Citrus Sinensis ID: 011711

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------48
MFRQLISSIDFVCLCLFMMYSMEVKASRRFTYQRERSLFNPVNERAGGRVGGGWPTKKVLCVYFLEGRCNRNPCRFAHTESQTLPVSNHKKSPPSYNCPKNNVRVSSGSEEGTTHVQNRENPDRTVPNKSSLDCSTGSDDSGSKRTLERTTPKNVCYHWLSGNCVKGDECRFWHSWFCGEGFTMLAKLEGHKKAVSGIALPLRSDKLYSGSRDGTVQLWDCHTGQSASVINLGAEVGSLICEGPWVFVGMPNVVKAWHIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGNILVWKGIPNTQNPFQLAALLKGHTRPVTCLAVGGKRLYSGSMDNTIRVWDLDTLEAVMTLNGHTDAPMSLLCWDQYLLSCSLDNTIKVWIMTEEGNLEVAYTHNEDHGVLALGGLNDPDGNPVLICSCNDDSVHLYELPSFMERGRIFSRREVRVIETGPDGLFFTGDGTGMLSVWKILAKPNAEMA
cccEEEEEEEEEEEEEEEEEccccccccccccccEEEEEEccccccccEEccccccccEEEEEEEECccccccCEEECccccccccccccccccEEECcccccEEEEccccccEEEEEccccccEEEccccccccccccccccccEEcccccEEEEECccccEEEEcccccEEEEEEcccccEEEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEEccccEEEEEEcccCEEECccccEEEEEcccccEEEEEcccccEEEEEEcccEEEEECccccEEEEEcccccccccccccccccccccEEEEEEcccEEEEccccccEEEEEcccccEEEEECcccccEEEEEEcccEEEEEEccccEEEEEccccccEEEcccccccEEEEEECccccccccCEEEEECccccEEEEEcccccEEEEEcccccEEEEEEccccEEEEEcccccEEEEEcccccEEccc
****LISSIDFVCLCLFMMYSMEVKASRRFTYQRERSLFNPVNERAGGRVGGGWPTKKVLCVYFLEGRCNRNPCRFAHTESQTLPVSNHKKSPPSYNCPKNNVRVSSGSEEGTTHVQNRENPDRTVPNKSSLDCSTGSDDSGSKRTLERTTPKNVCYHWLSGNCVKGDECRFWHSWFCGEGFTMLAKLEGHKKAVSGIALPLRSDKLYSGSRDGTVQLWDCHTGQSASVINLGAEVGSLICEGPWVFVGMPNVVKAWHIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGNILVWKGIPNTQNPFQLAALLKGHTRPVTCLAVGGKRLYSGSMDNTIRVWDLDTLEAVMTLNGHTDAPMSLLCWDQYLLSCSLDNTIKVWIMTEEGNLEVAYTHNEDHGVLALGGLNDPDGNPVLICSCNDDSVHLYELPSFMERGRIFSRREVRVIETGPDGLFFTGDGTGMLSVWKILAKPN****
xxxxxHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFRQLISSIDFVCLCLFMMYSMEVKASRRFTYQRERSLFNPVNERAGGRVGGGWPTKKVLCVYFLEGRCNRNPCRFAHTESQTLPVSNHKKSPPSYNCPKNNVRVSSGSEEGTTHVQNRENPDRTVPNKSSLDCSTGSDDSGSKRTLERTTPKNVCYHWLSGNCVKGDECRFWHSWFCGEGFTMLAKLEGHKKAVSGIALPLRSDKLYSGSRDGTVQLWDCHTGQSASVINLGAEVGSLICEGPWVFVGMPNVVKAWHIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGNILVWKGIPNTQNPFQLAALLKGHTRPVTCLAVGGKRLYSGSMDNTIRVWDLDTLEAVMTLNGHTDAPMSLLCWDQYLLSCSLDNTIKVWIMTEEGNLEVAYTHNEDHGVLALGGLNDPDGNPVLICSCNDDSVHLYELPSFMERGRIFSRREVRVIETGPDGLFFTGDGTGMLSVWKILAKPNAEMA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Zinc finger CCCH domain-containing protein 17 probableQ0DYP5
Zinc finger CCCH domain-containing protein 63 probableQ9FNZ1

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1P22, chain A
Confidence level:very confident
Coverage over the Query: 60-123,143-230,265-429
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Template: 1ERJ, chain A
Confidence level:very confident
Coverage over the Query: 88-130,149-231,270-433
View the alignment between query and template
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Template: 3DM0, chain A
Confidence level:very confident
Coverage over the Query: 145-230,268-470
View the alignment between query and template
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Template: 3SFZ, chain A
Confidence level:very confident
Coverage over the Query: 85-124,144-474
View the alignment between query and template
View the model in PyMOL
Template: 2E5S, chain A
Confidence level:probable
Coverage over the Query: 34-80
View the alignment between query and template
View the model in PyMOL