Query 011712
Match_columns 479
No_of_seqs 246 out of 1118
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 04:24:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011712.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011712hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02171 endoglucanase 100.0 1E-111 3E-116 911.2 48.1 471 1-479 159-629 (629)
2 PLN02340 endoglucanase 100.0 4E-105 8E-110 858.8 39.8 450 1-477 159-614 (614)
3 PLN02420 endoglucanase 100.0 3.6E-83 7.8E-88 677.9 33.7 339 1-339 170-510 (525)
4 PLN00119 endoglucanase 100.0 4.2E-82 9.1E-87 664.8 33.2 330 1-336 160-489 (489)
5 PLN02266 endoglucanase 100.0 1E-81 2.2E-86 664.8 33.8 335 1-341 173-509 (510)
6 PLN02175 endoglucanase 100.0 1.2E-80 2.6E-85 652.2 33.8 329 1-339 152-482 (484)
7 PLN02308 endoglucanase 100.0 1.7E-80 3.7E-85 654.8 32.9 331 1-337 155-487 (492)
8 PLN02345 endoglucanase 100.0 3.3E-80 7.3E-85 649.2 33.1 330 1-337 125-460 (469)
9 PLN02909 Endoglucanase 100.0 2E-79 4.2E-84 644.2 32.7 322 1-337 163-485 (486)
10 PLN02613 endoglucanase 100.0 6.1E-79 1.3E-83 643.0 33.2 329 1-342 155-485 (498)
11 PLN03009 cellulase 100.0 1.5E-78 3.3E-83 642.6 33.2 334 1-340 156-493 (495)
12 PF00759 Glyco_hydro_9: Glycos 100.0 1.5E-66 3.2E-71 551.1 21.5 306 1-333 137-444 (444)
13 PF09478 CBM49: Carbohydrate b 99.9 2.3E-22 5.1E-27 163.9 10.4 79 387-465 1-80 (80)
14 PF00553 CBM_2: Cellulose bind 99.0 8E-10 1.7E-14 94.1 6.3 77 387-467 1-85 (101)
15 smart00637 CBD_II CBD_II domai 98.5 3.7E-07 8E-12 76.2 8.6 68 395-466 2-78 (92)
16 PF06483 ChiC: Chitinase C; I 96.7 0.011 2.4E-07 54.8 9.0 88 385-474 34-153 (180)
17 COG5297 CelA Cellobiohydrolase 96.6 0.0073 1.6E-07 61.6 8.4 75 385-464 462-542 (544)
18 COG1331 Highly conserved prote 94.4 0.12 2.6E-06 57.2 8.0 86 17-108 410-497 (667)
19 KOG2787 Lanthionine synthetase 89.6 1 2.2E-05 45.8 7.0 69 22-107 284-354 (403)
20 PF03663 Glyco_hydro_76: Glyco 89.2 0.74 1.6E-05 48.2 6.1 78 26-107 160-249 (370)
21 cd00249 AGE AGE domain; N-acyl 87.7 1.5 3.2E-05 45.4 7.2 85 16-106 51-142 (384)
22 PF09624 DUF2393: Protein of u 84.3 6.5 0.00014 35.5 8.7 70 405-475 64-146 (149)
23 cd04791 LanC_SerThrkinase Lant 82.2 26 0.00057 35.1 13.1 24 83-106 143-166 (321)
24 cd00249 AGE AGE domain; N-acyl 82.1 9 0.0002 39.6 9.9 83 16-106 113-200 (384)
25 PF10633 NPCBM_assoc: NPCBM-as 76.6 5.2 0.00011 31.8 4.8 54 405-466 7-60 (78)
26 PF03663 Glyco_hydro_76: Glyco 66.6 12 0.00026 39.1 6.0 86 16-106 86-182 (370)
27 PF01299 Lamp: Lysosome-associ 62.0 1.5E+02 0.0032 30.1 12.8 32 442-478 164-195 (306)
28 PF14796 AP3B1_C: Clathrin-ada 59.9 39 0.00084 30.8 7.2 68 384-459 66-133 (145)
29 PF03173 CHB_HEX: Putative car 59.6 55 0.0012 30.4 8.3 71 403-474 30-119 (164)
30 PF05753 TRAP_beta: Translocon 56.2 83 0.0018 29.6 9.1 76 385-466 21-97 (181)
31 TIGR01451 B_ant_repeat conserv 54.8 19 0.00042 26.7 3.7 23 404-426 13-35 (53)
32 PF07944 DUF1680: Putative gly 54.7 35 0.00076 37.4 7.3 76 22-108 129-204 (520)
33 PF11611 DUF4352: Domain of un 54.0 74 0.0016 26.9 7.9 77 395-473 26-112 (123)
34 PF07705 CARDB: CARDB; InterP 53.3 1.1E+02 0.0024 24.4 8.6 52 405-467 21-72 (101)
35 PF07470 Glyco_hydro_88: Glyco 51.8 50 0.0011 33.7 7.5 30 79-108 24-54 (336)
36 cd04792 LanM-like LanM-like pr 50.3 2.7E+02 0.0059 32.2 14.0 75 21-106 494-568 (825)
37 KOG1586 Protein required for f 47.3 27 0.00059 34.5 4.3 35 22-56 72-106 (288)
38 KOG4056 Translocase of outer m 43.5 39 0.00084 30.4 4.3 40 16-55 10-53 (143)
39 PF04379 DUF525: Protein of un 40.6 78 0.0017 26.3 5.5 19 401-419 10-28 (90)
40 PF07221 GlcNAc_2-epim: N-acyl 37.8 55 0.0012 33.5 5.2 83 16-106 19-107 (346)
41 COG1470 Predicted membrane pro 35.9 63 0.0014 34.9 5.2 51 405-463 399-449 (513)
42 PF08626 TRAPPC9-Trs120: Trans 35.1 1.8E+02 0.0038 35.5 9.6 66 404-469 800-882 (1185)
43 PF01345 DUF11: Domain of unkn 35.0 53 0.0012 25.7 3.6 41 385-426 24-64 (76)
44 PF07944 DUF1680: Putative gly 34.0 1.9E+02 0.0041 31.7 8.9 64 43-106 253-329 (520)
45 PF12690 BsuPI: Intracellular 33.8 89 0.0019 25.4 4.8 58 405-467 2-71 (82)
46 KOG3865 Arrestin [Signal trans 32.2 43 0.00092 34.3 3.1 44 384-428 192-235 (402)
47 PF05750 Rubella_Capsid: Rubel 32.1 49 0.0011 31.1 3.3 25 396-420 158-183 (300)
48 COG3533 Uncharacterized protei 31.1 39 0.00085 36.7 2.8 26 82-107 181-206 (589)
49 PF07470 Glyco_hydro_88: Glyco 30.1 4.7E+02 0.01 26.5 10.6 28 219-246 268-297 (336)
50 PF06917 Pectate_lyase_2: Peri 29.7 46 0.00099 36.2 3.0 24 83-106 441-464 (557)
51 PF07221 GlcNAc_2-epim: N-acyl 28.8 59 0.0013 33.2 3.7 81 17-106 78-166 (346)
52 cd04791 LanC_SerThrkinase Lant 26.3 6.4E+02 0.014 24.9 10.8 50 83-134 201-250 (321)
53 COG3353 FlaF Putative archaeal 20.9 3.2E+02 0.007 24.4 6.1 23 405-427 65-89 (137)
54 COG4403 LcnDR2 Lantibiotic mod 20.7 3E+02 0.0065 32.3 7.4 86 14-107 735-821 (963)
No 1
>PLN02171 endoglucanase
Probab=100.00 E-value=1.2e-111 Score=911.18 Aligned_cols=471 Identities=78% Similarity=1.283 Sum_probs=422.0
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCc
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGY 80 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~ 80 (479)
|+++||+|+|++++||||+++++|||||+||||||++||+||++||+|||+||+||+++|+.|+++++...+||++.++|
T Consensus 159 ~~~~R~~y~i~~~~pgSd~a~e~AAAlAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~Y~s~s~y 238 (629)
T PLN02171 159 MTTDRQAYRIDPQNPGSDLAGETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGY 238 (629)
T ss_pred ccccceeEEecCCCCchHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcccCCccCCCCCc
Confidence 68899999999999999999999999999999999999999999999999999999999999988888888999976789
Q ss_pred ccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH
Q 011712 81 NDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF 160 (479)
Q Consensus 81 ~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~~ 160 (479)
.|||+|||+|||+||||++|++++..+.+.+++..|...+|+||+++.|+++|++++++.++.+.+...+++|++.+|.|
T Consensus 239 ~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~G~~~L~a~~~~~~~~~~~~~~~~~y~~~ad~~ 318 (629)
T PLN02171 239 GDELLWAAAWLYQATNNQYYLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFF 318 (629)
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCcccCccccccccchHHHHHHHHHHhcCCccchhhHHHHHHHHHHHH
Confidence 99999999999999999999999998877676677877789999999999999999876666556677889999999999
Q ss_pred HHHhhCCCCCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCCCC
Q 011712 161 MCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNP 240 (479)
Q Consensus 161 ~~~~~~~~~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~Np 240 (479)
+|.+++++..++.+||||++|...|||+||++|++||+++|+|++.++.+.+.|..+.....+|+++|++|||||||+||
T Consensus 319 ~~~~l~~~~~~~~~TpgGl~~~~~Wgs~~y~~naafl~~vyad~~~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~Np 398 (629)
T PLN02171 319 MCSCLGKGARNVQKTPGGLIYRQRWNNMQFVTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNP 398 (629)
T ss_pred HHhhccCCCceeeecCCeeEEECCCChHHHHHHHHHHHHHHHHHhhhcccccccccccCCHHHHHHHHHHhhhhhcCCCC
Confidence 99988775567899999999999999999999999999999999987777799988888899999999999999999999
Q ss_pred CCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccccc
Q 011712 241 RATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEP 320 (479)
Q Consensus 241 ~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEv 320 (479)
+++|||||||+|+|+|||||.+++++++.+|.++.|.+||+.|++.+.+||++|+|+||||||..|+|.|+|.+|++|||
T Consensus 399 ~~~SYvVGyG~n~P~~pHHR~as~~~~~~~~~~~~C~~g~~~~~~~~~~np~vl~GAlVGGPd~~D~y~D~r~~y~~nEv 478 (629)
T PLN02171 399 RATSYMVGYGANYPRQVHHRGSSIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEP 478 (629)
T ss_pred CCCceEeecCCCCCCCcccccccCCccccCccccCCCCccchhccCCCCCCCcccCceecCCCcCCCCCccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchHHHHHHHHhhcCCCCCcccccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeecccccC
Q 011712 321 ATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISN 400 (479)
Q Consensus 321 aId~NA~lv~~la~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~i~q~~~~sW~~~ 400 (479)
|||||||||++||+|...+||..+.+ .+.+.|..+.....|.|...+ .||.|..+..+|+|+|+++++|+++
T Consensus 479 a~d~NA~~vg~lA~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ei~i~q~v~~sW~~~ 550 (629)
T PLN02171 479 ATYNNAPLLGVLARLAGGHGGYNQLL---VVVPAPSEVAINRTPAPQRRP-----PTPAPASTSSPIEIEQKATASWKAK 550 (629)
T ss_pred eEecchHHHHHHHHHHhhcCCccccc---cccCCccccccccCCCCCCCc-----ccCCCccCcceeEEEEEEEEEEEcC
Confidence 99999999999999999888765533 111112222212222222211 1222222346899999999999999
Q ss_pred CeEEEEEEEEEEeCCCCcceeeEEEecCCCCCccccEecCCeeecCCCcccCCCCCeEEEEEEecCCCceEEEEEEEeC
Q 011712 401 GKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA 479 (479)
Q Consensus 401 ~~~y~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~~~n~~~lPs~~~~i~~g~s~~FGyI~~~~~a~~~v~~~~~~ 479 (479)
|++|+||+|+|+|++.++||+++|.++++..+||||++.+|.|+||+|+.+|++|++++||||+++.||+|+|++|.|+
T Consensus 551 g~~y~qy~v~I~N~s~~~ik~i~i~~~~~~~~iW~v~~~~ngytlPs~~~sL~aG~s~tFgyI~~~~pA~~~v~~y~~~ 629 (629)
T PLN02171 551 GRTYYRYSTTVTNRSAKTLKELHLGISKLYGPLWGLTKAGYGYVLPSWMPSLPAGKSLEFVYVHSASPADVWVSGYKLA 629 (629)
T ss_pred CceEEEEEEEEEECCCCceeeeeeeeccccccchheeecCCcccCchhhcccCCCCeeEEEeecCCCCceEEEEEEEeC
Confidence 9999999999999999999999999998889999999988899999999999999999999999966999999999874
No 2
>PLN02340 endoglucanase
Probab=100.00 E-value=3.6e-105 Score=858.82 Aligned_cols=450 Identities=53% Similarity=0.962 Sum_probs=405.4
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCc
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGY 80 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~ 80 (479)
|+++||+|+|+.++||||+++++|||||+||||||++||+||++||+|||+||+||+++|+.|.++++...+||.| ++|
T Consensus 159 ~~~~R~~y~i~~~~pgSd~a~e~AAAlAaas~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~s~~~a~~~Y~s-s~~ 237 (614)
T PLN02340 159 MTTPRTAYKLDQNHPGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQNAKKFYTS-SGY 237 (614)
T ss_pred cCCcCceeecCCCCCccHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCccccCCCC-CCc
Confidence 7899999999999999999999999999999999999999999999999999999999999998877778899997 899
Q ss_pred ccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH
Q 011712 81 NDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF 160 (479)
Q Consensus 81 ~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~~ 160 (479)
.|||+|||+|||+||||++|++++..+...+++..|....|+||+|..|+++||++++++++...+...+++|++.+|.|
T Consensus 238 ~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~ 317 (614)
T PLN02340 238 SDELLWAAAWLYRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGAYTSTLKQYQAKADYF 317 (614)
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHHHHHhcccccccCCcCCccchhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999998766566666776789999999999999999876655445667778899999999
Q ss_pred HHHhhCC-CCCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCCC
Q 011712 161 MCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDN 239 (479)
Q Consensus 161 ~~~~~~~-~~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~N 239 (479)
+|.++.+ +++++++||+|+.|+..|||+||+++++||+++|++++.++...+.|+.+...+.+|+++|++|||||||+|
T Consensus 318 ~~~~~~~~~g~~v~~TpgGl~~~~~Wgn~rya~~aafl~~vyad~l~~~~~~~~c~~~~~~~~~y~~fA~sQidYiLG~N 397 (614)
T PLN02340 318 ACACLQKNGGYNIQLTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAANAKLRCPDGLVQPQELLDFARSQADYILGKN 397 (614)
T ss_pred HHhhhccCCCCccccCCCceEEeCCCChHHHHHHHHHHHHHHHHHhhhcccccccCccccCHHHHHHHHHHhhHhhcCCC
Confidence 9988776 568999999999999999999999999999999999998777789999888889999999999999999999
Q ss_pred CCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCccccc
Q 011712 240 PRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTE 319 (479)
Q Consensus 240 p~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NE 319 (479)
|+++|||||||.|+|+|||||.++|+.+..++.++.|.+|+++|++.+.++|++|+|+||||||..|+|.|+|++|++||
T Consensus 398 P~~~SYVVGyG~n~P~~pHHR~as~~~~~~~~~~v~c~~g~~~~~~~~~~np~vL~GALVGGPd~~D~y~D~r~~y~~nE 477 (614)
T PLN02340 398 PKGMSYMVGYGPKYPIHVHHRGSSIPSIFALHSTVGCVQGFDSWYRRKEADPNVIYGALVGGPDANDNFSDDRSNYEQTE 477 (614)
T ss_pred CCCCceEeccCCCCCCccccccccCCccccccccccCcccccccccCCCCCCCCCCCceeeCCCCCCCCCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchHHHHHHHHhhcCC---CCCcccccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeecc
Q 011712 320 PATYNNAPILGILARLNAGHG---GYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTS 396 (479)
Q Consensus 320 vaId~NA~lv~~la~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~i~q~~~~s 396 (479)
||||||||||++||+|.+..+ +..+ . .|.|...| |.+ ...+++|.|+++++
T Consensus 478 vAidyNAplvg~lA~L~~~~~~~~~~~~------~-----------~~~~~~~~---~~~------~~~~~e~~~~~~~s 531 (614)
T PLN02340 478 PTLSGNAPLVGLFAKLQSASETADAYGS------Y-----------KPTPNTSS---PKQ------SGAPVEFVHSITNT 531 (614)
T ss_pred ceeehhHHHHHHHHHHHhcccccccccc------C-----------CCCCCCCC---ccc------CCCchhhhhhheee
Confidence 999999999999999997532 2211 0 11111100 111 12446778999999
Q ss_pred cccCCeEEEEEEEEEEeCCCCcceeeEEEecCCCCCccccEe--cCCeeecCCCcccCCCCCeEEEEEEecCCCceEEEE
Q 011712 397 WISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN--LGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVS 474 (479)
Q Consensus 397 W~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~--~~n~~~lPs~~~~i~~g~s~~FGyI~~~~~a~~~v~ 474 (479)
|+.++++|+|+.|+|+|++.++|+.++|.+.+++.+||||++ ..+.|+||+|+.+|++|++++|+||+.+.|++++|.
