LPQV--NLIASGSSARHINLHDPRVTTTSD--QTISKLVGHTNFVVGLTASPHNQNMFAS 404
Query: 391 SAEDGLLNIWD 401
S+ DG + +WD
Sbjct: 405 SSHDGTVKVWD 415
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 279
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 399 IWDYEKVGKKVEQGPRTT 416
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.2e-05
Identities = 52/219 (23%), Positives = 97/219 (44%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAGSSG 246
+ H N + + + +GG D V LWSI + I S T P + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLIL 305
+I + G+ + D + GH+ + + F P EF + G D+ + L
Sbjct: 76 ELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTNIKL 131
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD R V + + H + C+ ++P D + + + D++V+++D LT+ G +
Sbjct: 132 WDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---GKMM 182
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
++F GH+ V V++ P++ + S + D + WD EK
Sbjct: 183 SEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEK 220
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 53/227 (23%), Positives = 96/227 (42%)
Query: 185 SRPDLI--LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAK 240
++P+ I LTGH E P E +++G + S+ +W ++ + + A
Sbjct: 51 NKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 241 SAGSS--GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG 298
S G + + D N K D G Y GH V + F P + S
Sbjct: 110 SLDFHPYGEFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAA 166
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 358
DD + LWD G ++ H ++ V+++P ++ L+ +GS+D ++R +D
Sbjct: 167 DDHTVKLWDLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-- 221
Query: 359 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 404
++ EG V V ++PD ++ S +D L + W+ E+
Sbjct: 222 ----QVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 279
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 399 IWDYEKVGKKVEQGPRTT 416
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.2e-05
Identities = 52/219 (23%), Positives = 97/219 (44%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAGSSG 246
+ H N + + + +GG D V LWSI + I S T P + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLIL 305
+I + G+ + D + GH+ + + F P EF + G D+ + L
Sbjct: 76 ELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTNIKL 131
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD R V + + H + C+ ++P D + + + D++V+++D LT+ G +
Sbjct: 132 WDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---GKMM 182
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
++F GH+ V V++ P++ + S + D + WD EK
Sbjct: 183 SEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEK 220
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 53/227 (23%), Positives = 96/227 (42%)
Query: 185 SRPDLI--LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAK 240
++P+ I LTGH E P E +++G + S+ +W ++ + + A
Sbjct: 51 NKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 241 SAGSS--GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG 298
S G + + D N K D G Y GH V + F P + S
Sbjct: 110 SLDFHPYGEFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAA 166
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 358
DD + LWD G ++ H ++ V+++P ++ L+ +GS+D ++R +D
Sbjct: 167 DDHTVKLWDLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-- 221
Query: 359 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 404
++ EG V V ++PD ++ S +D L + W+ E+
Sbjct: 222 ----QVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 279
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 399 IWDYEKVGKKVEQGPRTT 416
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.2e-05
Identities = 52/219 (23%), Positives = 97/219 (44%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAGSSG 246
+ H N + + + +GG D V LWSI + I S T P + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLIL 305
+I + G+ + D + GH+ + + F P EF + G D+ + L
Sbjct: 76 ELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTNIKL 131
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD R V + + H + C+ ++P D + + + D++V+++D LT+ G +
Sbjct: 132 WDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---GKMM 182
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
++F GH+ V V++ P++ + S + D + WD EK
Sbjct: 183 SEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEK 220
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 53/227 (23%), Positives = 96/227 (42%)
Query: 185 SRPDLI--LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAK 240
++P+ I LTGH E P E +++G + S+ +W ++ + + A
Sbjct: 51 NKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 241 SAGSS--GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG 298
S G + + D N K D G Y GH V + F P + S
Sbjct: 110 SLDFHPYGEFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAA 166
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 358
DD + LWD G ++ H ++ V+++P ++ L+ +GS+D ++R +D
Sbjct: 167 DDHTVKLWDLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-- 221
Query: 359 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 404
++ EG V V ++PD ++ S +D L + W+ E+
Sbjct: 222 ----QVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 279
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 399 IWDYEKVGKKVEQGPRTT 416
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 52/219 (23%), Positives = 97/219 (44%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAGSSG 246
+ H N + + + +GG D V LWSI + I S T P + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLIL 305
+I + G+ + D + GH+ + + F P EF + G D+ + L
Sbjct: 76 ELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTNIKL 131
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD R V + + H + C+ ++P D + + + D++V+++D LT+ G +
Sbjct: 132 WDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---GKMM 182
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
++F GH+ V V++ P++ + S + D + WD EK
Sbjct: 183 SEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEK 220
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 53/227 (23%), Positives = 96/227 (42%)
Query: 185 SRPDLI--LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAK 240
++P+ I LTGH E P E +++G + S+ +W ++ + + A
Sbjct: 51 NKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 241 SAGSS--GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG 298
S G + + D N K D G Y GH V + F P + S
Sbjct: 110 SLDFHPYGEFVASGSQ--DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG-KWLASAA 166
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 358
DD + LWD G ++ H ++ V+++P ++ L+ +GS+D ++R +D
Sbjct: 167 DDHTVKLWDLTAGK--MMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-- 221
Query: 359 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL-LNIWDYEK 404
++ EG V V ++PD ++ S +D L + W+ E+
Sbjct: 222 ----QVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEPER 263
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 50/198 (25%), Positives = 97/198 (48%)
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVG-PRGIYN--GHED 279
W +Q+ I + A++ ++ +SG ++ G+D + S+ P I + GH
Sbjct: 11 WKLQE-IVAHASNVSSLVLGKASGRLLATG-----GDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 280 TVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
VE V ++ +E G S I +WD + +++ H A++ +D++P +
Sbjct: 65 PVESVRL--NTPEELIVAGSQSGSIRVWDLEA--AKILRTLMGHKANICSLDFHPYGE-F 119
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
+ +GS D +++++D R G + ++ GHS AV C+++SPD S+A+D +
Sbjct: 120 VASGSQDTNIKLWDIRR---KGC---VFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVK 172
Query: 399 IWDYEKVGKKVEQGPRTT 416
+WD GK + + P T
Sbjct: 173 LWDLT-AGKMMSEFPGHT 189
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 52/219 (23%), Positives = 97/219 (44%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHITSSA--TDPATAKSAGSSG 246
+ H N + + + +GG D V LWSI + I S T P + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLIL 305
+I + G+ + D + GH+ + + F P EF + G D+ + L
Sbjct: 76 ELIVAGSQ--SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG--EFVASGSQDTNIKL 131
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD R V + + H + C+ ++P D + + + D++V+++D LT+ G +
Sbjct: 132 WDIR-RKGCVFRY-RGHSQAVRCLRFSP-DGKWLASAADDHTVKLWD---LTA---GKMM 182
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
++F GH+ V V++ P++ + S + D + WD EK
Sbjct: 183 SEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEK 220
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 150 (57.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 60/225 (26%), Positives = 102/225 (45%)
Query: 185 SRPDLI--LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH--ITSSATDPATAK 240
S+P+ I LTGH +A + +E V++G S+ LW ++ + + A+
Sbjct: 51 SKPNCIMSLTGHT-SAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASIS 109
Query: 241 SAG--SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG 298
S G + D N K D G Y GH V + F P + S
Sbjct: 110 SLDFHPMGEYLASGSV--DSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG-KWLASAS 166
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTS 358
DDS + LWD G +I +H + ++ V ++P ++ L+ +GSAD +V+++D
Sbjct: 167 DDSTVKLWDLIAGK--MITEFTSHTSAVNVVQFHP-NEYLLASGSADRTVKLWDLEKF-- 221
Query: 359 NGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
N +GS EG + V V ++PD S ++ S + L ++ +E
Sbjct: 222 NMIGSS----EGETGVVRSVLFNPDGSCLYSGS--ENTLRVYGWE 260
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/194 (23%), Positives = 95/194 (48%)
Query: 219 SVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHE 278
++ W +Q+ I + +++ ++ SSG ++ + N A P+ GH
Sbjct: 7 TITSWKLQE-IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMS--LTGHT 63
Query: 279 DTVEDVTFCPSSAQEFCSVGDDS-CLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDN 337
V + F +S++E G S L LWD + +++ H A + +D++P+ +
Sbjct: 64 SAVGCIQF--NSSEERVVAGSLSGSLRLWDLEA--AKILRTLMGHKASISSLDFHPMGEY 119
Query: 338 LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLL 397
L +GS D++++++D R G + +++GH+ AV C+ +SPD S+++D +
Sbjct: 120 LA-SGSVDSNIKLWDVRR---KGC---VFRYKGHTQAVRCLAFSPD-GKWLASASDDSTV 171
Query: 398 NIWDYEKVGKKVEQ 411
+WD GK + +
Sbjct: 172 KLWDLI-AGKMITE 184
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 54/218 (24%), Positives = 101/218 (46%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLS-GGKDKSVVLWSI-QDHITSSATDPATAKSAGSSGSI 248
+ H N +L + + +L+ GG+D V +W++ + + S T +A S
Sbjct: 16 IVAHSSNVS-SLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSS 74
Query: 249 IKQSPKPG-DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILW 306
++ G+ + D + GH+ ++ + F P E+ + G DS + LW
Sbjct: 75 EERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG--EYLASGSVDSNIKLW 132
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
D R V + K H + C+ ++P D + + S D++V+++D L + G I
Sbjct: 133 DVR-RKGCVFRY-KGHTQAVRCLAFSP-DGKWLASASDDSTVKLWD---LIA---GKMIT 183
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
+F H++AV VQ+ P++ + SA D + +WD EK
Sbjct: 184 EFTSHTSAVNVVQFHPNEYLLASGSA-DRTVKLWDLEK 220
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 147 (56.8 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 212 LSGGKDKSVVLWSIQDHITSSATDPATAK--SAGSSGSIIKQSPKPGDGNDKAADGPSVG 269
L+GG DK+VVL+ + K + I D + +
Sbjct: 225 LTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSS 284
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHC 328
+ I + H+ V D++ +S S DDS D R G S + VE +H
Sbjct: 285 SKAIIDVHQAPVTDISL-NASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHS 343
Query: 329 VDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 387
++++P D LI TG+AD V+++D +N T V + F GH+AAV + +S +
Sbjct: 344 IEFHP--DGLIFGTGAADAVVKIWDLKNQT---VAAA---FPGHTAAVRSIAFS-ENGYY 394
Query: 388 FGSSAEDGLLNIWDYEKV 405
+ +EDG + +WD K+
Sbjct: 395 LATGSEDGEVKLWDLRKL 412
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 68/246 (27%), Positives = 103/246 (41%)
Query: 181 GATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK 240
G+ N + L GH + A P Y+ + DK+V +W++ DH+ T T
Sbjct: 73 GSANYKLMCTLEGHTKSISSA-KFSPCGKYLGTSSADKTVKIWNM-DHMICERT--LTGH 128
Query: 241 SAG------SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEF 294
G SS S S D K + + GH + V F P S+
Sbjct: 129 KLGVNDIAWSSDSRCVVSASD-DKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVV 187
Query: 295 CSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
D+S I WD + G IK AH + V +N D +LI +GS D VR++D
Sbjct: 188 SGSFDESVRI-WDVKTGMC--IKTLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWD-- 241
Query: 355 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ--G 412
T+NG + + V V++SP+ + S+ D L +WD+ K GK ++Q G
Sbjct: 242 --TANGQCIK-TLVDDENPPVAFVKFSPNGKYILASNL-DSTLKLWDFSK-GKTLKQYTG 296
Query: 413 PRTTNY 418
+ Y
Sbjct: 297 HENSKY 302
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 58/224 (25%), Positives = 97/224 (43%)
Query: 185 SRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSA-TDPATAK 240
SR L GH +N F P V+SG D+SV +W ++ + T A +DP +A
Sbjct: 161 SRMTKTLKGH-NNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV 219
Query: 241 SAGSSGSIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD 299
S GS+I G A+G + + + + V V F P+ S
Sbjct: 220 SFNRDGSLIASGSYDGLVRIWDTANGQCI--KTLVDDENPPVAFVKFSPNGKYILAS-NL 276
Query: 300 DSCLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLT 357
DS L LWD G + +K H+ +C+ +++ I++GS D + ++ NL
Sbjct: 277 DSTLKLWDFSKGKT--LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW---NLQ 331
Query: 358 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ + + EGH+ VL P ++ + + E D ++IW
Sbjct: 332 TREI---VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 68/246 (27%), Positives = 103/246 (41%)
Query: 181 GATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAK 240
G+ N + L GH + A P Y+ + DK+V +W++ DH+ T T
Sbjct: 73 GSANYKLMCTLEGHTKSISSA-KFSPCGKYLGTSSADKTVKIWNM-DHMICERT--LTGH 128
Query: 241 SAG------SSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEF 294
G SS S S D K + + GH + V F P S+
Sbjct: 129 KLGVNDIAWSSDSRCVVSASD-DKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVV 187
Query: 295 CSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
D+S I WD + G IK AH + V +N D +LI +GS D VR++D
Sbjct: 188 SGSFDESVRI-WDVKTGMC--IKTLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWD-- 241
Query: 355 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ--G 412
T+NG + + V V++SP+ + S+ D L +WD+ K GK ++Q G
Sbjct: 242 --TANGQCIK-TLVDDENPPVAFVKFSPNGKYILASNL-DSTLKLWDFSK-GKTLKQYTG 296
Query: 413 PRTTNY 418
+ Y
Sbjct: 297 HENSKY 302
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 58/224 (25%), Positives = 97/224 (43%)
Query: 185 SRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSA-TDPATAK 240