T Consensus 532 w~~~g~~y~~~~v~i~N~s~~pi~~l~~~~~~l~g~lwgl~~~~~~~~y~~p~~~~tl~~g~~~~f~yi~~~~~~~~~~~ 611 (614)
T PLN02340 532 WTAGGTTYYRHKVIIKNKSQKPITDLKLVIEDLSGPIWGLNPTKEKNTYELPQWQKVLQPGSQLSFVYVQGGPQAKVSVL 611 (614)
T ss_pred eecCCceEEEEEEEEEeCCCCCchhhhhhhhhcccchhcceeccccCCccCchhhhccCCCCeeEEEeccCCcchheecc
Confidence 999999999999999999999999999999999899999985 357999999999999999999999988889999998
Q ss_pred EEE
Q 011712 475 AYT 477 (479)
Q Consensus 475 ~~~ 477 (479)
+|+
T Consensus 612 ~y~ 614 (614)
T PLN02340 612 SYN 614 (614)
T ss_pred ccC
Confidence 874
No 3
>PLN02420 endoglucanase
Probab=100.00 E-value=3.6e-83 Score=677.91 Aligned_cols=339 Identities=57% Similarity=1.031 Sum_probs=311.9
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCc
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGY 80 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~ 80 (479)
|+++||+|+|+.++|||++++++|||||+||||||++||+||++||+|||++|+||+++|+.|.++.+...+||.|+++|
T Consensus 170 ~~~~R~~~~i~~~~pgsd~aa~~AAALA~AS~vfk~~D~~YA~~~L~~Ak~ly~fA~~~~g~y~~~~~~~~g~Y~s~s~y 249 (525)
T PLN02420 170 MTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSYYASVSGY 249 (525)
T ss_pred ccccCceEEecCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhcCCccCCCCcccCCCCCCcCcc
Confidence 67899999999999999999999999999999999999999999999999999999999999977777778999987899
Q ss_pred ccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH
Q 011712 81 NDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF 160 (479)
Q Consensus 81 ~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~~ 160 (479)
.||++|||+|||+||||++|++++..+...+++..|....|+||++..|+++||+++..+++...++..++.|+..++.+
T Consensus 250 ~DEl~WAAawLY~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~WD~k~~G~~~Lla~~~~~~~~~~~~~~l~~y~~~ad~~ 329 (525)
T PLN02420 250 MDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKYAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHY 329 (525)
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCccccCcccCCcccHHHHHHHHHHHhccccccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999988776666667777789999999999999998765433223456778899999999
Q ss_pred HHHhhCCC--CCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCC
Q 011712 161 MCSCLGKG--SRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGD 238 (479)
Q Consensus 161 ~~~~~~~~--~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~ 238 (479)
+|.+++++ +.++.+||+|+.|...||++||++|++||+++|++++.++.+.+.|.++...+.+|++||++|||||||+
T Consensus 330 ~~~~~~~~~~~~~~~~TpgGl~~~~~Wgs~ryaan~afla~vya~~l~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~ 409 (525)
T PLN02420 330 LCSILNKNINGTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGS 409 (525)
T ss_pred HHhhccCCCCCCcccccCCeeEEeCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHhhhhhccC
Confidence 99877662 3478899999999999999999999999999999999877778999888788899999999999999999
Q ss_pred CCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccc
Q 011712 239 NPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQT 318 (479)
Q Consensus 239 Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~N 318 (479)
||+++|||||||.|+|+|||||.+||+.+...+..+.|.+|+.+|++.+.+||++|+|+||||||..|.|.|+|++|++|
T Consensus 410 NP~~~SYvVGfG~n~P~~pHHR~As~p~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GALVGGPd~~D~y~D~r~~y~~n 489 (525)
T PLN02420 410 NPMETSYLVGYGPKYPTRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDCQDNFDDRRGNYVQT 489 (525)
T ss_pred CCCCCceEeccCCCCCCCccccccCCCccccccccccCcccccccccCCCCCcccccCceecCCCCCCCccccccccccc
Confidence 99999999999999999999999999888777888999999999999999999999999999999999999999999999
Q ss_pred cccccCCchHHHHHHHHhhcC
Q 011712 319 EPATYNNAPILGILARLNAGH 339 (479)
Q Consensus 319 EvaId~NA~lv~~la~l~~~~ 339 (479)
||+|||||+||++||+|....
T Consensus 490 E~~~~~nA~~vg~lA~L~~~~ 510 (525)
T PLN02420 490 EACTYNTAPLVGVFARLIELE 510 (525)
T ss_pred ccchhhhhHHHHHHHHHHHhc
Confidence 999999999999999999764
No 4
>PLN00119 endoglucanase
Probab=100.00 E-value=4.2e-82 Score=664.84 Aligned_cols=330 Identities=53% Similarity=0.938 Sum_probs=301.0
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCc
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGY 80 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~ 80 (479)
|+++||+|+|+.++||||+++++|||||+||||||++||+||++||+|||++|+||+++|+.|.++++..+++|.+ ++|
T Consensus 160 ~~~~R~~y~i~~~~pgSd~a~~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~~~~~~g~Y~s-s~~ 238 (489)
T PLN00119 160 MTTPRTSYRIDAQHPGSDLAGETAAAMAAASIAFAPSDPAYASILIGHAKDLFEFAKAHPGLYQNSIPNAGGFYAS-SGY 238 (489)
T ss_pred CCCcCceeecCCCCCchHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCC-Cch
Confidence 6789999999999999999999999999999999999999999999999999999999999998777767899997 899
Q ss_pred ccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH
Q 011712 81 NDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF 160 (479)
Q Consensus 81 ~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~~ 160 (479)
.||++|||+|||++|||++|++++..+.... +. ...|+||+|..|+++||+++++.++. ..++.++.|++.++.|
T Consensus 239 ~DEl~WAAawLY~aTgd~~Yl~~~~~~~~~~-~~---~~~f~Wd~k~~g~~vlLa~l~~~~~~-~~~~~~~~y~~~ae~~ 313 (489)
T PLN00119 239 EDELLWAAAWLHRATNDQTYLDYLTQASNTG-GP---RTVFAWDDKFVGAQVLVAKLALEGKV-ESNGKIVEYKSMAEQF 313 (489)
T ss_pred hhHHHHHHHHHHHHhCCHHHHHHHHhccccC-CC---CcccChhhhHHHHHHHHHHHhccCCC-cchHHHHHHHHHHHHH
Confidence 9999999999999999999999988754321 11 24699999999999999998654432 2334567899999999
Q ss_pred HHHhhCCCCCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCCCC
Q 011712 161 MCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNP 240 (479)
Q Consensus 161 ~~~~~~~~~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~Np 240 (479)
+|.++++....+.+||+||.|...||++||+++++||+++|++++.++++.+.|+.......+|++||++|||||||+||
T Consensus 314 ~~~~~~~~~~~~~~TpgGl~~~~~wg~~ry~~~~afla~~ya~yl~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP 393 (489)
T PLN00119 314 ICNCAQKGSNNVKKTPGGLLWFLPWNNLQYTTAASFVLSAYSKYLEAAKASIQCPNGALQASDLLQLARSQVDYILGSNP 393 (489)
T ss_pred HHhhccCCCccceecCCeeEEecCCccHHHHHHHHHHHHHHHHHHhhcccccccCCCCcCHHHHHHHHHHHHHHhcCCCC
Confidence 99877654457889999999999999999999999999999999987777899988778889999999999999999999
Q ss_pred CCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccccc
Q 011712 241 RATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEP 320 (479)
Q Consensus 241 ~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEv 320 (479)
+++|||||||.|+|+|||||.+||+.+..++.++.|.+|++.|++.+.+||++|.||||||||..|.|.|+|.+|++|||
T Consensus 394 ~~~SYvVGyG~n~P~~pHHR~as~~~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nEv 473 (489)
T PLN00119 394 KNMSYMVGYGTNYPKKPHHRGASIVSIKKDKTPVTCSGGFDAWYNNPAPNPNVLMGAIVGGPDDNDVYGDERSNFQQAEP 473 (489)
T ss_pred CCCceEeecCCCCCCccccccCCCCccccCCcccCCCCCccccccCCCCCcceecceeecCCCCCCCcCccccccccCcc
Confidence 99999999999999999999999998888899999999999899999999999999999999999999999999999999
Q ss_pred cccCCchHHHHHHHHh
Q 011712 321 ATYNNAPILGILARLN 336 (479)
Q Consensus 321 aId~NA~lv~~la~l~ 336 (479)
||||||+||++||+|.
T Consensus 474 a~dyNA~~vgalA~l~ 489 (489)
T PLN00119 474 ATVTVAPFVGVLAAVA 489 (489)
T ss_pred eeecchHHHHHhhhcC
Confidence 9999999999999873
No 5
>PLN02266 endoglucanase
Probab=100.00 E-value=1e-81 Score=664.81 Aligned_cols=335 Identities=49% Similarity=0.839 Sum_probs=303.2
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCC-ccccccccCCCC
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSI-TVAQKYYRSISG 79 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~-~~~~~~Y~s~s~ 79 (479)
|+++||+|+|+.++||||+++++|||||+||||||++||+||++||+|||+||+||+++|+.|.+++ +...++|.+.++
T Consensus 173 ~~~~R~~y~i~~~~pgsd~a~e~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y~s~s~ 252 (510)
T PLN02266 173 MDTPRSVFKVDKNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFYCSYSG 252 (510)
T ss_pred cCCCCeeEEeCCCCCchHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCcccCCc
Confidence 6789999999999999999999999999999999999999999999999999999999999987654 345678987788
Q ss_pred cccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHH
Q 011712 80 YNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEY 159 (479)
Q Consensus 80 ~~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~ 159 (479)
|.||++|||+|||+||||++|+++++.+...++.. .....|+||+|..|+++||+++++.. ....++.|++.++.
T Consensus 253 ~~DEl~WAAawLy~ATGd~~Yl~~~~~~~~~~g~~-~~~~~~~WD~k~~ga~vLLa~~~~~~----~~~~~~~yk~~~d~ 327 (510)
T PLN02266 253 YQDELLWGAAWLHKATKNPTYLNYIQVNGQILGAD-EFDNTFGWDNKHVGARILLSKAFLVQ----KVQSLHEYKGHADN 327 (510)
T ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccc-ccCCccCcchhHHHHHHHHHHHHhhc----chHHHHHHHHHHHH
Confidence 99999999999999999999999998765544321 12357999999999999999876432 23567889999999
Q ss_pred HHHHhhCCCCC-ccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCC
Q 011712 160 FMCSCLGKGSR-NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGD 238 (479)
Q Consensus 160 ~~~~~~~~~~~-~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~ 238 (479)
++|.++.++++ .+++||||+.|+..||++||+++++||+++|+|++.++++.+.|.+......+|+++|++|||||||+
T Consensus 328 ~~~~~~~~~~~~~~~~TpGGL~~~~~wg~lrYa~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~ 407 (510)
T PLN02266 328 FICSVIPGAPFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGD 407 (510)
T ss_pred HHHhccCCCCCCccccCCCeeEEeCCCCcHHHHHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccC
Confidence 99988776543 56999999999999999999999999999999999877778899877778899999999999999999
Q ss_pred CCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccc
Q 011712 239 NPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQT 318 (479)
Q Consensus 239 Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~N 318 (479)
||+++|||||||.|+|++||||.++|+++...|..+.|.+|++ |++.+.+||++|.||||||||..|.|.|+|.+|++|
T Consensus 408 NP~~~SyvVG~G~~~P~~pHHR~as~p~~~~~~~~~~C~~g~~-~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~n 486 (510)
T PLN02266 408 NPLKMSYMVGYGPRYPRRIHHRGSSLPSVAAHPAKIQCSQGFS-IMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQS 486 (510)
T ss_pred CCCCCceEEecCCCCCccccccCCCCCCcccCccccCCCCCcc-ccCCCCCCcceecceeecCCCCCCCCCccccccccC
Confidence 9999999999999999999999999999988999999999986 888999999999999999999999999999999999
Q ss_pred cccccCCchHHHHHHHHhhcCCC
Q 011712 319 EPATYNNAPILGILARLNAGHGG 341 (479)
Q Consensus 319 EvaId~NA~lv~~la~l~~~~~~ 341 (479)
||||||||+||++||+|.+.+|+
T Consensus 487 Eva~dyNA~~vgalA~l~~~yg~ 509 (510)
T PLN02266 487 EPATYINAPLVGALAYLAHSYGQ 509 (510)
T ss_pred cceeecchHHHHHHHHHHHHhcC
Confidence 99999999999999999988764
No 6
>PLN02175 endoglucanase
Probab=100.00 E-value=1.2e-80 Score=652.22 Aligned_cols=329 Identities=44% Similarity=0.809 Sum_probs=295.1
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCcc-ccccccCCCC
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITV-AQKYYRSISG 79 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~-~~~~Y~s~s~ 79 (479)
|+++||+|+|++++||||+++++|||||+||||||++||+||++||+|||+||+||+++|+.|.++++. .++||.+.++
T Consensus 152 ~~~~R~~~~is~~~PGSd~aae~AAALAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~~Y~s~s~ 231 (484)
T PLN02175 152 MDTPRTVYSVSPSNPGSDVAAETAAALAAASMVFRKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSG 231 (484)
T ss_pred ccCccceEecCCCCCccHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHhCCCCcccCccccccCccccCCC
Confidence 688999999999999999999999999999999999999999999999999999999999999876543 4689988789
Q ss_pred cccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHH
Q 011712 80 YNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEY 159 (479)
Q Consensus 80 ~~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~ 159 (479)
+.||++|||+|||+||||++|++++..... .+...+|+||+|..|+++||+++.+.++. .-.+.|++.++.
T Consensus 232 y~DEl~WAAawLY~ATgd~~Yl~~~~~~~~-----~~~~~~~~Wd~k~~g~~vLla~~~~~~~~----~~~~~y~~~~~~ 302 (484)
T PLN02175 232 YKDELMWGASWLLRATNDPYYANFIKSLGG-----GDQPDIFSWDNKYAGAYVLLSRRALLNKD----SNFEQYKQAAEN 302 (484)
T ss_pred ccHHHHHHHHHHHHHhCCHHHHHHHHHcCC-----CCCCCccCCcCHHHHHHHHHHHhhhcCCC----chHHHHHHHHHH
Confidence 999999999999999999999999876321 11234799999999999999986543321 234578899999
Q ss_pred HHHHhhCCC-CCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCC
Q 011712 160 FMCSCLGKG-SRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGD 238 (479)
Q Consensus 160 ~~~~~~~~~-~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~ 238 (479)
++|.++.+. ...+.+|||||.|+..||++||+++++||+++|++++.+.+..+.|.+......+|++||++|||||||+
T Consensus 303 ~~~~~~~~~~~~~~~~TpgGL~~~~~wg~lrya~~~afla~~ya~~l~~~~~~~~cg~~~~~~~~~~~fA~~Q~~yiLG~ 382 (484)
T PLN02175 303 FICKILPDSPSSSTQYTQGGLMYKLPQSNLQYVTSITFLLTTYAKYMKSTKHTFNCGNSVIVPNALISLSKRQVDYILGD 382 (484)
T ss_pred HHHhccCCCCCccccccCCceEEECCCCcHHHHHHHHHHHHHHHHHHhhcccccccCCCccCHHHHHHHHHHhhhhhccC
Confidence 999887763 3478999999999999999999999999999999999877778999887778899999999999999999
Q ss_pred CCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccc
Q 011712 239 NPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQT 318 (479)
Q Consensus 239 Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~N 318 (479)
||+++|||||||.|+|++||||.++|+.....+..+.|.+|+. +++.+.+||++|.||||||||..|.|.|+|.+|++|
T Consensus 383 np~~~syvvG~g~n~p~~pHHR~AS~p~~~~~~~~~~C~~g~~-~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~dy~~n 461 (484)
T PLN02175 383 NPIKMSYMVGFSSNFPKRIHHRASSLPSHALRSNSLGCNGGFQ-SFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHA 461 (484)
T ss_pred CCCCCceEeecCCCCCCCccccccCCCcccccccccCCCCCcc-cccCCCCCcceecceeecCCCCCCCcCccccccccC
Confidence 9999999999999999999999999988776677789999987 566789999999999999999999999999999999
Q ss_pred cccccCCchHHHHHHHHhhcC
Q 011712 319 EPATYNNAPILGILARLNAGH 339 (479)
Q Consensus 319 EvaId~NA~lv~~la~l~~~~ 339 (479)
||||||||+||++||+|....
T Consensus 462 Eva~dyNA~~vgalA~l~~~~ 482 (484)
T PLN02175 462 EPATYINAAFVGPLAYFAAGR 482 (484)
T ss_pred cceeecchHHHHHHHHHhcCC
Confidence 999999999999999998754
No 7
>PLN02308 endoglucanase
Probab=100.00 E-value=1.7e-80 Score=654.81 Aligned_cols=331 Identities=51% Similarity=0.868 Sum_probs=296.4
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCcc-ccccccCCCC
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITV-AQKYYRSISG 79 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~-~~~~Y~s~s~ 79 (479)
|+++||+|+|+.+.||||+++++|||||+||||||++|++||++||+|||+||+||+++|+.|.++.+. ..++|.+.++
T Consensus 155 ~~~~R~~y~~~~~~pgSd~a~~~AAAlA~as~vf~~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~~~~~~Y~~~s~ 234 (492)
T PLN02308 155 MDTLRTVYKIDPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNG 234 (492)
T ss_pred cCCcceEEecCCCCCcchHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCcccCCCcCCCCc
Confidence 578999999999999999999999999999999999999999999999999999999999999776543 3578887678
Q ss_pred cccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHH
Q 011712 80 YNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEY 159 (479)
Q Consensus 80 ~~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~ 159 (479)
+.|||+|||+|||+||||++|++++..+...++.. +....|+||+|..|+++||+++.+.++ ...++.|++.+|.
T Consensus 235 ~~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~-~~~~~f~WD~k~~G~~~Lla~~~~~~~----~~~~~~~~~~ad~ 309 (492)
T PLN02308 235 YQDELLWGAAWLHKASRRREYREYIVKNEVILGAG-DTINEFGWDNKHAGINVLISKEVLMGK----AEYFQSFKQNADG 309 (492)
T ss_pred ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CCCcccccccHHHHHHHHHHHHHhcCc----hhHHHHHHHHHHH
Confidence 99999999999999999999999998754433322 223579999999999999998654332 3456789999999
Q ss_pred HHHHhhCCC-CCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCC
Q 011712 160 FMCSCLGKG-SRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGD 238 (479)
Q Consensus 160 ~~~~~~~~~-~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~ 238 (479)
|+|.++.+. ...+.+||+|+.|+..||++||++|++||+++|+|++..+.+.+.|........+|+++|++|||||||+
T Consensus 310 ~l~~~~~~~~~~~~~~TpgGl~~~~~~snlrya~naafLa~~ya~~l~~~~~~~~cg~~~~~~~~y~~fA~~QidYiLG~ 389 (492)
T PLN02308 310 FICSLLPGISHPQVQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGESTASPALLRQVAKRQVDYILGD 389 (492)
T ss_pred HHHHhccCCCCCcceeCCCeeEEeCCCchHHHHHHHHHHHHHHHHHHhhcCCccccCCCccCHHHHHHHHHhccceeccC
Confidence 999887652 2358999999999988999999999999999999998776667888777778899999999999999999
Q ss_pred CCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccc
Q 011712 239 NPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQT 318 (479)
Q Consensus 239 Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~N 318 (479)
||+++|||||||+|+|+|||||.+||+.+...|..+.|.+|+. |++.+.+||++|.||||||||..|+|.|+|.+|++|
T Consensus 390 NP~~~SYVVGfG~n~P~~pHHR~as~p~~~~~~~~~~c~~~~~-~~~~~~pnp~vL~GAlVGGPd~~d~y~D~r~~y~~n 468 (492)
T PLN02308 390 NPLRMSYMVGYGSRFPQRIHHRGSSLPSVAAHPARIGCKEGSR-YFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQS 468 (492)
T ss_pred CCCCCceEeccCCCCCCchhhcCCCCCCcccCccccCCCCCcc-ccCCCCCCcceeeceeecCCCCCCCCCccccccccC
Confidence 9999999999999999999999999998877888899999986 899999999999999999999999999999999999
Q ss_pred cccccCCchHHHHHHHHhh
Q 011712 319 EPATYNNAPILGILARLNA 337 (479)
Q Consensus 319 EvaId~NA~lv~~la~l~~ 337 (479)
||||||||+||++||+|..
T Consensus 469 Eva~dyNA~~vg~la~l~~ 487 (492)
T PLN02308 469 EPTTYINAPLVGLLAYFSA 487 (492)
T ss_pred ceeeehhhHHHHHHHHHhc
Confidence 9999999999999999984
No 8
>PLN02345 endoglucanase
Probab=100.00 E-value=3.3e-80 Score=649.22 Aligned_cols=330 Identities=48% Similarity=0.846 Sum_probs=294.0
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCc
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGY 80 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~ 80 (479)
|+++||+|+|+.++|||++++++|||||+||||||++||+||++||+|||+||+||+++|+.|..+.+...+||+| ++|
T Consensus 125 ~~~~R~~~~~~~~~pgsd~a~~~AAAlA~as~vfk~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~~~~~Y~s-~~~ 203 (469)
T PLN02345 125 MDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFKSSDSTYSDTLLKHAKQLFNFADKYRGSYSESIPEVQDYYNS-TGY 203 (469)
T ss_pred cCCcceEEecCCCCCCcHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCccCCCCCC-ccc
Confidence 6789999999999999999999999999999999999999999999999999999999999998776667789997 899
Q ss_pred ccHHHHHHHHHHHHhCChhHHHHHhh-cCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCC---CCchHHHHHHHHH
Q 011712 81 NDELLWAAAWLYQASGNQHYLDYLGK-NGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKA---GHYAPVFERYQQK 156 (479)
Q Consensus 81 ~DE~~wAAaeLy~aTGd~~Yl~~~~~-~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~---~~~~~~~~~~~~~ 156 (479)
.|||+|||+|||+||||++|++++.. +...+...+. ...|+||+|..|+++||+++++.++. ..++..++.|+..
T Consensus 204 ~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~-~~~~~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~y~~~ 282 (469)
T PLN02345 204 GDELLWAASWLYHATGDKTYLAYVTGKNGKEFADWGS-PTWFSWDDKLAGTQVLLSRLTFFGPKGASNTVNSGLQMYKKT 282 (469)
T ss_pred ccHHHHHHHHHHHHhCCHHHHHHHHhhhhhhhcccCC-CceecCcchHHHHHHHHHHHhhccCccccchhhHHHHHHHHH
Confidence 99999999999999999999999953 2222222111 24599999999999999998754332 1234567899999
Q ss_pred HHHHHHHhhCCCC-CccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhcc-CccccCCCCCChHHHHHHHHhcccc
Q 011712 157 AEYFMCSCLGKGS-RNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAG-RDLKCSAGNVAPAELLGFAKSQVDY 234 (479)
Q Consensus 157 a~~~~~~~~~~~~-~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~-~~~~~~~~~~~~~~y~~~a~~qidY 234 (479)
++.++|.++.+.+ .++.+||+||.|+..||++||+++++||+++|++++.+.. ..+.|........+|++||++||||
T Consensus 283 ~~~~~~~~~~~~~~~~~~~TpgGl~~~~~wgslrya~~~afla~vya~~l~~~~~~~~~c~~~~~~~~~~~~fA~~QidY 362 (469)
T PLN02345 283 AEAVMCGLLPDSPTATTSRTDGGLIWVSEWNALQHAVNSAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKSQADY 362 (469)
T ss_pred HHHHHHHhcCCCCCccccccCCeeEEeCCCchHHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHHHHHHHHHHH
Confidence 9999999887744 3678999999999999999999999999999999986554 5688987778899999999999999
Q ss_pred ccCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCC
Q 011712 235 ILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDN 314 (479)
Q Consensus 235 iLG~Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~ 314 (479)
|||+||+++|||||||.|+|++||||++||+. +..+.|.+|+. |++.+.+||++|.||||||||..|.|.|+|.+
T Consensus 363 iLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~----~~~~~c~~g~~-~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~ 437 (469)
T PLN02345 363 ILGKNPMKMSYLVGYGDKYPQYVHHRGASIPA----DAKTGCKDGFK-WLHSSEPNPNVATGALVGGPFQNDTFVDSRDN 437 (469)
T ss_pred HhcCCCCCcceEeecCCCCCCCcccccCCCCC----CCCcCCCCCcc-cccCCCCCCceeccceecCCCccCCccccccc
Confidence 99999999999999999999999999999975 35689999996 89999999999999999999999999999999
Q ss_pred cccccccccCCchHHHHHHHHhh
Q 011712 315 YEQTEPATYNNAPILGILARLNA 337 (479)
Q Consensus 315 y~~NEvaId~NA~lv~~la~l~~ 337 (479)
|++|||++++||+||++||+|..
T Consensus 438 y~~nEva~y~nA~~vg~la~l~~ 460 (469)
T PLN02345 438 SMQNEPTTYNSALLVGLLSSLVT 460 (469)
T ss_pred cccccceeehhhHHHHHHHHHhc
Confidence 99999998888999999999995
No 9
>PLN02909 Endoglucanase
Probab=100.00 E-value=2e-79 Score=644.23 Aligned_cols=322 Identities=46% Similarity=0.793 Sum_probs=289.6
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCc
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGY 80 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~ 80 (479)
|+++||+|+|+.++|||++++++|||||+||||||++||+||++||+|||++|+||++||+.|..+ .+||.+.++|
T Consensus 163 ~~~~R~~~~i~~~~pgtd~a~~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~----~~~y~s~s~y 238 (486)
T PLN02909 163 MKTPRTVLEIDEKTPGTEIAAETAAAMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDGE----CPFYCSYSGY 238 (486)
T ss_pred ccCCceeEecCCCCCCcHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCCCcCCC----CCccccCCCc
Confidence 678999999999999999999999999999999999999999999999999999999999988642 4688877889
Q ss_pred ccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH
Q 011712 81 NDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF 160 (479)
Q Consensus 81 ~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~~ 160 (479)
.|||+|||+|||++|||++|++++..... . .....|+||++..|+++||+++.+.+ +..++.|++.+|.+
T Consensus 239 ~DEl~WAAawLy~aTgd~~Yl~~~~~~~~-~----~~~~~~sWD~k~~g~~~lLa~~~~~~-----~~~~~~y~~~ad~~ 308 (486)
T PLN02909 239 NDELLWAATWLYKATKKQMYLKYIKHEAI-S----ASVAEFSWDLKYAGAQVLLSKLNFEG-----EKGLQSYKQQADSF 308 (486)
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHhccc-c----cCCCccCCcccccHHHHHHHHhhccc-----chhHHHHHHHHHHH
Confidence 99999999999999999999999876321 1 11246999999999999998864322 13457899999999
Q ss_pred HHHhhCCCCC-ccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCCC
Q 011712 161 MCSCLGKGSR-NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDN 239 (479)
Q Consensus 161 ~~~~~~~~~~-~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~N 239 (479)
+|.+++++++ .+.+||+|+.|...|||+||+++++||+++|++++.+....+.|....+++.+|+++|++|||||||+|
T Consensus 309 ~~~~~~~~~~~~~~~TpgGl~~~~~wgn~rya~~aafLa~~ya~~l~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~N 388 (486)
T PLN02909 309 VCSVLPGSPFHQVFITPGGMIHLRDGANSQYVTSTAFLFSVYSDILRRHNQKVMCGNQQFDSTRLMAFAKQQIDYLLGAN 388 (486)
T ss_pred HHHhccCCCCcccccCCCceeEecCCChHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCHHHHHHHHHHHHHHhcCCC
Confidence 9987776554 567899999999999999999999999999999987666779998777789999999999999999999
Q ss_pred CCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCccccc
Q 011712 240 PRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTE 319 (479)
Q Consensus 240 p~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NE 319 (479)
|+++|||||||.|+|++||||.+||+.+.. +..+.|.+||.+|++.+.+||++|.||||||||..|.|.|+|.+|++||
T Consensus 389 P~~~SYVVGfG~n~P~~pHHR~as~~~~~~-~~~~~c~~g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nE 467 (486)
T PLN02909 389 PQGRSYMVGFGPNPPKQPHHRGASVPVLPA-NTPVNCGLSFVEWFNKDRPNPNELTGAIVGGPDRQDNFVDKRWNSSYTE 467 (486)
T ss_pred CCCCceEeccCCCCcCCccccccCCCCccc-CcccCCCCcccccccCCCCCcceeccceecCCCCCCCccccccccccCc
Confidence 999999999999999999999999987433 6789999999999999999999999999999999999999999999999
Q ss_pred ccccCCchHHHHHHHHhh
Q 011712 320 PATYNNAPILGILARLNA 337 (479)
Q Consensus 320 vaId~NA~lv~~la~l~~ 337 (479)
|||||||+||++||+|..