SR L GH +N F P V+SG D+SV +W ++ + T A +DP +A
Sbjct: 161 SRMTKTLKGH-NNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV 219
Query: 241 SAGSSGSIIKQSPKPGDGND-KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD 299
S GS+I G A+G + + + + V V F P+ S
Sbjct: 220 SFNRDGSLIASGSYDGLVRIWDTANGQCI--KTLVDDENPPVAFVKFSPNGKYILAS-NL 276
Query: 300 DSCLILWDARVGTSPVIKVEKAHDADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLT 357
DS L LWD G + +K H+ +C+ +++ I++GS D + ++ NL
Sbjct: 277 DSTLKLWDFSKGKT--LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW---NLQ 331
Query: 358 SNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAE-DGLLNIW 400
+ + + EGH+ VL P ++ + + E D ++IW
Sbjct: 332 TREI---VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 147 (56.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 66/259 (25%), Positives = 104/259 (40%)
Query: 151 QNTKIVATHTDSPDVLIWDVE------AQPNRHAVLGATNSRPDLILTGHQDNAEFALAM 204
+N ++ HT S L W E +Q V T+ R +L GH A + +
Sbjct: 263 KNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGH---AHWVNTL 319
Query: 205 CPTEPYVL-SGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAA 263
YVL +G D + + + A + A S G I S D
Sbjct: 320 ALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSKGMEILISGS--DDFTVIM 377
Query: 264 DGPSVGPRGI--YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKA 321
PSV I GH+ + V+F P + F S D + LWD + G + +
Sbjct: 378 WNPSVTKTSISRLTGHQQLINLVSFSPDG-RYFASASFDKSIKLWDGQSGK--FLGNFRG 434
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H ++ V W+ D +++GS D++++++D + + GH+ V V WS
Sbjct: 435 HVGAVYQVCWSS-DSRYLVSGSKDSTLKIWDIKTKKME------KELPGHADEVYTVDWS 487
Query: 382 PDKSSVFGSSAEDGLLNIW 400
PD V S ++D LL IW
Sbjct: 488 PDGDRV-ASGSKDRLLRIW 505
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH + V + F P + F SVG D+ + +WD + TS K H + V W+P
Sbjct: 137 SGHTEAVLNCAFSPDG-KGFVSVGGDTTVRIWD--IYTSTPTHTLKGHTNWVLQVAWSP- 192
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP----DKSSVFGS 390
D I T + +R++ + T +GS + +GH+ + + W P K S
Sbjct: 193 DSKKIATAGMEGDIRIWCPQ--TGKQLGSTL---KGHTKFITGLSWEPFHLNPKCVRLAS 247
Query: 391 SAEDGLLNIWDYE 403
S++D + IWD E
Sbjct: 248 SSKDSTIRIWDTE 260
Score = 120 (47.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 296 SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 355
S DD +I+W+ V + + ++ H ++ V ++P D + S D S++++D ++
Sbjct: 368 SGSDDFTVIMWNPSVTKTSISRLT-GHQQLINLVSFSP-DGRYFASASFDKSIKLWDGQS 425
Query: 356 LTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQ 411
G + F GH AV V WS D S S ++D L IWD + KK+E+
Sbjct: 426 ------GKFLGNFRGHVGAVYQVCWSSD-SRYLVSGSKDSTLKIWDIKT--KKMEK 472
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 150 PQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNS 185
P+ ++ ++ DS + IWD E+ N ++ G T S
Sbjct: 240 PKCVRLASSSKDST-IRIWDTESCKNLMSLSGHTMS 274
Score = 44 (20.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 150 PQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATN 184
P V+ D+ V IWD+ H + G TN
Sbjct: 150 PDGKGFVSVGGDTT-VRIWDIYTSTPTHTLKGHTN 183
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 150 (57.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
+Y GH V D+ P S F S D LW T P +++ H D+ CV ++
Sbjct: 379 LYQGHAYPVWDLDISPCSLY-FASASHDRTARLWSFD-RTYP-LRIYAGHLLDVDCVKFH 435
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
P + N + TGS D +VR++ + G+ + F GH VL + +SP+ S+
Sbjct: 436 P-NSNYLATGSTDKTVRLWSTQQ------GNSVRLFTGHRGPVLALAFSPN-GKYLASAG 487
Query: 393 EDGLLNIWD 401
ED L +WD
Sbjct: 488 EDQRLKLWD 496
Score = 121 (47.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
++ GH V + F P+ + S G+D L LWD GT + K + H ++ + ++
Sbjct: 463 LFTGHRGPVLALAFSPNG-KYLASAGEDQRLKLWDLASGT--LYKELRGHTDNITSLTFS 519
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSN 359
P D +LI + S DNSVR++D RN N
Sbjct: 520 P-DSSLIASASMDNSVRVWDIRNTYCN 545
Score = 41 (19.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQ 173
E+ N+K++A D+ V +W + ++
Sbjct: 275 EISPNSKLLAAGFDNSCVKLWSLRSK 300
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 150 (57.9 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 55/207 (26%), Positives = 91/207 (43%)
Query: 206 PTEPYVLSGGKDKSVVLWSI--QDHITS---SATDPA-TAKSAGSSGSIIKQSPKPGDGN 259
PTEP++L+ D +V +W+ Q+ + S S +P TA+ I+ S D
Sbjct: 25 PTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGSD---DTY 81
Query: 260 DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE 319
+ + ++ + H D + + P+ S DD + LWD G S +V
Sbjct: 82 IRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPY-ILSSSDDMFIKLWDYEKGWSNT-QVF 139
Query: 320 KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKF--EGHSAAVLC 377
+ H + + WNP D N T S D +V+++ + SP F EGH +
Sbjct: 140 EGHSHYVMSIAWNPKDTNQFATASLDKTVKVWS--------INSPHPHFTLEGHEKGINS 191
Query: 378 VQW-SPDKSSVFGSSAEDGLLNIWDYE 403
V++ S + S A+D L+ IWDY+
Sbjct: 192 VEYFSGGEKPYLISGADDKLVKIWDYQ 218
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 141 (54.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH + V V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHMEAVSSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 365 NIVKLWD 371
Score = 46 (21.3 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 208 EPYVLSGGKDKSVVLWSIQ 226
E ++L+G DK+ +WS++
Sbjct: 111 EEWILTGSYDKTSRIWSLE 129
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 141 (54.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH + V V + S A+E CS D + +WD G+ +K + +C+ ++PL
Sbjct: 254 SGHMEAVSSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTGNKVFNCISYSPL 308
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLD 364
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 365 NIVKLWD 371
Score = 46 (21.3 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 208 EPYVLSGGKDKSVVLWSIQ 226
E ++L+G DK+ +WS++
Sbjct: 111 EEWILTGSYDKTSRIWSLE 129
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 137 (53.3 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH + V V + A E CS D + LWDA G K + +C+ ++PL
Sbjct: 253 SGHNEAVSSVLWM--DADELCSASWDHTIRLWDAETGGQ---KSTLSGSKVFNCISYSPL 307
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
L +GS D VR++D R+ + V + H+ V V+W+P S + D
Sbjct: 308 CRRLA-SGSTDRHVRLWDPRSKDGSLV---LLSLTSHNGWVTAVRWAPSHEHQLVSGSLD 363
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 364 NVVKLWD 370
Score = 50 (22.7 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 193 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWS 224
GH + + +A+ PT SG DK + +WS
Sbjct: 187 GHAGSVD-TIAVDPTRTKFCSGSWDKMLKIWS 217
Score = 37 (18.1 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 12/60 (20%), Positives = 30/60 (50%)
Query: 78 QATYKNRQRLYLSEQTDGSVPNTLVIANC-----EVVKPRVAAAEHISQFNEEARSPFVK 132
QA + + YL + S+P + +A+ ++++ + A +H+ +F+ R F++
Sbjct: 5 QARFFTENKKYLVDDVPFSIPASSEVADLSGVINKLLEAKNAGHKHV-EFDFLVRGQFLR 63
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 148 (57.2 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 60/257 (23%), Positives = 104/257 (40%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ + IL GH + + P Y+LS +D +V LW
Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPV-YGASFSPDRNYLLSSSEDGTVRLW 570
Query: 224 SIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAAD---GPSVGPRGIYNGHEDT 280
S+Q + S G G+D+ A P I+ GH
Sbjct: 571 SLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG-GHDRVARLWATDHYQPLRIFAGHLAD 629
Query: 281 VEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI 339
V F P+S + + G D + LWD G +++ H +H + ++P + +
Sbjct: 630 VNCTRFHPNS--NYVATGSADRTVRLWDVLNGNC--VRIFTGHKGPIHSLTFSP-NGRFL 684
Query: 340 LTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI 399
TG+ D V ++D G G + + +GH+ V +++S D + S + D + +
Sbjct: 685 ATGATDGRVLLWDI------GHGLMVGELKGHTDTVCSLRFSRD-GEILASGSMDNTVRL 737
Query: 400 WDYEKVGKKVEQGPRTT 416
WD K + VE TT
Sbjct: 738 WDAVKAFEDVETDDFTT 754
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 277 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDD 336
H D V D+TF P + S D L +WD + ++KV + H ++C ++P D
Sbjct: 170 HTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLK-DDGNMVKVLRGHQNWVYCSAFSP-DS 227
Query: 337 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 396
+++ + A +V ++D T I K EGH V+C ++SPD ++ +++ D
Sbjct: 228 SVLCSVGAGKAVFLWDMDKYTL------IRKLEGHHNDVVCCEFSPD-GALLATASYDTR 280
Query: 397 LNIWD 401
+ +WD
Sbjct: 281 VIVWD 285
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 145 (56.1 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH T+ F P ++ + D+ +WD T P+ + K H + CV W+P D
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQT-PMHTL-KGHYNWVLCVSWSP-D 197
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP------DKSSVFG 389
+I TGS DN++R++D ++ +G + GHS + + W P
Sbjct: 198 GEVIATGSMDNTIRLWDPKS--GQCLGDALR---GHSKWITSLSWEPIHLVKPGSKPRLA 252
Query: 390 SSAEDGLLNIWD 401
SS++DG + IWD
Sbjct: 253 SSSKDGTIKIWD 264
Score = 135 (52.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 289 SSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSV 348
+S + + DD + LW+ T P+ ++ H ++ V ++P D I++ S DNS+
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMT-GHQKLVNHVAFSP-DGRYIVSASFDNSI 426
Query: 349 RMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
+++D R+ G I+ F GH A+V V WS D + S ++D L +WD
Sbjct: 427 KLWDGRD------GKFISTFRGHVASVYQVAWSSD-CRLLVSCSKDTTLKVWD 472
Score = 123 (48.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 267 SVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL 326
S P GH+ V V F P + S D+ + LWD R G I + H A +
Sbjct: 391 STKPIARMTGHQKLVNHVAFSPDG-RYIVSASFDNSIKLWDGRDGK--FISTFRGHVASV 447
Query: 327 HCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSS 386
+ V W+ D L+++ S D +++++D R + V P GH V V WS D
Sbjct: 448 YQVAWSS-DCRLLVSCSKDTTLKVWDVRTRKLS-VDLP-----GHKDEVYTVDWSVDGKR 500
Query: 387 VFGSSAEDGLLNIWDY 402
V S +D ++ +W +
Sbjct: 501 VC-SGGKDKMVRLWTH 515
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 299 DDSCLILWDARV--GTSPVIKVEKA---HDADLHCVDWNPLDDNLILTGSADNSVRMFDR 353
+D +L+ R PV + A H + + C + P + ++TG+ DN+ R++D
Sbjct: 114 EDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDC 173
Query: 354 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
T P++ +GH VLCV WSPD V + + D + +WD
Sbjct: 174 DTQT------PMHTLKGHYNWVLCVSWSPD-GEVIATGSMDNTIRLWD 214
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 150 PQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNS 185
P + +A+ + + IWD ++ ++ + G TNS
Sbjct: 245 PGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNS 280
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 144 (55.7 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 365 PLARMTGHQALINQVVFSPDS-RVIASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 421
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 422 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLSTDL---PGHADEVYAVDWSPDGQRV-A 473
Query: 390 SSAEDGLLNIW 400
S +D L IW
Sbjct: 474 SGGKDKCLRIW 484
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 292 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 351
+ S DD L LW P+ ++ H A ++ V ++P D +I + S D S++++
Sbjct: 343 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVVFSP-DSRVIASASFDKSIKLW 400
Query: 352 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 401 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 443
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 104 (41.7 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
+++ I +GS D+ V ++ +R+ PI + GH+ V CV W+P S+ S+++D
Sbjct: 562 NEDFIASGSEDHKVYIWHKRSEL------PIAELTGHTRTVNCVSWNPQIPSMMASASDD 615
Query: 395 GLLNIW 400
G + IW
Sbjct: 616 GTVRIW 621
Score = 78 (32.5 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPL 334
GH V + + P + + G D C LW V T + K+ ++H+ L V WNP
Sbjct: 379 GHAYGVSYIAWSPDDSY-LVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP- 436
Query: 335 DDNLILTG 342
D +TG
Sbjct: 437 DGKRFVTG 444
Score = 63 (27.2 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNA 198
H EV + TK+ AT + V+IW V+ P+ H +L + L GH
Sbjct: 334 HCNEVWFCKFSNDGTKL-ATGSKDTTVIIWQVD--PDTH-LLKLLKT-----LEGHAYGV 384
Query: 199 EFALAMCPTEPYVLSGGKD--KSVVLWSIQ 226
+ +A P + Y+++ G D + LW++Q
Sbjct: 385 SY-IAWSPDDSYLVACGPDDCSELWLWNVQ 413
Score = 46 (21.3 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 132 KKHKTIIHPG-EVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLI 190
++ +T++ E+ R R L NTK+ + DS +LI V +R T I
Sbjct: 279 RRLQTLLRQAVELQRDRCLYHNTKL-DNNLDSVSLLIDHV---CSRRQFPCYTQQ----I 330
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSI 225
LT H + F + +G KD +V++W +
Sbjct: 331 LTEHCNEVWFC-KFSNDGTKLATGSKDTTVIIWQV 364
Score = 42 (19.8 bits), Expect = 9.3e-07, Sum P(4) = 9.3e-07
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 85 QRLYLSEQTDGSVPNTLVIANCEV 108
Q+ YL DG V L + CE+
Sbjct: 197 QQKYLEYLEDGKVLEALQVLRCEL 220
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 144 (55.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 66/309 (21%), Positives = 124/309 (40%)
Query: 112 RVAAAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVE 171
+ A+ SQ +++ ++ + I+ + R + Q K H D IWDV
Sbjct: 108 KTKASHSTSQLSQKLKTTYKASTSKIVSSFKTTTSRAICQLVKEYIGHRDG----IWDVS 163
Query: 172 AQPNRHAVLGATNSRPDLIL------------TGHQDNAEFALAMCPTEPYVLSGGKDKS 219
+ VLG ++ +L GH + ++ P+E L+ D++
Sbjct: 164 VTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVN-SIKFHPSEQLALTASGDQT 222
Query: 220 VVLWSIQDHITSSATDPATAKSAGSSGSI-IKQSPKPGDGNDKAADGPSVG-PRGIYNGH 277
+W + + T++ I +P D ++D P+V P H
Sbjct: 223 AHIWRYVVQLPTPQPVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVPLTSLKSH 282
Query: 278 EDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADL-HCVDWNPLDD 336
+ V + Q + D + L+D V TS ++ HD +L HC +P
Sbjct: 283 QGVVIAADWLVGGKQVVTASWDRTAN-LYD--VETSELVHSLTGHDQELTHCCT-HPTQ- 337
Query: 337 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 396
L++T S D + R++D R+ + + V N F+GH+ V ++ + V GS +D
Sbjct: 338 RLVVTSSRDTTFRLWDFRDPSIHSV----NVFQGHTDTVTSAVFTVGDNVVSGS--DDRT 391
Query: 397 LNIWDYEKV 405
+ +WD + +
Sbjct: 392 VKVWDLKNM 400
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 141 (54.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 60/263 (22%), Positives = 110/263 (41%)
Query: 151 QNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPY 210
Q++K++ + +D + IWDVE+ + L GH++ F ++ P
Sbjct: 98 QDSKLICSASDDKTIKIWDVES------------GKMVKTLKGHKEYV-FGVSFNPQSNL 144
Query: 211 VLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAAD-- 264
++SG D++V +W + + S+ +DP T G+++ DG + D
Sbjct: 145 IVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSY--DGTVRIWDTT 202
Query: 265 -GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAH 322