T Consensus 468 ~a~dyNA~~vg~lA~l~~ 485 (486)
T PLN02909 468 PCTYINSLAVGVLAKLAA 485 (486)
T ss_pred ceeecchHHHHHHHHHhc
Confidence 999999999999999975
No 10
>PLN02613 endoglucanase
Probab=100.00 E-value=6.1e-79 Score=643.01 Aligned_cols=329 Identities=47% Similarity=0.853 Sum_probs=297.5
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCc
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGY 80 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~ 80 (479)
|+++||+|+++.++|||++++++|||||+||||||++||+||++||+|||+||+||+++|+.|.++ .++|.+.++|
T Consensus 155 ~~~~R~~~~~t~~~pgTd~a~~~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~~a~~~~g~y~~~----~~~y~s~s~~ 230 (498)
T PLN02613 155 MDTPRTLYKITSSSPGSEAAGEAAAALAAASLVFKDVDSSYSSKLLNHARSLFEFADKYRGSYQAS----CPFYCSYSGY 230 (498)
T ss_pred cCCCCeeEecCCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCCcCCC----CCcccccCcc
Confidence 678999999999999999999999999999999999999999999999999999999999998653 4688776789
Q ss_pred ccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH
Q 011712 81 NDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF 160 (479)
Q Consensus 81 ~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~~~ 160 (479)
.||++|||+|||++|||++|+++++.+..... ....|+||++..|+++|+++..+++. ...+.|+..++.+
T Consensus 231 ~DEl~WAAawLy~aTGd~~Yl~~~~~~~~~~~----~~~~~~Wd~~~~G~~vLla~~~~~~~-----~~~~~yk~~~e~~ 301 (498)
T PLN02613 231 QDELLWAAAWLYKATGEKKYLNYVISNKGWSQ----AVNEFSWDNKFAGAQALLASEFYGGA-----NDLAKFKTDVESF 301 (498)
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHhcccccc----CCCccCccchHHHHHHHHHHHHhcCc-----chHHHHHHHHHHH
Confidence 99999999999999999999999987642211 12468999999999999998755422 3356788999999
Q ss_pred HHHhhCCC-CCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhcc-CccccCCCCCChHHHHHHHHhccccccCC
Q 011712 161 MCSCLGKG-SRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAG-RDLKCSAGNVAPAELLGFAKSQVDYILGD 238 (479)
Q Consensus 161 ~~~~~~~~-~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~-~~~~~~~~~~~~~~y~~~a~~qidYiLG~ 238 (479)
+|.++.+. ..++.+||+|+.|...||++||++|++||+++|++++.++. +.+.|........+|++||++|||||||+
T Consensus 302 ~~~~~~~~~~~~~~~TPgGL~~~~~wg~lry~~~~afla~~ya~~l~~~~~~~~~c~~~~~~~~~~~~~a~~Qi~yiLG~ 381 (498)
T PLN02613 302 VCALMPGSSSVQIKTTPGGLLFTRDSSNLQYVTTATTVLFIYSKTLTKAGVGGIQCGSAQFSASQIRNFAKSQVDYILGN 381 (498)
T ss_pred HHHhccCCCCcccccCCCceEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHhHHHhcCC
Confidence 99888763 44689999999999999999999999999999999987654 56899877777899999999999999999
Q ss_pred CCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccc
Q 011712 239 NPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQT 318 (479)
Q Consensus 239 Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~N 318 (479)
||.++|||||||.|+|++||||.++|+.+...|..+.|.+|++.|++.+.|||+++.||||||||..|.|.|+|++|++|
T Consensus 382 Np~~~syvvG~G~n~P~~pHHR~as~p~~~~~~~~~~c~~g~~~~~~~~~Pnp~~l~GAlVGGPd~~D~y~D~r~~y~~n 461 (498)
T PLN02613 382 NPMKMSYMVGFGTKYPTQIHHRGSSIPSIQVLPEKVDCNGGFSSYYNSDTPNPNVHVGAIVGGPDSNDQYSDKRSDYSHA 461 (498)
T ss_pred CCCCCcceeccCCCCCCcccccccCCCccccCccccCCCCCccccccCCCCCCceeeeeeecCCCcCCCccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCchHHHHHHHHhhcCCCC
Q 011712 319 EPATYNNAPILGILARLNAGHGGY 342 (479)
Q Consensus 319 EvaId~NA~lv~~la~l~~~~~~~ 342 (479)
||||||||+||++||+|.......
T Consensus 462 Eva~dyNA~~vgalA~l~~~~~~~ 485 (498)
T PLN02613 462 EPTTYINAAFVGSVAALIKQVSRL 485 (498)
T ss_pred cceeecccHHHHHHHHHHHhhccc
Confidence 999999999999999999776554
No 11
>PLN03009 cellulase
Probab=100.00 E-value=1.5e-78 Score=642.59 Aligned_cols=334 Identities=47% Similarity=0.866 Sum_probs=296.1
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCC---ccccccccCC
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSI---TVAQKYYRSI 77 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~---~~~~~~Y~s~ 77 (479)
|+++||+|.|+.++|||++++++|||||+||||||++||+||++||+|||+||+||+++|+.|.++. +...+||.++
T Consensus 156 ~~~~R~~~~is~~~p~sd~a~~~AAalA~as~vfk~~D~~YA~~ll~~Ak~ly~~a~~~~g~y~~~~~~~~g~~~~Y~~~ 235 (495)
T PLN03009 156 MDTPRTVYAVNAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRNAIKTFQFADMYRGAYSDNDDIKDGVCPFYCDF 235 (495)
T ss_pred cCCCCeEEEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCccccCccccCcCCc
Confidence 5788999999999999999999999999999999999999999999999999999999999997653 2345678876
Q ss_pred CCcccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHH
Q 011712 78 SGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKA 157 (479)
Q Consensus 78 s~~~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a 157 (479)
+++.||++|||+|||+||||++|+++++.+...++.. ....+|+||++..|+++|+++..+.+. ...++.|++.+
T Consensus 236 s~~~DE~~WAAawLy~aTgd~~Yl~~~~~~~~~~~~~-~~~~~~~Wd~~~~g~~~lla~~~~~~~----~~~~~~~~~~a 310 (495)
T PLN03009 236 DGYQDELLWGAAWLRRASGDDSYLNYIENNGETLGAN-DNINEFGWDNKHAGLNVLVSKEVLEGN----MYSLQSYKASA 310 (495)
T ss_pred ccccHHHHHHHHHHHHHhCCHHHHHHHHHhhhhhcCC-CCCCCCCCccHHHHHHHHHHHhhhccc----hhHHHHHHHHH
Confidence 7799999999999999999999999998755433221 123469999999999998887644221 12357899999
Q ss_pred HHHHHHhhCC-CCCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhcccccc
Q 011712 158 EYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYIL 236 (479)
Q Consensus 158 ~~~~~~~~~~-~~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiL 236 (479)
|.++|.+..+ .++++++||+|+.|...|+|++|+++++||+++|++++......+.|..+..+..+|+++|++||||||
T Consensus 311 d~~~~~~~~~~~~~~v~~t~~g~~~~~~~sn~~~a~~aafl~l~yA~~l~~~~~~~~~~~~~~~~~~y~~~A~~Q~dYiL 390 (495)
T PLN03009 311 DSFMCTLIPESSSSHVEYTPGGLIYKPGGSNLQHATTISFLLLVYANYLSRSSQSVNCGNLTIGPDSLRQQAKRQVDYIL 390 (495)
T ss_pred HHHHHHhcccCCCCccccCCCCeEEeCCCChHHHHHHHHHHHHHHHHHhhhcccccccccCcCCHHHHHHHHHHHHHHhc
Confidence 9999987654 567899999999998889999999999999999999987666678898877889999999999999999
Q ss_pred CCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcc
Q 011712 237 GDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYE 316 (479)
Q Consensus 237 G~Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~ 316 (479)
|+||+++|||||||.|+|+|||||.++++.+..+|..+.|.+|+. |++.+.++|++|+|+||||||..|+|.|+|++|+
T Consensus 391 G~Np~~~SYVvGyG~~~p~~pHHR~as~~~~~~~~~~~~c~~g~~-~~~~~~p~p~vl~GaLVGGP~~~d~y~D~r~~y~ 469 (495)
T PLN03009 391 GDNPMGLSYMVGYSERYPQRIHHRGSSLPSIKDHPEAIACKEGSV-YFNSSNPNPNVLVGAVVGGPGEDDSYEDDRDDFR 469 (495)
T ss_pred CCCCCCCceEecCCCCCcCchhhccccCCccccccccccCccCcc-ccCCCCCCCCcccceEeeCCCCCCCCCccccccc
Confidence 999999999999999999999999999988777788899999997 8999999999999999999999999999999999
Q ss_pred cccccccCCchHHHHHHHHhhcCC
Q 011712 317 QTEPATYNNAPILGILARLNAGHG 340 (479)
Q Consensus 317 ~NEvaId~NA~lv~~la~l~~~~~ 340 (479)
+||||||||||||++||+|....+
T Consensus 470 ~NEvaidyNA~lv~~lA~l~~~~~ 493 (495)
T PLN03009 470 KSEPTTYINAPFVGVLAYFAANPG 493 (495)
T ss_pred ccchhhhhhHHHHHHHHHHhcCCC
Confidence 999999999999999999997543
No 12
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 9 GH9 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family E. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1RQ5_A 1CLC_A 3H7L_B 1K72_B 1G87_B 1GA2_A 1KFG_A 1UT9_A 2YIK_A 3RX5_A ....
Probab=100.00 E-value=1.5e-66 Score=551.07 Aligned_cols=306 Identities=42% Similarity=0.705 Sum_probs=246.4
Q ss_pred CCCCCceeEeCCCCCChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCC-ccccccccCCCC
Q 011712 1 MTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSI-TVAQKYYRSISG 79 (479)
Q Consensus 1 m~~~Rp~y~~~~~~pgsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~-~~~~~~Y~s~s~ 79 (479)
|+..||.++++...|||++++++|||||+||||||++||+||++||++|+++|+||+++|+.|.++. +...++|++ ++
T Consensus 137 ~~~~~~~~~~~~~~~~t~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~~~~~~~~~~~~~Y~~-~~ 215 (444)
T PF00759_consen 137 MPDDDPSYRYDAPNPGTDATAEFAAALAAASRVFKDFDPAYAAQCLKAAKEAYAFAKKNPGVYSDNPQPNGGGFYNS-SG 215 (444)
T ss_dssp TGSGESEEEEETTB-EHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSTTHGGGTSTCTTTTTSHC-S-
T ss_pred CCCCCCcceEecCCCchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCcccccCCcccC-CC
Confidence 5678999999999999999999999999999999999999999999999999999999999876654 567899997 89
Q ss_pred cccHHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCc-cccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHH
Q 011712 80 YNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGM-TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAE 158 (479)
Q Consensus 80 ~~DE~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~-~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~a~ 158 (479)
+.||++|||+|||++|||++|+++++++...+....+.. ..|+||++..+++++|++.....+ ..+...+.+++.++
T Consensus 216 ~~De~~wAA~~Ly~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~la~~~~~~~--~~~~~~~~~~~~~~ 293 (444)
T PF00759_consen 216 YEDELAWAAAELYRATGDESYLDYAKEYYDDLEASQWSNEWSFSWDNKAAGAQLLLAKLTNDDP--SRDAAREQYKSAAD 293 (444)
T ss_dssp SHHHHHHHHHHHHHHHT-HHHHHHHHHHCCTSSBSTTSSSSSSCTTBSHHHHHHHHHHHHCCSC--HHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhcCcHHHHHHHHHhHHhhcccccccccccchhhhhhhhhHHHHhcccchh--hhHHHHHHHHHHHH
Confidence 999999999999999999999999999876553222222 369999999999998887753222 12235778888888
Q ss_pred HHHHHhhCCCCCccccCCCCceeeccCchHHHHHHHHHHHHHHHHHHhhccCccccCCCCCChHHHHHHHHhccccccCC
Q 011712 159 YFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGD 238 (479)
Q Consensus 159 ~~~~~~~~~~~~~~~~tp~g~~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~ 238 (479)
.+++.........+.++|+|+.|.+.||+++++++++||+++|+++-. .++.+|+++|++|||||||+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~g~~~~~~WGs~~~~~~~a~l~~~~~~~~~------------~~~~~y~~~a~~qldyiLG~ 361 (444)
T PF00759_consen 294 KFLNKWLNDGYGSVPYTPGGLAWIYEWGSNRYAANAAFLALAYAKYDL------------TGDQEYRDFAQSQLDYILGR 361 (444)
T ss_dssp HHHHHHHHSTTTBSEBCTTSSBESESTTHHHHHHHHHHHHHHHHHTCH------------CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhccCCCcccCccccccccCCCccHHHHHHHHHHHHHHhccc------------CChHHHHHHHHHHhhhhcCc
Confidence 888876654333477899999999999999999999999999985411 46899999999999999999
Q ss_pred CCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCCcccccCCCCCCCCCccceEecCCCCCCCCCccCCCcccc
Q 011712 239 NPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQT 318 (479)
Q Consensus 239 Np~~~SyVtG~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~N 318 (479)
||+++|||||||.|+|++||||.++.. | +++++...+.+|+++|+|+||||||..|+|+|+|.+|++|
T Consensus 362 Np~~~SyV~G~G~~~p~~pHHr~~s~~----------~--~~~~~~~~~~pn~~~l~GalvGGP~~~~~y~D~~~~~~~n 429 (444)
T PF00759_consen 362 NPFGQSYVTGYGENSPQHPHHRASSAH----------C--SWDDGINSPPPNPHVLYGALVGGPNSADSYVDDRSSYSTN 429 (444)
T ss_dssp STT--BSBTTSSSSBBSS-B-HHCHHH----------T--CCSSTSTSSSS-SS--TT-BBS-SSTTS----STT-TTTH
T ss_pred CCCCceeeecCCCCCCCCCcCchhhcc----------c--cccccCCCCCCCccCccccccCCCCccCCccCCCcccccc
Confidence 999999999999999999999997610 1 2334556778899999999999999999999999999999
Q ss_pred cccccCCchHHHHHH
Q 011712 319 EPATYNNAPILGILA 333 (479)
Q Consensus 319 EvaId~NA~lv~~la 333 (479)
||||||||+||++||
T Consensus 430 Evaid~NA~l~~~lA 444 (444)
T PF00759_consen 430 EVAIDYNAPLVGALA 444 (444)
T ss_dssp BBBHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhC
Confidence 999999999999997
No 13
>PF09478 CBM49: Carbohydrate binding domain CBM49; InterPro: IPR019028 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity. A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This domain is found at the C-terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose []. ; GO: 0030246 carbohydrate binding, 0005576 extracellular region
Probab=99.88 E-value=2.3e-22 Score=163.94 Aligned_cols=79 Identities=43% Similarity=0.865 Sum_probs=75.0
Q ss_pred eEEEEeeecccccCCeEEEEEEEEEEeCCCCcceeeEEEecCCCCCccccEe-cCCeeecCCCcccCCCCCeEEEEEEec
Q 011712 387 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN-LGNAYGFPSWLNNLAAGKSLEFVYIHT 465 (479)
Q Consensus 387 ~~i~q~~~~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~-~~n~~~lPs~~~~i~~g~s~~FGyI~~ 465 (479)
|+|+|+++++|.++|++|+||+|+|+|+|+++|+++.|.++++.++||||++ .++.|+||+|+.+|+||++|+||||+.
T Consensus 1 i~i~q~~~~sW~~~g~~y~qy~v~I~N~~~~~I~~~~i~~~~l~~~iW~l~~~~~~~y~lPs~~~~i~pg~s~~FGYI~~ 80 (80)
T PF09478_consen 1 ITITQTLVNSWTENGQTYTQYDVTITNNGSKPIKSLKISIDNLYGSIWGLDKVSGNTYTLPSYQPTIKPGQSFTFGYISQ 80 (80)
T ss_pred CEEEEEEEeEEEeCCEEEEEEEEEEEECCCCeEEEEEEEECccchhheeEEeccCCEEECCccccccCCCCEEEEEEEeC
Confidence 6899999999999999999999999999999999999999976689999999 667999999999999999999999973
No 14
>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....
Probab=98.98 E-value=8e-10 Score=94.08 Aligned_cols=77 Identities=22% Similarity=0.417 Sum_probs=66.2
Q ss_pred eEEEEeeecccccCCeEEEEEEEEEEeCCCCcceeeEEEecCC----CCCccccEe--cCC--eeecCCCcccCCCCCeE
Q 011712 387 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKL----YGPLWGLTN--LGN--AYGFPSWLNNLAAGKSL 458 (479)
Q Consensus 387 ~~i~q~~~~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~~~----~~~iW~v~~--~~n--~~~lPs~~~~i~~g~s~ 458 (479)
|+++.+++++|.+| ++.+|+|+|++..+|++|+|.++.. +.++||.+. .++ .++.++|+..|+||++.
T Consensus 1 ctv~~~v~~~W~~G----f~~~v~v~N~~~~~i~~W~v~~~~~~~~~i~~~Wna~~s~~g~~~~v~~~~wn~~i~~G~s~ 76 (101)
T PF00553_consen 1 CTVTYTVTNSWGGG----FQGEVTVTNNGSSPINGWTVTFTFPSGQTITSSWNATVSQSGNTVTVTNPSWNGTIAPGGSV 76 (101)
T ss_dssp EEEEEEEEEESSSE----EEEEEEEEESSSSTEESEEEEEEESTTEEEEEEESCEEEEETTEEEEEESSTCSEEEESEEE
T ss_pred CEEEEEEecccCCC----eEEEEEEEECCCCccCCEEEEEEeCCCCEEeeeeccEEEecCCEEEEEcCCcCcccCCCCeE
Confidence 67888999999888 9999999999999999999988842 467999865 556 55679999999999999
Q ss_pred EEEEEecCC
Q 011712 459 EFVYIHTAN 467 (479)
Q Consensus 459 ~FGyI~~~~ 467 (479)
+|||+..+.
T Consensus 77 ~~Gf~~~~~ 85 (101)
T PF00553_consen 77 TFGFQASGS 85 (101)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEeCC
Confidence 999997664
No 15
>smart00637 CBD_II CBD_II domain.
Probab=98.54 E-value=3.7e-07 Score=76.21 Aligned_cols=68 Identities=22% Similarity=0.392 Sum_probs=56.8
Q ss_pred cccccCCeEEEEEEEEEEeCCCCcceeeEEEecC----CCCCccccEe--cCCee--ecCCCcccCCCCCeEEEEEEe-c
Q 011712 395 TSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNAY--GFPSWLNNLAAGKSLEFVYIH-T 465 (479)
Q Consensus 395 ~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~~----~~~~iW~v~~--~~n~~--~lPs~~~~i~~g~s~~FGyI~-~ 465 (479)
++|..+ ++.+|+|+|++..+|.+|.|.++. .+.++||.+. .++.| +-++|+..|+||++.+|||+. .
T Consensus 2 ~~W~~G----~~~~v~vtN~~~~~~~~W~v~~~~~~~~~i~~~Wn~~~~~~g~~~~~~~~~wn~~i~~G~s~~~gf~~~~ 77 (92)
T smart00637 2 SDWGSG----FTANVTVTNTGSSAINGWTVTFDLPGGQTVTNSWNATVSQSGGHVTATNASWNGTIAPGGSVSFGFQGKT 77 (92)
T ss_pred CcCCCC----EEEEEEEEeCCCCcccCeEEEEEcCCCcEEeeeEEEEEEecCCEEEEecCccccccCCCCEEEEEEEecC
Confidence 679887 899999999999999999997773 2567999975 44444 556999999999999999999 5
Q ss_pred C
Q 011712 466 A 466 (479)
Q Consensus 466 ~ 466 (479)
|
T Consensus 78 G 78 (92)
T smart00637 78 G 78 (92)
T ss_pred C
Confidence 5
No 16
>PF06483 ChiC: Chitinase C; InterPro: IPR009470 This ~170 aa region is found at the C-terminal to the catalytic domain (IPR001223 from INTERPRO) found in members of glycoside hydrolase family 18.
Probab=96.66 E-value=0.011 Score=54.76 Aligned_cols=88 Identities=20% Similarity=0.362 Sum_probs=61.3
Q ss_pred CceEEEEeeecccccCCeEE-EEEEEEEEeCCCCcc-eeeEEEecCC--------CCCccccEe--cC------------
Q 011712 385 GAIAIQQKLTTSWISNGKRY-YRYSTIVTNKSAKTL-KNLKLSISKL--------YGPLWGLTN--LG------------ 440 (479)
Q Consensus 385 ~~~~i~q~~~~sW~~~~~~y-~q~~v~i~N~~~~~i-~~~~i~~~~~--------~~~iW~v~~--~~------------ 440 (479)
..|.|.-. .+.|.-|..+| .+-+++|+|++.++| -+.+|.+|-. .++=|++.. ++
T Consensus 34 ~~ldv~v~-~~gf~~GD~NYPI~Pkl~iTNns~~~iPGGt~~~FD~ptSa~~~~kdqSG~g~~vi~sght~~g~NiGGL~ 112 (180)
T PF06483_consen 34 EALDVSVS-FTGFKLGDSNYPINPKLTITNNSGQTIPGGTEFEFDYPTSAPDNAKDQSGFGLKVISSGHTAAGNNIGGLK 112 (180)
T ss_pred ceEEEEEE-eCCcccCCCCCCcCCcEEEEcCCCcccCCccEEEEccccCCccccccccCCcEEEEecCCcccCCcccccC
Confidence 55666644 46677665555 378999999999999 4788888721 234566632 21
Q ss_pred -C----eeecCCCcccCCCCCeEEEEEEecC---CCceEEEE
Q 011712 441 -N----AYGFPSWLNNLAAGKSLEFVYIHTA---NAADVSVS 474 (479)
Q Consensus 441 -n----~~~lPs~~~~i~~g~s~~FGyI~~~---~~a~~~v~ 474 (479)
+ .++||+|+ +|+||+++++-++-.= .|+|++|.
T Consensus 113 gdfHrvs~tlp~wq-slapG~s~~~~~~YyLPiSgPsN~tv~ 153 (180)
T PF06483_consen 113 GDFHRVSFTLPAWQ-SLAPGASVELDMVYYLPISGPSNFTVN 153 (180)
T ss_pred CceEEEEEECCCcc-ccCCCCEEEEeEEEEeccCCCceEEEE
Confidence 1 37999997 6999999999887322 28888874
No 17
>COG5297 CelA Cellobiohydrolase A (1,4-beta-cellobiosidase A) [Carbohydrate transport and metabolism]
Probab=96.64 E-value=0.0073 Score=61.56 Aligned_cols=75 Identities=20% Similarity=0.343 Sum_probs=58.7
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCCcceeeEEEec--CCCCCccccE--ecCCee--ecCCCcccCCCCCeE
Q 011712 385 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSIS--KLYGPLWGLT--NLGNAY--GFPSWLNNLAAGKSL 458 (479)
Q Consensus 385 ~~~~i~q~~~~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~--~~~~~iW~v~--~~~n~~--~lPs~~~~i~~g~s~ 458 (479)
.+|+++-++.+.|..| +--+|.|+|+++++ +.|...+. ..++.+|+.+ ++++.+ +=-.|+.+|.|++..
T Consensus 462 ~ni~~~i~~~~~w~~g----~cerv~vtnt~ss~-s~w~~t~~~kg~iq~lw~a~ws~~gd~l~asg~d~nktl~png~~ 536 (544)
T COG5297 462 KNITSSITVDSDWHTG----YCERVKVTNTGSSR-SSWTVTIPLKGTIQTLWSATWSLSGDKLIASGLDWNKTLEPNGTT 536 (544)
T ss_pred cCceeEEEeccccccc----ceeEEEeeccCCCC-cceEEEEeeccchhhhhhccccccCCeeeeeccccccccCCCCcc
Confidence 6688898999999988 55779999999876 56666655 3466788885 356644 344899999999999
Q ss_pred EEEEEe
Q 011712 459 EFVYIH 464 (479)
Q Consensus 459 ~FGyI~ 464 (479)
+|||..
T Consensus 537 efgfc~ 542 (544)
T COG5297 537 EFGFCA 542 (544)
T ss_pred eeeccc
Confidence 999974
No 18
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=94.44 E-value=0.12 Score=57.15 Aligned_cols=86 Identities=22% Similarity=0.177 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHc--cCCCCCCCccccccccCCCCcccHHHHHHHHHHHH
Q 011712 17 SDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKY--RGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQA 94 (479)
Q Consensus 17 sd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~--pg~y~~~~~~~~~~Y~s~s~~~DE~~wAAaeLy~a 94 (479)
|+.-|.+++|||-|+|+|.+ .+++++|+++.+|..++ .+......-.+..-|..-..+.-=++||.++||.+
T Consensus 410 t~wNglmi~aLa~a~~~~~d------~~~l~~A~~~~~fi~~~l~~~rl~~~~~~G~a~~~g~leDYA~~i~gll~lye~ 483 (667)
T COG1331 410 TDWNGLMIAALAEAGRVLGD------PEYLEAAERAADFILDNLYVDRLLRRYRGGEAAVAGLLEDYAFLILGLLALYEA 483 (667)
T ss_pred eccHHHHHHHHHHHHHHcCC------hHHHHHHHHHHHHHHHhhcccchheeeecCcccccccchhHHHHHHHHHHHHHh
Confidence 55678999999999999985 36888999999988764 11110000001111211122233577999999999
Q ss_pred hCChhHHHHHhhcC
Q 011712 95 SGNQHYLDYLGKNG 108 (479)
Q Consensus 95 TGd~~Yl~~~~~~~ 108 (479)
|+|.+||+.+.+..
T Consensus 484 t~d~~yL~~A~~L~ 497 (667)
T COG1331 484 TGDLAYLEKAIELA 497 (667)
T ss_pred hCcHHHHHHHHHHH
Confidence 99999999987644
No 19
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms]
Probab=89.65 E-value=1 Score=45.76 Aligned_cols=69 Identities=26% Similarity=0.307 Sum_probs=52.9
Q ss_pred HHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChh
Q 011712 22 ETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYR--GKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQH 99 (479)
Q Consensus 22 ~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~p--g~y~~~~~~~~~~Y~s~s~~~DE~~wAAaeLy~aTGd~~ 99 (479)
.+|-+||.|+.||+ ...|-+...+.|+-.|+.+--.+ |..+. .+++.| +=+-|||+|+|.+
T Consensus 284 Gv~~~L~kAy~VF~--Eekyl~aa~ecadvVW~rGlLkkg~GichG---vaGNaY------------vFLsLyRLT~d~k 346 (403)
T KOG2787|consen 284 GVAYTLAKAYQVFK--EEKYLEAAMECADVVWKRGLLKKGVGICHG---VAGNAY------------VFLSLYRLTGDMK 346 (403)
T ss_pred hHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhhhhhcCCccccc---ccCchh------------hhHhHHHHcCcHH
Confidence 47788999999999 57899999999999999876544 44332 233333 5578999999999
Q ss_pred HHHHHhhc
Q 011712 100 YLDYLGKN 107 (479)
Q Consensus 100 Yl~~~~~~ 107 (479)
||-.+++.
T Consensus 347 YlyRA~kF 354 (403)
T KOG2787|consen 347 YLYRAKKF 354 (403)
T ss_pred HHHHHHHH
Confidence 99987663
No 20
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=89.24 E-value=0.74 Score=48.15 Aligned_cols=78 Identities=23% Similarity=0.327 Sum_probs=41.7
Q ss_pred HHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH----ccC--CCCCCCcccc--ccccCCCCc---ccHHHHHHHHHHHH
Q 011712 26 AMAAASIVFRHSDPAYSSELLRHAYQLFDFADK----YRG--KYDGSITVAQ--KYYRSISGY---NDELLWAAAWLYQA 94 (479)
Q Consensus 26 alA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~----~pg--~y~~~~~~~~--~~Y~s~s~~---~DE~~wAAaeLy~a 94 (479)
++.+++|+++-.+.+ ++|+.|+++|+|... .+. .+.+.+.... .-. +...| .-=++-|+++||++
T Consensus 160 ~~~laarL~~~t~~~---~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg~~~~~~c~~~-~~~~~TYNqG~~l~a~~~Ly~~ 235 (370)
T PF03663_consen 160 AAQLAARLYRITGDQ---TYLDWAKKIYDWMRDSGLIDPSTGLVYDGINIDGNCTNI-NKTKWTYNQGVFLGAAAYLYNA 235 (370)
T ss_dssp HHHHHHHHHHHH--H---HHHHHHHHHHHHHHH-HHB--TTS-B--EE-TTSSS-B--TT---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCh---HHHHHHHHHHHHhhcceeEECCCcEEEeCCccCCCCCcC-CCceechHHHHHHHHHHHHHHh
Confidence 334445555543333 699999999999998 232 3333221010 010 00111 12467799999999
Q ss_pred hCCh-hHHHHHhhc
Q 011712 95 SGNQ-HYLDYLGKN 107 (479)
Q Consensus 95 TGd~-~Yl~~~~~~ 107 (479)
|+++ +||+.+.+.
T Consensus 236 T~~~~~yl~~A~~l 249 (370)
T PF03663_consen 236 TNDEQTYLDRAEKL 249 (370)
T ss_dssp H--H-HHHHHHHHH
T ss_pred cCCccHHHHHHHHH
Confidence 9777 999988653
No 21
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=87.74 E-value=1.5 Score=45.42 Aligned_cols=85 Identities=16% Similarity=0.107 Sum_probs=55.7
Q ss_pred ChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHcc-----CCCCCCCccccccccCCCCccc--HHHHHH
Q 011712 16 GSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYR-----GKYDGSITVAQKYYRSISGYND--ELLWAA 88 (479)
Q Consensus 16 gsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~p-----g~y~~~~~~~~~~Y~s~s~~~D--E~~wAA 88 (479)
..-+.+.+.-+||.+++++.+ + ++|+.|+++++|..++- |.|....+..+......-...| -+++|.
T Consensus 51 ~~~~~ar~i~~~a~a~~~~~~--~----~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~~~g~~~~~~~~l~~~a~~l~al 124 (384)
T cd00249 51 RLWLQARQVYCFAVAYLLGWR--P----EWLEAAEHGLEYLDRHGRDPDHGGWYFALDQDGRPVDATKDLYSHAFALLAA 124 (384)
T ss_pred eEEEecHHHHHHHHHHHhcCC--h----hHHHHHHHHHHHHHHhCcCCCCCCEEEEEcCCCCCcccccchHHHHHHHHHH
Confidence 344578899999999999953 3 57899999999999861 3222111100111100001122 356899
Q ss_pred HHHHHHhCChhHHHHHhh
Q 011712 89 AWLYQASGNQHYLDYLGK 106 (479)
Q Consensus 89 aeLy~aTGd~~Yl~~~~~ 106 (479)
++||++||+..|++.+++
T Consensus 125 a~~~~at~d~~~l~~A~~ 142 (384)
T cd00249 125 AQAAKVGGDPEARALAEE 142 (384)
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 999999999999998765
No 22
>PF09624 DUF2393: Protein of unknown function (DUF2393); InterPro: IPR013417 The function of this protein is unknown. It is always found as part of a two-gene operon with IPR013416 from INTERPRO, a protein that appears to span the membrane seven times. It has so far been found in the bacteria Anabaena sp. (strain PCC 7120), Agrobacterium tumefaciens, Rhizobium meliloti, and Gloeobacter violaceus.