G + +G E V V F P+ +F G D+ L LW +K H
Sbjct: 203 TGQLLNTISTEDGKE--VSFVKFSPNG--KFVLAGTLDNTLRLWSYN-NNKKCLKTYTGH 257
Query: 323 DADLHCV--DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQW 380
+ +C+ ++ I+TGS DN + ++ NL + + + GH VL V
Sbjct: 258 KNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY---NLQTREI---VQTLAGHEDVVLTVAC 311
Query: 381 SPDKSSVFGSSAE-DGLLNIWDY 402
P ++ + + E D + IW +
Sbjct: 312 HPTENIIASGALEKDRSVKIWKH 334
Score = 124 (48.7 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 59/233 (25%), Positives = 95/233 (40%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD---HITSSATDPATAKSAGSSGS 247
L GH + ++ P ++ S DK++ +W D T + A S S
Sbjct: 42 LKGHLKSIS-SVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 248 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
+ S D K D S GH++ V V+F P S S D + +WD
Sbjct: 101 KLICSASD-DKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQS-NLIVSGSFDENVRIWD 158
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
V T K+ AH + V +N D L+++GS D +VR++D T+ + + I+
Sbjct: 159 --VNTGECTKMISAHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWDT---TTGQLLNTIST 212
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK--KVEQGPRTTNY 418
+G + V++SP+ V + D L +W Y K K G + Y
Sbjct: 213 EDGKEVSF--VKFSPNGKFVLAGTL-DNTLRLWSYNNNKKCLKTYTGHKNEKY 262
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/214 (23%), Positives = 89/214 (41%)
Query: 189 LILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSAT-DPATAKSAGSSG 246
+IL H D A ++ E ++++G ++ W S +++ + T + +
Sbjct: 1 MILQAH-DQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCR 59
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
+ +K D K D GH V+ V + P+ + S G D + LW
Sbjct: 60 TDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSL-LVSGGKDYLVKLW 118
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
DA+ G ++ H + CV WN + N +LT S D ++++D R++ +
Sbjct: 119 DAKSGRE--LRSFHGHKNIVQCVKWNQ-NGNWVLTASKDQIIKLYDIRSMKE------LE 169
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
F GH+ V + W P F S + DG + W
Sbjct: 170 SFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHW 203
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 157 (60.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 66/278 (23%), Positives = 117/278 (42%)
Query: 132 KKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLIL 191
K + + H G VN + + ++++ T D V +W + G T S P + L
Sbjct: 7 KLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSI----------GKTTS-P-MSL 54
Query: 192 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH-ITSSATDPATAKSAGSS---GS 247
GH + ++A E VL+G + LW +++ + + T + SA G
Sbjct: 55 CGHTSPVD-SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 248 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
+ D N + D G Y GH + + F P + S G D+ + +WD
Sbjct: 114 FLASGSS--DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDG-RWVVSGGLDNVVKVWD 170
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
G ++ K H+ + +D++PL+ L+ TGSAD +V+ +D G P
Sbjct: 171 LTAGK--LLHEFKCHEGPIRSLDFHPLEF-LLATGSADRTVKFWDLETFELIGTTRP--- 224
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 405
+ V + + PD ++F +DGL ++ +E V
Sbjct: 225 ---EATGVRAIAFHPDGQTLF-CGLDDGL-KVYSWEPV 257
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 388 FGSSAEDGLLNIWDYEKVGKKVEQGPRTTN 417
F S + ++ +K G VE+ P+T N
Sbjct: 441 FEESKQSAVVQSATRKKSGLAVEEEPQTQN 470
>ZFIN|ZDB-GENE-041010-167 [details] [associations]
symbol:tssc1 "tumor suppressing subtransferable
candidate 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-041010-167 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314403
HOGENOM:HOG000264967 EMBL:BC083257 IPI:IPI00507270
RefSeq:NP_001006065.1 UniGene:Dr.108122 ProteinModelPortal:Q5XJP1
PRIDE:Q5XJP1 GeneID:450045 KEGG:dre:450045 CTD:7260
HOVERGEN:HBG052937 InParanoid:Q5XJP1 OrthoDB:EOG4C5CJP
NextBio:20833026 ArrayExpress:Q5XJP1 Uniprot:Q5XJP1
Length = 387
Score = 127 (49.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 58/201 (28%), Positives = 90/201 (44%)
Query: 182 ATNSRPDLILTGHQDNAEFALAMCPT-EPY-----VLSGGKDKSVVLWSIQDH-----IT 230
++N+ L L H DN+ C EP V+S ++ V+LW +Q+ I+
Sbjct: 116 SSNNPQTLELLCHLDNSAHGSMACVLWEPMGDGKRVISLAENH-VLLWDLQESSAKATIS 174
Query: 231 SSATDPATAKSAGSSGSIIKQSP-----KPGDGNDKAADGPSVGPRG-IY---NGHEDTV 281
SSAT + ++G K SP + ND A G + IY N H V
Sbjct: 175 SSATLEGKGQLKFTAG---KWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLV 231
Query: 282 EDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILT 341
D+ F P+ S GDD + WD R + PV +E+ H + V +N D L+LT
Sbjct: 232 RDLDFNPNKQYYLASCGDDCKVKFWDVRHISEPVKCLEE-HSHWVWSVRYNHSHDQLLLT 290
Query: 342 GSADNSVRMFDRRNLTSNGVG 362
S+D+ V + + +++S G
Sbjct: 291 ASSDSRVILSNMVSISSEPFG 311
Score = 57 (25.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 363 SPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI 399
S I+ +E H +V V+WS +F S + DG L I
Sbjct: 338 SIISTYEEHEDSVYAVEWSAADPWLFASLSYDGRLVI 374
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 62/278 (22%), Positives = 117/278 (42%)
Query: 132 KKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLIL 191
K + + H VN ++ ++++++ T + V +W + +PN A+L L
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPN--AILS---------L 55
Query: 192 TGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT---DPATAKSAGSSGS 247
GH + ++ +E V +G ++ LW +++ + + T + + G
Sbjct: 56 YGHSSGID-SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE 114
Query: 248 IIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
D N K D G Y GH V + F P + S G+D+ + +WD
Sbjct: 115 FFASGSL--DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG-RWIVSGGEDNVVKVWD 171
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
G ++ K+H+ + +D++P + L+ TGSAD +V+ +D G G
Sbjct: 172 LTAGK--LLHEFKSHEGKIQSLDFHP-HEFLLATGSADKTVKFWDLETFELIGSGGT--- 225
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 405
+ V C+ ++PD SV E L I+ +E +
Sbjct: 226 ---ETTGVRCLTFNPDGKSVLCGLQES--LKIFSWEPI 258
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 315 PLARMTGHQALINQVLFSPDS-RIIASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 371
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 372 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLAADL---PGHADEVYAVDWSPDGQRV-A 423
Query: 390 SSAEDGLLNIW 400
S +D L IW
Sbjct: 424 SGGKDKCLRIW 434
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 292 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 351
+ S DD L +W P+ ++ H A ++ V ++P D +I + S D S++++
Sbjct: 293 ERLVSGSDDFTLFMWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIIASASFDKSIKLW 350
Query: 352 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 351 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 393
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 64/280 (22%), Positives = 114/280 (40%)
Query: 164 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 223
D+ + D E+ ++ S IL GH + ++ P Y+LS +D ++ LW
Sbjct: 468 DLNLIDKESDDVLERIMDEKTSSESKILHGHSGPV-YGVSFSPDRNYLLSSSEDGTIRLW 526
Query: 224 SIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAAD---GPSVGPRGIYNGHEDT 280
S+Q + S G G+D+ A P I+ GH
Sbjct: 527 SLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSG-GHDRVARLWATDHYQPLRIFAGHLAD 585
Query: 281 VEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLI 339
V F P+S + + G D + LWD G +++ H +H + ++P + +
Sbjct: 586 VTCTRFHPNS--NYVATGSSDRTVRLWDVLNGNC--VRIFTGHKGPIHSLAFSP-NGKFL 640
Query: 340 LTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNI 399
+GS D V ++D G G I + +GH+ + +++S D + S + D + +
Sbjct: 641 ASGSTDGRVLLWDI------GHGLMIAELKGHTGTIYALKFSRD-GEIIASGSIDNTVRL 693
Query: 400 WDYEKVGKKVEQGPRTTNYPAGLFFQHAGHSPSSSIKFVL 439
WD + VE T ++ A H H P +S + +L
Sbjct: 694 WDVMRAIDDVE----TDDFTAAT--GHI-HLPDNSQELLL 726
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 364 PLARMTGHQALINQVLFSPDS-RIIASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 420
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 421 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLAADL---PGHADEVYAVDWSPDGQRV-A 472
Query: 390 SSAEDGLLNIW 400
S +D L IW
Sbjct: 473 SGGKDKCLRIW 483
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 292 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 351
+ S DD L LW P+ ++ H A ++ V ++P D +I + S D S++++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIIASASFDKSIKLW 399
Query: 352 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 366 PLARMTGHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 422
Query: 330 DWNPLDDNLILTGSADNSVRMFD--RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 387
W+ D L+++GS+D++++++D + LT++ GH+ V V WSPD V
Sbjct: 423 AWSA-DSRLLVSGSSDSTLKVWDVKAQKLTTD--------LPGHADEVYAVDWSPDGQRV 473
Query: 388 FGSSAEDGLLNIW 400
S +D L IW
Sbjct: 474 -ASGGKDKCLRIW 485
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 292 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 351
+ S DD L LW P+ ++ H A ++ V ++P D ++ + S D S++++
Sbjct: 344 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 401
Query: 352 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 402 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 444
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 62/259 (23%), Positives = 113/259 (43%)
Query: 167 IWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVL----SGGKDKSVVL 222
IW +E + + ++G T+ D+ +DN L + +L + ++K L
Sbjct: 125 IWSLEGK-SIMTIVGHTDVVKDVAWV-KKDNLSCLLLSSSMDQTILLWEWNVERNKVKAL 182
Query: 223 WSIQDH---ITSSATDPATAK-SAGSSGSIIK-QSPKPGDGNDKAADGPSVGPR------ 271
+ H + S A D K +GS ++K S P D D+ + P+ PR
Sbjct: 183 HCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSAVPTDEEDELEE-PTNRPRKKQKTE 241
Query: 272 --GI-------YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH 322
G+ +GH++ + V + S A+E CS D + +WD G+ +K
Sbjct: 242 QLGLTRTPIVTLSGHKEAISSVLW--SDAEEICSASWDHTIRVWDVESGS---LKSTLTG 296
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP 382
+ +C+ ++PL L +GS D +R++D R T +G ++ H+ V ++WSP
Sbjct: 297 NKVFNCISYSPLCKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSLKWSP 352
Query: 383 DKSSVFGSSAEDGLLNIWD 401
S + D ++ +WD
Sbjct: 353 THEQQLISGSLDNIVKLWD 371
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 134 (52.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH + + V + S A E CS D + +WD G +K + +C+ ++PL
Sbjct: 254 SGHTEAISSVLW--SDADEVCSASWDHTVRVWDVESGG---LKSTLTGNKVFNCISYSPL 308
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
L +GS D +R++D R T +G ++ H+ V V+WSP S + D
Sbjct: 309 CKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPTHDQQLISGSLD 364
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 365 NMVKLWD 371
Score = 111 (44.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 32/134 (23%), Positives = 59/134 (44%)
Query: 264 DGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVE-KAH 322
D S G + G++ +++ P + S D + LWD R ++ + +H
Sbjct: 284 DVESGGLKSTLTGNK-VFNCISYSPL-CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSH 341
Query: 323 DADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP 382
+ V W+P D +++GS DN V+++D R+ + P+ H VL V W+
Sbjct: 342 TGWVTSVKWSPTHDQQLISGSLDNMVKLWDTRSCKA-----PLYDLAAHEDKVLSVDWT- 395
Query: 383 DKSSVFGSSAEDGL 396
D + A++ L
Sbjct: 396 DTGLLLSGGADNKL 409
Score = 49 (22.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 208 EPYVLSGGKDKSVVLWSIQ 226
E ++LSG DK+ +WS++
Sbjct: 111 EEWILSGSYDKTSRIWSLE 129
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 207
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 208 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 261
Query: 395 GLLNIWDYEKVGKKVEQGPRTTNYPA 420
++ +WD G+++ T PA
Sbjct: 262 NVI-MWD-PYTGERLRSLHHTQVDPA 285
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 209
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 210 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 263
Query: 395 GLLNIWDYEKVGKKVEQGPRTTNYPA 420
++ +WD G+++ T PA
Sbjct: 264 NVI-MWD-PYTGERLRSLHHTQVDPA 287
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P GH+ + V F P S + S D + LWD R G + + H A ++ +
Sbjct: 364 PLARMTGHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQI 420
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
W+ D L+++GS+D++++++D + + + + + GH+ V V WSPD V
Sbjct: 421 AWSA-DSRLLVSGSSDSTLKVWD---VKAQKLATDL---PGHADEVYAVDWSPDGQRV-A 472
Query: 390 SSAEDGLLNIW 400
S +D L IW
Sbjct: 473 SGGKDKCLRIW 483
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 292 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 351
+ S DD L LW P+ ++ H A ++ V ++P D ++ + S D S++++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 399
Query: 352 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 167 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 224
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 225 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 278
Query: 395 GLLNIWDYEKVGKKVEQGPRTTNYPA 420
++ +WD G+++ T PA
Sbjct: 279 NVI-MWD-PYTGERLRSLHHTQVDPA 302
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 64/258 (24%), Positives = 112/258 (43%)
Query: 167 IWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVL----SGGKDKSVVL 222
IW +E + + ++G T+ D+ +D+ L + VL + K+K L
Sbjct: 125 IWSLEGK-SIMTIVGHTDVVKDVAWV-KKDSLSCLLLTASMDQTVLLWEWNVEKNKVKAL 182
Query: 223 WSIQDH---ITSSATDPATAK-SAGSSGSIIK-QSPKPGDGNDK---AADGP-------S 267
+ H + + A D + AK +GS ++K S P D D+ A + P
Sbjct: 183 HCCRGHAGSVDAIAVDSSGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQ 242
Query: 268 VG----PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 323
+G P +GH + + V + S A+E CS D + +WD G +K +
Sbjct: 243 LGLTRTPLVTLSGHTEAISSVLW--SDAEEICSASWDHTIRVWDVESGG---LKSTLTGN 297
Query: 324 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 383
+C+ ++PL L +GS D +R++D R T +G ++ H+ V V+WSP
Sbjct: 298 KVFNCISYSPLCKRLA-SGSTDRHIRLWDPR--TKDGSLVSLS-LTSHTGWVTSVKWSPT 353
Query: 384 KSSVFGSSAEDGLLNIWD 401
S + D ++ +WD
Sbjct: 354 HEQQLISGSLDNIVKLWD 371
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 56/222 (25%), Positives = 93/222 (41%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ----DHITSSATDPATAKSAGSSG 246
L GH+ A +++ + S D++V +W + H +D +
Sbjct: 292 LEGHEA-AVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS 350
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ + D K D + + GH D V V F S Q S DDS + +W
Sbjct: 351 RLLASA---SDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS-QLLASASDDSTVKIW 406
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
D GT + + H + V ++ D L+ + S D++V+++D G GS +
Sbjct: 407 DT--GTGSLQHTLEGHRDWVRSVIFSH-DSQLLASASDDSTVKIWD------TGTGSLQH 457