Probab=84.28 E-value=6.5 Score=35.47 Aligned_cols=70 Identities=21% Similarity=0.261 Sum_probs=47.2
Q ss_pred EEEEEEEEeCCCCcceeeEEEecCCCCCccccEe-cC-CeeecCCCccc-------CCCCCeEEEEEEecCC----CceE
Q 011712 405 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN-LG-NAYGFPSWLNN-------LAAGKSLEFVYIHTAN----AADV 471 (479)
Q Consensus 405 ~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~-~~-n~~~lPs~~~~-------i~~g~s~~FGyI~~~~----~a~~ 471 (479)
+-++++|+|.|.++|++..|..+-. ..-+.... .. ..+++-.+... |+||++-.|-.|.... ..++
T Consensus 64 ~~v~g~V~N~g~~~i~~c~i~~~l~-~~~~~~~n~~~~~~~~~~~f~~~~~~i~~~L~~~e~~~f~~~~~~~p~~~~~~~ 142 (149)
T PF09624_consen 64 FYVDGTVTNTGKFTIKKCKITVKLY-NDKQVSGNKFKEIFYQQIPFVKKSIPIADNLKPGESKEFRFIFPYPPYFGNYNI 142 (149)
T ss_pred EEEEEEEEECCCCEeeEEEEEEEEE-eCCCccCchhhhhhccccchhccceeHHhhcCcccceeEEEEecCCccCCCceE
Confidence 6688999999999999999988832 12222211 11 13444335444 9999999999997764 4566
Q ss_pred EEEE
Q 011712 472 SVSA 475 (479)
Q Consensus 472 ~v~~ 475 (479)
.++.
T Consensus 143 ~~~~ 146 (149)
T PF09624_consen 143 RVKS 146 (149)
T ss_pred EEEE
Confidence 6654
No 23
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=82.19 E-value=26 Score=35.12 Aligned_cols=24 Identities=25% Similarity=0.477 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCChhHHHHHhh
Q 011712 83 ELLWAAAWLYQASGNQHYLDYLGK 106 (479)
Q Consensus 83 E~~wAAaeLy~aTGd~~Yl~~~~~ 106 (479)
=.+|+-+.||++|+++.|++.+.+
T Consensus 143 Gi~~~L~~l~~~t~d~~~l~~A~~ 166 (321)
T cd04791 143 GIALFLLRLYKATGDSRYLELAEE 166 (321)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHH
Confidence 467999999999999999997764
No 24
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=82.15 E-value=9 Score=39.57 Aligned_cols=83 Identities=28% Similarity=0.213 Sum_probs=52.8
Q ss_pred ChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHcc----CC-CCCCCccccccccCCCCcccHHHHHHHH
Q 011712 16 GSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYR----GK-YDGSITVAQKYYRSISGYNDELLWAAAW 90 (479)
Q Consensus 16 gsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~p----g~-y~~~~~~~~~~Y~s~s~~~DE~~wAAae 90 (479)
....-+-+..|||.++++.. |+ ++|+.|++++++..++- +. |....+. ...+.+ .+...-++.|.++
T Consensus 113 ~l~~~a~~l~ala~~~~at~--d~----~~l~~A~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~-~~~~~h~~~all~ 184 (384)
T cd00249 113 DLYSHAFALLAAAQAAKVGG--DP----EARALAEETIDLLERRFWEDHPGAFDEADPG-TPPYRG-SNPHMHLLEAMLA 184 (384)
T ss_pred chHHHHHHHHHHHHHHHhcC--CH----HHHHHHHHHHHHHHHHhccCCCcccCCCCCC-CCCCCC-CChhHHHHHHHHH
Confidence 34456677888888888885 44 67778888888887641 22 2111111 122222 2223344678999
Q ss_pred HHHHhCChhHHHHHhh
Q 011712 91 LYQASGNQHYLDYLGK 106 (479)
Q Consensus 91 Ly~aTGd~~Yl~~~~~ 106 (479)
|+.+|||..|++.+..
T Consensus 185 l~~~tgd~~~~~~A~~ 200 (384)
T cd00249 185 AYEATGEQKYLDRADE 200 (384)
T ss_pred HHHHhCCHHHHHHHHH
Confidence 9999999999997754
No 25
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known. It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.
Probab=76.64 E-value=5.2 Score=31.85 Aligned_cols=54 Identities=26% Similarity=0.372 Sum_probs=32.8
Q ss_pred EEEEEEEEeCCCCcceeeEEEecCCCCCccccEecCCeeecCCCcccCCCCCeEEEEEEecC
Q 011712 405 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTA 466 (479)
Q Consensus 405 ~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~~~n~~~lPs~~~~i~~g~s~~FGyI~~~ 466 (479)
..+.++|+|.|..++.++.+.++-. .=|.+...+ -.++ .|+||++.++-|-.+-
T Consensus 7 ~~~~~tv~N~g~~~~~~v~~~l~~P--~GW~~~~~~--~~~~----~l~pG~s~~~~~~V~v 60 (78)
T PF10633_consen 7 VTVTLTVTNTGTAPLTNVSLSLSLP--EGWTVSASP--ASVP----SLPPGESVTVTFTVTV 60 (78)
T ss_dssp EEEEEEEE--SSS-BSS-EEEEE----TTSE---EE--EEE------B-TTSEEEEEEEEEE
T ss_pred EEEEEEEEECCCCceeeEEEEEeCC--CCccccCCc--cccc----cCCCCCEEEEEEEEEC
Confidence 5788999999999999999988842 468632222 2232 7999999999887653
No 26
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=66.60 E-value=12 Score=39.14 Aligned_cols=86 Identities=28% Similarity=0.290 Sum_probs=48.5
Q ss_pred ChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccC------CCCc-----ccHH
Q 011712 16 GSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRS------ISGY-----NDEL 84 (479)
Q Consensus 16 gsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s------~s~~-----~DE~ 84 (479)
.-|--+-.+-++-.|+.+..+- |.=..+.|+.|+++|++.... +++ ..+++|.+=. ..++ .-..
T Consensus 86 ~~DD~aw~~la~l~aye~t~~~-~~~~~~yL~~A~~i~~~~~~~---wd~-~~cgGGi~W~~~~~~~~~~~Kna~sN~~~ 160 (370)
T PF03663_consen 86 YYDDNAWWALALLRAYELTGDQ-PSDNPKYLDLAKEIFDFLISG---WDD-TSCGGGIWWSIDDTNSGYDYKNAISNGPA 160 (370)
T ss_dssp BHHHHHHHHHHHHHHHHHH--H------HHHHHHHHHHHHHHHT---B-S-GG-GS-BEEET----TEEEEEEHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHhhCCC-cchHHHHHHHHHHHHHHHHHh---cCC-ccCCCCccccccccCCCCCcccccchHHH
Confidence 3555555666666665554321 122238999999999999742 222 1223444211 0112 2367
Q ss_pred HHHHHHHHHHhCChhHHHHHhh
Q 011712 85 LWAAAWLYQASGNQHYLDYLGK 106 (479)
Q Consensus 85 ~wAAaeLy~aTGd~~Yl~~~~~ 106 (479)
+-+|+.||+.||+++||+.+++
T Consensus 161 ~~laarL~~~t~~~~Yl~~A~~ 182 (370)
T PF03663_consen 161 AQLAARLYRITGDQTYLDWAKK 182 (370)
T ss_dssp HHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHHhcCChHHHHHHHH
Confidence 8899999999999999999875
No 27
>PF01299 Lamp: Lysosome-associated membrane glycoprotein (Lamp); InterPro: IPR002000 Lysosome-associated membrane glycoproteins (lamp) [] are integral membrane proteins, specific to lysosomes, and whose exact biological function is not yet clear. Structurally, the lamp proteins consist of two internally homologous lysosome-luminal domains separated by a proline-rich hinge region; at the C-terminal extremity there is a transmembrane region (TM) followed by a very short cytoplasmic tail (C). In each of the duplicated domains, there are two conserved disulphide bonds. This structure is schematically represented in the figure below. +-----+ +-----+ +-----+ +-----+ | | | | | | | | xCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxxxCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxx +--------------------------++Hinge++--------------------------++TM++C+ In mammals, there are two closely related types of lamp: lamp-1 and lamp-2, which form major components of the lysosome membrane. In chicken lamp-1 is known as LEP100. Also included in this entry is the macrophage protein CD68 (or macrosialin) [] is a heavily glycosylated integral membrane protein whose structure consists of a mucin-like domain followed by a proline-rich hinge; a single lamp-like domain; a transmembrane region and a short cytoplasmic tail. Similar to CD68, mammalian lamp-3, which is expressed in lymphoid organs, dendritic cells and in lung, contains all the C-terminal regions but lacks the N-terminal lamp-like region []. In a lamp-family protein from nematodes [] only the part C-terminal to the hinge is conserved. ; GO: 0016020 membrane
Probab=61.95 E-value=1.5e+02 Score=30.08 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=22.9
Q ss_pred eeecCCCcccCCCCCeEEEEEEecCCCceEEEEEEEe
Q 011712 442 AYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTL 478 (479)
Q Consensus 442 ~~~lPs~~~~i~~g~s~~FGyI~~~~~a~~~v~~~~~ 478 (479)
.+.| +|. .|.+.+|.|-.....-.+++.+|.+
T Consensus 164 ~L~L-~~~----~~~~L~f~F~~~~~~~~~~L~~v~l 195 (306)
T PF01299_consen 164 TLTL-SFP----GGWNLTFTFTKNNTSNSFYLSSVSL 195 (306)
T ss_pred EEEE-eeC----CccEEEEEEEecCCCCcEEEEEEEE
Confidence 6677 332 2568999999887667788888775
No 28
>PF14796 AP3B1_C: Clathrin-adaptor complex-3 beta-1 subunit C-terminal
Probab=59.87 E-value=39 Score=30.76 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=45.7
Q ss_pred CCceEEEEeeecccccCCeEEEEEEEEEEeCCCCcceeeEEEecCCCCCccccEecCCeeecCCCcccCCCCCeEE
Q 011712 384 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 459 (479)
Q Consensus 384 ~~~~~i~q~~~~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~~~n~~~lPs~~~~i~~g~s~~ 459 (479)
..-+.|.+...-+=.-....+.-++++++|++..+|++|.|+-.++...+ . ...||-- ..|.||++.+
T Consensus 66 G~GL~v~Y~F~RqP~~~s~~mvsIql~ftN~s~~~i~~I~i~~k~l~~g~---~----i~~F~~I-~~L~pg~s~t 133 (145)
T PF14796_consen 66 GKGLSVEYRFSRQPSLYSPSMVSIQLTFTNNSDEPIKNIHIGEKKLPAGM---R----IHEFPEI-ESLEPGASVT 133 (145)
T ss_pred CCceeEEEEEccCCcCCCCCcEEEEEEEEecCCCeecceEECCCCCCCCc---E----eeccCcc-cccCCCCeEE
Confidence 45677887776644434445788999999999999999999877642111 1 1223322 4688888865
No 29
>PF03173 CHB_HEX: Putative carbohydrate binding domain; InterPro: IPR004866 This domain represents the N-terminal domain in chitobiases and beta-hexosaminidases 3.2.1.52 from EC. Chitobiases degrade chitin, which forms the exoskeleton in insects and crustaceans, and which is one of the most abundant polysaccharides on earth []. Beta-hexosaminidases are composed of either a HexA/HexB heterodimer or a HexB homodimer, and can hydrolyse diverse substrates, including GM(2)-gangliosides; mutations in this enzyme are associated with Tay-Sachs disease []. HexB is structurally similar to chitobiase, consisting of a beta sandwich structure; this structure is similar to that found in the cellulose-binding domain of cellulase from Cellulomonas fimi (IPR001919 from INTERPRO), suggesting that it may function as a carbohydrate-binding domain.; GO: 0030246 carbohydrate binding; PDB: 1C7T_A 1QBA_A 1QBB_A 1C7S_A.
Probab=59.60 E-value=55 Score=30.35 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=36.3
Q ss_pred EEEEEEEEEEeCCCCcce--eeEEEecCCCCCcc-------ccEe-cCC--eeecCCCcccCCCCCeEEEEEEecC----
Q 011712 403 RYYRYSTIVTNKSAKTLK--NLKLSISKLYGPLW-------GLTN-LGN--AYGFPSWLNNLAAGKSLEFVYIHTA---- 466 (479)
Q Consensus 403 ~y~q~~v~i~N~~~~~i~--~~~i~~~~~~~~iW-------~v~~-~~n--~~~lPs~~~~i~~g~s~~FGyI~~~---- 466 (479)
.-+..+++++|++..++. +|.|.++.+ .+|= .|+. .|+ .++.=.=...|+||+++++=|+.+.
T Consensus 30 ~c~~~~ltl~n~~~~~~~~~dW~IYf~~i-r~i~~~~s~~f~i~hinGDl~kl~Pt~~F~gl~~Ges~~I~~~~~~w~~~ 108 (164)
T PF03173_consen 30 SCFRAELTLTNPGDAPLPKSDWAIYFSSI-RPILQVDSDQFKITHINGDLHKLTPTAGFKGLAPGESLEIPFVGEYWQVS 108 (164)
T ss_dssp -EEEEEEEEEE-SS-B------EEEEE-S-S-EEEESSTTEEEEE-STTEEEEEE-TT---B-TTEEEEEEEEEES---S
T ss_pred cceEEEEEEEcCCCccCCCCCeEEEEecc-eeeeccCCCCeEEEEEcCeEEEEeECCCCCccCCCCEEEEEEEccccEEE
Confidence 347899999999998875 499988853 2322 2233 555 3332222257999999999999655
Q ss_pred --C-CceEEEE
Q 011712 467 --N-AADVSVS 474 (479)
Q Consensus 467 --~-~a~~~v~ 474 (479)
. +++++|.
T Consensus 109 ~tD~mp~~Yv~ 119 (164)
T PF03173_consen 109 ETDAMPGWYVV 119 (164)
T ss_dssp GGGS----EEE
T ss_pred EccCCCceEEE
Confidence 2 6666664
No 30
>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins. The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=56.21 E-value=83 Score=29.61 Aligned_cols=76 Identities=12% Similarity=0.327 Sum_probs=52.3
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCCcceeeEEEecCCCCCccccEecCC-eeecCCCcccCCCCCeEEEEEE
Q 011712 385 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGN-AYGFPSWLNNLAAGKSLEFVYI 463 (479)
Q Consensus 385 ~~~~i~q~~~~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~~~n-~~~lPs~~~~i~~g~s~~FGyI 463 (479)
..|-+.-.+.+.-.-.|++ ..++++|.|.|..+..+++|.-+.....-+.+. +|. ..+ | ..|+||++.+.-|+
T Consensus 21 a~llv~K~il~~~~v~g~~-v~V~~~iyN~G~~~A~dV~l~D~~fp~~~F~lv-sG~~s~~---~-~~i~pg~~vsh~~v 94 (181)
T PF05753_consen 21 ARLLVSKQILNKYLVEGED-VTVTYTIYNVGSSAAYDVKLTDDSFPPEDFELV-SGSLSAS---W-ERIPPGENVSHSYV 94 (181)
T ss_pred cEEEEEEeeccccccCCcE-EEEEEEEEECCCCeEEEEEEECCCCCccccEec-cCceEEE---E-EEECCCCeEEEEEE
Confidence 3466666667777654433 567899999999999999996654444566552 332 222 2 68999999998888
Q ss_pred ecC
Q 011712 464 HTA 466 (479)
Q Consensus 464 ~~~ 466 (479)
.+.
T Consensus 95 v~p 97 (181)
T PF05753_consen 95 VRP 97 (181)
T ss_pred Eee
Confidence 554
No 31
>TIGR01451 B_ant_repeat conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.