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 408
EGH V V +S D S + S+++D + IWD EK K
Sbjct: 458 TLEGHRDWVRSVIFSHD-SRLLASASDDRTVRIWDTEKGSHK 498
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 57/218 (26%), Positives = 89/218 (40%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-----SIQDHITSSATDPATAKSAGSS 245
L GH D + + +L+ D +V +W S+Q H D +
Sbjct: 334 LEGHSDLVRSVIFSHDSR--LLASASDSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHD 390
Query: 246 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
++ + D K D + + GH D V V F S Q S DDS + +
Sbjct: 391 SQLLASASD--DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS-QLLASASDDSTVKI 447
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD GT + + H + V ++ D L+ + S D +VR++D GS
Sbjct: 448 WDT--GTGSLQHTLEGHRDWVRSVIFSH-DSRLLASASDDRTVRIWDTEK------GSHK 498
Query: 366 NKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
+ EGHS+ V V +S D S + S++ D + IWD E
Sbjct: 499 HTLEGHSSLVTSVSFSHD-SRLLASASNDQTVRIWDIE 535
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 76/283 (26%), Positives = 123/283 (43%)
Query: 110 KPRVAAAEHISQFNE----EARSPFVKKHKTII-HPGEVNRIRELPQNTKIVATHTDSPD 164
KP HI N+ + + K ++ H G V R LP ++ +++ D+
Sbjct: 304 KPHQIDVSHIHLINDTLEVDEEDRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDT-S 362
Query: 165 VLIWDVEAQPNRHAVLGATNSRP--DLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVL 222
+ WD+E+ N VL ++ P DL ++ H + FA A + S D++ L
Sbjct: 363 IRYWDLESFTN--TVLYQGHAYPVWDLDISPH--SLFFASASYDHTARLWSF--DRTYPL 416
Query: 223 WSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVE 282
H+ + D K +S + S A G SV ++ GH V
Sbjct: 417 RIYAGHL--AGVD--CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR---LFTGHCGPVR 469
Query: 283 DVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTG 342
+ F P+ Q S G+D L LWD GT + K H D+ V ++ LD ++I +
Sbjct: 470 CLAFSPNG-QYLVSAGEDQLLKLWDLASGT--LYKDLHGHTDDITSVTFS-LDSSVIASA 525
Query: 343 SADNSVRMFD---RRNLT-SNGVGSPI-NKFEGHSAAVLCVQW 380
S DNSVR++D + N T ++G S + + G + VL VQ+
Sbjct: 526 SMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQF 568
Score = 125 (49.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGD-DSCLILWDARVGTSPVIKVEKAHDADLHC 328
P IY GH V+ V F P+S + + G D + LW A+ G S +++ H + C
Sbjct: 415 PLRIYAGHLAGVDCVKFHPNS--NYLATGSTDKTVRLWSAQQGNS--VRLFTGHCGPVRC 470
Query: 329 VDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVF 388
+ ++P L+ G D ++++D L S G+ GH+ + V +S D SSV
Sbjct: 471 LAFSPNGQYLVSAGE-DQLLKLWD---LAS---GTLYKDLHGHTDDITSVTFSLD-SSVI 522
Query: 389 GSSAEDGLLNIWD 401
S++ D + IWD
Sbjct: 523 ASASMDNSVRIWD 535
Score = 37 (18.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 143 VNRIRELPQNTKIVATHTDSPDVLIWDVEAQ 173
+N P N K++AT ++ + +W + ++
Sbjct: 271 LNTAEASPDN-KLLATGLNNSSIKLWSLTSK 300
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 75/295 (25%), Positives = 116/295 (39%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNA 198
H + ++R P I + D IWD E T + D L GH
Sbjct: 179 HSQPIAQVRISPNGRWIASASADGT-ARIWDAE-----------TGAHIDT-LVGHMAGV 225
Query: 199 EFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDG 258
LA P + +G DK++ LW D IT+ +PA A ++ G
Sbjct: 226 S-CLAWSPDSGTLATGSDDKAIRLW---DRITA---EPAHAVGTQDGDDDAERGRTHGGT 278
Query: 259 NDKAADGPSVG----P-RGIYN---GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARV 310
A G VG P RG GH + V + F P S D + LWD R
Sbjct: 279 RISGASGIGVGGGGGPARGTRRPLLGHHNYVYCLAFSPKG-NILASGSYDEAVFLWDVRA 337
Query: 311 GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEG 370
G +++ AH + +D+ D L+++ S D +R++D T + + +++
Sbjct: 338 GR--LMRSLPAHSDPVSGIDFCR-DGTLVVSCSTDGLIRIWD--TATGQCLRTLVHE--- 389
Query: 371 HSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY----EKVGKKVEQGPRTTNYPAG 421
+ AV V +SP+ + + D + +WDY KV KK QG T + G
Sbjct: 390 DNPAVTNVCFSPNGRYILAFNL-DSCIRLWDYIAHPSKV-KKTYQGHVNTGFSIG 442
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 137 (53.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
+ GH+ +VE V+F P S Q S G D I+W+ + G + V H + D++
Sbjct: 105 VLKGHQRSVETVSFSPDSKQ-LASGGWDKRAIVWEVQSGRRVHLLV--GHCDSIQSSDFS 161
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
P D+L TGS D++V ++D R S V S N EGH+ + C+ +S S + S +
Sbjct: 162 PTSDSLA-TGSWDSTVHIWDLR--ASTPVVSYHN-LEGHTGNISCLCYSA--SGLLASGS 215
Query: 393 EDGLLNIW 400
D + +W
Sbjct: 216 WDKTICVW 223
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 134 (52.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 49/215 (22%), Positives = 91/215 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSATD--PATAKSAGSSG 246
ILTGH + L + E +++G D +V +W + + ++ A ++G
Sbjct: 297 ILTGHTGSV---LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 353
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 354 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 410
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
+ T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 411 NT--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 459
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
EGH V C+++ +K V G A DG + +WD
Sbjct: 460 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWD 491
Score = 52 (23.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 57 WLANHNLV--WPSLSCRWGPQLEQAT----YKNRQRLYLSEQTDGSVPNTLVIANCEVVK 110
WL +L PSL C + P T Y + RL L+++T + NC V K
Sbjct: 9 WLGCSSLADSMPSLRCLYNPGTGALTAFQTYNSCARLCLNQETVCLASTAMKTENC-VAK 67
Query: 111 PRVA 114
++A
Sbjct: 68 TKLA 71
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 66/266 (24%), Positives = 104/266 (39%)
Query: 155 IVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSG 214
I HTD +V DVE PN+ AV +L GH+ F A P + SG
Sbjct: 141 IANNHTDMMEV-DGDVEIPPNK-AV----------VLRGHESEV-FICAWNPVSDLLASG 187
Query: 215 GKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 274
D + +W++ ++ TS +T G + S K D ++G + G Y
Sbjct: 188 SGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP-SNKDVTSLDWNSEGTLLAT-GSY 245
Query: 275 NGHEDT-VEDVTFCPSSAQE----FC-----------SVGDDSCLILWDARVGTSPVIKV 318
+G +D + Q F S G D I+WDA G + ++
Sbjct: 246 DGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK--QL 303
Query: 319 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 378
H A VDW +N + S D + ++ G PI F+GH+ V +
Sbjct: 304 FPFHSAPALDVDWQ--SNNTFASCSTDMCI------HVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 379 QWSPDKSSVFGSSAEDGLLNIWDYEK 404
+W P ++ S ++D L IW ++
Sbjct: 356 KWDPT-GNLLASCSDDMTLKIWSMKQ 380
>UNIPROTKB|A8XL02 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 EMBL:HE600904 HAMAP:MF_03029
ProteinModelPortal:A8XL02 STRING:A8XL02 EnsemblMetazoa:CBG14922
WormBase:CBG14922 HOGENOM:HOG000154844 Uniprot:A8XL02
Length = 446
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 187 PDLILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAG- 243
P + + GH+D ++ CP + + S D +VV W ++ S P + S
Sbjct: 278 PMVTIGGHRDKVS-SVVWCPWKSGHAFSCSWDHTVVQWDLELAGEVSRIKGPKSFTSIDI 336
Query: 244 --SSGSIIKQSPK--PGDGNDKAADGPSVGPRGIYNGHEDT-VEDVTFCPSSAQEFCSVG 298
+S +I P + K DG V + + GH++ VE V + P +F SV
Sbjct: 337 HPTSNLLISSCTDAIPRLYDPKNRDGAMV--KQSFIGHQNGWVESVKWNPVDENQFVSVS 394
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D +WD R S + + H+ + C WN + LI TGSAD S+++F+
Sbjct: 395 TDKTAKMWDVRSSKSSLFDIH-GHEDRILCAAWN---EGLIATGSADCSIKIFE 444
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 52/216 (24%), Positives = 89/216 (41%)
Query: 189 LILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI 248
++ GH+ E +++ +SG D ++ +W++ +D AT S
Sbjct: 212 IVFRGHERAVE-CVSVNSDATRAISGSVDTNLKVWNLDP------SDEATIYEKEEEESS 264
Query: 249 IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA 308
K+ K D K P GH D V V +CP + S D ++ WD
Sbjct: 265 AKKKRKK-DTRTKV-------PMVTIGGHRDKVSSVVWCPWKSGHAFSCSWDHTVVQWDL 316
Query: 309 RV-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
+ G IK K+ + +D +P NL+++ D R++D +N G+ + +
Sbjct: 317 ELAGEVSRIKGPKSFTS----IDIHPTS-NLLISSCTDAIPRLYDPKNRD----GAMVKQ 367
Query: 368 -FEGHSAA-VLCVQWSPDKSSVFGSSAEDGLLNIWD 401
F GH V V+W+P + F S + D +WD
Sbjct: 368 SFIGHQNGWVESVKWNPVDENQFVSVSTDKTAKMWD 403
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 147 (56.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 274 YNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVEKAHDADLHCVDWN 332
Y HE V F + S G D C + +W R S VI ++ A++ CV +N
Sbjct: 459 YEEHEKRAWSVDFSRTEPSMLVS-GSDDCKVKVWCTRQEAS-VINIDMK--ANICCVKYN 514
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
P N I GSAD+ + +D RN++ P++ F GH AV V++ + S++
Sbjct: 515 PGSSNYIAVGSADHHIHYYDLRNISQ-----PLHVFSGHKKAVSYVKFLSNNE--LASAS 567
Query: 393 EDGLLNIWD 401
D L +WD
Sbjct: 568 TDSTLRLWD 576
Score = 40 (19.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 20/104 (19%), Positives = 42/104 (40%)
Query: 78 QATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHI-SQFNEEARSPFVK--KH 134
Q Y ++R L++Q + N + E +A + + + F +R + +H
Sbjct: 306 QECYLQKRR-QLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEIRH 364
Query: 135 KTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHA 178
I H + E ++ ++ AT S + ++D + N A
Sbjct: 365 GDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPA 408
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 65/250 (26%), Positives = 101/250 (40%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 77 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 135
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 136 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 193
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q + GD +C LWD G +++ H AD+ C+D
Sbjct: 194 ----HTNYLSACSFTNSDMQILTASGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLA 246
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G I FE H + + V++ P F S
Sbjct: 247 PSETGNTFVSGGCDKKAMVWDMRS------GQCIQSFETHDSDINSVRYYPS-GDAFASG 299
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 300 SDDATCRLYD 309
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 76/297 (25%), Positives = 118/297 (39%)
Query: 125 EARSPFVKKHKTII--HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAV--- 179
EA FV K + + H +V + +IV++ D V++WD HAV
Sbjct: 88 EALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGK-VIVWDSFTTNKEHAVTMP 146
Query: 180 ---LGATNSRPD--LILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT 234
+ A P I G DN C P ++ + S+ H T
Sbjct: 147 CTWVMACAYAPSGCAIACGGLDNK------CSVYPLTFDKNENMAAKKKSVAMH-----T 195
Query: 235 DPATAKS-AGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPS-SAQ 292
+ +A S S I+ S GDG D S ++GH V + PS +
Sbjct: 196 NYLSACSFTNSDMQILTAS---GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 252
Query: 293 EFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
F S G D ++WD R G I+ + HD+D++ V + P D +GS D + R++D
Sbjct: 253 TFVSGGCDKKAMVWDMRSGQC--IQSFETHDSDINSVRYYPSGD-AFASGSDDATCRLYD 309
Query: 353 RRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 409
R + S + G S+ V +S +F + D +N+WD K G +V
Sbjct: 310 LRADREVAIYSKESIIFGASS----VDFSLSGRLLF-AGYNDYTINVWDVLK-GSRV 360
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 65/250 (26%), Positives = 101/250 (40%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 35 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 93
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 94 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 151
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q + GD +C LWD G +++ H AD+ C+D
Sbjct: 152 ----HTNYLSACSFTNSDMQILTASGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLA 204
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G + FE H + V V++ P F S
Sbjct: 205 PSETGNTFVSGGCDKKAMVWDMRS------GQCVQAFETHESDVNSVRYYPS-GDAFASG 257
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 258 SDDATCRLYD 267
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 145 (56.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 40/147 (27%), Positives = 65/147 (44%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
+ +GH + D+ F P + D+ + WD R P A V WN
Sbjct: 109 VLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQ-VKWN 167
Query: 333 PLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSA 392
D N +L S N + ++D R G +P+ +GH ++V + ++ K S SS+
Sbjct: 168 YKDPN-VLASSHGNDIFVWDLRK----G-STPLCSLKGHVSSVNSIDFNRFKYSEIMSSS 221
Query: 393 EDGLLNIWDYEKVGKKVEQGPRTTNYP 419
DG + WDY K + ++ TTN+P
Sbjct: 222 NDGTVKFWDYSKSTTESKRTV-TTNFP 247
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 207
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 208 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 261
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 262 NVI-MWD 267
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 207
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 208 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 261
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 262 SVI-MWD 267
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 209
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 210 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 263
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 264 NVI-MWD 269
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH+D V D++F PS + S D L +WD I+V H ++C +P
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISP- 209
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D +++ + + + SV ++ R+ T I K EGH ++V+ +SPD + + +S +
Sbjct: 210 DCSMLCSAAGEKSVFLWSMRSYTL------IRKLEGHQSSVVSCDFSPDSALLVTASYDT 263
Query: 395 GLLNIWD 401
++ +WD
Sbjct: 264 NVI-MWD 269
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 144 (55.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH + V V + ++ CS D + LWD +G IK E + + ++PL+
Sbjct: 259 GHREFVSGVQWIDNTTIATCSW--DHTIKLWDLSMGG---IKTEFTGNKSFFDLSYSPLN 313
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
+I+T S D ++R++D R+ N V N + GHS V +WS +F S A D
Sbjct: 314 -GMIITASPDKNLRLYDPRSKHGNFVK---NTYLGHSQWVQTCRWSTTNEYLFVSGAYDN 369
Query: 396 LLNIWDY 402
+ +WDY
Sbjct: 370 RVKLWDY 376
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 65/237 (27%), Positives = 99/237 (41%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQ-----PN--RHAVLGATNSR-PDLI 190
H V I P T++ + D+ + IW E Q P+ + A L N R P +
Sbjct: 198 HERGVGCIAVNPAKTQMASGSMDTM-LKIWSTELQADKGEPSATKKAKLEQDNVRTPVVT 256
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAGSS---G 246
L GH++ + T + + D ++ LW + I + T + S G
Sbjct: 257 LAGHREFVSGVQWIDNTT--IATCSWDHTIKLWDLSMGGIKTEFTGNKSFFDLSYSPLNG 314
Query: 247 SIIKQSPKPGDGNDKAADGPSV-GP--RGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCL 303
II SP D N + D S G + Y GH V+ + ++ F S D+ +
Sbjct: 315 MIITASP---DKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDNRV 371
Query: 304 ILWDARVGTSPVIKVEKAHDADLHCVDW-NPLDDNLILTGSADNSVRMFDRRNLTSN 359
LWD R +P+ ++ D L C DW NP IL+G +DN+VR+F R N
Sbjct: 372 KLWDYRSPKAPIFELIGHEDKVLAC-DWSNP---KYILSGGSDNAVRVFKSRIAVDN 424
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 199 EFALAMCPTEPYVLSGGKDKSVVLWS 224
++ A+ + ++L+G D +V LW+
Sbjct: 112 DWVSAVQAKDGWILTGTYDNTVNLWN 137
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 226 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 282
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 283 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 339
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 340 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 388
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 389 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 422
>CGD|CAL0000686 [details] [associations]
symbol:PEX7 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;ISO] [GO:0016560
"protein import into peroxisome matrix, docking" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000686 GO:GO:0005829 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/214 (28%), Positives = 92/214 (42%)
Query: 212 LSGGKDKSVVLWSI---QDHIT--SSATDPAT--AKSAGSSGSIIKQSPKPGDGNDKAAD 264
+SG D ++ LWS Q +T S+ D +T A +AGS+ + P A
Sbjct: 121 VSGSWDGNIKLWSPNRPQSLLTLNSNVMDYSTRVAPNAGSASVPLSHQP---------AH 171
Query: 265 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
P + N + + F P S S S + +WD R +P+ AH
Sbjct: 172 QPQQQQQQQVNT-ANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVR-SPNPLQLKFTAHGG 229
Query: 325 -DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT-----------SNGV--G-SPINKFE 369
+ VDWN +I +G D SVR++D R++T ++G G +P+N+
Sbjct: 230 LEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTPLNELI 289
Query: 370 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
GH AV VQWSP S++ D IW+ E
Sbjct: 290 GHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDE 323
>UNIPROTKB|Q59WW3 [details] [associations]
symbol:PEX7 "Potential intraperoxisomal protein receptor
Pex7" species:237561 "Candida albicans SC5314" [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0016560 "protein import into peroxisome matrix,
docking" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000686 GO:GO:0005829
GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 61/214 (28%), Positives = 92/214 (42%)
Query: 212 LSGGKDKSVVLWSI---QDHIT--SSATDPAT--AKSAGSSGSIIKQSPKPGDGNDKAAD 264
+SG D ++ LWS Q +T S+ D +T A +AGS+ + P A
Sbjct: 121 VSGSWDGNIKLWSPNRPQSLLTLNSNVMDYSTRVAPNAGSASVPLSHQP---------AH 171
Query: 265 GPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDA 324
P + N + + F P S S S + +WD R +P+ AH
Sbjct: 172 QPQQQQQQQVNT-ANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVR-SPNPLQLKFTAHGG 229
Query: 325 -DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLT-----------SNGV--G-SPINKFE 369
+ VDWN +I +G D SVR++D R++T ++G G +P+N+
Sbjct: 230 LEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTPLNELI 289
Query: 370 GHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
GH AV VQWSP S++ D IW+ E
Sbjct: 290 GHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDE 323
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 243 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 356
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 357 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 405
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 406 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 439
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 243 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 356
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 357 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 405
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 406 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 439
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/129 (25%), Positives = 67/129 (51%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+GH + D+ + P ++ S DD + LW+ + IK+ + H + + +
Sbjct: 65 SGHTKGISDIVYSPINSNILASCSDDLTIRLWN--ITQQRCIKLLRKHTYHITTLKFTQ- 121
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
N++++GS+D ++ ++D +TSNG G + HS V + +PD S+ S++ D
Sbjct: 122 KGNILISGSSDETITIWD---ITSNG-GKILTTLAAHSDPVSSIALTPD-DSIIVSASYD 176
Query: 395 GLLNIWDYE 403
GL+ ++D +
Sbjct: 177 GLMRLFDLQ 185
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 134 (52.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDA--RVGTSPVIKV-----EKAHDADLH 327
GH + V + C Q+F G C + +WD G V+ + E+AH+ D++
Sbjct: 430 GHSNAVGSIA-CSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVN 488
Query: 328 CVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSV 387
V +P +D L+ +GS D + +++ +L GV GH V VQ+SP +
Sbjct: 489 SVCVSP-NDKLLASGSQDRTAKLWALSDLRLLGV------CRGHRRGVWSVQFSP-VDQI 540
Query: 388 FGSSAEDGLLNIWDYE 403
GS++ DG + IW +
Sbjct: 541 LGSASADGSVRIWSIQ 556
Score = 56 (24.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 184 NSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD 227
+SR +L H ALA P ++S G+DK +W +Q+
Sbjct: 181 SSRCVCVLESHYSPVT-ALAFSPDGHTLVSSGRDKICSVWDLQE 223
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/131 (29%), Positives = 65/131 (49%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH + + +F P S+ S DS +WD GT P+ + K H + + V ++P +
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGT-PLHTL-KGHTSWVLAVSYSP-N 202
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG-----S 390
+I TGS DN+VR++D + +G+P+ +GH + + W P G S
Sbjct: 203 GAMIATGSMDNTVRIWDAKK--GQALGAPL---KGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 391 SAEDGLLNIWD 401
+++D + IWD
Sbjct: 258 ASKDSTVRIWD 268
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 37/125 (29%), Positives = 57/125 (45%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH+ V VTF P A S G D+ + LW+ R G I + H ++ ++ D
Sbjct: 403 GHQKEVNHVTFSPDMAY-IASAGFDNHVKLWNGRDGK--FITTLRGHVGAVYQCCFSA-D 458
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
L+++ S D ++++++ R G GH V V WSPD V GS +D
Sbjct: 459 SRLLVSSSKDTTLKVWNVRT------GKLSEDLPGHKDEVFAVDWSPDGQKV-GSGGKDK 511
Query: 396 LLNIW 400
+ IW
Sbjct: 512 AIRIW 516
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 54/233 (23%), Positives = 99/233 (42%)
Query: 184 NSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSATDPATAK 240
+ R D++L+GH+ + + T + + D+++ +W+ Q T SA
Sbjct: 271 SKRADIVLSGHKGSVT-CVRWGGTGK-IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNH 328
Query: 241 SAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDD 300
A S+ I++ + G +D V + + T ++ S DD
Sbjct: 329 LALSTDFILRTAYHDHTGKVPESDADKVAM-----AKKRFEKAATINNKIVEKLVSASDD 383
Query: 301 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNG 360
+ LWD + PV ++ H +++ V ++P D I + DN V++++ R+
Sbjct: 384 FTMYLWDPESSSKPVARL-LGHQKEVNHVTFSP-DMAYIASAGFDNHVKLWNGRD----- 436
Query: 361 VGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGP 413
G I GH AV +S D S + SS++D L +W+ + GK E P
Sbjct: 437 -GKFITTLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVWNV-RTGKLSEDLP 486
>DICTYBASE|DDB_G0274279 [details] [associations]
symbol:tssc1 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0274279 GO:GO:0045335 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000151_GR EMBL:AAFI02000012 eggNOG:NOG314403
RefSeq:XP_643981.1 ProteinModelPortal:Q86A97 STRING:Q86A97
PRIDE:Q86A97 EnsemblProtists:DDB0234267 GeneID:8619407
KEGG:ddi:DDB_G0274279 OMA:RINESMD ProtClustDB:CLSZ2729203
Uniprot:Q86A97
Length = 400
Score = 136 (52.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 42/148 (28%), Positives = 68/148 (45%)
Query: 217 DKSVVLWS-IQDHITSSATDP---ATAKSAGS-SGSIIKQSPKPGDGNDKAADGPSVGPR 271
D ++ LWS I D + + S GS + +I Q D N K D +
Sbjct: 162 DSNIRLWSKIDDQNEPTVIKQFGNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKET 221
Query: 272 -GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVD 330
+ H + + D+ F P+ S GDD L +WD R PV K+ H+ +
Sbjct: 222 FSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDPV-KIFSGHNHWIWSAK 280
Query: 331 WNPLDDNLILTGSADNSVRMFDRRNLTS 358
+N D LI+T S+DN+V++++ +L+S
Sbjct: 281 FNRYHDQLIITSSSDNTVKLWNLYSLSS 308
Score = 44 (20.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 365 INKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
I +E H +V + WS + +F S + DG
Sbjct: 353 IKTYEEHEDSVYNISWS-SSNFLFASLSYDG 382
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 260 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 316
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 317 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 373
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 374 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 422
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 423 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 456
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 262 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 318
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 319 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 375
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 376 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 424
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 425 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 458
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 65/250 (26%), Positives = 101/250 (40%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 77 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 135
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 136 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 193
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q + GD +C LWD G +++ H AD+ C+D
Sbjct: 194 ----HTNYLSACSFTNSDMQILTASGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLA 246
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G + FE H + V V++ P F S
Sbjct: 247 PSETGNTFVSGGCDKKAMVWDMRS------GQCVQAFETHESDVNSVRYYPS-GDAFASG 299
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 300 SDDATCRLYD 309
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 263 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 319
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 320 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 376
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 377 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 425
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 426 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 459
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/140 (26%), Positives = 71/140 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT-------SPVIKV---EKAHDA 324
NGH TV ++F ++ + + DD L +W + +P I + HD
Sbjct: 210 NGHSSTVWSISF-NAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDR 268
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMF-DRRNLTSNGVGSPI--NKFEGHSAAVLCVQWS 381
++ W+ D++I +G+ DN++R+F D ++ + +G + K + H V VQWS
Sbjct: 269 TIYSAHWSR--DDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWS 326
Query: 382 PDKSS-VFGSSAEDGLLNIW 400
P + + + S+++DG++ IW
Sbjct: 327 PGEGNRLLASASDDGMVKIW 346
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 143 (55.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
++ GH V + P +F S D + +W +SP +E HD ++C+D+
Sbjct: 137 VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-SSSPNFTLE-GHDKGVNCIDYY 194
Query: 333 PLDDN-LILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
D +++G+ D V+++D +N T + EGH+ V CV + P+ + S
Sbjct: 195 SGGDKPYLISGADDRLVKIWDYQNKTC------VQTLEGHAQNVSCVNFHPELPIIITGS 248
Query: 392 AEDGLLNIW 400
EDG + IW
Sbjct: 249 -EDGTVRIW 256
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 53/220 (24%), Positives = 94/220 (42%)
Query: 191 LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI---TSSATD-PATA-KSAGSS 245
LT D + ++ + P+EP++L+ + SV +W+ + T D P A K
Sbjct: 11 LTARSDRVK-SVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARK 69
Query: 246 GSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLIL 305
+I + D + + ++ ++ H D + + P+ S DD + L
Sbjct: 70 NWVITGAD---DMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTS-SDDMLIKL 125
Query: 306 WDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPI 365
WD S +V + H + + NP D+N + S D +++++ G SP
Sbjct: 126 WDWEKKWS-CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL------GSSSPN 178
Query: 366 NKFEGHSAAVLCVQW--SPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+ + DK + S A+D L+ IWDY+
Sbjct: 179 FTLEGHDKGVNCIDYYSGGDKPYLI-SGADDRLVKIWDYQ 217
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 275 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 388
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 389 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 437
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 438 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 471
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 275 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 388
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 389 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 437
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 438 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 471
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 275 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 388
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 389 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 437
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 438 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 471
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 64/250 (25%), Positives = 101/250 (40%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 35 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 93
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 94 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 151
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q + GD +C LWD G +++ H AD+ C+D
Sbjct: 152 ----HTNYLSACSFTNSDMQILTASGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLA 204
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G + FE H + + V++ P F S
Sbjct: 205 PSETGNTFVSGGCDKKAMVWDMRS------GQCVQAFETHESDINSVRYYPS-GDAFASG 257
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 258 SDDATCRLYD 267
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 143 (55.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 51/217 (23%), Positives = 92/217 (42%)