Probab=54.81 E-value=19 Score=26.66 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=19.8
Q ss_pred EEEEEEEEEeCCCCcceeeEEEe
Q 011712 404 YYRYSTIVTNKSAKTLKNLKLSI 426 (479)
Q Consensus 404 y~q~~v~i~N~~~~~i~~~~i~~ 426 (479)
-.+|.++|+|+|..+.+++.|.-
T Consensus 13 ~v~Yti~v~N~g~~~a~~v~v~D 35 (53)
T TIGR01451 13 TITYTITVTNNGNVPATNVVVTD 35 (53)
T ss_pred EEEEEEEEEECCCCceEeEEEEE
Confidence 37899999999999999888853
No 32
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=54.70 E-value=35 Score=37.38 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHH
Q 011712 22 ETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYL 101 (479)
Q Consensus 22 ~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~~DE~~wAAaeLy~aTGd~~Yl 101 (479)
.+-.+|-..++.-.+ +++|+.|+++-+|....-..+... +.....+. ++ -++..+-++||+.|||++||
T Consensus 129 ~ll~gl~~~y~~tG~------~~~L~v~~k~ad~~~~~~~~~~~~-~~~~~~~~---~~-~~i~~~l~~LY~~Tgd~~yL 197 (520)
T PF07944_consen 129 KLLEGLIDYYEATGN------ERALDVATKLADWVYRRLSRLGPE-PGQKMGYP---EH-GGINEALVRLYEITGDERYL 197 (520)
T ss_pred HHHHHHHHHHHHHCc------HHHHHHHHHHHHHHHHHhccCCHH-Hhhccccc---cc-chHHHHHHHHHHHhCCHHHH
Confidence 344455555555443 589999999999883321222111 10111111 12 36678999999999999999
Q ss_pred HHHhhcC
Q 011712 102 DYLGKNG 108 (479)
Q Consensus 102 ~~~~~~~ 108 (479)
+.++...
T Consensus 198 ~lA~~f~ 204 (520)
T PF07944_consen 198 DLAEYFV 204 (520)
T ss_pred HHHHHHH
Confidence 9876543
No 33
>PF11611 DUF4352: Domain of unknown function (DUF4352); InterPro: IPR021652 This entry is represented by Bacteriophage A118, Gp32. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry represents a group of putative lipoproteins of unknown function.; PDB: 3CFU_A.
Probab=54.00 E-value=74 Score=26.89 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=34.3
Q ss_pred ccccc--CCeEEEEEEEEEEeCCCCcce----eeEEEecCCCCCccccEecCCeeecCCCcccCCCCCeEEEEEE--ecC
Q 011712 395 TSWIS--NGKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYI--HTA 466 (479)
Q Consensus 395 ~sW~~--~~~~y~q~~v~i~N~~~~~i~----~~~i~~~~~~~~iW~v~~~~n~~~lPs~~~~i~~g~s~~FGyI--~~~ 466 (479)
+.+.. .+..|..++|+|+|++..++. ++.|..++ -..+. .+.......-+.....|+||++.+.-.+ ...
T Consensus 26 ~~~~~~~~g~~fv~v~v~v~N~~~~~~~~~~~~f~l~d~~-g~~~~-~~~~~~~~~~~~~~~~i~pG~~~~g~l~F~vp~ 103 (123)
T PF11611_consen 26 NEYSKPKEGNKFVVVDVTVKNNGDEPLDFSPSDFKLYDSD-GNKYD-PDFSASSNDNDLFSETIKPGESVTGKLVFEVPK 103 (123)
T ss_dssp S-BEES---SEEEEEEEEEEE-SSS-EEEEGGGEEEE-TT---B---EEE-CCCTTTB--EEEE-TT-EEEEEEEEEEST
T ss_pred ccccccCCCCEEEEEEEEEEECCCCcEEecccceEEEeCC-CCEEc-ccccchhccccccccEECCCCEEEEEEEEEECC
Confidence 45553 468899999999999998764 23333222 11122 1111100000023467999999876554 433
Q ss_pred C--CceEEE
Q 011712 467 N--AADVSV 473 (479)
Q Consensus 467 ~--~a~~~v 473 (479)
. +..|.+
T Consensus 104 ~~~~~~l~~ 112 (123)
T PF11611_consen 104 DDKPYTLEY 112 (123)
T ss_dssp T-GG-EEEE
T ss_pred CCccEEEEE
Confidence 3 345544
No 34
>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins.; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.
Probab=53.29 E-value=1.1e+02 Score=24.43 Aligned_cols=52 Identities=15% Similarity=0.182 Sum_probs=30.8
Q ss_pred EEEEEEEEeCCCCcceeeEEEecCCCCCccccEecCCeeecCCCcccCCCCCeEEEEEEecCC
Q 011712 405 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTAN 467 (479)
Q Consensus 405 ~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~~~n~~~lPs~~~~i~~g~s~~FGyI~~~~ 467 (479)
.++.++|+|.|..+..++.+.+---...+ ....+ ..|.||++.+|-|.....
T Consensus 21 ~~i~~~V~N~G~~~~~~~~v~~~~~~~~~-------~~~~i----~~L~~g~~~~v~~~~~~~ 72 (101)
T PF07705_consen 21 VTITVTVKNNGTADAENVTVRLYLDGNSV-------STVTI----PSLAPGESETVTFTWTPP 72 (101)
T ss_dssp EEEEEEEEE-SSS-BEEEEEEEEETTEEE-------EEEEE----SEB-TTEEEEEEEEEE-S
T ss_pred EEEEEEEEECCCCCCCCEEEEEEECCcee-------ccEEE----CCcCCCcEEEEEEEEEeC
Confidence 67889999999999998888764201111 11111 467788887777775543
No 35
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=51.84 E-value=50 Score=33.67 Aligned_cols=30 Identities=23% Similarity=0.650 Sum_probs=21.2
Q ss_pred CcccHHHH-HHHHHHHHhCChhHHHHHhhcC
Q 011712 79 GYNDELLW-AAAWLYQASGNQHYLDYLGKNG 108 (479)
Q Consensus 79 ~~~DE~~w-AAaeLy~aTGd~~Yl~~~~~~~ 108 (479)
+|..=.+| +..++|..|||+.|++.+++..
T Consensus 24 ~W~~G~~~~gl~~~~~~tgd~~~~~~a~~~~ 54 (336)
T PF07470_consen 24 DWTNGVFWYGLLEAYEYTGDERYLDYAERWA 54 (336)
T ss_dssp SHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred CcChhhHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 46666444 7778999999999999887644
No 36
>cd04792 LanM-like LanM-like proteins. LanM is a bifunctional enzyme, involved in the synthesis of class II lantibiotics. It is responsible for both the dehydration and the cyclization of the precursor-peptide during lantibiotic synthesis. The C-terminal domain shows similarity to LanC, the cyclase component of the lan operon, but the N terminus seems to be unrelated to the dehydratase, LanB.
Probab=50.33 E-value=2.7e+02 Score=32.17 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhH
Q 011712 21 GETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHY 100 (479)
Q Consensus 21 ~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~~DE~~wAAaeLy~aTGd~~Y 100 (479)
+.+|-.|+..+++.. |+.|.+.+.+..+.+....+..... ....++|...+ -.+++...|++.|+++.|
T Consensus 494 aGIal~l~~l~~~t~--~~~~~~~a~~~l~~l~~~~~~~~~~-----~~~~gl~~G~a----Gi~~~L~~l~~~~~~~~~ 562 (825)
T cd04792 494 AGIALFLAYLGQLTG--DERYTRLARKILDSLVKSLSELKTD-----DTGIGAFSGLG----GILYALTHLGKLLKDDRL 562 (825)
T ss_pred HHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHhccccc-----ccCceeEechh----HHHHHHHHHHHHcCCHHH
Confidence 456666666677764 4555444444444444444332110 01223443223 357888999999999999
Q ss_pred HHHHhh
Q 011712 101 LDYLGK 106 (479)
Q Consensus 101 l~~~~~ 106 (479)
++.+..
T Consensus 563 ~~~a~~ 568 (825)
T cd04792 563 LNLAKE 568 (825)
T ss_pred HHHHHH
Confidence 887765
No 37
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.25 E-value=27 Score=34.50 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHH
Q 011712 22 ETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFA 56 (479)
Q Consensus 22 ~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a 56 (479)
+.|-+.+-|+.-||..||+-|.+||++|+++|.--
T Consensus 72 Daat~YveA~~cykk~~~~eAv~cL~~aieIyt~~ 106 (288)
T KOG1586|consen 72 DAATTYVEAANCYKKVDPEEAVNCLEKAIEIYTDM 106 (288)
T ss_pred hHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHhh
Confidence 36677888999999999999999999999999743
No 38
>KOG4056 consensus Translocase of outer mitochondrial membrane complex, subunit TOM20 [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.45 E-value=39 Score=30.44 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=32.9
Q ss_pred ChhHHHHHHHHHHHHhhhccC----CCHHHHHHHHHHHHHHHHH
Q 011712 16 GSDLAGETAAAMAAASIVFRH----SDPAYSSELLRHAYQLFDF 55 (479)
Q Consensus 16 gsd~t~~~AAalA~Asrvfk~----~D~~yA~~~L~~A~~ay~~ 55 (479)
.+-+++.+|+++++++-+|-+ .||.|.+++.++.++--.-
T Consensus 10 ~~vI~agiag~af~gYciYFd~KRrsdP~fk~~lr~rrk~q~~a 53 (143)
T KOG4056|consen 10 TSVIAAGIAGLAFIGYCIYFDKKRRSDPDFKKKLRERRKKQASA 53 (143)
T ss_pred hHHHHHHHHHHHHHHHHhhcccccccChhHHHHHHHHHHHHhhc
Confidence 466788899999999999865 4999999999999886543
No 39
>PF04379 DUF525: Protein of unknown function (DUF525); InterPro: IPR007474 This domain is found in the bacterial protein ApaG and at the C termini of some F-box proteins (IPR001810 from INTERPRO). F-box proteins contain a carboxy-terminal domain that interacts with protein substrates []. The ApaG domain is ~125 amino acids in length, and is named after the bacterial ApaG protein, of which it forms the core. The Salmonella typhimurium ApaG domain protein, CorD, is involved in Co(2+) resistance and Mg(2+) efflux. Tertiary structures from different ApaG proteins show a fold of several beta-sheets. The ApaG domain may be involved in protein-protein interactions which could be implicated in substrate-specificity [, , ].; PDB: 2F1E_A 1XVS_A 1TZA_A 1XQ4_D.
Probab=40.60 E-value=78 Score=26.31 Aligned_cols=19 Identities=16% Similarity=0.406 Sum_probs=14.8
Q ss_pred CeEEEEEEEEEEeCCCCcc
Q 011712 401 GKRYYRYSTIVTNKSAKTL 419 (479)
Q Consensus 401 ~~~y~q~~v~i~N~~~~~i 419 (479)
.+-++.|.|+|+|.+..+|
T Consensus 10 ~~y~f~Y~I~I~N~~~~~v 28 (90)
T PF04379_consen 10 NRYVFAYRIRIENHSDESV 28 (90)
T ss_dssp TBEEEEEEEEEEE-SSS-E
T ss_pred CeEEEEEEEEEEECCCCCE
Confidence 4678899999999999876
No 40
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=37.78 E-value=55 Score=33.46 Aligned_cols=83 Identities=22% Similarity=0.179 Sum_probs=50.9
Q ss_pred ChhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHcc-----CCCCCCCccccccccCCCCcccHH-HHHHH
Q 011712 16 GSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYR-----GKYDGSITVAQKYYRSISGYNDEL-LWAAA 89 (479)
Q Consensus 16 gsd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~p-----g~y~~~~~~~~~~Y~s~s~~~DE~-~wAAa 89 (479)
..-+.+...=++|.|++ +. +|+ +|+.|++.++|..++= |.|.......+..=.....|.+-+ +.|.+
T Consensus 19 ~~~~q~R~~~~fa~a~~-~g--~~~----~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~~~~~~~~~~~~Y~~af~l~ala 91 (346)
T PF07221_consen 19 RLWVQARQLYTFARAYR-LG--RPE----YLELAEHGFDFLRKHFRDPEYGGWYRSLDDGGPLDPQKDLYDQAFALLALA 91 (346)
T ss_dssp EHHHHHHHHHHHHHHHH-TT--SHH----HHHHHHHHHHHHHHTTBTTTTSSBSSEEETTEEEE--EEHHHHHHHHHHHH
T ss_pred eeeeeHHHHHHHHHHHh-cC--chh----HHHHHHHHHHHHHHhcccCCCCCEEEEeCCCCCCccccchHHHHHHHHHHH
Confidence 56678999999999999 64 554 7888999999999862 222111111110000001122233 35667
Q ss_pred HHHHHhCChhHHHHHhh
Q 011712 90 WLYQASGNQHYLDYLGK 106 (479)
Q Consensus 90 eLy~aTGd~~Yl~~~~~ 106 (479)
+ +++||+..|++.+.+
T Consensus 92 ~-~~~tg~~~~~~~A~~ 107 (346)
T PF07221_consen 92 E-ARATGDPEALELAEQ 107 (346)
T ss_dssp H-HHCTT-TTHHHHHHH
T ss_pred H-HHHhCChhHHHHHHH
Confidence 7 899999999998754
No 41
>COG1470 Predicted membrane protein [Function unknown]
Probab=35.90 E-value=63 Score=34.87 Aligned_cols=51 Identities=18% Similarity=0.289 Sum_probs=38.2
Q ss_pred EEEEEEEEeCCCCcceeeEEEecCCCCCccccEecCCeeecCCCcccCCCCCeEEEEEE
Q 011712 405 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYI 463 (479)
Q Consensus 405 ~q~~v~i~N~~~~~i~~~~i~~~~~~~~iW~v~~~~n~~~lPs~~~~i~~g~s~~FGyI 463 (479)
....+.|.|.|+-+++++.|.++.. |=|.++..++ +.| +|.||++-+----
T Consensus 399 ~~i~i~I~NsGna~LtdIkl~v~~P--qgWei~Vd~~--~I~----sL~pge~~tV~lt 449 (513)
T COG1470 399 KTIRISIENSGNAPLTDIKLTVNGP--QGWEIEVDES--TIP----SLEPGESKTVSLT 449 (513)
T ss_pred ceEEEEEEecCCCccceeeEEecCC--ccceEEECcc--ccc----ccCCCCcceEEEE
Confidence 3567899999999999999999974 3399977655 333 5778877665443
No 42
>PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway. To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. Trs120 is a subunit specific to the TRAPP II complex [] along with Trs65p and Trs130p(TRAPPC10). It is suggested that Trs120p is required for the stability of the Trs130p subunit, suggesting that these two proteins might interact in some way []. It is likely that there is a complex function for TRAPP II in multiple pathways [].
Probab=35.07 E-value=1.8e+02 Score=35.52 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=41.8
Q ss_pred EEEEEEEEEeCCCCcceeeEEEecCC-CCC-----ccccEecCC-------eeecCC--Cc--ccCCCCCeEEEEEEecC
Q 011712 404 YYRYSTIVTNKSAKTLKNLKLSISKL-YGP-----LWGLTNLGN-------AYGFPS--WL--NNLAAGKSLEFVYIHTA 466 (479)
Q Consensus 404 y~q~~v~i~N~~~~~i~~~~i~~~~~-~~~-----iW~v~~~~n-------~~~lPs--~~--~~i~~g~s~~FGyI~~~ 466 (479)
-.++.|+++|.|..+|..+.|.+.+. ..+ .|.--.... ...+|. |. ..|+||++.+|-+-..+
T Consensus 800 ~~~~~ItL~N~S~~pvd~l~~sf~DS~~~~~~~~l~~k~l~~~e~yelE~~l~~~~~~~i~~~~~I~Pg~~~~~~~~~~~ 879 (1185)
T PF08626_consen 800 KQTFTITLRNTSSVPVDFLSFSFQDSTIEPLQKALSNKDLSPDELYELEWQLFKLPAFRILNKPPIPPGESATFTVEVDG 879 (1185)
T ss_pred EEEEEEEEEECCccccceEEEEEEeccHHHHhhhhhcccCChhhhhhhhhhhhcCcceeecccCccCCCCEEEEEEEecC
Confidence 47899999999999999999987731 100 121100000 112332 11 17999999999998766
Q ss_pred CCc
Q 011712 467 NAA 469 (479)
Q Consensus 467 ~~a 469 (479)
.+.