Query: 193 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQ--DHIT--SSATDPATAKSAGSSGSI 248
GH + + P Y+LS +D + LWS++ ++ P S G
Sbjct: 677 GHSGPV-YGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFY 735
Query: 249 IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVG-DDSCLILWD 307
+ D + + P I+ GH V F P+ + + G +D LW+
Sbjct: 736 FATASH--DRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNI--NYLATGSNDKSARLWE 791
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
+ G +++ H A ++ V ++P D L+ T D SV ++D L++ G + K
Sbjct: 792 IQTGKC--VRIFMGHRAPIYTVAFSP-DGRLLATAGEDTSVILWD---LST---GKKVKK 842
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
+GH+ V + +S D S+ S + D + +WD +K
Sbjct: 843 MDGHTKCVYSLDFSCD-GSILASGSSDCTVRLWDVKK 878
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 138 (53.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/132 (28%), Positives = 61/132 (46%)
Query: 270 PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCV 329
P +GH + + V + S A+E CS D + LWDA G +K + + V
Sbjct: 237 PLATLSGHTEAISSVLW--SDAEEICSASWDHTIKLWDAETGG---LKSTLTGNKVFNSV 291
Query: 330 DWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFG 389
++PL L +GS D +R++D R+ + V + H+ V V+WSP
Sbjct: 292 SYSPLCRRLA-SGSTDRHIRLWDPRSKDGSLV---LLSLTSHTGWVTSVKWSPTHEHQLI 347
Query: 390 SSAEDGLLNIWD 401
S + D ++ +WD
Sbjct: 348 SGSLDNIVKLWD 359
Score = 119 (46.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/154 (23%), Positives = 66/154 (42%)
Query: 257 DGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVI 316
D K D + G + G++ V++ P + S D + LWD R ++
Sbjct: 265 DHTIKLWDAETGGLKSTLTGNK-VFNSVSYSPL-CRRLASGSTDRHIRLWDPRSKDGSLV 322
Query: 317 KVE-KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAV 375
+ +H + V W+P ++ +++GS DN V+++D R+ + P+ H V
Sbjct: 323 LLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWDTRSCKA-----PLYDLAAHEDKV 377
Query: 376 LCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKV 409
LCV W+ ++ + S D L + Y V
Sbjct: 378 LCVDWT--EAGLLLSGGADNKLYCYRYPATASDV 409
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/98 (26%), Positives = 36/98 (36%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNA 198
H G V+ + TK + D + IW + A N RP Q
Sbjct: 176 HAGSVDSVAVDCTRTKFCSGSWDKM-LKIWSAVPTDEEDEMEEAAN-RP----RKKQKTE 229
Query: 199 EFALAMCPTEPYVLSGGKDK-SVVLWSIQDHITSSATD 235
+ L P LSG + S VLWS + I S++ D
Sbjct: 230 QLGLTRTPLA--TLSGHTEAISSVLWSDAEEICSASWD 265
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 59/228 (25%), Positives = 94/228 (41%)
Query: 193 GHQDNAEFALAMCPTEPY---VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 249
GH D PT+P ++S +DK +++W+I S A G S +I
Sbjct: 19 GHSDWV--TSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIN 76
Query: 250 KQS-PKPG----DGN-DKAAD--GPSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDD 300
S G G+ D + S+G + GH V V+F P + Q S D
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ-IVSASRD 135
Query: 301 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSN 359
+ LW+ I ++ H + CV ++P + I+ D V++++ +N N
Sbjct: 136 KTIKLWNTLAQCKYTI-TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 360 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 407
EGH+ + V SPD S+ S +DG+ +WD K GK
Sbjct: 195 ------KNLEGHTGVLNTVTISPD-GSLCASGGKDGVAKLWDV-KEGK 234
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 59/228 (25%), Positives = 94/228 (41%)
Query: 193 GHQDNAEFALAMCPTEPY---VLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 249
GH D PT+P ++S +DK +++W+I S A G S +I
Sbjct: 19 GHSDWV--TSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIN 76
Query: 250 KQS-PKPG----DGN-DKAAD--GPSVGPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDD 300
S G G+ D + S+G + GH V V+F P + Q S D
Sbjct: 77 DVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ-IVSASRD 135
Query: 301 SCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA-DNSVRMFDRRNLTSN 359
+ LW+ I ++ H + CV ++P + I+ D V++++ +N N
Sbjct: 136 KTIKLWNTLAQCKYTI-TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLN 194
Query: 360 GVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGK 407
EGH+ + V SPD S+ S +DG+ +WD K GK
Sbjct: 195 ------KNLEGHTGVLNTVTISPD-GSLCASGGKDGVAKLWDV-KEGK 234
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 65/266 (24%), Positives = 110/266 (41%)
Query: 148 ELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPT 207
E+P N + + + L+ + +A + T+ R L H+ FAL
Sbjct: 406 EVPSNKDVTSLDWNCDGSLL--ATGSYDGYARIWKTDGRLASTLGQHKGPI-FALKWNKC 462
Query: 208 EPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKP--GDGNDKAADG 265
Y+LS G DK+ ++W D T T SA + + Q+ + D+
Sbjct: 463 GNYILSAGVDKTTIIW---DASTGQCTQQFAFHSAPAL-DVDWQTNQAFASCSTDQRIHV 518
Query: 266 PSVG---PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAH 322
+G P + GH + V + +CP Q S DD L +W + +AH
Sbjct: 519 CRLGVNEPIKTFKGHTNEVNAIKWCPQG-QLLASCSDDMTLKIWS--MNRDRCCHDLQAH 575
Query: 323 DADLHCVDWNPL-------DDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
+++ + W+P + NLIL + S D++VR++D GS I+ H+
Sbjct: 576 SKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVER------GSCIHTLTKHTEP 629
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIW 400
V V +SPD + S + D ++IW
Sbjct: 630 VYSVAFSPDGKHL-ASGSFDKCVHIW 654
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 59/231 (25%), Positives = 87/231 (37%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSII 249
+L GH+ F A P+ + SG D + +W + D T+S + + G
Sbjct: 350 VLRGHESEV-FICAWNPSRDLLASGSGDSTARIWDMSDANTNS--NQLVLRHCIQKGGAE 406
Query: 250 KQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVE-DVTFCPSSAQE----F------C--- 295
S K D DG S+ G Y+G+ + D + Q F C
Sbjct: 407 VPSNKDVTSLDWNCDG-SLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNY 465
Query: 296 --SVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDR 353
S G D I+WDA G + H A VDW T A S R
Sbjct: 466 ILSAGVDKTTIIWDASTGQCT--QQFAFHSAPALDVDWQ--------TNQAFASCSTDQR 515
Query: 354 RNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
++ GV PI F+GH+ V ++W P + + S ++D L IW +
Sbjct: 516 IHVCRLGVNEPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNR 565
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 75/317 (23%), Positives = 130/317 (41%)
Query: 113 VAAAEHIS-QFNEEARSPFVKKHKTII-HPGEVNRIRELPQNTKIVATHTDSPDVLIWDV 170
+A A+ ++ Q E P+ K + I H G V + P N K A+ + IWD+
Sbjct: 173 LARAQELNMQLKPEWHRPW-KLMRVISGHLGWVRALAVEPDN-KWFASGAGDRTIKIWDL 230
Query: 171 EAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD--- 227
+ R L LTGH LA+ P PY+ S +DK V W ++
Sbjct: 231 ------------ASGRLRLTLTGHISTVR-GLAVSPRHPYLFSCAEDKMVKCWDLETNKV 277
Query: 228 --HITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVT 285
H + T + ++ DG + D + + +GH TV ++
Sbjct: 278 IRHYHGHLSGVYTLALHPTLDVLVTGGR---DGVARVWDMRTRSNIHVLSGHTGTVSELV 334
Query: 286 FCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSAD 345
C + + + DS + +WD G + + V H + + +P + +GSA
Sbjct: 335 -CQEADPQVITGSLDSTVRMWDLAAGKT--MGVLTHHKKGVRALATHPTEFTFA-SGSA- 389
Query: 346 NSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV 405
S++ + G+ + FEGH++ + + S + +VF S A++G ++ WD+ K
Sbjct: 390 GSIKQWKCPE------GAFMQNFEGHNSIINTL--SVNDQNVFFSGADNGSMSFWDW-KT 440
Query: 406 GKKVEQGPRTTNYPAGL 422
G + Q TT P L
Sbjct: 441 GHRF-QSLDTTAQPGSL 456
>WB|WBGene00018893 [details] [associations]
symbol:tag-345 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005654 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035
GO:GO:0040019 GO:GO:0070545 GO:GO:0000463 GO:GO:0007276
InterPro:IPR012972 Pfam:PF08154 EMBL:FO081477 KO:K14863
HAMAP:MF_03029 GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844
PIR:T29587 RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 48/174 (27%), Positives = 76/174 (43%)
Query: 187 PDLILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAG- 243
P + + GH+D A+ CP + S D ++V W ++ S P + S
Sbjct: 271 PMVTIGGHRDKVS-AVEWCPWNSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSFTSIDL 329
Query: 244 --SSGSIIKQSPK--PGDGNDKAADGPSVGPRGIYNGHEDT-VEDVTFCPSSAQEFCSVG 298
S +I P + K DG V + + GH++ VE V + P +F SV
Sbjct: 330 HPKSDLLISSCTDAIPRLYDPKNRDGSMV--KQSFIGHQNGWVEAVKWNPLDTNQFVSVS 387
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D +WD R S + + HD + C WN + LI TGSAD ++++F+
Sbjct: 388 TDKTAKMWDVRSSKSSLFDIH-GHDDRILCATWN---EGLIATGSADCTIKIFE 437
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 189 LILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI 248
LIL GH+ E +++ +SG D ++ +W++ A+D AT
Sbjct: 205 LILRGHERAVE-CVSVNSDSTRAISGSVDTNLKIWNLD------ASDEATTYEKEEE--- 254
Query: 249 IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA 308
++S K + P V GH D V V +CP ++ S D ++ WD
Sbjct: 255 -EESAKKRRKKETKTKVPMV----TIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDL 309
Query: 309 RV-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
+ G IK K+ + +D +P D L+++ D R++D +N GS + +
Sbjct: 310 ELAGEISRIKGPKSFTS----IDLHPKSD-LLISSCTDAIPRLYDPKNRD----GSMVKQ 360
Query: 368 -FEGHSAA-VLCVQWSPDKSSVFGSSAEDGLLNIWD 401
F GH V V+W+P ++ F S + D +WD
Sbjct: 361 SFIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWD 396
>UNIPROTKB|P91343 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6239 "Caenorhabditis elegans" [GO:0070545 "PeBoW complex"
evidence=ISS] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0005654
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040019
GO:GO:0070545 GO:GO:0000463 GO:GO:0007276 InterPro:IPR012972
Pfam:PF08154 EMBL:FO081477 KO:K14863 HAMAP:MF_03029
GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844 PIR:T29587
RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 48/174 (27%), Positives = 76/174 (43%)
Query: 187 PDLILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSIQ-DHITSSATDPATAKSAG- 243
P + + GH+D A+ CP + S D ++V W ++ S P + S
Sbjct: 271 PMVTIGGHRDKVS-AVEWCPWNSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSFTSIDL 329
Query: 244 --SSGSIIKQSPK--PGDGNDKAADGPSVGPRGIYNGHEDT-VEDVTFCPSSAQEFCSVG 298
S +I P + K DG V + + GH++ VE V + P +F SV
Sbjct: 330 HPKSDLLISSCTDAIPRLYDPKNRDGSMV--KQSFIGHQNGWVEAVKWNPLDTNQFVSVS 387
Query: 299 DDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFD 352
D +WD R S + + HD + C WN + LI TGSAD ++++F+
Sbjct: 388 TDKTAKMWDVRSSKSSLFDIH-GHDDRILCATWN---EGLIATGSADCTIKIFE 437
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 189 LILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSATDPATAKSAGSSGSI 248
LIL GH+ E +++ +SG D ++ +W++ A+D AT
Sbjct: 205 LILRGHERAVE-CVSVNSDSTRAISGSVDTNLKIWNLD------ASDEATTYEKEEE--- 254
Query: 249 IKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA 308
++S K + P V GH D V V +CP ++ S D ++ WD
Sbjct: 255 -EESAKKRRKKETKTKVPMV----TIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDL 309
Query: 309 RV-GTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
+ G IK K+ + +D +P D L+++ D R++D +N GS + +
Sbjct: 310 ELAGEISRIKGPKSFTS----IDLHPKSD-LLISSCTDAIPRLYDPKNRD----GSMVKQ 360
Query: 368 -FEGHSAA-VLCVQWSPDKSSVFGSSAEDGLLNIWD 401
F GH V V+W+P ++ F S + D +WD
Sbjct: 361 SFIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWD 396
>UNIPROTKB|Q05BV3 [details] [associations]
symbol:EML5 "Echinoderm microtubule-associated protein-like
5" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0005874 InterPro:IPR005108 Pfam:PF03451
EMBL:AK127024 EMBL:AK128086 EMBL:AL121768 EMBL:AL162171
EMBL:BC032685 EMBL:BC150639 EMBL:AY357725 EMBL:CR933726
IPI:IPI00742831 IPI:IPI00843972 IPI:IPI00923627 IPI:IPI00982557
RefSeq:NP_899243.1 UniGene:Hs.325846 ProteinModelPortal:Q05BV3
SMR:Q05BV3 STRING:Q05BV3 PhosphoSite:Q05BV3 DMDM:215274143
PaxDb:Q05BV3 PRIDE:Q05BV3 Ensembl:ENST00000380664
Ensembl:ENST00000554922 GeneID:161436 KEGG:hsa:161436
UCSC:uc021ryf.1 CTD:161436 GeneCards:GC14M089159 H-InvDB:HIX0026633
H-InvDB:HIX0172351 HGNC:HGNC:18197 neXtProt:NX_Q05BV3
PharmGKB:PA134894613 HOGENOM:HOG000031037 HOVERGEN:HBG107846
InParanoid:Q05BV3 OMA:LMVWTNE GenomeRNAi:161436 NextBio:88068
Bgee:Q05BV3 CleanEx:HS_EML5 Genevestigator:Q05BV3 Uniprot:Q05BV3
Length = 1969
Score = 106 (42.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 185 SRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH 228
++P LI+ GH + +ALA+ PT+P ++G D+SV +WS+ DH
Sbjct: 314 NKPFLIMQGHCEGELWALAVHPTKPLAVTGSDDRSVRIWSLVDH 357
Score = 80 (33.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 322 HDADLHCVDWNPLDDNLILTGSA--DNSVRMFDRRNLTSNGVGSPINKFEGHSA-AVLCV 378
HD D+ C+ +PL D + TG D S+ ++D + P++ +GH V V
Sbjct: 726 HDDDILCLTIHPLKD-YVATGQVGRDPSIHIWDTETI------KPLSILKGHHQYGVSAV 778
Query: 379 QWSPDKSSVFGSSAEDG-LLNIWDYEKVGKKV 409
+S D + +D + +WD++K G+K+
Sbjct: 779 DFSADGKRLASVGIDDSHTVVLWDWKK-GEKL 809
Score = 72 (30.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 264 DGPSVGPRGIYNGHEDT-VEDVTFCPSSAQEFCSVG-DDS-CLILWDARVGTSPVIKVEK 320
D ++ P I GH V V F + + SVG DDS ++LWD + G + + +
Sbjct: 757 DTETIKPLSILKGHHQYGVSAVDFS-ADGKRLASVGIDDSHTVVLWDWKKGEK--LSIAR 813
Query: 321 AHDADLHCVDWNP-LDDNLILTG 342
+ V NP + D LI G
Sbjct: 814 GSKDKIFVVKMNPYVPDKLITAG 836
Score = 68 (29.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
D++ VD N + L+ T +++F L G+ K+ GHSA V V+WS D
Sbjct: 520 DINSVDGNYIGQVLV-TADDYGIIKLFRYPCLRK---GAKFRKYIGHSAHVTNVRWSHDY 575
Query: 385 SSVFGSSAEDGLLNIWDY 402
V D + W +
Sbjct: 576 QWVISIGGADHSVFQWKF 593
Score = 65 (27.9 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 336 DNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
D ++L TG V++F R T G ++ HS V V+W+ D S + D
Sbjct: 1204 DKMVLATGDDLGFVKLF--RYPTKGKFGK-FKRYVAHSTHVTNVRWTYDDSMLVTLGGTD 1260
Query: 395 GLLNIWDYEKVGKKVEQGP 413
L +W E G + E+ P
Sbjct: 1261 MSLMVWTNEMEGYR-EKRP 1278
Score = 45 (20.9 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 337 NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGL 396
+ L+ + D +VR++D + + + +N GH+A +C D ++ + E +
Sbjct: 1707 DFFLSAAEDGTVRLWD---IADKKMLNKVNL--GHAARTVCYSPEGDMVAIGMKNGEFII 1761
Query: 397 LNIWDYEKVGKK 408
L + + GKK
Sbjct: 1762 LLVSSLKIWGKK 1773
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 64/250 (25%), Positives = 101/250 (40%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 77 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 135
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 136 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 193
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q + GD +C LWD G +++ H AD+ C+D
Sbjct: 194 ----HTNYLSACSFTNSDMQILTASGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLA 246
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G + FE H + + V++ P F S
Sbjct: 247 PSETGNTFVSGGCDKKAMVWDMRS------GQCVQAFETHESDINSVRYYPS-GDAFASG 299
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 300 SDDATCRLYD 309
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 63/250 (25%), Positives = 99/250 (39%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 35 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 93
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 94 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 151
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q+ + D LWD G +++ H AD+ C+D
Sbjct: 152 ----HTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLA 205
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G I FE H + + V++ P F S
Sbjct: 206 PSETGNTFVSGGCDKKAMVWDMRS------GQCIQAFETHESDINSVRYYPS-GDAFASG 258
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 259 SDDATCRLYD 268
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 59/227 (25%), Positives = 98/227 (43%)
Query: 213 SGGKDKSVVLWSIQDHIT----SSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSV 268
+G D + +W +Q + S D S +GS+I S D + D
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASR-DKTLRIWDLNKH 186
Query: 269 GPR-GIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLH 327
G + + +GH V + P + CS + + LW R T +I+ + H + +
Sbjct: 187 GKQIQVLSGHLQWVYCCSISPDCSM-LCSAAGEKSVFLWSMRSYT--LIRKLEGHQSSVV 243
Query: 328 CVDWNPLDDNLILTGSADNSVRMFDR------RNLTSNGVGSPINKFEGHSAAVLCVQWS 381
D++P D L++T S D SV M+D R+L + +P++ + H +++ V +S
Sbjct: 244 SCDFSP-DSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFS 302
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAG 428
P+ + A+D LL IW E + V P T N FF H G
Sbjct: 303 PE-GLYLATVADDRLLRIWALE-LKAPVAFAPMT-NGLCCTFFPHGG 346
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 132 (51.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
D V V F + S G D+ ++L+D R T PV KV + +C+ WNP++
Sbjct: 220 DNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNT-PVHKVVTS--LRNNCITWNPMEAFN 276
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
TG+ D++ ++D RNL + ++GH A++ V ++P + S D +
Sbjct: 277 FATGNEDHNGYLYDMRNLQKT-----LKVYKGHVGAIMDVDFAPTGQELVTGSY-DKTIR 330
Query: 399 IW 400
+W
Sbjct: 331 LW 332
Score = 48 (22.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 193 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA 233
GH+D F + SG D + W++ D + +++
Sbjct: 65 GHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETAS 105
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 132 (51.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 279 DTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNL 338
D V V F + S G D+ ++L+D R T PV KV + +C+ WNP++
Sbjct: 220 DNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNT-PVHKVVTS--LRNNCITWNPMEAFN 276
Query: 339 ILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLN 398
TG+ D++ ++D RNL + ++GH A++ V ++P + S D +
Sbjct: 277 FATGNEDHNGYLYDMRNLQKT-----LKVYKGHVGAIMDVDFAPTGQELVTGSY-DKTIR 330
Query: 399 IW 400
+W
Sbjct: 331 LW 332
Score = 48 (22.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 193 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSA 233
GH+D F + SG D + W++ D + +++
Sbjct: 65 GHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETAS 105
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH+ + V F P S + S D + LWD R G + + H A ++ + W+ D
Sbjct: 370 GHQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGK--YLASLRGHVAAVYQIAWSA-D 425
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDG 395
L+++GS+D++++++D + + P GH+ V V WSPD V S +D
Sbjct: 426 SRLLVSGSSDSTLKVWDVK-AQKLAMDLP-----GHADEVYAVDWSPDGQRV-ASGGKDK 478
Query: 396 LLNIW 400
L IW
Sbjct: 479 CLRIW 483
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 292 QEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMF 351
+ S DD L LW P+ ++ H A ++ V ++P D ++ + S D S++++
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLTRMT-GHQALINQVLFSP-DSRIVASASFDKSIKLW 399
Query: 352 DRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 401
D R G + GH AAV + WS D S + S + D L +WD
Sbjct: 400 DGRT------GKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWD 442
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 67/270 (24%), Positives = 111/270 (41%)
Query: 193 GHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITS----SATDPATAKSAGSSGSI 248
GH+D A P + +G DKS+++W++ + TD T + SGS+
Sbjct: 16 GHKDVISCA-DFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSL 74
Query: 249 IKQSPKPGDGNDKAADGPSV-GPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWD 307
+ S + D + PS+ G ++ H +V V F Q + DD + +W
Sbjct: 75 VASSSR--DQTVRLWT-PSIKGESTVFKAHTASVRSVHFS-RDGQRLVTASDDKSVKVWG 130
Query: 308 ARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINK 367
V + H + C ++P D LI + D +VR++D TS+ IN
Sbjct: 131 --VERKKFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWD----TSSH--QCINI 181
Query: 368 FEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLF-FQH 426
F + + V ++ + + SS D + IWD K+ Q + N F F
Sbjct: 182 FTDYGGSATFVDFNSSGTCI-ASSGADNTIKIWDIRT--NKLIQHYKVHNAGVNCFSFHP 238
Query: 427 AGH-----SPSSSIKFV-LRESCLVDNNHG 450
+G+ S S+IK + L E L+ HG
Sbjct: 239 SGNYLISGSSDSTIKILDLLEGRLIYTLHG 268
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/196 (23%), Positives = 84/196 (42%)
Query: 211 VLSGGKDKSVVLWSIQD----HITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGP 266
+++ DKSV +W ++ + + T+ G +I G+D+
Sbjct: 117 LVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASC-----GDDRTVRLW 171
Query: 267 SVGPRGIYNGHEDTVEDVTFCPSSAQEFC--SVGDDSCLILWDARVGTSPVIKVEKAHDA 324
N D TF ++ C S G D+ + +WD R T+ +I+ K H+A
Sbjct: 172 DTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR--TNKLIQHYKVHNA 229
Query: 325 DLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDK 384
++C ++P N +++GS+D+++++ D G I GH VL V +S D
Sbjct: 230 GVNCFSFHP-SGNYLISGSSDSTIKILDLLE------GRLIYTLHGHKGPVLTVTFSRD- 281
Query: 385 SSVFGSSAEDGLLNIW 400
+F S D + +W
Sbjct: 282 GDLFASGGADSQVLMW 297
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 137 (53.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 48/166 (28%), Positives = 71/166 (42%)
Query: 240 KSAGSSGSIIKQSPKPGDGN-----DKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEF 294
K+A G I+++ D D DG R I GH+ V VTF P +
Sbjct: 372 KAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMI--GHQKQVNHVTFSPDGSM-I 428
Query: 295 CSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRR 354
S G D+ LW+AR G I + H A ++ ++ D L++T S D ++++++ R
Sbjct: 429 ASAGWDNATKLWNARDGK--FINTLRGHVAPVYQCSFSA-DSRLLVTASKDTTLKVWNVR 485
Query: 355 NLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIW 400
G GH V V WSPD V GS D + +W
Sbjct: 486 T------GKLATDLPGHEDEVYGVDWSPDGQRV-GSGGRDKAVRLW 524
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 322 HDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWS 381
H + C ++P + TGS DN+ R++D G+P + +GH+ VL V WS
Sbjct: 151 HGEPILCAQFSPASSARLATGSGDNTARIWDAET------GTPKHTLKGHAGWVLGVSWS 204
Query: 382 PDKSSVFGSSAEDGLLNIWDYEKVGKKV 409
PD + + + + D + IWD E GK+V
Sbjct: 205 PDGTRL-ATCSMDKTVRIWDPE-TGKQV 230
Score = 119 (46.9 bits), Expect = 0.00058, P = 0.00058
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLD 335
GH + + F P+S+ + D+ +WDA GT P + K H + V W+P D
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGT-PKHTL-KGHAGWVLGVSWSP-D 206
Query: 336 DNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSP-----DKSSVFGS 390
+ T S D +VR++D T VGS + +GH+ V + W P D + S
Sbjct: 207 GTRLATCSMDKTVRIWDPE--TGKQVGSEL---KGHAKWVQGIAWEPLHLWRDGTPRLVS 261
Query: 391 SAEDGLLNIW 400
+++D IW
Sbjct: 262 ASKDFTARIW 271
Score = 45 (20.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 115 AAEHISQFNEEARSPFVKKHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQP 174
AAE + F +A S H+ H + + P ++ +AT + IWD E
Sbjct: 129 AAEPQAVFKVQAVSRLA--HRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGT 186
Query: 175 NRHAVLG 181
+H + G
Sbjct: 187 PKHTLKG 193
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/109 (23%), Positives = 40/109 (36%)
Query: 133 KHKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILT 192
KH H G V + P T++ D V IWD E T + L
Sbjct: 188 KHTLKGHAGWVLGVSWSPDGTRLATCSMDKT-VRIWDPE-----------TGKQVGSELK 235
Query: 193 GHQDNAEFALAMCPTE------PYVLSGGKDKSVVLWSIQ----DHITS 231
GH + +A P P ++S KD + +W++ +H+ S
Sbjct: 236 GHAKWVQ-GIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLS 283
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 135 (52.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/233 (21%), Positives = 97/233 (41%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH-------ITSSATDPATAKSA 242
+L GH++ + +A P+ + + +DKSV +W + + + +S T
Sbjct: 100 VLEGHENEVK-CVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVW 158
Query: 243 GSSGSIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSC 302
+ ++ + + R GH TV +TF PS Q S DD
Sbjct: 159 HPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSG-QRLASCSDDRT 217
Query: 303 LILW-DARVGTSP------VIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRN 355
+ +W + + G V + H ++ + W PL L T D+ VR+F + +
Sbjct: 218 VKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALA-TACGDDGVRVF-KED 275
Query: 356 LTSNGVGSPINKF-----EGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
T++ P+ + HS V C+ W P ++ + S +++G + +W+Y+
Sbjct: 276 ETADP-DQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVWNYQ 327
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 201 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 255
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 316 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 428
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 201 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 255
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVF-SASP 284
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 316 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 428
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 201 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 255
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 316 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 428
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 66/266 (24%), Positives = 103/266 (38%)
Query: 155 IVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSG 214
I HTD +V DVE PN+ AV +L GH+ F A P + SG
Sbjct: 141 IANNHTDMMEV-DGDVEIPPNK-AV----------VLRGHESEV-FICAWNPVSDLLASG 187
Query: 215 GKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 274
D + +W++ ++ TS +T G + S K D ++G + G Y
Sbjct: 188 SGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP-SNKDVTSLDWNSEGTLLAT-GSY 245
Query: 275 NGHEDT-VEDVTFCPSSAQE----FC-----------SVGDDSCLILWDARVGTSPVIKV 318
+G +D + Q F S G D I+WDA G + +
Sbjct: 246 DGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK--QQ 303
Query: 319 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 378
H A VDW +N + S D + ++ G PI F+GH+ V +
Sbjct: 304 FPFHSAPALDVDWQ--SNNTFASCSTDMCI------HVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 379 QWSPDKSSVFGSSAEDGLLNIWDYEK 404
+W P ++ S ++D L IW ++
Sbjct: 356 KWDPT-GNLLASCSDDMTLKIWSMKQ 380
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 66/266 (24%), Positives = 103/266 (38%)
Query: 155 IVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSG 214
I HTD +V DVE PN+ AV +L GH+ F A P + SG
Sbjct: 141 IANNHTDMMEV-DGDVEIPPNK-AV----------VLRGHESEV-FICAWNPVSDLLASG 187
Query: 215 GKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 274
D + +W++ ++ TS +T G + S K D ++G + G Y
Sbjct: 188 SGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP-SNKDVTSLDWNSEGTLLAT-GSY 245
Query: 275 NGHEDT-VEDVTFCPSSAQE----FC-----------SVGDDSCLILWDARVGTSPVIKV 318
+G +D + Q F S G D I+WDA G + +
Sbjct: 246 DGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK--QQ 303
Query: 319 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 378
H A VDW +N + S D + ++ G PI F+GH+ V +
Sbjct: 304 FPFHSAPALDVDWQ--SNNTFASCSTDMCI------HVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 379 QWSPDKSSVFGSSAEDGLLNIWDYEK 404
+W P ++ S ++D L IW ++
Sbjct: 356 KWDPT-GNLLASCSDDMTLKIWSMKQ 380
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 49/217 (22%), Positives = 92/217 (42%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A S+G
Sbjct: 248 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 304
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 305 LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 361
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 362 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 410
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 411 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 444
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 66/266 (24%), Positives = 103/266 (38%)
Query: 155 IVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSG 214
I HTD +V DVE PN+ AV +L GH+ F A P + SG
Sbjct: 141 IANNHTDMMEV-DGDVEIPPNK-AV----------VLRGHESEV-FICAWNPVSDLLASG 187
Query: 215 GKDKSVVLWSIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGNDKAADGPSVGPRGIY 274
D + +W++ ++ TS +T G + S K D ++G + G Y
Sbjct: 188 SGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP-SNKDVTSLDWNSEGTLLAT-GSY 245
Query: 275 NGHEDT-VEDVTFCPSSAQE----FC-----------SVGDDSCLILWDARVGTSPVIKV 318
+G +D + Q F S G D I+WDA G + +
Sbjct: 246 DGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK--QQ 303
Query: 319 EKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCV 378
H A VDW +N + S D + ++ G PI F+GH+ V +
Sbjct: 304 FPFHSAPALDVDWQ--SNNTFASCSTDMCI------HVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 379 QWSPDKSSVFGSSAEDGLLNIWDYEK 404
+W P ++ S ++D L IW ++
Sbjct: 356 KWDPT-GNLLASCSDDMTLKIWSMKQ 380
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 138 (53.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 48/217 (22%), Positives = 91/217 (41%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
+LTGH + L + E +++G D +V +W + + ++ + A +G
Sbjct: 260 VLTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNG 316
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 317 LMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 373
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 374 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 422
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 423 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 456
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 63/250 (25%), Positives = 99/250 (39%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 77 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 135
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 136 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 193