T Consensus 880 ~~~ 882 (1185)
T PF08626_consen 880 KPG 882 (1185)
T ss_pred ccc
Confidence 544
No 43
>PF01345 DUF11: Domain of unknown function DUF11; InterPro: IPR001434 This group of sequences is represented by a conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis (Streptococcus faecalis), and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydia trachomatis outer membrane proteins. In C. trachomatis, three cysteine-rich proteins (also believed to be lipoproteins), MOMP, OMP6 and OMP3, make up the extracellular matrix of the outer membrane []. They are involved in the essential structural integrity of both the elementary body (EB) and recticulate body (RB) phase. They are thought to be involved in porin formation and, as these bacteria lack the peptidoglycan layer common to most Gram-negative microbes, such proteins are highly important in the pathogenicity of the organism.; GO: 0005727 extrachromosomal circular DNA
Probab=35.01 E-value=53 Score=25.68 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=28.2
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCCcceeeEEEe
Q 011712 385 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSI 426 (479)
Q Consensus 385 ~~~~i~q~~~~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~ 426 (479)
..+.++.....+...=|+ -..|.++|+|.|+.+..++.|.-
T Consensus 24 ~~~~~~k~~~~~~~~~Gd-~v~ytitvtN~G~~~a~nv~v~D 64 (76)
T PF01345_consen 24 PDLSITKTVNPSTANPGD-TVTYTITVTNTGPAPATNVVVTD 64 (76)
T ss_pred CCEEEEEecCCCcccCCC-EEEEEEEEEECCCCeeEeEEEEE
Confidence 456666555555543232 36799999999999999987743
No 44
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=33.96 E-value=1.9e+02 Score=31.71 Aligned_cols=64 Identities=22% Similarity=0.372 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCccc---ccc---ccC--CCCc-----ccHHHHHHHHHHHHhCChhHHHHHhh
Q 011712 43 SELLRHAYQLFDFADKYRGKYDGSITVA---QKY---YRS--ISGY-----NDELLWAAAWLYQASGNQHYLDYLGK 106 (479)
Q Consensus 43 ~~~L~~A~~ay~~a~~~pg~y~~~~~~~---~~~---Y~s--~s~~-----~DE~~wAAaeLy~aTGd~~Yl~~~~~ 106 (479)
++++++++.+|+....+...-....... ..| |.. +..+ .=+++.=+-.|++.|||.+|.|.+++
T Consensus 253 ~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E~f~~~~~lp~~~~~~EtCas~~~~~~~~~L~~~tgd~~yaD~~Er 329 (520)
T PF07944_consen 253 EEYLDAAENFWDNVVRHHMYATGGIGSDHEGEHFGPPYDLPNRLAYAETCASVNMMKLARRLFRLTGDARYADYYER 329 (520)
T ss_pred HHHHHHHHHHHHHHHhcCeeccCCCcCCCCCccCCCCCCCCcCCCCccccHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 4789999999999887643211111111 111 110 0000 12677778889999999999999876
No 45
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=33.85 E-value=89 Score=25.37 Aligned_cols=58 Identities=17% Similarity=0.243 Sum_probs=26.4
Q ss_pred EEEEEEEEeCCCCcceeeEEEecC----------C-CCCccccEecCC-eeecCCCcccCCCCCeEEEEEEecCC
Q 011712 405 YRYSTIVTNKSAKTLKNLKLSISK----------L-YGPLWGLTNLGN-AYGFPSWLNNLAAGKSLEFVYIHTAN 467 (479)
Q Consensus 405 ~q~~v~i~N~~~~~i~~~~i~~~~----------~-~~~iW~v~~~~n-~~~lPs~~~~i~~g~s~~FGyI~~~~ 467 (479)
..+.++|+|++.++| +|.+.. . -.-+|-- +.+ .++---=...|+||++.+|-......
T Consensus 2 v~~~l~v~N~s~~~v---~l~f~sgq~~D~~v~d~~g~~vwrw--S~~~~FtQal~~~~l~pGe~~~~~~~~~~~ 71 (82)
T PF12690_consen 2 VEFTLTVTNNSDEPV---TLQFPSGQRYDFVVKDKEGKEVWRW--SDGKMFTQALQEETLEPGESLTYEETWDLK 71 (82)
T ss_dssp EEEEEEEEE-SSS-E---EEEESSS--EEEEEE-TT--EEEET--TTT-------EEEEE-TT-EEEEEEEESS-
T ss_pred EEEEEEEEeCCCCeE---EEEeCCCCEEEEEEECCCCCEEEEe--cCCchhhheeeEEEECCCCEEEEEEEECCC
Confidence 356788999998765 233221 0 1225521 222 33321112469999999998775543
No 46
>KOG3865 consensus Arrestin [Signal transduction mechanisms]
Probab=32.19 E-value=43 Score=34.27 Aligned_cols=44 Identities=27% Similarity=0.412 Sum_probs=31.4
Q ss_pred CCceEEEEeeecccccCCeEEEEEEEEEEeCCCCcceeeEEEecC
Q 011712 384 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK 428 (479)
Q Consensus 384 ~~~~~i~q~~~~sW~~~~~~y~q~~v~i~N~~~~~i~~~~i~~~~ 428 (479)
...+.+.-++...--..|. -.-++|.|+|+++++||.|++.+..
T Consensus 192 ~~~lhLevsLDkEiYyHGE-~isvnV~V~NNsnKtVKkIK~~V~Q 235 (402)
T KOG3865|consen 192 DGPLHLEVSLDKEIYYHGE-PISVNVHVTNNSNKTVKKIKISVRQ 235 (402)
T ss_pred CCceEEEEEecchheecCC-ceeEEEEEecCCcceeeeeEEEeEe
Confidence 4566666666444433332 2678999999999999999997774
No 47
>PF05750 Rubella_Capsid: Rubella capsid protein; InterPro: IPR008819 Rubella virus is an enveloped positive-strand RNA virus of the family Togaviridae. Virions are composed of three structural proteins: a capsid and two membrane-spanning glycoproteins, E2 and E1. During virus assembly, the capsid interacts with genomic RNA to form nucleocapsids. It has been discovered that capsid phosphorylation serves to negatively regulate binding of viral genomic RNA. This may delay the initiation of nucleocapsid assembly until sufficient amounts of virus glycoproteins accumulate at the budding site and/or prevent non-specific binding to cellular RNA when levels of genomic RNA are low. It follows that at a late stage in replication, the capsid may undergo dephosphorylation before nucleocapsid assembly occurs []. This family is found together with IPR008820 from INTERPRO and IPR008821 from INTERPRO.; GO: 0016021 integral to membrane, 0019013 viral nucleocapsid
Probab=32.11 E-value=49 Score=31.09 Aligned_cols=25 Identities=28% Similarity=0.506 Sum_probs=20.5
Q ss_pred ccccC-CeEEEEEEEEEEeCCCCcce
Q 011712 396 SWISN-GKRYYRYSTIVTNKSAKTLK 420 (479)
Q Consensus 396 sW~~~-~~~y~q~~v~i~N~~~~~i~ 420 (479)
-|.+| |..||.++..++|.|.-++.
T Consensus 158 lwsegegavfyrvdlhftnlgtppld 183 (300)
T PF05750_consen 158 LWSEGEGAVFYRVDLHFTNLGTPPLD 183 (300)
T ss_pred hhccCCceeEEEeeeeeccCCCCCCC
Confidence 35566 78999999999999987764
No 48
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.06 E-value=39 Score=36.73 Aligned_cols=26 Identities=38% Similarity=0.528 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHHHhCChhHHHHHhhc
Q 011712 82 DELLWAAAWLYQASGNQHYLDYLGKN 107 (479)
Q Consensus 82 DE~~wAAaeLy~aTGd~~Yl~~~~~~ 107 (479)
-|+..|-++||+.|||++||+-+...
T Consensus 181 ~eielAl~~Ly~~Tg~~rYL~LA~~F 206 (589)
T COG3533 181 PEIELALAELYRLTGDQRYLDLARRF 206 (589)
T ss_pred CchhHHHHHHHHHhcChHHHHHHHHH
Confidence 38889999999999999999976553
No 49
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=30.15 E-value=4.7e+02 Score=26.50 Aligned_cols=28 Identities=18% Similarity=0.342 Sum_probs=21.4
Q ss_pred CChHHHHHHHHhccccccCC--CCCCceeE
Q 011712 219 VAPAELLGFAKSQVDYILGD--NPRATSYM 246 (479)
Q Consensus 219 ~~~~~y~~~a~~qidYiLG~--Np~~~SyV 246 (479)
....+|++.|.+.++.|+.+ ++-|..-|
T Consensus 268 ~d~~~y~~~a~~a~~~l~~~~~~~dG~~~~ 297 (336)
T PF07470_consen 268 LDPEEYRPAAEKALEALLSNAIDPDGKLGL 297 (336)
T ss_dssp STHHHHHHHHHHHHHHHHHCEB-TTSSSBB
T ss_pred CccHHHHHHHHHHHHHHHhCccCCCCCeEE
Confidence 45789999999999999998 66555433
No 50
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins. A major virulence determinant of the plant-pathogenic enterobacterium Erwinia chrysanthemi is the production of pectate lyase enzymes that degrade plant cell walls [].; GO: 0016837 carbon-oxygen lyase activity, acting on polysaccharides, 0045490 pectin catabolic process, 0005737 cytoplasm; PDB: 2V8J_A 2V8K_A 2V8I_A.
Probab=29.71 E-value=46 Score=36.16 Aligned_cols=24 Identities=38% Similarity=0.549 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhCChhHHHHHhh
Q 011712 83 ELLWAAAWLYQASGNQHYLDYLGK 106 (479)
Q Consensus 83 E~~wAAaeLy~aTGd~~Yl~~~~~ 106 (479)
=++.|++|||++|++..|++.+..
T Consensus 441 ~~L~allEL~~atq~~~~l~lA~~ 464 (557)
T PF06917_consen 441 YLLFALLELYQATQDARYLELADQ 464 (557)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 356799999999999999998754
No 51
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=28.83 E-value=59 Score=33.21 Aligned_cols=81 Identities=35% Similarity=0.419 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHc---c--CCCCCCCcc-ccccccCCCCccc--HHHHHH
Q 011712 17 SDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKY---R--GKYDGSITV-AQKYYRSISGYND--ELLWAA 88 (479)
Q Consensus 17 sd~t~~~AAalA~Asrvfk~~D~~yA~~~L~~A~~ay~~a~~~---p--g~y~~~~~~-~~~~Y~s~s~~~D--E~~wAA 88 (479)
.++=.++-+.||+|. ...--|+ +.++.|++++++.+++ | +.|....+. .... . ...+ -++-|.
T Consensus 78 ~~~Y~~af~l~ala~-~~~tg~~----~~~~~A~~~~~~l~~~~~d~~~g~~~~~~~~~~~~~-r---~~n~~mhl~eA~ 148 (346)
T PF07221_consen 78 KDLYDQAFALLALAE-ARATGDP----EALELAEQTLEFLERRFWDPEGGGYRESFDPDWSPP-R---GQNPHMHLLEAF 148 (346)
T ss_dssp EEHHHHHHHHHHHHH-HHCTT-T----THHHHHHHHHHHHHHHTEETTTTEE--EETTTSSCB-E---EHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHH-HHHhCCh----hHHHHHHHHHHHHHHHhcccccCcceeccCCccccC-C---CCChhHHHHHHH
Confidence 344444555555554 3222344 5578889999998875 2 112111000 0000 0 1123 456799
Q ss_pred HHHHHHhCChhHHHHHhh
Q 011712 89 AWLYQASGNQHYLDYLGK 106 (479)
Q Consensus 89 aeLy~aTGd~~Yl~~~~~ 106 (479)
+.|+++|++..|++.+.+
T Consensus 149 l~l~~~~~~~~~~~~a~~ 166 (346)
T PF07221_consen 149 LALYEATGDPRYLDRAEE 166 (346)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCHHHHHHHHH
Confidence 999999999999998765
No 52
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=26.35 E-value=6.4e+02 Score=24.92 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhCChhHHHHHhhcCCCCCCCCCCccccCCCcchHHHHHHH
Q 011712 83 ELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLV 134 (479)
Q Consensus 83 E~~wAAaeLy~aTGd~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~ll 134 (479)
=++++-..|++.|+|+.|++.+.+..+......| ..++|-....|...++
T Consensus 201 Gi~~~l~~l~~~~~d~~~~~~a~~~~~~~~~~~~--~~~~lchG~~G~~~~l 250 (321)
T cd04791 201 GLGLLMLRLEAITGDKRWRDEADGIAHAALSSCY--ANPGLFSGTAGLGAHL 250 (321)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhc--cCccccCCcHhHHHHH
Confidence 4577888999999999999987664332211111 2345555556665433
No 53
>COG3353 FlaF Putative archaeal flagellar protein F [Cell motility and secretion]
Probab=20.93 E-value=3.2e+02 Score=24.38 Aligned_cols=23 Identities=9% Similarity=0.210 Sum_probs=16.7
Q ss_pred EEEEEEEEeCCCCcce--eeEEEec
Q 011712 405 YRYSTIVTNKSAKTLK--NLKLSIS 427 (479)
Q Consensus 405 ~q~~v~i~N~~~~~i~--~~~i~~~ 427 (479)
.+++|+|+|+|+..+. .+.+-++
T Consensus 65 s~~~Vn~tnnGSt~~~~sk~dVL~n 89 (137)
T COG3353 65 STVNVNITNNGSTVFNPSKFDVLFN 89 (137)
T ss_pred cEEEEEEEeCCeEEEcccceeEEEc
Confidence 6899999999987654 4444444
No 54
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms]
Probab=20.71 E-value=3e+02 Score=32.28 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=56.5
Q ss_pred CCChhHHHHHHHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHccCCCCCCCccccccccCCCCcccHHHHHHHHHH
Q 011712 14 NPGSDLAGETAAAMAAASIVFRHSD-PAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLY 92 (479)
Q Consensus 14 ~pgsd~t~~~AAalA~Asrvfk~~D-~~yA~~~L~~A~~ay~~a~~~pg~y~~~~~~~~~~Y~s~s~~~DE~~wAAaeLy 92 (479)
+..+|.....|.++-.-=++||.+| |.+=+..+.-++.+++-...+- .+. +-.++ ++.=.+-.+.+-+.||
T Consensus 735 ~~~~d~i~Gl~g~i~~L~~iYk~~~epk~l~~ais~~~~l~~~~v~~d----~s~---~~l~g-fshg~sgi~~tL~~ly 806 (963)
T COG4403 735 SKDPDFINGLAGVICVLVSIYKLTDEPKFLELAISLGRILMEKIVGND----SSE---TVLLG-FSHGASGIILTLLKLY 806 (963)
T ss_pred ccCcchhhccHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHhhccc----ccc---ceecc-cccchHHHHHHHHHHH
Confidence 4457777777887777777888876 5555555555555555444431 111 12222 2334577899999999
Q ss_pred HHhCChhHHHHHhhc
Q 011712 93 QASGNQHYLDYLGKN 107 (479)
Q Consensus 93 ~aTGd~~Yl~~~~~~ 107 (479)
.+|||++|++++...
T Consensus 807 ~~T~e~~l~~~i~e~ 821 (963)
T COG4403 807 EATGEESLLKKIKEL 821 (963)
T ss_pred HhcCcHHHHHHHHHH
Confidence 999999999988764
Done!