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q+ + D LWD G +++ H AD+ C+D
Sbjct: 194 ----HTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLA 247
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G I FE H + + V++ P F S
Sbjct: 248 PSETGNTFVSGGCDKKAMVWDMRS------GQCIQAFETHESDINSVRYYPS-GDAFASG 300
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 301 SDDATCRLYD 310
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 135 (52.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 64/250 (25%), Positives = 101/250 (40%)
Query: 169 DVEAQP--NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW-SI 225
DVE R LG + L GH N + C + ++S +D V++W S
Sbjct: 35 DVELHQVAERVEALGQFVMKTRRTLKGH-GNKVLCMDWCKDKRRLVSSSQDGKVIVWDSF 93
Query: 226 QDHITSSATDPAT---AKSAGSSGSII-------KQS--PKPGDGNDK-AADGPSVGPRG 272
+ + T P T A + SG I K S P D N+ AA SV
Sbjct: 94 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM-- 151
Query: 273 IYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWN 332
H + + +F S Q + GD +C LWD G +++ H AD+ C+D
Sbjct: 152 ----HTNYLSACSFTNSDMQILTASGDGTCA-LWDVESGQ--LLQSFHGHGADVLCLDLA 204
Query: 333 PLDD-NLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSS 391
P + N ++G D ++D R+ G + FE H + + V++ P F S
Sbjct: 205 PSETGNTFVSGGCDKKAMVWDMRS------GQCVQAFETHESDINSVRYYPS-GDAFASG 257
Query: 392 AEDGLLNIWD 401
++D ++D
Sbjct: 258 SDDATCRLYD 267
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 39/137 (28%), Positives = 62/137 (45%)
Query: 266 PSVG--PRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHD 323
PSV P+ GH+ V V F P + S D + LW+ G + V + H
Sbjct: 346 PSVSKQPKKRLTGHQQLVNHVYFSPDG-KWIASASFDKSVRLWNGITGQ--FVTVFRGHV 402
Query: 324 ADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPD 383
++ V W+ D L+L+GS D+++++++ R GH+ V V WSPD
Sbjct: 403 GPVYQVSWSA-DSRLLLSGSKDSTLKIWEIRTKKLK------QDLPGHADEVFAVDWSPD 455
Query: 384 KSSVFGSSAEDGLLNIW 400
V S +D +L +W
Sbjct: 456 GEKVV-SGGKDRVLKLW 471
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 290 SAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVR 349
S + S DD + LW+ V P ++ H ++ V ++P D I + S D SVR
Sbjct: 328 SPERLVSGSDDFTMFLWEPSVSKQPKKRLT-GHQQLVNHVYFSP-DGKWIASASFDKSVR 385
Query: 350 MFDRRNLTSNGV-GSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKK 408
++ NG+ G + F GH V V WS D S + S ++D L IW+ KK
Sbjct: 386 LW-------NGITGQFVTVFRGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRT--KK 435
Query: 409 VEQ 411
++Q
Sbjct: 436 LKQ 438
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 104 (41.7 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
+++ I +GS D+ V ++ +R+ PI + GH+ V CV W+P S+ S+++D
Sbjct: 435 NEDFIASGSEDHKVYIWHKRSEL------PIAELTGHTRTVNCVSWNPQIPSMMASASDD 488
Query: 395 GLLNIW 400
G + IW
Sbjct: 489 GTVRIW 494
Score = 76 (31.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPL 334
GH V + + P + G D C LW V T + K+ ++H+ L V WNP
Sbjct: 252 GHAYGVSYIAWSPDD-NYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP- 309
Query: 335 DDNLILTG 342
D +TG
Sbjct: 310 DGKRFVTG 317
Score = 62 (26.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNA 198
H EV + TK+ AT + V+IW V+ P+ H +L + L GH
Sbjct: 207 HCNEVWFCKFSNDGTKL-ATGSKDTTVIIWQVD--PDTH-LLKLLKT-----LEGHAYGV 257
Query: 199 EFALAMCPTEPYVLSGGKD--KSVVLWSIQ 226
+ +A P + Y+++ G D + LW++Q
Sbjct: 258 SY-IAWSPDDNYLVACGPDDCSELWLWNVQ 286
Score = 42 (19.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 85 QRLYLSEQTDGSVPNTLVIANCEV 108
Q+ YL DG V L + CE+
Sbjct: 70 QQKYLEYLEDGKVLEALQVLRCEL 93
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 104 (41.7 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 335 DDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAED 394
+++ I +GS D+ V ++ +R+ PI + GH+ V CV W+P S+ S+++D
Sbjct: 435 NEDFIASGSEDHKVYIWHKRSEL------PIAELTGHTRTVNCVSWNPQIPSMMASASDD 488
Query: 395 GLLNIW 400
G + IW
Sbjct: 489 GTVRIW 494
Score = 76 (31.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 276 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV-IKVEKAHDADLHCVDWNPL 334
GH V + + P + G D C LW V T + K+ ++H+ L V WNP
Sbjct: 252 GHAYGVSYIAWSPDD-NYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP- 309
Query: 335 DDNLILTG 342
D +TG
Sbjct: 310 DGKRFVTG 317
Score = 62 (26.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNA 198
H EV + TK+ AT + V+IW V+ P+ H +L + L GH
Sbjct: 207 HCNEVWFCKFSNDGTKL-ATGSKDTTVIIWQVD--PDTH-LLKLLKT-----LEGHAYGV 257
Query: 199 EFALAMCPTEPYVLSGGKD--KSVVLWSIQ 226
+ +A P + Y+++ G D + LW++Q
Sbjct: 258 SY-IAWSPDDNYLVACGPDDCSELWLWNVQ 286
Score = 42 (19.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 85 QRLYLSEQTDGSVPNTLVIANCEV 108
Q+ YL DG V L + CE+
Sbjct: 70 QQKYLEYLEDGKVLEALQVLRCEL 93
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 201 ALAMCPTEPY-VLSGGKDKSVVLWSIQ-DHITSSA---TDPATAKSAGSSGSIIKQSPKP 255
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNTSCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 316 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 428
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 201 ALAMCPTEPY-VLSGGKDKSVVLWSIQ-DHITSSA---TDPATAKSAGSSGSIIKQSPKP 255
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNTSCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 316 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 428
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 53/235 (22%), Positives = 101/235 (42%)
Query: 201 ALAMCPTEPY-VLSGGKDKSVVLWSIQ-DHITSSA---TDPATAKSAGSSGSIIKQSPKP 255
AL +CP++ +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 226 ALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVF-SASP 284
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 285 -DATIRIWSVPNTSCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 342
Query: 316 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 343 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 394
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 428
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 395 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 447
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 53/235 (22%), Positives = 100/235 (42%)
Query: 201 ALAMCPTEPY-VLSGGKDKSVVLWS-IQDHITSSA---TDPATAKSAGSSGSIIKQSPKP 255
AL +CP + +L+GG DK+VV++ + I ++ T T+ S ++ S P
Sbjct: 235 ALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVF-SASP 293
Query: 256 GDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPV 315
D + P+ + HE V ++ ++ S DD D + G
Sbjct: 294 -DATIRIWSVPNASCVQVVRAHESAVTGLSL-HATGDYLLSSSDDQYWAFSDIQTGRVLT 351
Query: 316 IKVEKAHDADLHCVDWNPLDDNLIL-TGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAA 374
++ L C ++P D LI TG+ D+ ++++D + T+ + F GHS
Sbjct: 352 KVTDETSGCSLTCAQFHP--DGLIFGTGTMDSQIKIWDLKERTN------VANFPGHSGP 403
Query: 375 VLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPA-GLFFQHAG 428
+ + +S + ++A+D + +WD K+ K + N+ L F +G
Sbjct: 404 ITSIAFS-ENGYYLATAADDSSVKLWDLRKL-KNFKTLQLDNNFEVKSLIFDQSG 456
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 49/217 (22%), Positives = 91/217 (41%)
Query: 190 ILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQD-HITSSAT--DPATAKSAGSSG 246
ILTGH + L + E +++G D +V +W + + ++ + A +G
Sbjct: 260 ILTGHTGSV---LCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG 316
Query: 247 SIIKQSPKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 306
++ S A + R + GH V V F + S D + +W
Sbjct: 317 LMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVW 373
Query: 307 DARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPIN 366
T ++ H + C+ + D L+++GS+DN++R++D G+ +
Sbjct: 374 ST--STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE------CGACLR 422
Query: 367 KFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE 403
EGH V C+++ +K V G A DG + +WD +
Sbjct: 423 VLEGHEELVRCIRFD-NKRIVSG--AYDGKIKVWDLQ 456
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 137 (53.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+ H + V D+ F P+ ++ F + GDDS + +W+ G + H ++ DW+P
Sbjct: 215 SAHANGVRDIAFSPNDSK-FLTCGDDSAIKIWNFNNGKEE--RTLSGHHWEVKSADWHP- 270
Query: 335 DDNLILTGSADNSVRMFDRRNL----TSNGVGSPINK--FEGHSAAVLCVQWSPDKSS-V 387
+ LI++GS DN V+++D R+ T +G +NK F+ + A L S D+S +
Sbjct: 271 NLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRI 330
Query: 388 FGSSAEDGLLNIWDYE 403
F +L I D E
Sbjct: 331 FDLRTMKDMLVIRDSE 346
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 137 (53.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 275 NGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPL 334
+ H + V D+ F P+ ++ F + GDDS + +W+ G + H ++ DW+P
Sbjct: 215 SAHANGVRDIAFSPNDSK-FLTCGDDSAIKIWNFNNGKEE--RTLSGHHWEVKSADWHP- 270
Query: 335 DDNLILTGSADNSVRMFDRRNL----TSNGVGSPINK--FEGHSAAVLCVQWSPDKSS-V 387
+ LI++GS DN V+++D R+ T +G +NK F+ + A L S D+S +
Sbjct: 271 NLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRI 330
Query: 388 FGSSAEDGLLNIWDYE 403
F +L I D E
Sbjct: 331 FDLRTMKDMLVIRDSE 346
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 61/264 (23%), Positives = 104/264 (39%)
Query: 170 VEAQPNRHAVLGATNSRPDLI-LTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDH 228
V +R + NSR L L GH + L C ++SG D ++++W Q+
Sbjct: 235 VSGSKDRTVSVWDVNSRFILYKLYGHSGSV-LCLDFCRRRNLLVSGSSDSTIIIWDWQNR 293
Query: 229 ITSSATDPATAKSAGS--SGSIIKQSPKPGDGNDKAADG--PSVGPRGIYNGHEDTVEDV 284
T G S + I S + D P+ + GH +V V
Sbjct: 294 RPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV 353
Query: 285 TFCPSSAQEFCSVGDDSCLILWDARVGTSPVIKVEKAHDADLHCVDWNPLDDNLILTGSA 344
+ S + D L WD + T I++ AH + C +N I++GS+
Sbjct: 354 QYS-SKTGLIVTASSDRTLRTWD--ITTGHCIRIIHAHQRGIACAQYN---GKFIVSGSS 407
Query: 345 DNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEK 404
D ++R+F+ + G + +GH + V+++ +K S DG + IW++
Sbjct: 408 DLTIRIFEASS------GKLLRMLQGHEDLIRTVRFNDEK---IVSGGYDGTVRIWNFN- 457
Query: 405 VGKK--VEQGPRTTNYPAGLFFQH 426
G++ V R + GL F H
Sbjct: 458 TGEQHCVLHNSRNSRV-FGLQFDH 480
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 73/290 (25%), Positives = 108/290 (37%)
Query: 153 TKIVATHTDSPDVLIWDVEAQPN-RHAVLGATNSRPDL----------ILTGHQDNAEFA 201
TK V T T+ ++ V P R V GA++ L IL H D+ A
Sbjct: 108 TKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAH-DSPVRA 166
Query: 202 LAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGND 260
+ + ++L+ V W S +++ + A S + K + DG
Sbjct: 167 MTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTV 226
Query: 261 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVE 319
+ D I GH V+ V + P+ D I WD + G S +
Sbjct: 227 RIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS--LATL 284
Query: 320 KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQ 379
AH + V N L+ N +LT S D+ ++FD RNL + F GH V
Sbjct: 285 HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEE-----LQVFRGHKKEATAVA 338
Query: 380 WSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 429
W P +F S DG L W VG + E G + G+ + A H
Sbjct: 339 WHPVHEGLFASGGSDGSLLFWH---VGVEKEVGGMEMAHE-GMIWSLAWH 384
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 73/290 (25%), Positives = 108/290 (37%)
Query: 153 TKIVATHTDSPDVLIWDVEAQPN-RHAVLGATNSRPDL----------ILTGHQDNAEFA 201
TK V T T+ ++ V P R V GA++ L IL H D+ A
Sbjct: 104 TKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAH-DSPVRA 162
Query: 202 LAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGND 260
+ + ++L+ V W S +++ + A S + K + DG
Sbjct: 163 MTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTV 222
Query: 261 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVE 319
+ D I GH V+ V + P+ D I WD + G S +
Sbjct: 223 RIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS--LATL 280
Query: 320 KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQ 379
AH + V N L+ N +LT S D+ ++FD RNL + F GH V
Sbjct: 281 HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEE-----LQVFRGHKKEATAVA 334
Query: 380 WSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 429
W P +F S DG L W VG + E G + G+ + A H
Sbjct: 335 WHPVHEGLFASGGSDGSLLFWH---VGVEKEVGGMEMAHE-GMIWSLAWH 380
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 141 (54.7 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 73/290 (25%), Positives = 108/290 (37%)
Query: 153 TKIVATHTDSPDVLIWDVEAQPN-RHAVLGATNSRPDL----------ILTGHQDNAEFA 201
TK V T T+ ++ V P R V GA++ L IL H D+ A
Sbjct: 108 TKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAH-DSPVRA 166
Query: 202 LAMCPTEPYVLSGGKDKSVVLW-SIQDHITSSATDPATAKSAGSSGSIIKQSPKPGDGND 260
+ + ++L+ V W S +++ + A S + K + DG
Sbjct: 167 MTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTV 226
Query: 261 KAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLI-LWDARVGTSPVIKVE 319
+ D I GH V+ V + P+ D I WD + G S +
Sbjct: 227 RIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQS--LATL 284
Query: 320 KAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNLTSNGVGSPINKFEGHSAAVLCVQ 379
AH + V N L+ N +LT S D+ ++FD RNL + F GH V
Sbjct: 285 HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEE-----LQVFRGHKKEATAVA 338
Query: 380 WSPDKSSVFGSSAEDGLLNIWDYEKVGKKVEQGPRTTNYPAGLFFQHAGH 429
W P +F S DG L W VG + E G + G+ + A H
Sbjct: 339 WHPVHEGLFASGGSDGSLLFWH---VGVEKEVGGMEMAHE-GMIWSLAWH 384
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 137 (53.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 66/253 (26%), Positives = 103/253 (40%)
Query: 139 HPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGA-TNSRPDLILTGHQDN 197
H G V R L ++ +++ D + WD LG+ TN+ ++ GH
Sbjct: 359 HCGPVYSTRFLADSSGLLSCSEDM-SIRYWD----------LGSFTNT---VLYQGHAYP 404
Query: 198 AEFALAMCPTEPYVLSGGKDKSVVLWSIQDHI-----TSSATDPATAKSAGSSGSIIKQS 252
+ L + P Y SG D++ LWS D K +S + S
Sbjct: 405 V-WDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGS 463
Query: 253 PKPGDGNDKAADGPSVGPRGIYNGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGT 312
A G SV ++ GH V + F P+ + S G+D L LWD GT
Sbjct: 464 TDKTVRLWSAQQGNSVR---LFTGHRGPVLSLAFSPNG-KYLASAGEDQRLKLWDLASGT 519
Query: 313 SPVIKVEKAHDADLHCVDWNPLDDNLILTGSADNSVRMFDRRNL-----TSNGVGSPINK 367
+ K + H ++ + ++P D +LI + S DNSVR++D RN G +
Sbjct: 520 --LYKELRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV 576
Query: 368 FEGHSAAVLCVQW 380
+ G + VL VQ+
Sbjct: 577 YTGQMSNVLSVQF 589
WARNING: HSPs involving 329 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 479 458 0.00095 118 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 579
No. of states in DFA: 622 (66 KB)
Total size of DFA: 321 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.74u 0.20s 41.94t Elapsed: 00:00:01
Total cpu time: 41.83u 0.21s 42.04t Elapsed: 00:00:01
Start: Sat May 11 08:36:40 2013 End: Sat May 11 08:36:41 2013
WARNINGS ISSUED: 2